Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005947

Physical Location & Seq

Genomic Coordinates Forward (+)

970367 .. 972046

Gene Structure 1680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G010800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGGCTAGACTCTCCAAAGTCAAAGTTCTTGAGCAATGCCAAGTCTCTCCCCCACCAAACTCCTGCTCACCTGATATTTCACAAACCTCTCTCCCTCTGACCTTCCTTGACATACCATGGCTCTTCTTCTCTCCAAGCCTACCTCTTTTCTTCTATGAATTCCCATTTCCCACTTGTCATTTCACTTCCACCGTCCTCCCAAACCTCAAGCACTCTCTCTCCCTCACTCTCCAACACTTTTACCCTTTCGCCGGAACCCTAGTGGCCCTGCCCGAACCCGGCATTCCCGAGCTCGTCTACACCCAAGGTGACTCGGTTTCGGTGACCGTTGTCGAGTCAGATGGAGACTTTGTATATCTTTCAAGCAATTTCCCAAGAGAAGTGGAAGAATTTTACACACTTGTGCCTGAACTAGCATCAAGTAGTAGTTTTGCACCTATTAGTAATGCTACTACACAAGCAGCCAAACTTCCTTTGTCAAGTGTTCAAATTACAGTGTTCCCAAATTGTGGGATTTGCATTGGACTTGCATATCATCATGTTGTTGCTGATGGGAGGACCTTCAACAATTTCATCAAGGCTTGGGCCTCATTCTCTAGGCTTGGAGATTCATCAAAAGTAGACGTACGATCAAAGCCCTCTTATGATCGTACGACTATTGTTGATCCATATGGGTTGGAGGCTATCTTCTTGAAGGAGTGGTGGAAGCGAATTTCTTCACAAGGCTTGGTTCTTCTTGGTCCTAGTTATAATAATGGACATTCAACGAACGTGGTTAGGGCCACTTTTTTGGTGGACTTGGCCCAAATGGAGGGCATCAAGAACTGGATTATTGCTTTATGCAACAAGGGAAATGAGCCACATCCGGTACATTTATCGCCATATGTCCTAACATGTGCATTTCTGTGGGTTTGCTTGGTCAAAATCCAAGAAAATGATCTTAATCACAACATTTGGTGTGGTGAAGATCCGAATTATTTTGGGTTTATTGCGGGCGGGTTAACCCGTATGGGTCATCCAGTACCGCCTACATATGTCGGTAATTGCGTTGGGTTTGGCCGGTCGATGGCGGTGAGGAAGGACTTGTTGGGAGAAAATGGAATTGTTATTGCGGCAAGGGCAATTGGAAACACTATTAAGAAGCTAGACAAGGAAATTTTGGGAGGTGCAGAGAAGTGGATATCTGAGTGGGAGGTGATGTTCGGGTCGGAGCTTCATGTTATGGTTTTCGGGTCACCTAAGGTGGATCTTTATGAGACAGATTTTGGATGGGGAAGGCCCAAAAAGATAGAGGATATTGGAATTGATGGTGCAAAAGCTATTTCACTCACTGAGAGTAGAGACATATTGGGCGGGATTGAGGTTGGCTTGGTCCTACCAAAGCCTCAAATGGAGGCTTTTAAAACTTTTCTCATCGAGGGACTCGATGCTTTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

480

Amino Acids

52.84

Weight (kDa)

5.52

Isoelectric Point (pI)

37.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03495 AT1G03940
fragaria_vesca	FvH4_6g44510 FvH4_7g00870
malus_domestica	MD07G1008000.v1.1 MD09G1097600.v1.1 MD17G1085800.v1.1 MD17G1085900.v1.1
prunus_persica	Prupe.2G010800_v2.0.a1
pyrus_communis	pycom07g00670
rosa_chinensis	RchiOBHm_Chr1g0315741 RchiOBHm_Chr1g0358611
rosa_laevigata	RLG00000027941 RLG00000030735
rosa_multiflora	Rmu_sc0001609.1_g000021 Rmu_sc0004180.1_g000004
rosa_roxburghii	Rroxscaffold_4G00331460
rosa_rugosa	Rorug01G0005400
rosa_samantha	Rh1AG016200 Rh1AG278100 Rh1BG008600 Rh1BG244600 Rh1CG261500 Rh1DG009200 Rh1DG272900
rosa_wichuraiana	Rw1G000950 Rw1G024680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
AccB7I	CCANNNNNTGG	1 cut(s)	509
AccI	GTMKAC	2 cut(s)	297, 621
AciI	CCGC	6 cut(s)	992, 996, 1025, 1070, 1112, 1353
AclWI	GGATC	3 cut(s)	659, 962, 1254
AcoI	YGGCCR	1 cut(s)	1057
AcsI	RAATTY	4 cut(s)	158, 389, 711, 1155
AfaI	GTAC	4 cut(s)	627, 652, 870, 1023
AfiI	CCNNNNNNNGG	5 cut(s)	251, 278, 509, 811, 1066
AflIII	ACRYGT	1 cut(s)	893
AgsI	TTSAA	5 cut(s)	363, 488, 565, 694, 765
AjuI	GAANNNNNNNTTGG	2 cut(s)	1070, 1102
AleI	CACNNNNGTG	1 cut(s)	401
AloI	GAACNNNNNNTCC	2 cut(s)	1184, 1216
AluBI	AGCT	4 cut(s)	292, 1144, 1213, 1319
AluI	AGCT	4 cut(s)	292, 1144, 1213, 1319
Alw21I	GWGCWC	1 cut(s)	294
Alw26I	GTCTC	4 cut(s)	49, 339, 1250, 1335
AlwI	GGATC	3 cut(s)	659, 962, 1254
Ama87I	CYCGRG	1 cut(s)	287
AoxI	GGCC	6 cut(s)	264, 585, 780, 801, 1057, 1277
ApeKI	GCWGC	1 cut(s)	461
ApoI	RAATTY	4 cut(s)	158, 389, 711, 1155
Asp700I	GAANNNNTTC	1 cut(s)	715
AspS9I	GGNCC	8 cut(s)	265, 558, 585, 740, 780, 802, 1278, 1372
AsuC2I	CCSGG	1 cut(s)	279
AsuHPI	GGTGA	7 cut(s)	60, 320, 334, 974, 1084, 1207, 1227
AvaI	CYCGRG	1 cut(s)	287
AvaII	GGWCC	3 cut(s)	558, 740, 1372
AxyI	CCTNAGG	1 cut(s)	1239
BanII	GRGCYC	1 cut(s)	294
Bbv12I	GWGCWC	1 cut(s)	294
BbvI	GCAGC	1 cut(s)	473
BccI	CCATC	5 cut(s)	335, 545, 1060, 1263, 1301
BcnI	CCSGG	1 cut(s)	279
BcoDI	GTCTC	4 cut(s)	49, 339, 1250, 1335
BfaI	CTAG	6 cut(s)	6, 260, 413, 597, 744, 1145
BisI	GCNGC	2 cut(s)	462, 1113
BlsI	GCNGC	2 cut(s)	463, 1114
Bme1390I	CCNGG	1 cut(s)	279
Bme18I	GGWCC	3 cut(s)	558, 740, 1372
BmeT110I	CYCGRG	1 cut(s)	287
BmgT120I	GGNCC	8 cut(s)	265, 558, 585, 740, 780, 802, 1278, 1372
BmiI	GGNNCC	1 cut(s)	256
BmrFI	CCNGG	1 cut(s)	279
BmsI	GCATC	3 cut(s)	425, 825, 1417
BoxI	GACNNNNGTC	1 cut(s)	329
BpuEI	CTTGAG	2 cut(s)	50, 191
BpuMI	CCSGG	1 cut(s)	279
BsaBI	GATNNNNATC	1 cut(s)	942
BsaJI	CCNNGG	2 cut(s)	116, 304
BsaWI	WCCGGW	1 cut(s)	865
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 336, 366, 1184, 1214
Bsc4I	CCNNNNNNNGG	5 cut(s)	251, 278, 509, 811, 1066
Bse118I	RCCGGY	1 cut(s)	1059
Bse1I	ACTGG	2 cut(s)	830, 1019
Bse21I	CCTNAGG	1 cut(s)	1239
Bse3DI	GCAATG	1 cut(s)	41
Bse8I	GATNNNNATC	1 cut(s)	942
BseDI	CCNNGG	2 cut(s)	116, 304
BseGI	GGATG	3 cut(s)	862, 1015, 1274
BseJI	GATNNNNATC	1 cut(s)	942
BseLI	CCNNNNNNNGG	5 cut(s)	251, 278, 509, 811, 1066
BseMI	GCAATG	1 cut(s)	41
BseMII	CTCAG	2 cut(s)	1176, 1323
BseNI	ACTGG	2 cut(s)	830, 1019
BseXI	GCAGC	1 cut(s)	473
BsgI	GTGCAG	1 cut(s)	1188
Bsh1285I	CGRYCG	1 cut(s)	1064
BshFI	GGCC	6 cut(s)	266, 587, 782, 803, 1059, 1279
BsiEI	CGRYCG	1 cut(s)	1064
BsiHKAI	GWGCWC	1 cut(s)	294
BsiHKCI	CYCGRG	1 cut(s)	287
BsiSI	CCGG	4 cut(s)	252, 279, 866, 1060
BsiWI	CGTACG	2 cut(s)	625, 650
BslFI	GGGAC	1 cut(s)	1434
BslI	CCNNNNNNNGG	5 cut(s)	251, 278, 509, 811, 1066
BsmAI	GTCTC	4 cut(s)	49, 339, 1250, 1335
BsmFI	GGGAC	1 cut(s)	1434
BsmI	GAATGC	1 cut(s)	282
BsnI	GGCC	6 cut(s)	266, 587, 782, 803, 1059, 1279
BsoBI	CYCGRG	1 cut(s)	287
Bsp1286I	GDGCHC	1 cut(s)	294
Bsp143I	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
Bsp19I	CCATGG	1 cut(s)	116
BspACI	CCGC	6 cut(s)	992, 996, 1025, 1070, 1112, 1353
BspANI	GGCC	6 cut(s)	266, 587, 782, 803, 1059, 1279
BspCNI	CTCAG	2 cut(s)	1177, 1324
BspLI	GGNNCC	1 cut(s)	256
BspPI	GGATC	3 cut(s)	659, 962, 1254
BspQI	GCTCTTC	1 cut(s)	128
BsrDI	GCAATG	1 cut(s)	41
BsrFI	RCCGGY	1 cut(s)	1059
BsrI	ACTGG	2 cut(s)	830, 1019
BssAI	RCCGGY	1 cut(s)	1059
BssECI	CCNNGG	2 cut(s)	116, 304
BssMI	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
BssT1I	CCWWGG	2 cut(s)	116, 304
Bst4CI	ACNGT	3 cut(s)	193, 328, 496
Bst6I	CTCTTC	1 cut(s)	128
BstC8I	GCNNGC	1 cut(s)	994
BstDEI	CTNAG	3 cut(s)	1185, 1239, 1332
BstDSI	CCRYGG	1 cut(s)	116
BstEII	GGTNACC	2 cut(s)	322, 1233
BstF5I	GGATG	3 cut(s)	862, 1015, 1274
BstKTI	GATC	6 cut(s)	632, 649, 667, 940, 970, 1249
BstMAI	GTCTC	4 cut(s)	49, 339, 1250, 1335
BstMBI	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
BstMCI	CGRYCG	1 cut(s)	1064
BstMWI	GCNNNNNNNGC	1 cut(s)	1118
BstNSI	RCATGY	1 cut(s)	897
BstPAI	GACNNNNGTC	1 cut(s)	329
BstPI	GGTNACC	2 cut(s)	322, 1233
BstSCI	CCNGG	1 cut(s)	277
BstV1I	GCAGC	1 cut(s)	473
BstX2I	RGATCY	2 cut(s)	967, 1246
BstXI	CCANNNNNNTGG	1 cut(s)	790
BstYI	RGATCY	2 cut(s)	967, 1246
Bsu36I	CCTNAGG	1 cut(s)	1239
BsuRI	GGCC	6 cut(s)	266, 587, 782, 803, 1059, 1279
BtgI	CCRYGG	1 cut(s)	116
BtsCI	GGATG	3 cut(s)	862, 1015, 1274
BtsIMutI	CAGTG	2 cut(s)	501, 1329
Cac8I	GCNNGC	1 cut(s)	994
Cfr10I	RCCGGY	1 cut(s)	1059
Cfr13I	GGNCC	8 cut(s)	265, 558, 585, 740, 780, 802, 1278, 1372
Csp6I	GTAC	4 cut(s)	626, 651, 869, 1022
CspCI	CAANNNNNGTGG	4 cut(s)	363, 398, 753, 788
CviAII	CATG	4 cut(s)	117, 539, 894, 1217
CviQI	GTAC	4 cut(s)	626, 651, 869, 1022
DdeI	CTNAG	3 cut(s)	1185, 1239, 1332
DpnI	GATC	6 cut(s)	631, 648, 666, 939, 969, 1248
DpnII	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
DraI	TTTAAA	1 cut(s)	1402
EaeI	YGGCCR	1 cut(s)	1057
Eam1104I	CTCTTC	1 cut(s)	128
EarI	CTCTTC	1 cut(s)	128
Ecl136II	GAGCTC	1 cut(s)	292
Eco130I	CCWWGG	2 cut(s)	116, 304
Eco24I	GRGCYC	1 cut(s)	294
Eco32I	GATATC	1 cut(s)	1182
Eco47I	GGWCC	3 cut(s)	558, 740, 1372
Eco53kI	GAGCTC	1 cut(s)	292
Eco81I	CCTNAGG	1 cut(s)	1239
Eco88I	CYCGRG	1 cut(s)	287
Eco91I	GGTNACC	2 cut(s)	322, 1233
EcoICRI	GAGCTC	1 cut(s)	292
EcoO109I	RGGNCCY	1 cut(s)	558
EcoO65I	GGTNACC	2 cut(s)	322, 1233
EcoRI	GAATTC	1 cut(s)	158
EcoRV	GATATC	1 cut(s)	1182
EcoT14I	CCWWGG	2 cut(s)	116, 304
EcoT38I	GRGCYC	1 cut(s)	294
ErhI	CCWWGG	2 cut(s)	116, 304
FaeI	CATG	4 cut(s)	120, 542, 897, 1220
FaqI	GGGAC	1 cut(s)	1434
FatI	CATG	4 cut(s)	116, 538, 893, 1216
FauI	CCCGC	3 cut(s)	985, 989, 1346
FauNDI	CATATG	3 cut(s)	670, 883, 1033
FblI	GTMKAC	2 cut(s)	297, 621
Fnu4HI	GCNGC	2 cut(s)	462, 1113
FokI	GGATG	3 cut(s)	849, 1002, 1281
FriOI	GRGCYC	1 cut(s)	294
Fsp4HI	GCNGC	2 cut(s)	462, 1113
FspBI	CTAG	6 cut(s)	6, 260, 413, 597, 744, 1145
GluI	GCNGC	2 cut(s)	462, 1113
HaeIII	GGCC	6 cut(s)	266, 587, 782, 803, 1059, 1279
HapII	CCGG	4 cut(s)	252, 279, 866, 1060
Hin1II	CATG	4 cut(s)	120, 542, 897, 1220
HincII	GTYRAC	1 cut(s)	1002
HindII	GTYRAC	1 cut(s)	1002
HinfI	GANTC	5 cut(s)	9, 311, 335, 608, 1422
HpaI	GTTAAC	1 cut(s)	1002
HpaII	CCGG	4 cut(s)	252, 279, 866, 1060
HphI	GGTGA	7 cut(s)	60, 320, 334, 974, 1084, 1207, 1227
Hpy166II	GTNNAC	4 cut(s)	298, 622, 796, 1002
Hpy188I	TCNGA	5 cut(s)	99, 340, 972, 1186, 1210
Hpy188III	TCNNGA	5 cut(s)	29, 287, 691, 820, 1437
Hpy8I	GTNNAC	4 cut(s)	298, 622, 796, 1002
HpyAV	CCTTC	5 cut(s)	112, 571, 688, 1072, 1269
HpyCH4III	ACNGT	3 cut(s)	193, 328, 496
HpyCH4IV	ACGT	2 cut(s)	624, 771
HpyCH4V	TGCA	7 cut(s)	434, 519, 530, 843, 899, 1169, 1313
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1118
HpyF3I	CTNAG	3 cut(s)	1185, 1239, 1332
HpySE526I	ACGT	2 cut(s)	624, 771
Hsp92II	CATG	4 cut(s)	120, 542, 897, 1220
KspAI	GTTAAC	1 cut(s)	1002
Kzo9I	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
LguI	GCTCTTC	1 cut(s)	128
LmnI	GCTCC	1 cut(s)	1210
Lsp1109I	GCAGC	1 cut(s)	473
LweI	GCATC	3 cut(s)	425, 825, 1417
MaeI	CTAG	6 cut(s)	6, 260, 413, 597, 744, 1145
MaeII	ACGT	2 cut(s)	624, 771
MaeIII	GTNAC	3 cut(s)	308, 322, 1233
MalI	GATC	6 cut(s)	631, 648, 666, 939, 969, 1248
MboI	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
MboII	GAAGA	8 cut(s)	115, 118, 142, 398, 679, 708, 725, 977
MfeI	CAATTG	1 cut(s)	1122
MflI	RGATCY	2 cut(s)	967, 1246
MhlI	GDGCHC	1 cut(s)	294
MlyI	GAGTC	4 cut(s)	3, 305, 344, 1416
MmeI	TCCRAC	3 cut(s)	256, 657, 1188
MroXI	GAANNNNTTC	1 cut(s)	715
MseI	TTAA	4 cut(s)	942, 1001, 1137, 1401
MslI	CAYNNNNRTG	2 cut(s)	401, 904
MspI	CCGG	4 cut(s)	252, 279, 866, 1060
MspR9I	CCNGG	1 cut(s)	279
MunI	CAATTG	1 cut(s)	1122
Mva1269I	GAATGC	1 cut(s)	282
MwoI	GCNNNNNNNGC	1 cut(s)	1118
NciI	CCSGG	1 cut(s)	279
NcoI	CCATGG	1 cut(s)	116
NdeI	CATATG	3 cut(s)	670, 883, 1033
NdeII	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
NlaIII	CATG	4 cut(s)	120, 542, 897, 1220
NlaIV	GGNNCC	1 cut(s)	256
NmuCI	GTSAC	3 cut(s)	308, 322, 1233
NspI	RCATGY	1 cut(s)	897
OliI	CACNNNNGTG	1 cut(s)	401
PciI	ACATGT	1 cut(s)	893
PciSI	GCTCTTC	1 cut(s)	128
PcsI	WCGNNNNNNNCGW	2 cut(s)	1044, 1422
PctI	GAATGC	1 cut(s)	282
PdmI	GAANNNNTTC	1 cut(s)	715
PfeI	GAWTC	1 cut(s)	608
Pfl23II	CGTACG	2 cut(s)	625, 650
PflMI	CCANNNNNTGG	1 cut(s)	509
PkrI	GCNGC	2 cut(s)	463, 1114
PleI	GAGTC	4 cut(s)	3, 305, 343, 1416
PpsI	GAGTC	4 cut(s)	3, 305, 343, 1416
PpuMI	RGGWCCY	1 cut(s)	558
PscI	ACATGT	1 cut(s)	893
PshAI	GACNNNNGTC	1 cut(s)	329
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	294
Psp5II	RGGWCCY	1 cut(s)	558
PspEI	GGTNACC	2 cut(s)	322, 1233
PspLI	CGTACG	2 cut(s)	625, 650
PspN4I	GGNNCC	1 cut(s)	256
PspPI	GGNCC	8 cut(s)	265, 558, 585, 740, 780, 802, 1278, 1372
PspPPI	RGGWCCY	1 cut(s)	558
PsuI	RGATCY	2 cut(s)	967, 1246
RsaI	GTAC	4 cut(s)	627, 652, 870, 1023
RsaNI	GTAC	4 cut(s)	626, 651, 869, 1022
RseI	CAYNNNNRTG	2 cut(s)	401, 904
SacI	GAGCTC	1 cut(s)	294
SapI	GCTCTTC	1 cut(s)	128
SaqAI	TTAA	4 cut(s)	942, 1001, 1137, 1401
SatI	GCNGC	2 cut(s)	462, 1113
Sau3AI	GATC	6 cut(s)	629, 646, 664, 937, 967, 1246
Sau96I	GGNCC	8 cut(s)	265, 558, 585, 740, 780, 802, 1278, 1372
SchI	GAGTC	4 cut(s)	3, 305, 344, 1416
ScrFI	CCNGG	1 cut(s)	279
SduI	GDGCHC	1 cut(s)	294
SfaNI	GCATC	3 cut(s)	425, 825, 1417
SinI	GGWCC	3 cut(s)	558, 740, 1372
SmiMI	CAYNNNNRTG	2 cut(s)	401, 904
SmlI	CTYRAG	2 cut(s)	29, 206
SmoI	CTYRAG	2 cut(s)	29, 206
SsiI	CCGC	6 cut(s)	992, 996, 1025, 1070, 1112, 1353
SspMI	CTAG	6 cut(s)	6, 260, 413, 597, 744, 1145
SstI	GAGCTC	1 cut(s)	294
StyD4I	CCNGG	1 cut(s)	277
StyI	CCWWGG	2 cut(s)	116, 304
TaaI	ACNGT	3 cut(s)	193, 328, 496
TaiI	ACGT	2 cut(s)	627, 774
TaqI	TCGA	4 cut(s)	333, 1064, 1416, 1425
TauI	GCSGC	1 cut(s)	1115
TfiI	GAWTC	1 cut(s)	608
Tru1I	TTAA	4 cut(s)	942, 1001, 1137, 1401
Tru9I	TTAA	4 cut(s)	942, 1001, 1137, 1401
TscAI	CASTG	2 cut(s)	501, 1336
TseFI	GTSAC	3 cut(s)	308, 322, 1233
TseI	GCWGC	1 cut(s)	461
Tsp45I	GTSAC	3 cut(s)	308, 322, 1233
TspDTI	ATGAA	4 cut(s)	171, 562, 600, 1205
TspRI	CASTG	2 cut(s)	501, 1336
Van91I	CCANNNNNTGG	1 cut(s)	509
VpaK11BI	GGWCC	3 cut(s)	558, 740, 1372
XapI	RAATTY	4 cut(s)	158, 389, 711, 1155
XceI	RCATGY	1 cut(s)	897
XcmI	CCANNNNNNNNNTGG	1 cut(s)	790
XmiI	GTMKAC	2 cut(s)	297, 621
XmnI	GAANNNNTTC	1 cut(s)	715
XspI	CTAG	6 cut(s)	6, 260, 413, 597, 744, 1145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.