Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002235

Physical Location & Seq

Genomic Coordinates Forward (+)

15884788 .. 15894899

Gene Structure 10112 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1054400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGAGATTCATAATTGTGCGATCAAGCTGGTTAAGAGATAATCCTCAGAAAAGAAGAGACAAGGTTTACATTGGCTGTGGGGCTGGGTTTGGAGGTGACAGGCCTTTGGCAGCTCTTAAATTGCTACAAAGGGTCAAAGAGCTGAACTATATCGTGCTTGAATGTCTAGCAGAACGTACTCTTGCTGAGCGGTATCAAGTTATGGTGTCGGGTGGCGATGGTTACGACTCTAGGATTTCTGATTGGATGCGGTTGCTTCTACCTTTGGCTGTTGAGAGAGGAACCTGCATAATCACCAACATGGGTGCAATGGATCCACATGGCGCACAAGAGAAGGTTATAGAGATCGCCGGCAGCTTGGGGCTGAACATTTCTGTTGCTGTGGCTCATGAGGTTTCTATTACAAACACAGGTTCAGGATCCTCTCATGAGAAGTCATATATCATGGAAGGTGGTATTAGCACATATCTGGGAGCAGCTCCAATTGTCGAATGTTTGGAAAAGTATCAACCAAATGTAATAATTACTTCGCGGGTTGCAGACGCTGCCTTATTTTTAGCACCTATGATCTACGAACTTGGTTGGGACTGGGACAATCTGGAGCAGCTAGCACAGGGGTCTCTGGCAGGCCATCTTCTAGAGTGTGGCTGTCAACTAACAGGAGGCTACTTCATGCATCCAGGAGACAAATCTCGAGATATGTCTTTATCTCAGCTCCTGGATTTATCACTTCCTTATGCTGAAATTAGCTCTGATGGAAAAGTATGTGTGGCGAAGGCAGAGGGTAGTGGTGGAATTTTAAATATAAGTACTTGTGCTCAACAACTTCTTTATGAGGTTGGGGATCCAGGTGCTTATGTTACTCCTGACGTGATAATTGATATTCAGGATGTTTCATTTTACCCGTTATCAAGTTGTAAGGTTATCTGTGCTGGAGCAAAACCATCTGCAGTATCAGTGCCTGATAAACTCCTGCGGTTGGTTCCGAAAGACTTCGGTTGGAAAGGATGGGGAGAAATATCGTATGGCGGATATGAATGCGTTAAACGTGCCAAGGCTGCAGAGTTTCTGGTTAGATCATGGATTGAAGAAGTAATTCCTGGTGTTAGCAGCCATGTAATTTCATATATAATTGGGCTTGATAGCCTGAAGGCAACCAGTCTTAGTGACAATGCTTCATCTCGGATGGTTAGCGACATCAGGTTACGTATGGATGGGTTATTCAAGCTAAAGGAACATGCAGTCCAATTTATTAGAGAGTTTACTGCTTTGTATACAAATGGACCAGCTGGCGGTGGTGGTATCAGCACCGGACACAAGAAAGAGATAATCCTTGAAAAATATTTGGTCAAGCGGGAACACGTACTCTGGCGGACTGCAGTAAAGCACACCAAAGTGATAGATTCAAGTAATTCAGGAATCCGAGTTGAAGGTGGCACAAATATCTGTCCTCTGTATGAGTCTGCATTGCCATTGACACATTCTAATGAAGTCAATTCTTCTACAAATTTGGATAACCGATTTTCTGGAAGTGCAAAATCTCCTGCTCCATCTGGTCGGAAGATTCCACTCTATGATGTAGCACATGTCCGGGCTGGAGACAAAGGAAATGACTTGAATTTTTCCATCATCCCTCATTTTCCTCCAGATATAATGAGATTAAAGTCGATCGTAACACCCCAGTGGGTAAAGAAAGTGGTCTCAGCCCTTCTAAACTCGTCTTCATTCCCAGACATGGATGCTATCAACGAAAGAGACAAATGGATCCATGAAAATGTAAGGGTGGAAATTTATGAAGTTAGGGGAATCCGATCACTAAATGTTGTGGTTCGGGACATTCTTGACGGTGGTGTTAACTGCTCTAGAAGGATTGACCGACACGGAAAGACCACCTCAGATCTCATACTGTGCCAGCAAGTTGTGTTGCCTCCATGGTTGGGTCGTTCCAATACTCTTATAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AtuA

Protein Analysis

655

Amino Acids

71.63

Weight (kDa)

6.94

Isoelectric Point (pI)

35.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AtuA	PF07287	22 - 455	2.2e-100	Acyclic terpene utilisation family protein AtuA
AtuA_ferredoxin	PF23544	522 - 640	6.7e-44	AtuA ferredoxin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01770
fragaria_vesca	FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830
malus_domestica	MD01G1054400.v1.1 MD10G1234500.v1.1
prunus_persica	Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1
pyrus_communis	pycom01g07960 pycom06g04950 pycom07g13860 pycom07g13870
rosa_chinensis	RchiOBHm_Chr1g0354021 RchiOBHm_Chr1g0354041
rosa_laevigata	RLG00000028232 RLG00000028235
rosa_multiflora	Rmu_sc0004632.1_g000002 Rmu_sc0004632.1_g000004 Rmu_sc0025756.1_g000001 Rmu_sc0031149.1_g000001 Rmu_sc0031810.1_g000001
rosa_roxburghii	Rroxscaffold_4G00301280 Rroxscaffold_4G00301310 Rroxscaffold_4G00301330
rosa_rugosa	Rorug01G0240300 Rorug01G0240500
rosa_samantha	Rh1AG251600 Rh1BG223200 Rh1BG223400 Rh1CG236000 Rh1DG250100 Rh1DG250300
rosa_wichuraiana	Rw1G021940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	293
AccBSI	CCGCTC	1 cut(s)	190
AccI	GTMKAC	1 cut(s)	1274
AccII	CGCG	1 cut(s)	532
AciI	CCGC	8 cut(s)	190, 250, 532, 976, 1029, 1293, 1354, 1372
AclWI	GGATC	8 cut(s)	308, 321, 414, 427, 839, 852, 1759, 1772
AcsI	RAATTY	4 cut(s)	795, 1507, 1618, 1788
AcuI	CTGAAG	1 cut(s)	1169
AfaI	GTAC	3 cut(s)	178, 811, 1365
AfiI	CCNNNNNNNGG	4 cut(s)	979, 1292, 1735, 1937
AflIII	ACRYGT	2 cut(s)	1360, 1585
AgsI	TTSAA	7 cut(s)	161, 1088, 1225, 1337, 1407, 1430, 1618
AjiI	CACGTC	1 cut(s)	871
AjnI	CCWGG	4 cut(s)	679, 717, 847, 1099
AleI	CACNNNNGTG	2 cut(s)	1394, 1681
AloI	GAACNNNNNNTCC	2 cut(s)	1227, 1259
Alw21I	GWGCWC	1 cut(s)	820
Alw26I	GTCTC	6 cut(s)	51, 624, 678, 1593, 1705, 1749
AlwI	GGATC	8 cut(s)	308, 321, 414, 427, 839, 852, 1759, 1772
AlwNI	CAGNNNCTG	3 cut(s)	545, 718, 962
Ama87I	CYCGRG	1 cut(s)	693
AoxI	GGCC	2 cut(s)	101, 628
ApeKI	GCWGC	7 cut(s)	110, 354, 476, 545, 604, 1058, 1110
ApoI	RAATTY	4 cut(s)	795, 1507, 1618, 1788
Asp700I	GAANNNNTTC	2 cut(s)	992, 1095
AspLEI	GCGC	1 cut(s)	326
AspS9I	GGNCC	1 cut(s)	1283
AsuC2I	CCSGG	1 cut(s)	1592
AsuHPI	GGTGA	2 cut(s)	107, 286
AsuNHI	GCTAGC	1 cut(s)	607
AvaI	CYCGRG	1 cut(s)	693
AvaII	GGWCC	1 cut(s)	1283
BamHI	GGATCC	4 cut(s)	313, 419, 844, 1764
BbsI	GAAGAC	1 cut(s)	1713
Bbv12I	GWGCWC	1 cut(s)	820
BbvI	GCAGC	7 cut(s)	122, 366, 488, 532, 616, 1045, 1122
BccI	CCATC	9 cut(s)	212, 639, 749, 952, 1002, 1180, 1208, 1558, 1634
BciT130I	CCWGG	4 cut(s)	681, 719, 849, 1101
BcnI	CCSGG	1 cut(s)	1592
BcoDI	GTCTC	6 cut(s)	51, 624, 678, 1593, 1705, 1749
BfaI	CTAG	5 cut(s)	167, 231, 608, 638, 1863
BfmI	CTRYAG	3 cut(s)	948, 1059, 1377
BfuAI	ACCTGC	1 cut(s)	293
BglII	AGATCT	1 cut(s)	1897
BisI	GCNGC	7 cut(s)	111, 355, 477, 546, 605, 1059, 1111
BlpI	GCTNAGC	1 cut(s)	186
BlsI	GCNGC	7 cut(s)	112, 356, 478, 547, 606, 1060, 1112
BmcAI	AGTACT	1 cut(s)	811
Bme1390I	CCNGG	5 cut(s)	681, 719, 849, 1101, 1592
Bme18I	GGWCC	1 cut(s)	1283
BmeT110I	CYCGRG	1 cut(s)	693
BmgBI	CACGTC	1 cut(s)	871
BmgT120I	GGNCC	1 cut(s)	1283
BmiI	GGNNCC	6 cut(s)	283, 315, 421, 846, 984, 1766
BmrFI	CCNGG	5 cut(s)	681, 719, 849, 1101, 1592
BmrI	ACTGGG	2 cut(s)	598, 1675
BmsI	GCATC	3 cut(s)	237, 685, 1729
BmtI	GCTAGC	1 cut(s)	611
BmuI	ACTGGG	2 cut(s)	598, 1675
BpiI	GAAGAC	1 cut(s)	1713
BpmI	CTGGAG	4 cut(s)	620, 954, 1617, 1629
Bpu1102I	GCTNAGC	1 cut(s)	186
BpuMI	CCSGG	1 cut(s)	1592
BsaAI	YACGTR	2 cut(s)	1208, 1363
BsaI	GGTCTC	2 cut(s)	624, 1705
BsaJI	CCNNGG	2 cut(s)	1053, 1931
BsaWI	WCCGGW	1 cut(s)	1310
Bsc4I	CCNNNNNNNGG	4 cut(s)	979, 1292, 1735, 1937
Bse118I	RCCGGY	1 cut(s)	350
Bse1I	ACTGG	3 cut(s)	593, 1158, 1681
Bse3DI	GCAATG	2 cut(s)	315, 1466
BseBI	CCWGG	4 cut(s)	681, 719, 849, 1101
BseDI	CCNNGG	2 cut(s)	1053, 1931
BseGI	GGATG	8 cut(s)	252, 676, 895, 1013, 1191, 1219, 1629, 1744
BseLI	CCNNNNNNNGG	4 cut(s)	979, 1292, 1735, 1937
BseMI	GCAATG	2 cut(s)	315, 1466
BseMII	CTCAG	5 cut(s)	59, 177, 725, 1716, 1908
BseNI	ACTGG	3 cut(s)	593, 1158, 1681
BseXI	GCAGC	7 cut(s)	122, 366, 488, 532, 616, 1045, 1122
BseYI	CCCAGC	1 cut(s)	83
Bsh1236I	CGCG	1 cut(s)	532
Bsh1285I	CGRYCG	1 cut(s)	1671
BshFI	GGCC	2 cut(s)	103, 630
BsiEI	CGRYCG	1 cut(s)	1671
BsiHKAI	GWGCWC	1 cut(s)	820
BsiHKCI	CYCGRG	1 cut(s)	693
BsiSI	CCGG	3 cut(s)	351, 1311, 1591
BslFI	GGGAC	3 cut(s)	599, 605, 1847
BslI	CCNNNNNNNGG	4 cut(s)	979, 1292, 1735, 1937
BsmAI	GTCTC	6 cut(s)	51, 624, 678, 1593, 1705, 1749
BsmFI	GGGAC	3 cut(s)	599, 605, 1847
BsmI	GAATGC	1 cut(s)	1043
BsnI	GGCC	2 cut(s)	103, 630
Bso31I	GGTCTC	2 cut(s)	624, 1705
BsoBI	CYCGRG	1 cut(s)	693
Bsp1286I	GDGCHC	1 cut(s)	820
Bsp1720I	GCTNAGC	1 cut(s)	186
Bsp19I	CCATGG	1 cut(s)	1931
BspACI	CCGC	8 cut(s)	190, 250, 532, 976, 1029, 1293, 1354, 1372
BspANI	GGCC	2 cut(s)	103, 630
BspCNI	CTCAG	5 cut(s)	58, 178, 724, 1715, 1907
BspFNI	CGCG	1 cut(s)	532
BspHI	TCATGA	2 cut(s)	388, 427
BspLI	GGNNCC	6 cut(s)	283, 315, 421, 846, 984, 1766
BspMAI	CTGCAG	3 cut(s)	952, 1063, 1381
BspMI	ACCTGC	1 cut(s)	293
BspOI	GCTAGC	1 cut(s)	611
BspPI	GGATC	8 cut(s)	308, 321, 414, 427, 839, 852, 1759, 1772
BspTNI	GGTCTC	2 cut(s)	624, 1705
BsrBI	CCGCTC	1 cut(s)	190
BsrDI	GCAATG	2 cut(s)	315, 1466
BsrFI	RCCGGY	1 cut(s)	350
BsrI	ACTGG	3 cut(s)	593, 1158, 1681
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	2 cut(s)	1053, 1931
BssNAI	GTATAC	1 cut(s)	1275
BssT1I	CCWWGG	2 cut(s)	1053, 1931
Bst1107I	GTATAC	1 cut(s)	1275
Bst2UI	CCWGG	4 cut(s)	681, 719, 849, 1101
Bst4CI	ACNGT	2 cut(s)	1847, 1908
Bst6I	CTCTTC	1 cut(s)	49
BstAPI	GCANNNNNTGC	1 cut(s)	545
BstBAI	YACGTR	2 cut(s)	1208, 1363
BstC8I	GCNNGC	5 cut(s)	352, 609, 628, 1291, 1913
BstDEI	CTNAG	6 cut(s)	45, 186, 711, 1163, 1702, 1894
BstDSI	CCRYGG	1 cut(s)	1931
BstF5I	GGATG	8 cut(s)	252, 676, 895, 1013, 1191, 1219, 1629, 1744
BstFNI	CGCG	1 cut(s)	532
BstHHI	GCGC	1 cut(s)	326
BstMAI	GTCTC	6 cut(s)	51, 624, 678, 1593, 1705, 1749
BstMCI	CGRYCG	1 cut(s)	1671
BstMWI	GCNNNNNNNGC	2 cut(s)	545, 1058
BstNI	CCWGG	4 cut(s)	681, 719, 849, 1101
BstNSI	RCATGY	2 cut(s)	1241, 1589
BstSCI	CCNGG	5 cut(s)	679, 717, 847, 1099, 1590
BstSFI	CTRYAG	3 cut(s)	948, 1059, 1377
BstSNI	TACGTA	1 cut(s)	1208
BstUI	CGCG	1 cut(s)	532
BstV1I	GCAGC	7 cut(s)	122, 366, 488, 532, 616, 1045, 1122
BstV2I	GAAGAC	1 cut(s)	1713
BstX2I	RGATCY	5 cut(s)	313, 419, 844, 1764, 1897
BstYI	RGATCY	5 cut(s)	313, 419, 844, 1764, 1897
BstZ17I	GTATAC	1 cut(s)	1275
BsuRI	GGCC	2 cut(s)	103, 630
BtgI	CCRYGG	1 cut(s)	1931
BtgZI	GCGATG	1 cut(s)	231
BtrI	CACGTC	1 cut(s)	871
BtsCI	GGATG	8 cut(s)	252, 676, 895, 1013, 1191, 1219, 1629, 1744
BtsIMutI	CAGTG	2 cut(s)	963, 1688
BveI	ACCTGC	1 cut(s)	293
Cac8I	GCNNGC	5 cut(s)	352, 609, 628, 1291, 1913
CaiI	CAGNNNCTG	3 cut(s)	545, 718, 962
CciI	TCATGA	2 cut(s)	388, 427
CfoI	GCGC	1 cut(s)	326
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	1 cut(s)	1283
CseI	GACGC	1 cut(s)	551
Csp6I	GTAC	3 cut(s)	177, 810, 1364
CviQI	GTAC	3 cut(s)	177, 810, 1364
DdeI	CTNAG	6 cut(s)	45, 186, 711, 1163, 1702, 1894
DraI	TTTAAA	1 cut(s)	801
Eam1104I	CTCTTC	1 cut(s)	49
EarI	CTCTTC	1 cut(s)	49
EciI	GGCGGA	2 cut(s)	1044, 1387
Eco105I	TACGTA	1 cut(s)	1208
Eco130I	CCWWGG	2 cut(s)	1053, 1931
Eco147I	AGGCCT	1 cut(s)	103
Eco31I	GGTCTC	2 cut(s)	624, 1705
Eco47I	GGWCC	1 cut(s)	1283
Eco57I	CTGAAG	1 cut(s)	1169
Eco88I	CYCGRG	1 cut(s)	693
EcoRII	CCWGG	4 cut(s)	679, 717, 847, 1099
EcoT14I	CCWWGG	2 cut(s)	1053, 1931
EcoT22I	ATGCAT	1 cut(s)	678
ErhI	CCWWGG	2 cut(s)	1053, 1931
FaqI	GGGAC	3 cut(s)	599, 605, 1847
FauI	CCCGC	2 cut(s)	525, 1347
FblI	GTMKAC	1 cut(s)	1274
Fnu4HI	GCNGC	7 cut(s)	111, 355, 477, 546, 605, 1059, 1111
FokI	GGATG	8 cut(s)	259, 663, 902, 1020, 1198, 1226, 1616, 1751
Fsp4HI	GCNGC	7 cut(s)	111, 355, 477, 546, 605, 1059, 1111
FspBI	CTAG	5 cut(s)	167, 231, 608, 638, 1863
GlaI	GCGC	1 cut(s)	325
GluI	GCNGC	7 cut(s)	111, 355, 477, 546, 605, 1059, 1111
GsaI	CCCAGC	1 cut(s)	87
GsuI	CTGGAG	4 cut(s)	620, 954, 1617, 1629
HaeIII	GGCC	2 cut(s)	103, 630
HapII	CCGG	3 cut(s)	351, 1311, 1591
HgaI	GACGC	1 cut(s)	551
HhaI	GCGC	1 cut(s)	326
Hin6I	GCGC	1 cut(s)	324
HinP1I	GCGC	1 cut(s)	324
HincII	GTYRAC	2 cut(s)	653, 1855
HindII	GTYRAC	2 cut(s)	653, 1855
HinfI	GANTC	7 cut(s)	6, 227, 1403, 1419, 1460, 1564, 1806
HpaI	GTTAAC	1 cut(s)	1855
HpaII	CCGG	3 cut(s)	351, 1311, 1591
HphI	GGTGA	2 cut(s)	107, 286
Hpy166II	GTNNAC	5 cut(s)	67, 653, 1263, 1275, 1855
Hpy188I	TCNGA	9 cut(s)	48, 241, 754, 987, 1185, 1424, 1560, 1811, 1897
Hpy8I	GTNNAC	5 cut(s)	67, 653, 1263, 1275, 1855
HpyAV	CCTTC	7 cut(s)	328, 443, 769, 1144, 1424, 1718, 1860
HpyCH4III	ACNGT	2 cut(s)	1847, 1908
HpyCH4IV	ACGT	5 cut(s)	175, 870, 1048, 1207, 1362
HpyF10VI	GCNNNNNNNGC	2 cut(s)	545, 1058
HpyF3I	CTNAG	6 cut(s)	45, 186, 711, 1163, 1702, 1894
HpySE526I	ACGT	5 cut(s)	175, 870, 1048, 1207, 1362
HspAI	GCGC	1 cut(s)	324
KroI	GCCGGC	1 cut(s)	350
KroNI	GCCGGC	1 cut(s)	352
KspAI	GTTAAC	1 cut(s)	1855
LmnI	GCTCC	6 cut(s)	473, 484, 601, 720, 935, 1552
Lsp1109I	GCAGC	7 cut(s)	122, 366, 488, 532, 616, 1045, 1122
LweI	GCATC	3 cut(s)	237, 685, 1729
MaeI	CTAG	5 cut(s)	167, 231, 608, 638, 1863
MaeII	ACGT	5 cut(s)	175, 870, 1048, 1207, 1362
MaeIII	GTNAC	6 cut(s)	95, 221, 859, 1166, 1203, 1672
MbiI	CCGCTC	1 cut(s)	190
MboII	GAAGA	6 cut(s)	66, 626, 1100, 1491, 1573, 1713
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	5 cut(s)	313, 419, 844, 1764, 1897
MhlI	GDGCHC	1 cut(s)	820
MlyI	GAGTC	2 cut(s)	221, 1469
MmeI	TCCRAC	2 cut(s)	980, 1538
Mph1103I	ATGCAT	1 cut(s)	678
MroNI	GCCGGC	1 cut(s)	350
MroXI	GAANNNNTTC	2 cut(s)	992, 1095
MseI	TTAA	6 cut(s)	32, 117, 800, 1044, 1661, 1854
MslI	CAYNNNNRTG	6 cut(s)	14, 299, 1394, 1485, 1681, 1773
MspA1I	CMGCKG	1 cut(s)	1289
MspI	CCGG	3 cut(s)	351, 1311, 1591
MspR9I	CCNGG	5 cut(s)	681, 719, 849, 1101, 1592
MunI	CAATTG	1 cut(s)	483
Mva1269I	GAATGC	1 cut(s)	1043
MvaI	CCWGG	4 cut(s)	681, 719, 849, 1101
MvnI	CGCG	1 cut(s)	532
MwoI	GCNNNNNNNGC	2 cut(s)	545, 1058
NaeI	GCCGGC	1 cut(s)	352
NciI	CCSGG	1 cut(s)	1592
NcoI	CCATGG	1 cut(s)	1931
NgoMIV	GCCGGC	1 cut(s)	350
NheI	GCTAGC	1 cut(s)	607
NlaIV	GGNNCC	6 cut(s)	283, 315, 421, 846, 984, 1766
NmuCI	GTSAC	2 cut(s)	95, 1166
NsiI	ATGCAT	1 cut(s)	678
NspI	RCATGY	2 cut(s)	1241, 1589
OliI	CACNNNNGTG	2 cut(s)	1394, 1681
PaeR7I	CTCGAG	1 cut(s)	693
PagI	TCATGA	2 cut(s)	388, 427
PceI	AGGCCT	1 cut(s)	103
PciI	ACATGT	1 cut(s)	1585
PctI	GAATGC	1 cut(s)	1043
PdiI	GCCGGC	1 cut(s)	352
PdmI	GAANNNNTTC	2 cut(s)	992, 1095
PfeI	GAWTC	5 cut(s)	6, 1403, 1419, 1564, 1806
PfoI	TCCNGGA	2 cut(s)	679, 717
PkrI	GCNGC	7 cut(s)	112, 356, 478, 547, 606, 1060, 1112
Ple19I	CGATCG	1 cut(s)	1671
PleI	GAGTC	2 cut(s)	221, 1468
PpsI	GAGTC	2 cut(s)	221, 1468
Ppu21I	YACGTR	2 cut(s)	1208, 1363
PscI	ACATGT	1 cut(s)	1585
Psp6I	CCWGG	4 cut(s)	679, 717, 847, 1099
PspFI	CCCAGC	1 cut(s)	83
PspGI	CCWGG	4 cut(s)	679, 717, 847, 1099
PspN4I	GGNNCC	6 cut(s)	283, 315, 421, 846, 984, 1766
PspPI	GGNCC	1 cut(s)	1283
PstI	CTGCAG	3 cut(s)	952, 1063, 1381
PstNI	CAGNNNCTG	3 cut(s)	545, 718, 962
PsuI	RGATCY	5 cut(s)	313, 419, 844, 1764, 1897
PvuI	CGATCG	1 cut(s)	1671
PvuII	CAGCTG	1 cut(s)	1289
RsaI	GTAC	3 cut(s)	178, 811, 1365
RsaNI	GTAC	3 cut(s)	177, 810, 1364
RseI	CAYNNNNRTG	6 cut(s)	14, 299, 1394, 1485, 1681, 1773
SaqAI	TTAA	6 cut(s)	32, 117, 800, 1044, 1661, 1854
SatI	GCNGC	7 cut(s)	111, 355, 477, 546, 605, 1059, 1111
Sau96I	GGNCC	1 cut(s)	1283
ScaI	AGTACT	1 cut(s)	811
SchI	GAGTC	2 cut(s)	221, 1469
ScrFI	CCNGG	5 cut(s)	681, 719, 849, 1101, 1592
SduI	GDGCHC	1 cut(s)	820
SfaNI	GCATC	3 cut(s)	237, 685, 1729
SfcI	CTRYAG	3 cut(s)	948, 1059, 1377
Sfr274I	CTCGAG	1 cut(s)	693
SinI	GGWCC	1 cut(s)	1283
SlaI	CTCGAG	1 cut(s)	693
SmiMI	CAYNNNNRTG	6 cut(s)	14, 299, 1394, 1485, 1681, 1773
SmlI	CTYRAG	1 cut(s)	693
SmoI	CTYRAG	1 cut(s)	693
SnaBI	TACGTA	1 cut(s)	1208
SseBI	AGGCCT	1 cut(s)	103
SsiI	CCGC	8 cut(s)	190, 250, 532, 976, 1029, 1293, 1354, 1372
SspI	AATATT	1 cut(s)	1343
SspMI	CTAG	5 cut(s)	167, 231, 608, 638, 1863
StuI	AGGCCT	1 cut(s)	103
StyD4I	CCNGG	5 cut(s)	679, 717, 847, 1099, 1590
StyI	CCWWGG	2 cut(s)	1053, 1931
TaaI	ACNGT	2 cut(s)	1847, 1908
TaiI	ACGT	5 cut(s)	178, 873, 1051, 1210, 1365
TaqI	TCGA	3 cut(s)	489, 694, 1667
TaqII	GACCGA	1 cut(s)	1890
TatI	WGTACW	1 cut(s)	809
TfiI	GAWTC	5 cut(s)	6, 1403, 1419, 1564, 1806
Tru1I	TTAA	6 cut(s)	32, 117, 800, 1044, 1661, 1854
Tru9I	TTAA	6 cut(s)	32, 117, 800, 1044, 1661, 1854
TscAI	CASTG	2 cut(s)	963, 1688
TseFI	GTSAC	2 cut(s)	95, 1166
TseI	GCWGC	7 cut(s)	110, 354, 476, 545, 604, 1058, 1110
Tsp45I	GTSAC	2 cut(s)	95, 1166
TspDTI	ATGAA	9 cut(s)	661, 885, 1050, 1113, 1167, 1503, 1713, 1785, 1809
TspGWI	ACGGA	1 cut(s)	1896
TspRI	CASTG	2 cut(s)	963, 1688
VpaK11BI	GGWCC	1 cut(s)	1283
XapI	RAATTY	4 cut(s)	795, 1507, 1618, 1788
XbaI	TCTAGA	2 cut(s)	637, 1862
XceI	RCATGY	2 cut(s)	1241, 1589
XhoI	CTCGAG	1 cut(s)	693
XmiI	GTMKAC	1 cut(s)	1274
XmnI	GAANNNNTTC	2 cut(s)	992, 1095
XspI	CTAG	5 cut(s)	167, 231, 608, 638, 1863
ZrmI	AGTACT	1 cut(s)	811
Zsp2I	ATGCAT	1 cut(s)	678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.