AT1G03495

transferase activity, transferring acyl groups other than amino-acyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005947
Physical Location & Seq
Forward (+)
873166 .. 874476
1311 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G03495.1

Sequence Viewer

Length: 1041 bp
ATGGCGGCTCAACTTCAACCTTATAACATCATCGAGACCTGTCACATCTCTCCCCCAAAGGGCACCGTTGCATCCACCACTCTTCCTCTCACCTTCTTCGATGCCCCCTGGCTCTCTCTCCCACTCGCCGATTCTCTCTTCTTCTTCTCTTACCAAAACTCAACTGAATCTTTCCTCCAAGACTTTGTACCCAACCTCAAACATTCCCTCTCCATCACTCTCCAACATTTCTTCCCTTACGCCGGTAAACTGATTATCCCGCCTCGTCCCGACCCTCCATATTTACACTACAACGCTGGCGAAGACTCTCTTGTTTTCACCGTAGCAGAGTCTACTGAAACCGACTTCGACCAACTGAAGTCTGATTCCCCTAAAGATATCAGTGTGTTGCATGGCGTCTTGCCCAAGTTACCTCCTCCTCACGTCTCTCCGGAAGGAATTCAGATGCGACCAATAATGGCAATGCAAGTCACCATCTTCCCTGGAGCTGGAATCTGTATAGGCAACTCAGCTACACATGTTGTAGCAGATGGAGTCACCTTCAGTCATTTCATGAAGTATTGGATGTCATTGACCAAATCCAGCGGCAAAGATCCGGCCACGGTTCTTCTACCCTCTCTGCCTATTCACAGCTGCAGAAACATAATCAAGGACCCAGGAGAGGTAGCCGCAGGACATTTGGAGCGGTTTTGGAGCCAAAACTCTGCAAAACACAGTTCACATGTTACGCCTGAGAACATGGTCAGAGCCACTTTTACATTGAGCCGGAAGCAGATAGACAATCTCAAGAGTTGGGTTACAGAGCAGTCTGAGAATCAATCTCCTGTTTCTACCTTCGTGGTGACTCTAGCTTTCATTTGGGTAAGCTTGATTAAGACACTTGTTCAAGACAGTGAAACAGAGGCCAAGGACGAAGTCTTTCACTTGATGATCAACGTGGATTGCAGGAATCGTCTCAAGTACACACAACCAATACCACAAACATACTTTGGCAACTGTATGGCTCCTGGTATCGTATCAGTCAAGAACACGATTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

346

Amino Acids

38.46

Weight (kDa)

6.21

Isoelectric Point (pI)

51.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 10 - 335 5.1e-35 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 24
AccB1I GGYRCC 1 cut(s) 62
AccBSI CCGCTC 1 cut(s) 685
AccI GTMKAC 1 cut(s) 332
AccIII TCCGGA 1 cut(s) 430
AciI CCGC 5 cut(s) 5, 260, 585, 669, 685
AclWI GGATC 1 cut(s) 587
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 1 cut(s) 438
AcuI CTGAAG 2 cut(s) 377, 526
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 2 cut(s) 189, 962
AfiI CCNNNNNNNGG 4 cut(s) 59, 242, 488, 661
AflIII ACRYGT 2 cut(s) 517, 721
AgsI TTSAA 2 cut(s) 17, 887
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 4 cut(s) 107, 481, 655, 1006
AluBI AGCT 5 cut(s) 488, 512, 633, 851, 867
AluI AGCT 5 cut(s) 488, 512, 633, 851, 867
Alw26I GTCTC 3 cut(s) 29, 430, 959
AlwI GGATC 1 cut(s) 587
Aor13HI TCCGGA 1 cut(s) 430
AoxI GGCC 2 cut(s) 597, 903
ApeKI GCWGC 1 cut(s) 633
ApoI RAATTY 1 cut(s) 438
Asp700I GAANNNNTTC 2 cut(s) 438, 918
AspS9I GGNCC 1 cut(s) 652
AsuHPI GGTGA 5 cut(s) 82, 310, 463, 529, 853
AvaII GGWCC 1 cut(s) 652
BaeGI GKGCMC 1 cut(s) 65
BanI GGYRCC 1 cut(s) 62
BbsI GAAGAC 1 cut(s) 309
BbvI GCAGC 1 cut(s) 620
BccI CCATC 3 cut(s) 221, 482, 524
BciT130I CCWGG 4 cut(s) 109, 483, 657, 1008
BclI TGATCA 1 cut(s) 930
BcoDI GTCTC 3 cut(s) 29, 430, 959
BfaI CTAG 2 cut(s) 848, 1039
BfmI CTRYAG 1 cut(s) 634
BisI GCNGC 4 cut(s) 6, 586, 634, 669
BlsI GCNGC 4 cut(s) 7, 587, 635, 670
Bme1390I CCNGG 4 cut(s) 109, 483, 657, 1008
Bme18I GGWCC 1 cut(s) 652
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 1 cut(s) 652
BmiI GGNNCC 4 cut(s) 64, 654, 695, 1005
BmrFI CCNGG 4 cut(s) 109, 483, 657, 1008
BmsI GCATC 3 cut(s) 80, 91, 435
BpiI GAAGAC 1 cut(s) 309
BpmI CTGGAG 1 cut(s) 504
BpuEI CTTGAG 2 cut(s) 770, 941
BsaHI GRCGYC 1 cut(s) 396
BsaI GGTCTC 1 cut(s) 29
BsaJI CCNNGG 5 cut(s) 107, 481, 600, 655, 906
BsaWI WCCGGW 1 cut(s) 430
Bsc4I CCNNNNNNNGG 4 cut(s) 59, 242, 488, 661
Bse118I RCCGGY 1 cut(s) 242
Bse3DI GCAATG 1 cut(s) 468
BseAI TCCGGA 1 cut(s) 430
BseBI CCWGG 4 cut(s) 109, 483, 657, 1008
BseDI CCNNGG 5 cut(s) 107, 481, 600, 655, 906
BseGI GGATG 2 cut(s) 71, 570
BseLI CCNNNNNNNGG 4 cut(s) 59, 242, 488, 661
BseMI GCAATG 1 cut(s) 468
BseMII CTCAG 3 cut(s) 522, 723, 801
BseRI GAGGAG 2 cut(s) 405, 408
BseSI GKGCMC 1 cut(s) 65
BseXI GCAGC 1 cut(s) 620
BshFI GGCC 2 cut(s) 599, 905
BshNI GGYRCC 1 cut(s) 62
BsiSI CCGG 4 cut(s) 243, 431, 596, 766
BslFI GGGAC 1 cut(s) 252
BslI CCNNNNNNNGG 4 cut(s) 59, 242, 488, 661
BsmAI GTCTC 3 cut(s) 29, 430, 959
BsmBI CGTCTC 2 cut(s) 430, 959
BsmFI GGGAC 1 cut(s) 252
BsnI GGCC 2 cut(s) 599, 905
Bso31I GGTCTC 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 65
Bsp13I TCCGGA 1 cut(s) 430
Bsp143I GATC 2 cut(s) 592, 930
BspACI CCGC 5 cut(s) 5, 260, 585, 669, 685
BspANI GGCC 2 cut(s) 599, 905
BspCNI CTCAG 3 cut(s) 521, 724, 802
BspEI TCCGGA 1 cut(s) 430
BspHI TCATGA 1 cut(s) 552
BspLI GGNNCC 4 cut(s) 64, 654, 695, 1005
BspMAI CTGCAG 1 cut(s) 638
BspPI GGATC 1 cut(s) 587
BspT107I GGYRCC 1 cut(s) 62
BspTNI GGTCTC 1 cut(s) 29
BsrBI CCGCTC 1 cut(s) 685
BsrDI GCAATG 1 cut(s) 468
BsrFI RCCGGY 1 cut(s) 242
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 5 cut(s) 107, 481, 600, 655, 906
BssMI GATC 2 cut(s) 592, 930
BssNI GRCGYC 1 cut(s) 396
BssT1I CCWWGG 1 cut(s) 906
Bst2UI CCWGG 4 cut(s) 109, 483, 657, 1008
Bst4CI ACNGT 6 cut(s) 67, 322, 604, 716, 893, 998
Bst6I CTCTTC 2 cut(s) 87, 143
BstACI GRCGYC 1 cut(s) 396
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 3 cut(s) 508, 732, 810
BstDSI CCRYGG 1 cut(s) 600
BstF5I GGATG 2 cut(s) 71, 570
BstKTI GATC 2 cut(s) 595, 933
BstMAI GTCTC 3 cut(s) 29, 430, 959
BstMBI GATC 2 cut(s) 592, 930
BstNI CCWGG 4 cut(s) 109, 483, 657, 1008
BstNSI RCATGY 2 cut(s) 521, 725
BstSCI CCNGG 4 cut(s) 107, 481, 655, 1006
BstSFI CTRYAG 1 cut(s) 634
BstSLI GKGCMC 1 cut(s) 65
BstV1I GCAGC 1 cut(s) 620
BstV2I GAAGAC 1 cut(s) 309
BstX2I RGATCY 1 cut(s) 592
BstYI RGATCY 1 cut(s) 592
BsuRI GGCC 2 cut(s) 599, 905
BtgI CCRYGG 1 cut(s) 600
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 2 cut(s) 71, 570
BtsIMutI CAGTG 2 cut(s) 388, 898
Cac8I GCNNGC 1 cut(s) 298
CciI TCATGA 1 cut(s) 552
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 1 cut(s) 652
CseI GACGC 1 cut(s) 385
Csp6I GTAC 2 cut(s) 188, 961
CviAII CATG 5 cut(s) 392, 518, 553, 722, 739
CviQI GTAC 2 cut(s) 188, 961
DdeI CTNAG 3 cut(s) 508, 732, 810
DpnI GATC 2 cut(s) 594, 932
DpnII GATC 2 cut(s) 592, 930
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 2 cut(s) 87, 143
EarI CTCTTC 2 cut(s) 87, 143
Eco130I CCWWGG 1 cut(s) 906
Eco31I GGTCTC 1 cut(s) 29
Eco32I GATATC 1 cut(s) 379
Eco47I GGWCC 1 cut(s) 652
Eco57I CTGAAG 2 cut(s) 377, 526
EcoO109I RGGNCCY 1 cut(s) 652
EcoRI GAATTC 1 cut(s) 438
EcoRII CCWGG 4 cut(s) 107, 481, 655, 1006
EcoRV GATATC 1 cut(s) 379
EcoT14I CCWWGG 1 cut(s) 906
ErhI CCWWGG 1 cut(s) 906
Esp3I CGTCTC 2 cut(s) 430, 959
FaeI CATG 5 cut(s) 395, 521, 556, 725, 742
FalI AAGNNNNNCTT 2 cut(s) 294, 326
FaqI GGGAC 1 cut(s) 252
FatI CATG 5 cut(s) 391, 517, 552, 721, 738
FauI CCCGC 1 cut(s) 267
FbaI TGATCA 1 cut(s) 930
FblI GTMKAC 1 cut(s) 332
Fnu4HI GCNGC 4 cut(s) 6, 586, 634, 669
FokI GGATG 2 cut(s) 58, 577
Fsp4HI GCNGC 4 cut(s) 6, 586, 634, 669
FspBI CTAG 2 cut(s) 848, 1039
GluI GCNGC 4 cut(s) 6, 586, 634, 669
GsuI CTGGAG 1 cut(s) 504
HaeIII GGCC 2 cut(s) 599, 905
HapII CCGG 4 cut(s) 243, 431, 596, 766
HgaI GACGC 1 cut(s) 385
Hin1I GRCGYC 1 cut(s) 396
Hin1II CATG 5 cut(s) 395, 521, 556, 725, 742
HindIII AAGCTT 1 cut(s) 865
HpaII CCGG 4 cut(s) 243, 431, 596, 766
HphI GGTGA 5 cut(s) 82, 310, 463, 529, 853
Hpy166II GTNNAC 4 cut(s) 248, 333, 719, 963
Hpy188I TCNGA 4 cut(s) 364, 444, 746, 811
Hpy188III TCNNGA 7 cut(s) 34, 269, 431, 553, 787, 887, 1024
Hpy8I GTNNAC 4 cut(s) 248, 333, 719, 963
HpyAV CCTTC 4 cut(s) 103, 428, 550, 844
HpyCH4III ACNGT 6 cut(s) 67, 322, 604, 716, 893, 998
HpyCH4IV ACGT 2 cut(s) 423, 936
HpyCH4V TGCA 6 cut(s) 71, 391, 466, 636, 707, 945
HpyF3I CTNAG 3 cut(s) 508, 732, 810
HpySE526I ACGT 2 cut(s) 423, 936
Hsp92I GRCGYC 1 cut(s) 396
Hsp92II CATG 5 cut(s) 395, 521, 556, 725, 742
Kpn2I TCCGGA 1 cut(s) 430
Ksp22I TGATCA 1 cut(s) 930
Kzo9I GATC 2 cut(s) 592, 930
LmnI GCTCC 4 cut(s) 485, 682, 693, 1009
Lsp1109I GCAGC 1 cut(s) 620
LweI GCATC 3 cut(s) 80, 91, 435
MaeI CTAG 2 cut(s) 848, 1039
MaeII ACGT 2 cut(s) 423, 936
MaeIII GTNAC 7 cut(s) 41, 408, 469, 535, 724, 796, 841
MalI GATC 2 cut(s) 594, 932
MbiI CCGCTC 1 cut(s) 685
MboI GATC 2 cut(s) 592, 930
MboII GAAGA 9 cut(s) 74, 88, 130, 133, 136, 223, 314, 469, 599
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 1 cut(s) 65
MluCI AATT 1 cut(s) 438
MlyI GAGTC 4 cut(s) 299, 338, 543, 838
MmeI TCCRAC 1 cut(s) 247
MroI TCCGGA 1 cut(s) 430
MroXI GAANNNNTTC 2 cut(s) 438, 918
MseI TTAA 1 cut(s) 873
MspA1I CMGCKG 2 cut(s) 585, 633
MspI CCGG 4 cut(s) 243, 431, 596, 766
MspR9I CCNGG 4 cut(s) 109, 483, 657, 1008
MvaI CCWGG 4 cut(s) 109, 483, 657, 1008
NdeII GATC 2 cut(s) 592, 930
NlaIII CATG 5 cut(s) 395, 521, 556, 725, 742
NlaIV GGNNCC 4 cut(s) 64, 654, 695, 1005
NmuCI GTSAC 4 cut(s) 41, 469, 535, 841
NspI RCATGY 2 cut(s) 521, 725
PagI TCATGA 1 cut(s) 552
PciI ACATGT 2 cut(s) 517, 721
PdmI GAANNNNTTC 2 cut(s) 438, 918
PfeI GAWTC 6 cut(s) 131, 167, 365, 492, 814, 949
PflFI GACNNNGTC 1 cut(s) 914
PkrI GCNGC 4 cut(s) 7, 587, 635, 670
PleI GAGTC 4 cut(s) 299, 337, 542, 838
PpsI GAGTC 4 cut(s) 299, 337, 542, 838
PpuMI RGGWCCY 1 cut(s) 652
PscI ACATGT 2 cut(s) 517, 721
PsiI TTATAA 1 cut(s) 24
Psp5II RGGWCCY 1 cut(s) 652
Psp6I CCWGG 4 cut(s) 107, 481, 655, 1006
PspGI CCWGG 4 cut(s) 107, 481, 655, 1006
PspN4I GGNNCC 4 cut(s) 64, 654, 695, 1005
PspPI GGNCC 1 cut(s) 652
PspPPI RGGWCCY 1 cut(s) 652
PstI CTGCAG 1 cut(s) 638
PsuI RGATCY 1 cut(s) 592
PsyI GACNNNGTC 1 cut(s) 914
PvuII CAGCTG 1 cut(s) 633
RsaI GTAC 2 cut(s) 189, 962
RsaNI GTAC 2 cut(s) 188, 961
SaqAI TTAA 1 cut(s) 873
SatI GCNGC 4 cut(s) 6, 586, 634, 669
Sau3AI GATC 2 cut(s) 592, 930
Sau96I GGNCC 1 cut(s) 652
SchI GAGTC 4 cut(s) 299, 338, 543, 838
ScrFI CCNGG 4 cut(s) 109, 483, 657, 1008
SduI GDGCHC 1 cut(s) 65
SfaNI GCATC 3 cut(s) 80, 91, 435
SfcI CTRYAG 1 cut(s) 634
SinI GGWCC 1 cut(s) 652
SmlI CTYRAG 2 cut(s) 785, 956
SmoI CTYRAG 2 cut(s) 785, 956
Sse9I AATT 1 cut(s) 438
SsiI CCGC 5 cut(s) 5, 260, 585, 669, 685
SspMI CTAG 2 cut(s) 848, 1039
StyD4I CCNGG 4 cut(s) 107, 481, 655, 1006
StyI CCWWGG 1 cut(s) 906
TaaI ACNGT 6 cut(s) 67, 322, 604, 716, 893, 998
TaiI ACGT 2 cut(s) 426, 939
TaqI TCGA 3 cut(s) 33, 99, 348
TasI AATT 1 cut(s) 438
TatI WGTACW 1 cut(s) 960
TauI GCSGC 3 cut(s) 8, 588, 671
TfiI GAWTC 6 cut(s) 131, 167, 365, 492, 814, 949
Tru1I TTAA 1 cut(s) 873
Tru9I TTAA 1 cut(s) 873
TscAI CASTG 2 cut(s) 388, 898
TseFI GTSAC 4 cut(s) 41, 469, 535, 841
TseI GCWGC 1 cut(s) 633
Tsp45I GTSAC 4 cut(s) 41, 469, 535, 841
TspDTI ATGAA 3 cut(s) 541, 569, 844
TspRI CASTG 2 cut(s) 388, 898
Tth111I GACNNNGTC 1 cut(s) 914
VpaK11BI GGWCC 1 cut(s) 652
XapI RAATTY 1 cut(s) 438
XceI RCATGY 2 cut(s) 521, 725
XmiI GTMKAC 1 cut(s) 332
XmnI GAANNNNTTC 2 cut(s) 438, 918
XspI CTAG 2 cut(s) 848, 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.