AT1G03940

transferase activity, transferring acyl groups other than amino-acyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005947
Physical Location & Seq
Reverse (-)
1009228 .. 1011145
1918 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G03940.1

Sequence Viewer

Length: 1410 bp
ATGGTGGCTCATCTTCAACCTCCTAAGATCATCGAGACCTGTCACATCTCTCCCCCAAAGGGCACCGTTCCATCAACCACTCTTCCTCTCACCTTCTTCGATGCCCCCTGGCTCTCTCTCCCACTCGCCGATTCTCTCTTCTTCTTCTCTTACCAAAACTCAACTGAATCTTTCCTCCAAGACTTTGTACCCAACCTCAAACATTCCCTCTCCATCACTCTCCAACATTTCTTCCCTTACGCCGGTAAACTGATTATCCCGCCTCGTCCCGACCCTCCATATTTACACTACAACGATGGCCAAGACTCTCTTGTTTTCACCGTAGCAGAGTCTACTGAAACCGACTTCGACCAACTGAAGTCTGATTCCCCTAAAGATATCAGTGTGTTGCATGGCGTCTTGCCCAAGTTACCTCCTCCTCACGTCTCTCCGGAAGGAATTCAGATGCGACCAATAATGGCTATGCAAGTCACCATCTTCCCTGGAGCTGGAATCTGTATAGGCAACTCAGCTACACATGTTGTAGCAGATGGAGTCACCTTCAGTCATTTCATGAAGTATTGGATGTCATTGACCAAATCCAGCGGTAAAGATCCCGCCACGGTTCTTCTACCCTCTCTGCCTATTCACAGCTGCAGAAACATGATCAAGGACCCAGGCGAGGTAGGCGCAGGACATTTGGAGCGGTTTTGGAGCCAAAACTCTGCAAAACACAGTTCACATGTTACGCCTGAGAACATGGTCAGAGCCACTTTTACATTGAGCCGGAAGCAGATAGATAATCTAAAAAGTTGGGTTACAGAGCAGTCTGAGAATCAATCTCCTGTTTCTACCTTCGTGGTGACTCTAGCTTTCATTTGGGTAAGCTTGATCAAGACACTTGTACAAGACAGTGAAACAAAGGCCAACGAGGAAGACAAGGATGAAGTATTTCACTTGATGATCAATGTGGATTGCAGGAATCGCCTCAAGTACACACAACCAATACCACAAACATACTTTGGCAACTGTATGGCTCCTGGTATCGTATCAGTCAAGAAACACGATTTGCTAGGAGAAAAATGCGTTTTGGCGGCTTCAGATGCAATCACAGCGAGAATCAAAGATATGTTATCAAGCGATCTGTTGAAGACAGCACCAAGATGGGGACAAGGAGTACGTAAATGGGTCATGTCCCATTATCCAACCTCAATTGCAGGAGCTCCGAAATTGGGACTGTATGACATGGATTTTGGATTAGGAAAGCCCTGCAAAATGGAGATCGTGCACATAGAAACAGGTGGTTCTATCGCATTCTCAGAGTCCAGAGACGGCAGCAATGGAGTTGAGATTGGAATAGCACTAGAGAAGAAGAAAATGGATGTGTTTGACTCAATTCTACAACAGGGGATCAAGAAATTCGCAACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

469

Amino Acids

51.93

Weight (kDa)

6.63

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 14 - 458 4.3e-45 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 62
AccBSI CCGCTC 1 cut(s) 685
AccI GTMKAC 1 cut(s) 332
AccIII TCCGGA 1 cut(s) 430
AciI CCGC 5 cut(s) 260, 585, 597, 685, 1073
AclWI GGATC 2 cut(s) 587, 1397
AcoI YGGCCR 1 cut(s) 298
AcsI RAATTY 2 cut(s) 438, 1397
AcuI CTGAAG 3 cut(s) 377, 526, 1062
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 4 cut(s) 189, 885, 974, 1158
AfiI CCNNNNNNNGG 6 cut(s) 59, 242, 488, 661, 1145, 1211
AflIII ACRYGT 2 cut(s) 517, 721
AgsI TTSAA 2 cut(s) 17, 1129
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 4 cut(s) 107, 481, 655, 1018
AluBI AGCT 6 cut(s) 488, 512, 633, 851, 867, 1202
AluI AGCT 6 cut(s) 488, 512, 633, 851, 867, 1202
Alw21I GWGCWC 2 cut(s) 1204, 1269
Alw26I GTCTC 3 cut(s) 29, 430, 1302
Alw44I GTGCAC 1 cut(s) 1265
AlwI GGATC 2 cut(s) 587, 1397
Aor13HI TCCGGA 1 cut(s) 430
AoxI GGCC 2 cut(s) 298, 903
ApaLI GTGCAC 1 cut(s) 1265
ApeKI GCWGC 2 cut(s) 633, 1314
ApoI RAATTY 2 cut(s) 438, 1397
ArsI GACNNNNNNTTYG 2 cut(s) 1214, 1246
Asp700I GAANNNNTTC 2 cut(s) 438, 930
AspLEI GCGC 1 cut(s) 671
AspS9I GGNCC 1 cut(s) 652
AsuHPI GGTGA 5 cut(s) 82, 310, 463, 529, 853
AvaII GGWCC 1 cut(s) 652
BaeGI GKGCMC 2 cut(s) 65, 1269
BalI TGGCCA 1 cut(s) 300
BanI GGYRCC 1 cut(s) 62
BanII GRGCYC 1 cut(s) 1204
BbsI GAAGAC 2 cut(s) 921, 1136
Bbv12I GWGCWC 2 cut(s) 1204, 1269
BbvI GCAGC 2 cut(s) 620, 1326
BccI CCATC 6 cut(s) 79, 221, 290, 482, 524, 1137
BceAI ACGGC 1 cut(s) 1327
BciT130I CCWGG 4 cut(s) 109, 483, 657, 1020
BclI TGATCA 3 cut(s) 645, 870, 942
BcoDI GTCTC 3 cut(s) 29, 430, 1302
BfaI CTAG 3 cut(s) 848, 1052, 1343
BfmI CTRYAG 1 cut(s) 634
BisI GCNGC 3 cut(s) 634, 1074, 1315
BlsI GCNGC 3 cut(s) 635, 1075, 1316
Bme1390I CCNGG 4 cut(s) 109, 483, 657, 1020
Bme18I GGWCC 1 cut(s) 652
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 1 cut(s) 652
BmiI GGNNCC 4 cut(s) 64, 654, 695, 1017
BmrFI CCNGG 4 cut(s) 109, 483, 657, 1020
BmsI GCATC 3 cut(s) 91, 435, 1072
BpiI GAAGAC 2 cut(s) 921, 1136
BpmI CTGGAG 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 953
BsaAI YACGTR 1 cut(s) 1160
BsaHI GRCGYC 1 cut(s) 396
BsaI GGTCTC 1 cut(s) 29
BsaJI CCNNGG 4 cut(s) 107, 481, 600, 655
BsaWI WCCGGW 1 cut(s) 430
Bsc4I CCNNNNNNNGG 6 cut(s) 59, 242, 488, 661, 1145, 1211
Bse118I RCCGGY 1 cut(s) 242
Bse3DI GCAATG 1 cut(s) 1324
BseAI TCCGGA 1 cut(s) 430
BseBI CCWGG 4 cut(s) 109, 483, 657, 1020
BseDI CCNNGG 4 cut(s) 107, 481, 600, 655
BseGI GGATG 3 cut(s) 570, 928, 1366
BseLI CCNNNNNNNGG 6 cut(s) 59, 242, 488, 661, 1145, 1211
BseMI GCAATG 1 cut(s) 1324
BseMII CTCAG 4 cut(s) 522, 723, 801, 1311
BseRI GAGGAG 2 cut(s) 405, 408
BseSI GKGCMC 2 cut(s) 65, 1269
BseXI GCAGC 2 cut(s) 620, 1326
BshFI GGCC 2 cut(s) 300, 905
BshNI GGYRCC 1 cut(s) 62
BsiHKAI GWGCWC 2 cut(s) 1204, 1269
BsiSI CCGG 3 cut(s) 243, 431, 766
BslFI GGGAC 4 cut(s) 252, 1159, 1161, 1227
BslI CCNNNNNNNGG 6 cut(s) 59, 242, 488, 661, 1145, 1211
BsmAI GTCTC 3 cut(s) 29, 430, 1302
BsmBI CGTCTC 2 cut(s) 430, 1302
BsmFI GGGAC 4 cut(s) 252, 1159, 1161, 1227
BsmI GAATGC 1 cut(s) 1292
BsnI GGCC 2 cut(s) 300, 905
Bso31I GGTCTC 1 cut(s) 29
Bsp1286I GDGCHC 3 cut(s) 65, 1204, 1269
Bsp13I TCCGGA 1 cut(s) 430
Bsp1407I TGTACA 1 cut(s) 883
Bsp143I GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
BspACI CCGC 5 cut(s) 260, 585, 597, 685, 1073
BspANI GGCC 2 cut(s) 300, 905
BspCNI CTCAG 4 cut(s) 521, 724, 802, 1310
BspEI TCCGGA 1 cut(s) 430
BspHI TCATGA 1 cut(s) 552
BspLI GGNNCC 4 cut(s) 64, 654, 695, 1017
BspMAI CTGCAG 1 cut(s) 638
BspPI GGATC 2 cut(s) 587, 1397
BspT107I GGYRCC 1 cut(s) 62
BspTNI GGTCTC 1 cut(s) 29
BsrBI CCGCTC 1 cut(s) 685
BsrDI GCAATG 1 cut(s) 1324
BsrFI RCCGGY 1 cut(s) 242
BsrGI TGTACA 1 cut(s) 883
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 4 cut(s) 107, 481, 600, 655
BssMI GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
BssNI GRCGYC 1 cut(s) 396
Bst2UI CCWGG 4 cut(s) 109, 483, 657, 1020
Bst4CI ACNGT 7 cut(s) 67, 322, 604, 716, 893, 1010, 1218
Bst6I CTCTTC 2 cut(s) 87, 143
BstACI GRCGYC 1 cut(s) 396
BstAUI TGTACA 1 cut(s) 883
BstBAI YACGTR 1 cut(s) 1160
BstDEI CTNAG 5 cut(s) 24, 508, 732, 810, 1297
BstDSI CCRYGG 1 cut(s) 600
BstF5I GGATG 3 cut(s) 570, 928, 1366
BstHHI GCGC 1 cut(s) 671
BstKTI GATC 8 cut(s) 30, 595, 648, 873, 945, 1123, 1263, 1392
BstMAI GTCTC 3 cut(s) 29, 430, 1302
BstMBI GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
BstMWI GCNNNNNNNGC 4 cut(s) 666, 963, 1082, 1091
BstNI CCWGG 4 cut(s) 109, 483, 657, 1020
BstNSI RCATGY 2 cut(s) 521, 725
BstSCI CCNGG 4 cut(s) 107, 481, 655, 1018
BstSFI CTRYAG 1 cut(s) 634
BstSLI GKGCMC 2 cut(s) 65, 1269
BstSNI TACGTA 1 cut(s) 1160
BstV1I GCAGC 2 cut(s) 620, 1326
BstV2I GAAGAC 2 cut(s) 921, 1136
BstX2I RGATCY 1 cut(s) 592
BstYI RGATCY 1 cut(s) 592
BsuRI GGCC 2 cut(s) 300, 905
BtgI CCRYGG 1 cut(s) 600
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 3 cut(s) 570, 928, 1366
BtsIMutI CAGTG 2 cut(s) 388, 898
CciI TCATGA 1 cut(s) 552
CfoI GCGC 1 cut(s) 671
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 1 cut(s) 652
CseI GACGC 1 cut(s) 385
Csp6I GTAC 4 cut(s) 188, 884, 973, 1157
CviAII CATG 8 cut(s) 392, 518, 553, 643, 722, 739, 1171, 1225
CviQI GTAC 4 cut(s) 188, 884, 973, 1157
DdeI CTNAG 5 cut(s) 24, 508, 732, 810, 1297
DpnI GATC 8 cut(s) 29, 594, 647, 872, 944, 1122, 1262, 1391
DpnII GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
EaeI YGGCCR 1 cut(s) 298
Eam1104I CTCTTC 2 cut(s) 87, 143
EarI CTCTTC 2 cut(s) 87, 143
Ecl136II GAGCTC 1 cut(s) 1202
Eco105I TACGTA 1 cut(s) 1160
Eco24I GRGCYC 1 cut(s) 1204
Eco31I GGTCTC 1 cut(s) 29
Eco32I GATATC 1 cut(s) 379
Eco47I GGWCC 1 cut(s) 652
Eco53kI GAGCTC 1 cut(s) 1202
Eco57I CTGAAG 3 cut(s) 377, 526, 1062
EcoICRI GAGCTC 1 cut(s) 1202
EcoO109I RGGNCCY 1 cut(s) 652
EcoRI GAATTC 1 cut(s) 438
EcoRII CCWGG 4 cut(s) 107, 481, 655, 1018
EcoRV GATATC 1 cut(s) 379
EcoT38I GRGCYC 1 cut(s) 1204
Esp3I CGTCTC 2 cut(s) 430, 1302
FaeI CATG 8 cut(s) 395, 521, 556, 646, 725, 742, 1174, 1228
FalI AAGNNNNNCTT 2 cut(s) 294, 326
FaqI GGGAC 4 cut(s) 252, 1159, 1161, 1227
FatI CATG 8 cut(s) 391, 517, 552, 642, 721, 738, 1170, 1224
FauI CCCGC 2 cut(s) 267, 604
FbaI TGATCA 3 cut(s) 645, 870, 942
FblI GTMKAC 1 cut(s) 332
Fnu4HI GCNGC 3 cut(s) 634, 1074, 1315
FokI GGATG 3 cut(s) 577, 935, 1373
FriOI GRGCYC 1 cut(s) 1204
Fsp4HI GCNGC 3 cut(s) 634, 1074, 1315
FspBI CTAG 3 cut(s) 848, 1052, 1343
GlaI GCGC 1 cut(s) 670
GluI GCNGC 3 cut(s) 634, 1074, 1315
GsuI CTGGAG 1 cut(s) 504
HaeIII GGCC 2 cut(s) 300, 905
HapII CCGG 3 cut(s) 243, 431, 766
HgaI GACGC 1 cut(s) 385
HhaI GCGC 1 cut(s) 671
Hin1I GRCGYC 1 cut(s) 396
Hin1II CATG 8 cut(s) 395, 521, 556, 646, 725, 742, 1174, 1228
Hin6I GCGC 1 cut(s) 669
HinP1I GCGC 1 cut(s) 669
HindIII AAGCTT 1 cut(s) 865
HpaII CCGG 3 cut(s) 243, 431, 766
HphI GGTGA 5 cut(s) 82, 310, 463, 529, 853
Hpy166II GTNNAC 5 cut(s) 248, 333, 719, 975, 1267
Hpy188I TCNGA 7 cut(s) 364, 444, 746, 811, 1081, 1206, 1300
Hpy188III TCNNGA 8 cut(s) 34, 269, 431, 553, 874, 1036, 1305, 1393
Hpy8I GTNNAC 5 cut(s) 248, 333, 719, 975, 1267
HpyAV CCTTC 4 cut(s) 103, 428, 550, 844
HpyCH4III ACNGT 7 cut(s) 67, 322, 604, 716, 893, 1010, 1218
HpyCH4IV ACGT 3 cut(s) 423, 1159, 1406
HpyCH4V TGCA 9 cut(s) 391, 466, 636, 707, 957, 1085, 1196, 1251, 1267
HpyF10VI GCNNNNNNNGC 4 cut(s) 666, 963, 1082, 1091
HpyF3I CTNAG 5 cut(s) 24, 508, 732, 810, 1297
HpySE526I ACGT 3 cut(s) 423, 1159, 1406
Hsp92I GRCGYC 1 cut(s) 396
Hsp92II CATG 8 cut(s) 395, 521, 556, 646, 725, 742, 1174, 1228
HspAI GCGC 1 cut(s) 669
Kpn2I TCCGGA 1 cut(s) 430
Ksp22I TGATCA 3 cut(s) 645, 870, 942
Kzo9I GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
LmnI GCTCC 6 cut(s) 485, 682, 693, 1021, 1199, 1207
Lsp1109I GCAGC 2 cut(s) 620, 1326
LweI GCATC 3 cut(s) 91, 435, 1072
MaeI CTAG 3 cut(s) 848, 1052, 1343
MaeII ACGT 3 cut(s) 423, 1159, 1406
MaeIII GTNAC 7 cut(s) 41, 408, 469, 535, 724, 796, 841
MalI GATC 8 cut(s) 29, 594, 647, 872, 944, 1122, 1262, 1391
MbiI CCGCTC 1 cut(s) 685
MboI GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
MfeI CAATTG 1 cut(s) 1191
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 3 cut(s) 65, 1204, 1269
MlsI TGGCCA 1 cut(s) 300
MluCI AATT 5 cut(s) 438, 1191, 1208, 1374, 1397
MluNI TGGCCA 1 cut(s) 300
MlyI GAGTC 6 cut(s) 299, 338, 543, 838, 1310, 1364
MmeI TCCRAC 2 cut(s) 247, 1208
Mox20I TGGCCA 1 cut(s) 300
MroI TCCGGA 1 cut(s) 430
MroXI GAANNNNTTC 2 cut(s) 438, 930
MscI TGGCCA 1 cut(s) 300
MslI CAYNNNNRTG 1 cut(s) 1141
Msp20I TGGCCA 1 cut(s) 300
MspA1I CMGCKG 2 cut(s) 585, 633
MspI CCGG 3 cut(s) 243, 431, 766
MspR9I CCNGG 4 cut(s) 109, 483, 657, 1020
MunI CAATTG 1 cut(s) 1191
Mva1269I GAATGC 1 cut(s) 1292
MvaI CCWGG 4 cut(s) 109, 483, 657, 1020
MwoI GCNNNNNNNGC 4 cut(s) 666, 963, 1082, 1091
NdeII GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
NlaIII CATG 8 cut(s) 395, 521, 556, 646, 725, 742, 1174, 1228
NlaIV GGNNCC 4 cut(s) 64, 654, 695, 1017
NmuCI GTSAC 4 cut(s) 41, 469, 535, 841
NspI RCATGY 2 cut(s) 521, 725
PagI TCATGA 1 cut(s) 552
PciI ACATGT 2 cut(s) 517, 721
PctI GAATGC 1 cut(s) 1292
PdmI GAANNNNTTC 2 cut(s) 438, 930
PfeI GAWTC 7 cut(s) 131, 167, 365, 492, 814, 961, 1098
PkrI GCNGC 3 cut(s) 635, 1075, 1316
PleI GAGTC 6 cut(s) 299, 337, 542, 838, 1309, 1364
PpsI GAGTC 6 cut(s) 299, 337, 542, 838, 1309, 1364
Ppu21I YACGTR 1 cut(s) 1160
PpuMI RGGWCCY 1 cut(s) 652
PscI ACATGT 2 cut(s) 517, 721
Psp124BI GAGCTC 1 cut(s) 1204
Psp5II RGGWCCY 1 cut(s) 652
Psp6I CCWGG 4 cut(s) 107, 481, 655, 1018
PspGI CCWGG 4 cut(s) 107, 481, 655, 1018
PspN4I GGNNCC 4 cut(s) 64, 654, 695, 1017
PspPI GGNCC 1 cut(s) 652
PspPPI RGGWCCY 1 cut(s) 652
PstI CTGCAG 1 cut(s) 638
PsuI RGATCY 1 cut(s) 592
PvuII CAGCTG 1 cut(s) 633
RsaI GTAC 4 cut(s) 189, 885, 974, 1158
RsaNI GTAC 4 cut(s) 188, 884, 973, 1157
RseI CAYNNNNRTG 1 cut(s) 1141
SacI GAGCTC 1 cut(s) 1204
SatI GCNGC 3 cut(s) 634, 1074, 1315
Sau3AI GATC 8 cut(s) 27, 592, 645, 870, 942, 1120, 1260, 1389
Sau96I GGNCC 1 cut(s) 652
SchI GAGTC 6 cut(s) 299, 338, 543, 838, 1310, 1364
ScrFI CCNGG 4 cut(s) 109, 483, 657, 1020
SduI GDGCHC 3 cut(s) 65, 1204, 1269
SfaNI GCATC 3 cut(s) 91, 435, 1072
SfcI CTRYAG 1 cut(s) 634
SinI GGWCC 1 cut(s) 652
SmiMI CAYNNNNRTG 1 cut(s) 1141
SmlI CTYRAG 1 cut(s) 968
SmoI CTYRAG 1 cut(s) 968
SnaBI TACGTA 1 cut(s) 1160
Sse9I AATT 5 cut(s) 438, 1191, 1208, 1374, 1397
SsiI CCGC 5 cut(s) 260, 585, 597, 685, 1073
SspMI CTAG 3 cut(s) 848, 1052, 1343
SstI GAGCTC 1 cut(s) 1204
StyD4I CCNGG 4 cut(s) 107, 481, 655, 1018
TaaI ACNGT 7 cut(s) 67, 322, 604, 716, 893, 1010, 1218
TaiI ACGT 3 cut(s) 426, 1162, 1409
TaqI TCGA 3 cut(s) 33, 99, 348
TasI AATT 5 cut(s) 438, 1191, 1208, 1374, 1397
TatI WGTACW 2 cut(s) 883, 972
TauI GCSGC 1 cut(s) 1076
TfiI GAWTC 7 cut(s) 131, 167, 365, 492, 814, 961, 1098
TscAI CASTG 2 cut(s) 388, 898
TseFI GTSAC 4 cut(s) 41, 469, 535, 841
TseI GCWGC 2 cut(s) 633, 1314
Tsp45I GTSAC 4 cut(s) 41, 469, 535, 841
TspDTI ATGAA 4 cut(s) 541, 569, 844, 939
TspRI CASTG 2 cut(s) 388, 898
VneI GTGCAC 1 cut(s) 1265
VpaK11BI GGWCC 1 cut(s) 652
XapI RAATTY 2 cut(s) 438, 1397
XceI RCATGY 2 cut(s) 521, 725
XmiI GTMKAC 1 cut(s) 332
XmnI GAANNNNTTC 2 cut(s) 438, 930
XspI CTAG 3 cut(s) 848, 1052, 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.