FvH4_7g13830

Acyclic terpene utilisation family protein AtuA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0002235
Physical Location & Seq
Forward (+)
12335089 .. 12340947
5859 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g13830.t11

Sequence Viewer

Length: 1965 bp
ATGGATATACATGAAGGAGGTGTAATTCGCAATTGTGTGATCAAGCTGAGGGAGGATTGTAAAAAGAGAAGGGACAAGGTTTATGTTGGCTGTGGAGCCGGTTTTGGAGGTGACAGGCCTTTGGCTGCTCTTAAGTTGCTGCAGAGAGTCAAAGAGCTCAACTATATCGTGCTTGAATGCCTTGCGGAGCGCACCCTTGCTGAACGTTACCAAGTTATGGTTTCGGGTGGTGATGGTTACGATTCAAGGATTTCAGACTGGATGCGGTTGCTCCTACCTTTGGCTGTTGAGAGAGGAACTTGCATAATCACCAACATGGGTGCAATGGATCCGCCTGGAGCACAGGAAAAGGTTATTGAAATAGCCACCAGCTTGGGGCTTAGTGTTTCTGTTGCTGTGGCTCATGAGATTTCCCTCTCAAATATAGGTTCAGCCTCTCATGAGAAGTCATATTTGATGGAAGGTGGTATTAGCACCTATCTGGGAGCGGCTCCGATTGTTGAATGTTTGGAAAAGTATCAACCAAATGTAATTATAACTTCACGAGTTGCAGATGCTGCCTTATTTTTAGCACCAATGATCTACGAACTTGGTTGGAACTGGGACAACTTGGAACAGCTAGCACAGGGGTCTCTGGCTGGCCATCTTCTAGAGTGTGGTTGTCAACTCACGGGAGGATACTTCATGCACCCAGGAGACAAGTCTAGAGACATGTCTTTAACTCAGCTCCTGGACTTGTCACTTCCTTATGCTGAAATCAGCTCTGATGGAAAAGTATGTGTAGCAAAGGCAGAGGGTAGTGGTGGAGTTTTGAACTTCAGTACATGTGCTCAACAACTTCTTTATGAGATTGGGGATCCGGGTGCTTATGTAACTCCTGATGTGATAATTGATATCCGGGATGTTTCATTCTATCCATTGTCAAGTTGTAAGGTCCTCTGTGCTGGAGCAAAACCATCTGCAGTATCAGTTCCTGACAAACTCCTGCGGTTGGTTCCAAAGGACTACGGTTGGAAAGGATGGGGTGAAATATCATATGGAGGGTATGAATGTGTACAACGTGCCAAGGCTGCTGAGTTTCTGGTGAGATCATGGATGGAAGAAGTAATTCCTGATGTTAGCGGCCATGTAATTTCTTATATAGTTGGGCTTGATAGCCTGAAGGCAACTGGTCTTAGTGACAGTGCTTTGTGCCGGATGGTTAGTGATATTAGATTACGCATGGATGGGTTATTCAAGCTAAAGGAGCACGCAGTCCAATTTACTACAGATTTTACTGCTTTATATACAAATGGACCAGCTGGTGGTGGTGGTATCAGCACTGGACACAAGAAAGAAATCATCCTTGAAAAATATTTGGTCAAGCGTGAACACGTATTCTGGCAGACTGCAGTAAAGCACACCAGAGTGATGAAATCAAACAAAACAGGAATTGGATTTCCAGATGGGATAAAAACTAGTCCTCATGTGTCTGTATTCCCGTTTTCTGAGGCAAGTGAAGTTGATTCTTCTACTGATGTTCCATTTTCTGGAAGAAACTCTCCTGCTCCATCTGGCCAGAAAATTCCACTCTATGATGTAGCAGATAGCCGAGCTGGAGACAAAGGAAATGACTTGAACTTTTCTATCATCCCACATTTTCCTCCAGATGTAGAGAGGTTGAAGAGGATCATAACACCGAAGTGGGTAAAGAAAGTAGTGTCAACTCTTTTAAATTCTTCTTCTTTTCCAGATACAGAAGCCATCAATGAAAGAGACAAATGGGTCGACGAAAATGTAAAGGTGGAAATATATGAAGTGAAGGGAATCCGATCTTTGAATGTAGTGGTTAGGGACATTCTTGATGGTGGTGTTAACTGCTCTAGAAGAATTGACCGGCATGGAAAGACCATCTCCGATCTCATACTGTGTCAGCAAGTTGTATTGCCTCCATGGTTGGGTCGTTCAAGAACTCTAATAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AtuA

Protein Analysis

655

Amino Acids

71.61

Weight (kDa)

6.27

Isoelectric Point (pI)

34.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AtuA PF07287 27 - 321 6.7e-84 Acyclic terpene utilisation family protein AtuA
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 536
AasI GACNNNNNNGTC 1 cut(s) 1763
AccB7I CCANNNNNTGG 3 cut(s) 217, 1304, 1529
AccBSI CCGCTC 1 cut(s) 488
AccI GTMKAC 1 cut(s) 1767
AciI CCGC 6 cut(s) 185, 265, 332, 488, 988, 1122
AclI AACGTT 1 cut(s) 205
AclWI GGATC 5 cut(s) 323, 336, 851, 864, 1676
AcoI YGGCCR 3 cut(s) 640, 1123, 1555
AcsI RAATTY 2 cut(s) 1563, 1714
AcuI CTGAAG 2 cut(s) 802, 1181
AfaI GTAC 2 cut(s) 823, 1056
AfiI CCNNNNNNNGG 7 cut(s) 217, 280, 375, 991, 1304, 1529, 1937
AflII CTTAAG 1 cut(s) 131
AflIII ACRYGT 3 cut(s) 711, 824, 1372
AhlI ACTAGT 1 cut(s) 1457
AjnI CCWGG 3 cut(s) 334, 691, 729
AleI CACNNNNGTG 2 cut(s) 1406, 1681
AluBI AGCT 9 cut(s) 46, 157, 372, 619, 727, 762, 1240, 1301, 1595
AluI AGCT 9 cut(s) 46, 157, 372, 619, 727, 762, 1240, 1301, 1595
Alw21I GWGCWC 4 cut(s) 159, 343, 832, 1251
Alw26I GTCTC 5 cut(s) 636, 690, 702, 1593, 1749
AlwI GGATC 5 cut(s) 323, 336, 851, 864, 1676
AlwNI CAGNNNCTG 3 cut(s) 557, 730, 974
AoxI GGCC 4 cut(s) 116, 640, 1123, 1555
ApeKI GCWGC 4 cut(s) 125, 139, 557, 1070
ApoI RAATTY 2 cut(s) 1563, 1714
Asp700I GAANNNNTTC 1 cut(s) 1107
AspLEI GCGC 1 cut(s) 192
AspS9I GGNCC 2 cut(s) 934, 1295
AsuC2I CCSGG 2 cut(s) 861, 899
AsuHPI GGTGA 5 cut(s) 122, 242, 301, 1037, 1096
AsuNHI GCTAGC 1 cut(s) 619
AvaII GGWCC 2 cut(s) 934, 1295
BalI TGGCCA 2 cut(s) 642, 1557
BamHI GGATCC 2 cut(s) 328, 856
BanII GRGCYC 1 cut(s) 159
BauI CACGAG 1 cut(s) 543
Bbv12I GWGCWC 4 cut(s) 159, 343, 832, 1251
BbvCI CCTCAGC 1 cut(s) 47
BbvI GCAGC 4 cut(s) 112, 126, 544, 1057
BciT130I CCWGG 3 cut(s) 336, 693, 731
BciVI GTATCC 1 cut(s) 671
BclI TGATCA 1 cut(s) 39
BcnI CCSGG 2 cut(s) 861, 899
BcoDI GTCTC 5 cut(s) 636, 690, 702, 1593, 1749
BcuI ACTAGT 1 cut(s) 1457
BfaI CTAG 5 cut(s) 620, 650, 705, 1458, 1863
BfmI CTRYAG 4 cut(s) 140, 960, 1266, 1389
BfrI CTTAAG 1 cut(s) 131
BfuI GTATCC 1 cut(s) 671
BisI GCNGC 6 cut(s) 126, 140, 489, 558, 1071, 1123
BlsI GCNGC 6 cut(s) 127, 141, 490, 559, 1072, 1124
Bme1390I CCNGG 5 cut(s) 336, 693, 731, 861, 899
Bme18I GGWCC 2 cut(s) 934, 1295
BmgT120I GGNCC 2 cut(s) 934, 1295
BmiI GGNNCC 5 cut(s) 97, 330, 492, 858, 996
BmrFI CCNGG 5 cut(s) 336, 693, 731, 861, 899
BmrI ACTGGG 1 cut(s) 610
BmsI GCATC 2 cut(s) 252, 544
BmtI GCTAGC 1 cut(s) 623
BmuI ACTGGG 1 cut(s) 610
BpmI CTGGAG 4 cut(s) 357, 966, 1617, 1629
Bpu10I CCTNAGC 1 cut(s) 47
BpuMI CCSGG 2 cut(s) 861, 899
BsaAI YACGTR 1 cut(s) 1375
BsaI GGTCTC 1 cut(s) 636
BsaJI CCNNGG 3 cut(s) 691, 1065, 1931
Bsc4I CCNNNNNNNGG 7 cut(s) 217, 280, 375, 991, 1304, 1529, 1937
Bse118I RCCGGY 2 cut(s) 98, 1875
Bse1I ACTGG 4 cut(s) 263, 605, 1174, 1327
Bse3DI GCAATG 1 cut(s) 330
BseBI CCWGG 3 cut(s) 336, 693, 731
BseDI CCNNGG 3 cut(s) 691, 1065, 1931
BseGI GGATG 8 cut(s) 267, 907, 1025, 1101, 1203, 1231, 1341, 1629
BseLI CCNNNNNNNGG 7 cut(s) 217, 280, 375, 991, 1304, 1529, 1937
BseMI GCAATG 1 cut(s) 330
BseMII CTCAG 4 cut(s) 38, 737, 1065, 1479
BseNI ACTGG 4 cut(s) 263, 605, 1174, 1327
BseXI GCAGC 4 cut(s) 112, 126, 544, 1057
BshFI GGCC 4 cut(s) 118, 642, 1125, 1557
BsiHKAI GWGCWC 4 cut(s) 159, 343, 832, 1251
BsiSI CCGG 5 cut(s) 99, 860, 898, 1195, 1876
BslFI GGGAC 3 cut(s) 86, 617, 1847
BslI CCNNNNNNNGG 7 cut(s) 217, 280, 375, 991, 1304, 1529, 1937
BsmAI GTCTC 5 cut(s) 636, 690, 702, 1593, 1749
BsmFI GGGAC 3 cut(s) 86, 617, 1847
BsmI GAATGC 1 cut(s) 182
BsnI GGCC 4 cut(s) 118, 642, 1125, 1557
Bso31I GGTCTC 1 cut(s) 636
Bsp1286I GDGCHC 4 cut(s) 159, 343, 832, 1251
Bsp1407I TGTACA 1 cut(s) 1054
Bsp143I GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
Bsp19I CCATGG 1 cut(s) 1931
BspACI CCGC 6 cut(s) 185, 265, 332, 488, 988, 1122
BspANI GGCC 4 cut(s) 118, 642, 1125, 1557
BspCNI CTCAG 4 cut(s) 39, 736, 1066, 1480
BspHI TCATGA 2 cut(s) 403, 439
BspLI GGNNCC 5 cut(s) 97, 330, 492, 858, 996
BspMAI CTGCAG 3 cut(s) 144, 964, 1393
BspOI GCTAGC 1 cut(s) 623
BspPI GGATC 5 cut(s) 323, 336, 851, 864, 1676
BspTI CTTAAG 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 636
BsrBI CCGCTC 1 cut(s) 488
BsrDI GCAATG 1 cut(s) 330
BsrFI RCCGGY 2 cut(s) 98, 1875
BsrGI TGTACA 1 cut(s) 1054
BsrI ACTGG 4 cut(s) 263, 605, 1174, 1327
BssAI RCCGGY 2 cut(s) 98, 1875
BssECI CCNNGG 3 cut(s) 691, 1065, 1931
BssMI GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
BssSI CACGAG 1 cut(s) 543
BssT1I CCWWGG 2 cut(s) 1065, 1931
Bst2BI CACGAG 1 cut(s) 543
Bst2UI CCWGG 3 cut(s) 336, 693, 731
Bst4CI ACNGT 3 cut(s) 1010, 1184, 1908
Bst6I CTCTTC 1 cut(s) 1658
BstAFI CTTAAG 1 cut(s) 131
BstAPI GCANNNNNTGC 1 cut(s) 557
BstAUI TGTACA 1 cut(s) 1054
BstBAI YACGTR 1 cut(s) 1375
BstC8I GCNNGC 3 cut(s) 621, 640, 1251
BstDEI CTNAG 6 cut(s) 47, 380, 723, 1074, 1175, 1488
BstDSI CCRYGG 1 cut(s) 1931
BstF5I GGATG 8 cut(s) 267, 907, 1025, 1101, 1203, 1231, 1341, 1629
BstHHI GCGC 1 cut(s) 192
BstKTI GATC 8 cut(s) 42, 331, 582, 859, 1091, 1671, 1814, 1900
BstMAI GTCTC 5 cut(s) 636, 690, 702, 1593, 1749
BstMBI GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
BstMWI GCNNNNNNNGC 3 cut(s) 557, 1070, 1246
BstNI CCWGG 3 cut(s) 336, 693, 731
BstNSI RCATGY 2 cut(s) 715, 828
BstSCI CCNGG 5 cut(s) 334, 691, 729, 859, 897
BstSFI CTRYAG 4 cut(s) 140, 960, 1266, 1389
BstV1I GCAGC 4 cut(s) 112, 126, 544, 1057
BstX2I RGATCY 2 cut(s) 328, 856
BstXI CCANNNNNNTGG 1 cut(s) 373
BstYI RGATCY 2 cut(s) 328, 856
BsuI GTATCC 1 cut(s) 671
BsuRI GGCC 4 cut(s) 118, 642, 1125, 1557
BtgI CCRYGG 1 cut(s) 1931
BtsCI GGATG 8 cut(s) 267, 907, 1025, 1101, 1203, 1231, 1341, 1629
BtsIMutI CAGTG 2 cut(s) 1189, 1320
Cac8I GCNNGC 3 cut(s) 621, 640, 1251
CaiI CAGNNNCTG 3 cut(s) 557, 730, 974
CciI TCATGA 2 cut(s) 403, 439
CfoI GCGC 1 cut(s) 192
Cfr10I RCCGGY 2 cut(s) 98, 1875
Cfr13I GGNCC 2 cut(s) 934, 1295
Csp6I GTAC 2 cut(s) 822, 1055
CviQI GTAC 2 cut(s) 822, 1055
DdeI CTNAG 6 cut(s) 47, 380, 723, 1074, 1175, 1488
DpnI GATC 8 cut(s) 41, 330, 581, 858, 1090, 1670, 1813, 1899
DpnII GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
DraI TTTAAA 1 cut(s) 1713
DrdI GACNNNNNNGTC 1 cut(s) 1763
DseDI GACNNNNNNGTC 1 cut(s) 1763
EaeI YGGCCR 3 cut(s) 640, 1123, 1555
Eam1104I CTCTTC 1 cut(s) 1658
EarI CTCTTC 1 cut(s) 1658
EciI GGCGGA 1 cut(s) 321
Ecl136II GAGCTC 1 cut(s) 157
Eco130I CCWWGG 2 cut(s) 1065, 1931
Eco147I AGGCCT 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 159
Eco31I GGTCTC 1 cut(s) 636
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 2 cut(s) 934, 1295
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 2 cut(s) 802, 1181
EcoICRI GAGCTC 1 cut(s) 157
EcoO109I RGGNCCY 1 cut(s) 934
EcoRII CCWGG 3 cut(s) 334, 691, 729
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 2 cut(s) 1065, 1931
EcoT38I GRGCYC 1 cut(s) 159
ErhI CCWWGG 2 cut(s) 1065, 1931
FaqI GGGAC 3 cut(s) 86, 617, 1847
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 1 cut(s) 39
FblI GTMKAC 1 cut(s) 1767
Fnu4HI GCNGC 6 cut(s) 126, 140, 489, 558, 1071, 1123
FokI GGATG 8 cut(s) 274, 914, 1032, 1108, 1210, 1238, 1328, 1616
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 6 cut(s) 126, 140, 489, 558, 1071, 1123
FspBI CTAG 5 cut(s) 620, 650, 705, 1458, 1863
GlaI GCGC 1 cut(s) 191
GluI GCNGC 6 cut(s) 126, 140, 489, 558, 1071, 1123
GsuI CTGGAG 4 cut(s) 357, 966, 1617, 1629
HaeIII GGCC 4 cut(s) 118, 642, 1125, 1557
HapII CCGG 5 cut(s) 99, 860, 898, 1195, 1876
HhaI GCGC 1 cut(s) 192
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HincII GTYRAC 4 cut(s) 665, 1704, 1768, 1855
HindII GTYRAC 4 cut(s) 665, 1704, 1768, 1855
HinfI GANTC 4 cut(s) 147, 242, 1505, 1806
HpaI GTTAAC 1 cut(s) 1855
HpaII CCGG 5 cut(s) 99, 860, 898, 1195, 1876
HphI GGTGA 5 cut(s) 122, 242, 301, 1037, 1096
Hpy166II GTNNAC 6 cut(s) 665, 1055, 1370, 1704, 1768, 1855
Hpy188I TCNGA 6 cut(s) 256, 495, 766, 1489, 1811, 1897
Hpy8I GTNNAC 6 cut(s) 665, 1055, 1370, 1704, 1768, 1855
Hpy99I CGWCG 1 cut(s) 1772
HpyAV CCTTC 5 cut(s) 8, 63, 455, 1156, 1795
HpyCH4III ACNGT 3 cut(s) 1010, 1184, 1908
HpyCH4IV ACGT 3 cut(s) 205, 1060, 1374
HpyCH4V TGCA 7 cut(s) 142, 303, 323, 551, 688, 962, 1391
HpyF10VI GCNNNNNNNGC 3 cut(s) 557, 1070, 1246
HpyF3I CTNAG 6 cut(s) 47, 380, 723, 1074, 1175, 1488
HpySE526I ACGT 3 cut(s) 205, 1060, 1374
HspAI GCGC 1 cut(s) 190
Ksp22I TGATCA 1 cut(s) 39
KspAI GTTAAC 1 cut(s) 1855
Kzo9I GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
Lsp1109I GCAGC 4 cut(s) 112, 126, 544, 1057
LweI GCATC 2 cut(s) 252, 544
MaeI CTAG 5 cut(s) 620, 650, 705, 1458, 1863
MaeII ACGT 3 cut(s) 205, 1060, 1374
MaeIII GTNAC 6 cut(s) 110, 206, 236, 738, 871, 1178
MalI GATC 8 cut(s) 41, 330, 581, 858, 1090, 1670, 1813, 1899
MbiI CCGCTC 1 cut(s) 488
MboI GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
MboII GAAGA 8 cut(s) 638, 1112, 1500, 1545, 1675, 1710, 1713, 1878
MfeI CAATTG 1 cut(s) 31
MflI RGATCY 2 cut(s) 328, 856
MhlI GDGCHC 4 cut(s) 159, 343, 832, 1251
MlsI TGGCCA 2 cut(s) 642, 1557
MluNI TGGCCA 2 cut(s) 642, 1557
MlyI GAGTC 1 cut(s) 156
MmeI TCCRAC 2 cut(s) 575, 992
Mox20I TGGCCA 2 cut(s) 642, 1557
MroXI GAANNNNTTC 1 cut(s) 1107
MscI TGGCCA 2 cut(s) 642, 1557
MseI TTAA 4 cut(s) 132, 719, 1712, 1854
MslI CAYNNNNRTG 3 cut(s) 314, 1406, 1681
Msp20I TGGCCA 2 cut(s) 642, 1557
MspA1I CMGCKG 1 cut(s) 1301
MspCI CTTAAG 1 cut(s) 131
MspI CCGG 5 cut(s) 99, 860, 898, 1195, 1876
MspR9I CCNGG 5 cut(s) 336, 693, 731, 861, 899
MunI CAATTG 1 cut(s) 31
Mva1269I GAATGC 1 cut(s) 182
MvaI CCWGG 3 cut(s) 336, 693, 731
MwoI GCNNNNNNNGC 3 cut(s) 557, 1070, 1246
NciI CCSGG 2 cut(s) 861, 899
NcoI CCATGG 1 cut(s) 1931
NdeI CATATG 1 cut(s) 1036
NdeII GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
NheI GCTAGC 1 cut(s) 619
NlaIV GGNNCC 5 cut(s) 97, 330, 492, 858, 996
NmeAIII GCCGAG 1 cut(s) 1616
NmuCI GTSAC 3 cut(s) 110, 738, 1178
NspI RCATGY 2 cut(s) 715, 828
OliI CACNNNNGTG 2 cut(s) 1406, 1681
PagI TCATGA 2 cut(s) 403, 439
PceI AGGCCT 1 cut(s) 118
PciI ACATGT 2 cut(s) 711, 824
PctI GAATGC 1 cut(s) 182
PdmI GAANNNNTTC 1 cut(s) 1107
PfeI GAWTC 3 cut(s) 242, 1505, 1806
PflMI CCANNNNNTGG 3 cut(s) 217, 1304, 1529
PfoI TCCNGGA 2 cut(s) 729, 897
PkrI GCNGC 6 cut(s) 127, 141, 490, 559, 1072, 1124
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
Ppu21I YACGTR 1 cut(s) 1375
PpuMI RGGWCCY 1 cut(s) 934
PscI ACATGT 2 cut(s) 711, 824
PsiI TTATAA 1 cut(s) 536
Psp124BI GAGCTC 1 cut(s) 159
Psp1406I AACGTT 1 cut(s) 205
Psp5II RGGWCCY 1 cut(s) 934
Psp6I CCWGG 3 cut(s) 334, 691, 729
PspGI CCWGG 3 cut(s) 334, 691, 729
PspN4I GGNNCC 5 cut(s) 97, 330, 492, 858, 996
PspPI GGNCC 2 cut(s) 934, 1295
PspPPI RGGWCCY 1 cut(s) 934
PstI CTGCAG 3 cut(s) 144, 964, 1393
PstNI CAGNNNCTG 3 cut(s) 557, 730, 974
PsuI RGATCY 2 cut(s) 328, 856
PvuII CAGCTG 1 cut(s) 1301
RsaI GTAC 2 cut(s) 823, 1056
RsaNI GTAC 2 cut(s) 822, 1055
RseI CAYNNNNRTG 3 cut(s) 314, 1406, 1681
SacI GAGCTC 1 cut(s) 159
SalI GTCGAC 1 cut(s) 1766
SaqAI TTAA 4 cut(s) 132, 719, 1712, 1854
SatI GCNGC 6 cut(s) 126, 140, 489, 558, 1071, 1123
Sau3AI GATC 8 cut(s) 39, 328, 579, 856, 1088, 1668, 1811, 1897
Sau96I GGNCC 2 cut(s) 934, 1295
SchI GAGTC 1 cut(s) 156
ScrFI CCNGG 5 cut(s) 336, 693, 731, 861, 899
SduI GDGCHC 4 cut(s) 159, 343, 832, 1251
SfaNI GCATC 2 cut(s) 252, 544
SfcI CTRYAG 4 cut(s) 140, 960, 1266, 1389
SinI GGWCC 2 cut(s) 934, 1295
SmiMI CAYNNNNRTG 3 cut(s) 314, 1406, 1681
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
SpeI ACTAGT 1 cut(s) 1457
SseBI AGGCCT 1 cut(s) 118
SsiI CCGC 6 cut(s) 185, 265, 332, 488, 988, 1122
SspI AATATT 1 cut(s) 1355
SspMI CTAG 5 cut(s) 620, 650, 705, 1458, 1863
SstI GAGCTC 1 cut(s) 159
StuI AGGCCT 1 cut(s) 118
StyD4I CCNGG 5 cut(s) 334, 691, 729, 859, 897
StyI CCWWGG 2 cut(s) 1065, 1931
TaaI ACNGT 3 cut(s) 1010, 1184, 1908
TaiI ACGT 3 cut(s) 208, 1063, 1377
TaqI TCGA 1 cut(s) 1767
TatI WGTACW 2 cut(s) 821, 1054
TauI GCSGC 2 cut(s) 491, 1125
TfiI GAWTC 3 cut(s) 242, 1505, 1806
Tru1I TTAA 4 cut(s) 132, 719, 1712, 1854
Tru9I TTAA 4 cut(s) 132, 719, 1712, 1854
TscAI CASTG 2 cut(s) 1189, 1327
TseFI GTSAC 3 cut(s) 110, 738, 1178
TseI GCWGC 4 cut(s) 125, 139, 557, 1070
Tsp45I GTSAC 3 cut(s) 110, 738, 1178
TspDTI ATGAA 7 cut(s) 27, 673, 897, 1062, 1427, 1764, 1809
TspRI CASTG 2 cut(s) 1189, 1327
Van91I CCANNNNNTGG 3 cut(s) 217, 1304, 1529
Vha464I CTTAAG 1 cut(s) 131
VpaK11BI GGWCC 2 cut(s) 934, 1295
XapI RAATTY 2 cut(s) 1563, 1714
XbaI TCTAGA 3 cut(s) 649, 704, 1862
XceI RCATGY 2 cut(s) 715, 828
XmiI GTMKAC 1 cut(s) 1767
XmnI GAANNNNTTC 1 cut(s) 1107
XspI CTAG 5 cut(s) 620, 650, 705, 1458, 1863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.