Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0002235

Physical Location & Seq

Genomic Coordinates Forward (+)

46414357 .. 46421253

Gene Structure 6897 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG250300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGGTGAGCTTCCTTTTTCCCAGTTGACTCTGTTCTCGGTAAATTCTGGGACGTTGTTTGTAGAAATGGAAATCCATGAAGGAGGTGTAATTCGCAATTGTGTGATCAAGCTGAGGGAGGATTGTAAAAAGAGAAGAGACAAGGTCTATGTTGGCTGTGGTGCTGGTTTTGGAGGTGACAGGCCTTTGGCAGCTCTTAAGTTGCTGCAGAGAGTCAAAGAGCTCAACTATATCGTGCTTGAATGCCTCGCAGAGCGCACCCTTGCTGAACGGTATCAAGTTATGGTTTCGGGTGGTGATGGTTATGATTCAAGGATTTCTGACTGGATGCGATTGCTCCTTCCTTCGGCTGTTGAGAGAGGAACTTGCATAATCACCAACATGGGTGCAATGGATCCACCGGGGGCACAGGAAAAGGTTATAGAAATAGCCAGCAGCTTGGGGCTTAGTGTTTCTGTTGCTGTGGCTCATGAGATTTCTCTCACAAATATAGGTTCAGCCTCTCATGAGAAGTCATTTTTGATGGAAGGTGGTATTAGCACCTATCTGGGAGCGGCTCCGATTGTTGAATGTTTGGAAAAGTATCTGCCAAATGTAATTATAACTTCACGGGTTGCAGATGCTGCCTTATTTTTAGCACCAATGATTTATGAACTTGGTTGGAACTGGGACAACTTGGAGCAGCTAGCACAGGGGTCTCTGGCAGGCCATCTTCTAGAGTGTGGTTGTCAACTCACGGGGGGATACTTCATGCACCCAAGGGACAAGTCTCGAGACATGTCTTCCTCTCAGCTCCTAGACTTGTCACTTCCTTATGCTGAAATTAGCTCTGATGGAAAAGTATGTGTAGCGAAGGCAGAGGGTAGTGGTGGGGTTTTGAACTTCAGTACATGTGCTCAACAACTTCTTTATGAGATCGGGAATCCGGGTGCTTATGTAACTCCTGATGTGATAATTGATATCCGGGATGTTTCATTCTACCCATTATCAAGTTGTAAGGTCCTCTGTACTGGAGCAAAACCATCTGCAGTATCAGTTCCTGATAAACTCCTGCGGTTGGTTCCAAAGGACTATGGTTGGAAAGGATGGGGTGAAATATCTTATGGAGGATTTGAATGTGTTAAACGTGCCAAGATTGCTGAATTTCTGGTGAGATCATGGATGGAAGAAGTAATTCCTGATGTTAGCAGCCATGTGGTTTCTTATATAGTTGGGCTTGATAGCCTGAAGGCAACTGGTCTTAGTGACAGTGCTTCATGTCAGATGGTTAGCGATATTAGGTTACGCATGGATGGGTTATTCAAGCTAAAGGAGCATGCAGTCCAATTTGTTACAGATTTTACTGCTTTATATACAAATGGACCAGCTGGTGGTGGTGGTATTAGCACTGGACACAAGAAAGAGATCATCCTTGAAAAATATTTGGTCAAGCGTGAACACGTATTCTGGCAGACTGCAGTAAAACACACCAGAGTGATGAAATCAAATAAAACAGGAATTAAATTTCAAGATGGGACAAATATTAGTCTTCCTTATGTGTCTGCATTGCCGATTTCAGAAGCAAGTGAAGTCGATTCTTCTATTGGTGTTCCATTTTCTGGCAGAATCTCTCCTGCTCCATCTGGCCAGAAAATTCCACTCTATGATGTAGCACATAGCCGAGCTGGAGACAAAGGAAATGACTTGAATTTTTCTATCATCCCACATTTTCCTCCAGATGTAGAGAGGTTGAAGAGGATCATAACACCGCAGTGGGTAAAGAAAGTAGTGTCAACTCTTTTAAATTCCTCTTCTTTTCCAGATACGGATGCCATCAATGAAAGAGACAAATGGGTCGACGAAAATGTAAAGGTGGAAATTTATGAAGTGAAGGGAATCCGATCTTTGAATGTAGTGGTTAGGGACATTCTTGATGGTGGTGTAAACTGCTCTAGAAGAATTGACCGGCATGGAAAGACCATCTCCGATCTCATACTGTGTCAGCAAGTTGTATTGCCTCCATGGTTGGGTCGTTCAAGAACTCTTATTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AtuA

Protein Analysis

677

Amino Acids

74.1

Weight (kDa)

6.39

Isoelectric Point (pI)

36.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AtuA	PF07287	49 - 482	2.6e-98	Acyclic terpene utilisation family protein AtuA
AtuA_ferredoxin	PF23544	545 - 663	5.5e-46	AtuA ferredoxin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01770
fragaria_vesca	FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830
malus_domestica	MD01G1054400.v1.1 MD10G1234500.v1.1
prunus_persica	Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1
pyrus_communis	pycom01g07960 pycom06g04950 pycom07g13860 pycom07g13870
rosa_chinensis	RchiOBHm_Chr1g0354021 RchiOBHm_Chr1g0354041
rosa_laevigata	RLG00000028232 RLG00000028235
rosa_multiflora	Rmu_sc0004632.1_g000002 Rmu_sc0004632.1_g000004 Rmu_sc0025756.1_g000001 Rmu_sc0031149.1_g000001 Rmu_sc0031810.1_g000001
rosa_roxburghii	Rroxscaffold_4G00301280 Rroxscaffold_4G00301310 Rroxscaffold_4G00301330
rosa_rugosa	Rorug01G0240300 Rorug01G0240500
rosa_samantha	Rh1AG251600 Rh1BG223200 Rh1BG223400 Rh1CG236000 Rh1DG250100 Rh1DG250300
rosa_wichuraiana	Rw1G021940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	602
AasI	GACNNNNNNGTC	1 cut(s)	1832
AccB7I	CCANNNNNTGG	2 cut(s)	1370, 1598
AccBSI	CCGCTC	1 cut(s)	554
AccI	GTMKAC	1 cut(s)	1836
AciI	CCGC	3 cut(s)	554, 1054, 1748
AclWI	GGATC	3 cut(s)	389, 402, 1745
AcoI	YGGCCR	1 cut(s)	1624
AcsI	RAATTY	7 cut(s)	43, 1142, 1502, 1632, 1687, 1783, 1857
AcuI	CTGAAG	2 cut(s)	868, 1247
AfaI	GTAC	2 cut(s)	889, 1009
AfiI	CCNNNNNNNGG	5 cut(s)	346, 1057, 1370, 1598, 2006
AflII	CTTAAG	1 cut(s)	197
AflIII	ACRYGT	3 cut(s)	777, 890, 1438
AleI	CACNNNNGTG	2 cut(s)	1472, 1750
Alw21I	GWGCWC	2 cut(s)	225, 898
Alw26I	GTCTC	6 cut(s)	132, 702, 768, 774, 1662, 1818
AlwI	GGATC	3 cut(s)	389, 402, 1745
AlwNI	CAGNNNCTG	2 cut(s)	623, 1040
Ama87I	CYCGRG	1 cut(s)	771
AoxI	GGCC	3 cut(s)	182, 706, 1624
ApeKI	GCWGC	6 cut(s)	191, 205, 435, 623, 682, 1188
ApoI	RAATTY	7 cut(s)	43, 1142, 1502, 1632, 1687, 1783, 1857
Asp700I	GAANNNNTTC	1 cut(s)	1173
AspLEI	GCGC	1 cut(s)	258
AspS9I	GGNCC	2 cut(s)	1000, 1361
AsuC2I	CCSGG	3 cut(s)	402, 927, 965
AsuHPI	GGTGA	6 cut(s)	17, 188, 308, 367, 1103, 1162
AsuNHI	GCTAGC	1 cut(s)	685
AvaI	CYCGRG	1 cut(s)	771
AvaII	GGWCC	2 cut(s)	1000, 1361
BaeGI	GKGCMC	1 cut(s)	409
BalI	TGGCCA	1 cut(s)	1626
BamHI	GGATCC	1 cut(s)	394
BanII	GRGCYC	1 cut(s)	225
BbsI	GAAGAC	2 cut(s)	774, 1520
Bbv12I	GWGCWC	2 cut(s)	225, 898
BbvCI	CCTCAGC	1 cut(s)	113
BbvI	GCAGC	6 cut(s)	192, 203, 447, 610, 694, 1200
BciVI	GTATCC	1 cut(s)	737
BclI	TGATCA	1 cut(s)	105
BcnI	CCSGG	3 cut(s)	402, 927, 965
BcoDI	GTCTC	6 cut(s)	132, 702, 768, 774, 1662, 1818
BfaI	CTAG	4 cut(s)	686, 716, 797, 1932
BfmI	CTRYAG	3 cut(s)	206, 1026, 1455
BfrI	CTTAAG	1 cut(s)	197
BfuI	GTATCC	1 cut(s)	737
BisI	GCNGC	7 cut(s)	192, 206, 436, 555, 624, 683, 1189
BlsI	GCNGC	7 cut(s)	193, 207, 437, 556, 625, 684, 1190
Bme1390I	CCNGG	3 cut(s)	402, 927, 965
Bme18I	GGWCC	2 cut(s)	1000, 1361
BmeT110I	CYCGRG	1 cut(s)	771
BmgT120I	GGNCC	2 cut(s)	1000, 1361
BmiI	GGNNCC	3 cut(s)	396, 558, 1062
BmrFI	CCNGG	3 cut(s)	402, 927, 965
BmrI	ACTGGG	2 cut(s)	16, 676
BmsI	GCATC	3 cut(s)	318, 610, 1798
BmtI	GCTAGC	1 cut(s)	689
BmuI	ACTGGG	2 cut(s)	16, 676
BpiI	GAAGAC	2 cut(s)	774, 1520
BpmI	CTGGAG	3 cut(s)	1032, 1686, 1698
Bpu10I	CCTNAGC	1 cut(s)	113
BpuMI	CCSGG	3 cut(s)	402, 927, 965
BsaAI	YACGTR	1 cut(s)	1441
BsaI	GGTCTC	1 cut(s)	702
BsaJI	CCNNGG	3 cut(s)	401, 758, 2000
Bsc4I	CCNNNNNNNGG	5 cut(s)	346, 1057, 1370, 1598, 2006
Bse118I	RCCGGY	1 cut(s)	1944
Bse1I	ACTGG	6 cut(s)	22, 329, 671, 1015, 1240, 1393
Bse3DI	GCAATG	2 cut(s)	396, 1544
BseDI	CCNNGG	3 cut(s)	401, 758, 2000
BseGI	GGATG	8 cut(s)	333, 973, 1091, 1167, 1297, 1407, 1698, 1813
BseLI	CCNNNNNNNGG	5 cut(s)	346, 1057, 1370, 1598, 2006
BseMI	GCAATG	2 cut(s)	396, 1544
BseMII	CTCAG	2 cut(s)	104, 803
BseNI	ACTGG	6 cut(s)	22, 329, 671, 1015, 1240, 1393
BseSI	GKGCMC	1 cut(s)	409
BseXI	GCAGC	6 cut(s)	192, 203, 447, 610, 694, 1200
BshFI	GGCC	3 cut(s)	184, 708, 1626
BsiHKAI	GWGCWC	2 cut(s)	225, 898
BsiHKCI	CYCGRG	1 cut(s)	771
BsiSI	CCGG	4 cut(s)	401, 926, 964, 1945
BslFI	GGGAC	5 cut(s)	64, 683, 776, 1528, 1916
BslI	CCNNNNNNNGG	5 cut(s)	346, 1057, 1370, 1598, 2006
BsmAI	GTCTC	6 cut(s)	132, 702, 768, 774, 1662, 1818
BsmFI	GGGAC	5 cut(s)	64, 683, 776, 1528, 1916
BsmI	GAATGC	1 cut(s)	248
BsnI	GGCC	3 cut(s)	184, 708, 1626
Bso31I	GGTCTC	1 cut(s)	702
BsoBI	CYCGRG	1 cut(s)	771
Bsp1286I	GDGCHC	3 cut(s)	225, 409, 898
Bsp143I	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
Bsp19I	CCATGG	1 cut(s)	2000
BspACI	CCGC	3 cut(s)	554, 1054, 1748
BspANI	GGCC	3 cut(s)	184, 708, 1626
BspCNI	CTCAG	2 cut(s)	105, 802
BspHI	TCATGA	2 cut(s)	469, 505
BspLI	GGNNCC	3 cut(s)	396, 558, 1062
BspMAI	CTGCAG	3 cut(s)	210, 1030, 1459
BspOI	GCTAGC	1 cut(s)	689
BspPI	GGATC	3 cut(s)	389, 402, 1745
BspTI	CTTAAG	1 cut(s)	197
BspTNI	GGTCTC	1 cut(s)	702
BsrBI	CCGCTC	1 cut(s)	554
BsrDI	GCAATG	2 cut(s)	396, 1544
BsrFI	RCCGGY	1 cut(s)	1944
BsrI	ACTGG	6 cut(s)	22, 329, 671, 1015, 1240, 1393
BssAI	RCCGGY	1 cut(s)	1944
BssECI	CCNNGG	3 cut(s)	401, 758, 2000
BssMI	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
BssT1I	CCWWGG	2 cut(s)	758, 2000
Bst4CI	ACNGT	3 cut(s)	273, 1250, 1977
Bst6I	CTCTTC	3 cut(s)	130, 1727, 1795
BstAFI	CTTAAG	1 cut(s)	197
BstAPI	GCANNNNNTGC	1 cut(s)	623
BstBAI	YACGTR	1 cut(s)	1441
BstC8I	GCNNGC	4 cut(s)	433, 687, 706, 1317
BstDEI	CTNAG	4 cut(s)	113, 446, 789, 1241
BstDSI	CCRYGG	1 cut(s)	2000
BstF5I	GGATG	8 cut(s)	333, 973, 1091, 1167, 1297, 1407, 1698, 1813
BstHHI	GCGC	1 cut(s)	258
BstKTI	GATC	8 cut(s)	108, 397, 918, 1157, 1407, 1740, 1883, 1969
BstMAI	GTCTC	6 cut(s)	132, 702, 768, 774, 1662, 1818
BstMBI	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
BstMWI	GCNNNNNNNGC	3 cut(s)	623, 1136, 1312
BstNSI	RCATGY	3 cut(s)	781, 894, 1319
BstSCI	CCNGG	3 cut(s)	400, 925, 963
BstSFI	CTRYAG	3 cut(s)	206, 1026, 1455
BstSLI	GKGCMC	1 cut(s)	409
BstV1I	GCAGC	6 cut(s)	192, 203, 447, 610, 694, 1200
BstV2I	GAAGAC	2 cut(s)	774, 1520
BstX2I	RGATCY	1 cut(s)	394
BstXI	CCANNNNNNTGG	1 cut(s)	439
BstYI	RGATCY	1 cut(s)	394
BsuI	GTATCC	1 cut(s)	737
BsuRI	GGCC	3 cut(s)	184, 708, 1626
BtgI	CCRYGG	1 cut(s)	2000
BtsCI	GGATG	8 cut(s)	333, 973, 1091, 1167, 1297, 1407, 1698, 1813
BtsI	GCAGTG	1 cut(s)	1757
BtsIMutI	CAGTG	3 cut(s)	1255, 1386, 1757
Cac8I	GCNNGC	4 cut(s)	433, 687, 706, 1317
CaiI	CAGNNNCTG	2 cut(s)	623, 1040
CciI	TCATGA	2 cut(s)	469, 505
CfoI	GCGC	1 cut(s)	258
Cfr10I	RCCGGY	1 cut(s)	1944
Cfr13I	GGNCC	2 cut(s)	1000, 1361
Csp6I	GTAC	2 cut(s)	888, 1008
CviQI	GTAC	2 cut(s)	888, 1008
DdeI	CTNAG	4 cut(s)	113, 446, 789, 1241
DpnI	GATC	8 cut(s)	107, 396, 917, 1156, 1406, 1739, 1882, 1968
DpnII	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
DraI	TTTAAA	1 cut(s)	1782
DrdI	GACNNNNNNGTC	1 cut(s)	1832
DseDI	GACNNNNNNGTC	1 cut(s)	1832
EaeI	YGGCCR	1 cut(s)	1624
Eam1104I	CTCTTC	3 cut(s)	130, 1727, 1795
EarI	CTCTTC	3 cut(s)	130, 1727, 1795
Ecl136II	GAGCTC	1 cut(s)	223
Eco130I	CCWWGG	2 cut(s)	758, 2000
Eco147I	AGGCCT	1 cut(s)	184
Eco24I	GRGCYC	1 cut(s)	225
Eco31I	GGTCTC	1 cut(s)	702
Eco32I	GATATC	1 cut(s)	961
Eco47I	GGWCC	2 cut(s)	1000, 1361
Eco53kI	GAGCTC	1 cut(s)	223
Eco57I	CTGAAG	2 cut(s)	868, 1247
Eco88I	CYCGRG	1 cut(s)	771
EcoICRI	GAGCTC	1 cut(s)	223
EcoO109I	RGGNCCY	1 cut(s)	1000
EcoRV	GATATC	1 cut(s)	961
EcoT14I	CCWWGG	2 cut(s)	758, 2000
EcoT38I	GRGCYC	1 cut(s)	225
ErhI	CCWWGG	2 cut(s)	758, 2000
FaqI	GGGAC	5 cut(s)	64, 683, 776, 1528, 1916
FbaI	TGATCA	1 cut(s)	105
FblI	GTMKAC	1 cut(s)	1836
Fnu4HI	GCNGC	7 cut(s)	192, 206, 436, 555, 624, 683, 1189
FokI	GGATG	8 cut(s)	340, 980, 1098, 1174, 1304, 1394, 1685, 1820
FriOI	GRGCYC	1 cut(s)	225
Fsp4HI	GCNGC	7 cut(s)	192, 206, 436, 555, 624, 683, 1189
FspBI	CTAG	4 cut(s)	686, 716, 797, 1932
GlaI	GCGC	1 cut(s)	257
GluI	GCNGC	7 cut(s)	192, 206, 436, 555, 624, 683, 1189
GsuI	CTGGAG	3 cut(s)	1032, 1686, 1698
HaeIII	GGCC	3 cut(s)	184, 708, 1626
HapII	CCGG	4 cut(s)	401, 926, 964, 1945
HhaI	GCGC	1 cut(s)	258
Hin6I	GCGC	1 cut(s)	256
HinP1I	GCGC	1 cut(s)	256
HincII	GTYRAC	4 cut(s)	27, 731, 1773, 1837
HindII	GTYRAC	4 cut(s)	27, 731, 1773, 1837
HinfI	GANTC	7 cut(s)	28, 213, 308, 922, 1574, 1605, 1875
HpaII	CCGG	4 cut(s)	401, 926, 964, 1945
HphI	GGTGA	6 cut(s)	17, 188, 308, 367, 1103, 1162
Hpy166II	GTNNAC	6 cut(s)	27, 731, 1436, 1773, 1837, 1924
Hpy188I	TCNGA	7 cut(s)	322, 561, 832, 1263, 1558, 1880, 1966
Hpy8I	GTNNAC	6 cut(s)	27, 731, 1436, 1773, 1837, 1924
Hpy99I	CGWCG	1 cut(s)	1841
HpyAV	CCTTC	7 cut(s)	74, 350, 354, 521, 847, 1222, 1864
HpyCH4III	ACNGT	3 cut(s)	273, 1250, 1977
HpyCH4IV	ACGT	3 cut(s)	53, 1126, 1440
HpyCH4V	TGCA	9 cut(s)	208, 369, 389, 617, 754, 1028, 1319, 1457, 1544
HpyF10VI	GCNNNNNNNGC	3 cut(s)	623, 1136, 1312
HpyF3I	CTNAG	4 cut(s)	113, 446, 789, 1241
HpySE526I	ACGT	3 cut(s)	53, 1126, 1440
HspAI	GCGC	1 cut(s)	256
Ksp22I	TGATCA	1 cut(s)	105
Kzo9I	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
LmnI	GCTCC	8 cut(s)	342, 551, 562, 679, 798, 1013, 1312, 1621
Lsp1109I	GCAGC	6 cut(s)	192, 203, 447, 610, 694, 1200
LweI	GCATC	3 cut(s)	318, 610, 1798
MaeI	CTAG	4 cut(s)	686, 716, 797, 1932
MaeII	ACGT	3 cut(s)	53, 1126, 1440
MaeIII	GTNAC	6 cut(s)	176, 804, 937, 1244, 1281, 1330
MalI	GATC	8 cut(s)	107, 396, 917, 1156, 1406, 1739, 1882, 1968
MbiI	CCGCTC	1 cut(s)	554
MboI	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
MboII	GAAGA	9 cut(s)	147, 704, 774, 1178, 1520, 1569, 1744, 1782, 1947
MfeI	CAATTG	1 cut(s)	97
MflI	RGATCY	1 cut(s)	394
MhlI	GDGCHC	3 cut(s)	225, 409, 898
MlsI	TGGCCA	1 cut(s)	1626
MluNI	TGGCCA	1 cut(s)	1626
MlyI	GAGTC	2 cut(s)	22, 222
MmeI	TCCRAC	2 cut(s)	641, 1058
Mox20I	TGGCCA	1 cut(s)	1626
MroXI	GAANNNNTTC	1 cut(s)	1173
MscI	TGGCCA	1 cut(s)	1626
MseI	TTAA	4 cut(s)	198, 1122, 1500, 1781
MslI	CAYNNNNRTG	3 cut(s)	380, 1472, 1750
Msp20I	TGGCCA	1 cut(s)	1626
MspA1I	CMGCKG	1 cut(s)	1367
MspCI	CTTAAG	1 cut(s)	197
MspI	CCGG	4 cut(s)	401, 926, 964, 1945
MspR9I	CCNGG	3 cut(s)	402, 927, 965
MunI	CAATTG	1 cut(s)	97
Mva1269I	GAATGC	1 cut(s)	248
MwoI	GCNNNNNNNGC	3 cut(s)	623, 1136, 1312
NciI	CCSGG	3 cut(s)	402, 927, 965
NcoI	CCATGG	1 cut(s)	2000
NdeII	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
NheI	GCTAGC	1 cut(s)	685
NlaIV	GGNNCC	3 cut(s)	396, 558, 1062
NmeAIII	GCCGAG	1 cut(s)	1685
NmuCI	GTSAC	3 cut(s)	176, 804, 1244
NspI	RCATGY	3 cut(s)	781, 894, 1319
OliI	CACNNNNGTG	2 cut(s)	1472, 1750
PaeI	GCATGC	1 cut(s)	1319
PaeR7I	CTCGAG	1 cut(s)	771
PagI	TCATGA	2 cut(s)	469, 505
PceI	AGGCCT	1 cut(s)	184
PciI	ACATGT	2 cut(s)	777, 890
PctI	GAATGC	1 cut(s)	248
PdmI	GAANNNNTTC	1 cut(s)	1173
PfeI	GAWTC	5 cut(s)	308, 922, 1574, 1605, 1875
PflFI	GACNNNGTC	1 cut(s)	143
PflMI	CCANNNNNTGG	2 cut(s)	1370, 1598
PfoI	TCCNGGA	1 cut(s)	963
PkrI	GCNGC	7 cut(s)	193, 207, 437, 556, 625, 684, 1190
PleI	GAGTC	2 cut(s)	22, 221
PpsI	GAGTC	2 cut(s)	22, 221
Ppu21I	YACGTR	1 cut(s)	1441
PpuMI	RGGWCCY	1 cut(s)	1000
PscI	ACATGT	2 cut(s)	777, 890
PsiI	TTATAA	1 cut(s)	602
Psp124BI	GAGCTC	1 cut(s)	225
Psp5II	RGGWCCY	1 cut(s)	1000
PspN4I	GGNNCC	3 cut(s)	396, 558, 1062
PspPI	GGNCC	2 cut(s)	1000, 1361
PspPPI	RGGWCCY	1 cut(s)	1000
PstI	CTGCAG	3 cut(s)	210, 1030, 1459
PstNI	CAGNNNCTG	2 cut(s)	623, 1040
PsuI	RGATCY	1 cut(s)	394
PsyI	GACNNNGTC	1 cut(s)	143
PvuII	CAGCTG	1 cut(s)	1367
RsaI	GTAC	2 cut(s)	889, 1009
RsaNI	GTAC	2 cut(s)	888, 1008
RseI	CAYNNNNRTG	3 cut(s)	380, 1472, 1750
SacI	GAGCTC	1 cut(s)	225
SalI	GTCGAC	1 cut(s)	1835
SaqAI	TTAA	4 cut(s)	198, 1122, 1500, 1781
SatI	GCNGC	7 cut(s)	192, 206, 436, 555, 624, 683, 1189
Sau3AI	GATC	8 cut(s)	105, 394, 915, 1154, 1404, 1737, 1880, 1966
Sau96I	GGNCC	2 cut(s)	1000, 1361
SchI	GAGTC	2 cut(s)	22, 222
ScrFI	CCNGG	3 cut(s)	402, 927, 965
SduI	GDGCHC	3 cut(s)	225, 409, 898
SfaNI	GCATC	3 cut(s)	318, 610, 1798
SfcI	CTRYAG	3 cut(s)	206, 1026, 1455
Sfr274I	CTCGAG	1 cut(s)	771
SinI	GGWCC	2 cut(s)	1000, 1361
SlaI	CTCGAG	1 cut(s)	771
SmiMI	CAYNNNNRTG	3 cut(s)	380, 1472, 1750
SmlI	CTYRAG	2 cut(s)	197, 771
SmoI	CTYRAG	2 cut(s)	197, 771
SphI	GCATGC	1 cut(s)	1319
SseBI	AGGCCT	1 cut(s)	184
SsiI	CCGC	3 cut(s)	554, 1054, 1748
SspI	AATATT	2 cut(s)	1421, 1522
SspMI	CTAG	4 cut(s)	686, 716, 797, 1932
SstI	GAGCTC	1 cut(s)	225
StuI	AGGCCT	1 cut(s)	184
StyD4I	CCNGG	3 cut(s)	400, 925, 963
StyI	CCWWGG	2 cut(s)	758, 2000
TaaI	ACNGT	3 cut(s)	273, 1250, 1977
TaiI	ACGT	3 cut(s)	56, 1129, 1443
TaqI	TCGA	3 cut(s)	772, 1572, 1836
TatI	WGTACW	2 cut(s)	887, 1007
TauI	GCSGC	1 cut(s)	557
TfiI	GAWTC	5 cut(s)	308, 922, 1574, 1605, 1875
Tru1I	TTAA	4 cut(s)	198, 1122, 1500, 1781
Tru9I	TTAA	4 cut(s)	198, 1122, 1500, 1781
TscAI	CASTG	3 cut(s)	1255, 1393, 1757
TseFI	GTSAC	3 cut(s)	176, 804, 1244
TseI	GCWGC	6 cut(s)	191, 205, 435, 623, 682, 1188
Tsp45I	GTSAC	3 cut(s)	176, 804, 1244
TspDTI	ATGAA	8 cut(s)	93, 666, 739, 963, 1245, 1493, 1833, 1878
TspGWI	ACGGA	1 cut(s)	1820
TspRI	CASTG	3 cut(s)	1255, 1393, 1757
Tth111I	GACNNNGTC	1 cut(s)	143
Van91I	CCANNNNNTGG	2 cut(s)	1370, 1598
Vha464I	CTTAAG	1 cut(s)	197
VpaK11BI	GGWCC	2 cut(s)	1000, 1361
XapI	RAATTY	7 cut(s)	43, 1142, 1502, 1632, 1687, 1783, 1857
XbaI	TCTAGA	2 cut(s)	715, 1931
XceI	RCATGY	3 cut(s)	781, 894, 1319
XhoI	CTCGAG	1 cut(s)	771
XmiI	GTMKAC	1 cut(s)	1836
XmnI	GAANNNNTTC	1 cut(s)	1173
XspI	CTAG	4 cut(s)	686, 716, 797, 1932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.