Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003791

Physical Location & Seq

Genomic Coordinates Reverse (-)

5116523 .. 5123559

Gene Structure 7037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4395 bp

ATGTCACAAGACGATGAGATTGTGATGCGTGATGTGACGAGCGCGGGAATTTGTATTGGTGACCGCATTGGCCGAGAAGCCGCATCGCAGCTCGATCTAGAAGAAGCTCTTGAAGCTTCTAGATACGCTAGTCATCCATATTCTACTCATCCCAGAGAGTGGCCGCCGTTGATTGAGGTTGGTGAGACTTGGGAATTGCCTTCTGTACTCATTGAGAGGTATAATACAGCCGGCGGGGAAGGGACGGCCTTATGTGGAATCTTTCCAGAGATTCGACGGGCTTGGGCATCCGTCGATAATTCTTTGTTTCTGTGGCGTTTTGACAAAAGGGATGGGCAGTGTCCTGAGTATAGTGGGGAGGAACAGGCAATTTGTGCGGTTGGTCTAGCGAAATGTAGACCTGGAGTTTTTGTTGAAGCTATTCAATATCTTCTGGTGCTGGCAACTCCTGTTGAGTTGGTTCTTGTTGGAGTGTGCTGCACTGAAGGACCTGATGGTAGAGATCCTTATGCTGAAATTTCAGTACAACCTCTGCCCGACTATACAATATCATCAGATGGAGTGACAATGACATGCGTTACATGTACCAATAAAGGGCGTATTTTCATGGCTGGACGTGATGGTCACATATATGAGCTGCTATATACAACTGGCTCTGGCTGGAATAAACGTTGTCGTAAAGTGTGCCTTACTGCAGGCGTAGGTAGTATGATCTCAAGGTGGGTTGTTCCAAATGTATTCAAGTTTGGTGCTGTAGATCCTGTTGTAGAGATGGTTGTTGATAATGAAAGGCAAATTTTATATGCCCGCACTGAAGAGATGAAACTTCAAGCATATGTTTCTGGGCCAAATGGGGAAGGTCCTCTTAAGAAGGTGGCAGAAGAAAGGAATCTATTAAATCAGAAGGATTTGAGCCAAGGAAATCGTCAGTCAGCAGTGGCAGGTCGATCTAACAAGCCATCCATAGTCAGTATTTCACCATTGTCCATGTTGGAATCAAAATGGTTGCACCTTGTTGCAGCATTATCAGATGGCAGGAGGATGTATCTTTCCACCTCCTCAAGTGGAAGTGGTAGTACTATTAGCTTCAGTGGTTTCAACAACCACCGCCAGACTCCAAACTGTCTGAAAGTGGTTTCAACCAGGCCATCTCCTCCATTGGGTGTTGGTGTTGGACTGGGTTTTGGGGCCGCATCTGTAGCCGGTAGAACTCAGAACGACGACCTATCTATGAAGATTGAAACAGCATACTATTCTGTTGGAACTCTTGTCCTTTCAGATTCATCGCCACCTGCTATGTCTTCTCTTCTTGTTGTTAGCAGAGATTCAAGCGTGCACTCTCAGGCTGGCAGCAGTTCAGGGCCAAGTTCAAGGAGTTCTCGGGCTTTACGAGAAGTTGTGTCTTCCCTTCCTATTGAAGGCCGTATGCTTTTTGTAGCAGATGTGCTCCCCTCTCCTGATACTGCTGCTACTATTCAATCATTATATTCAGAACTAGAATACTGTGGTGTCGAAGTCTCCGGAGAATCTTATGAAAAGGCATGTGGAAAACTCTGGGCGAGAAGTGATCTTTCAACCCAGCATATTTTGCCAAGGAGAAAGATTGTTGTTTTTACCACCATGGGTATGATGGAACTTGTTTTCAATAGGCCTGTTGATATCTTGAGAAGACTTCTGGAATCCAACTCTCCAAGGTCCCTTCTAGAAGATTTTTTCACCCGCTTTGGAGTAGGCGAAGCAGCTGCCATGTGCTTGATGTTAGCTGCCCGGATAATAAATTTTGAAGATTTAATTAGTAACATTGTTGCCGATAAAGCAGCTGAGGCTTTTGAGGATCCGAGAATTGTAGGAATGCCACAATTTGATGGCAGTAGTGGATTGTCAAATACTAGAACAGCAACTGGAGGTTTCAGCATGGGCCAAGTTGTTCAAGAAGCCGAGCCCATTTTCTCAGGTGCTCACGAAGGGCTCTGCCTTTGCACATCAAGGTTACTGTTTCCCCTATGGGAACTTCCCGTGATGTCAAAAAAAACTAGTTCTGACACCATGTCTGAGGACGGAGTTGTGATTTGTCGTCTTTCTACCAGTGCTATGCATGTGCTGGAAAGCAAGATTCGATCGTTGGAGAAATTCTTAAGATCTAGAAGGAACCAGAGAAGGGGGCTTTATGGATGTGTTGCTGGGTTAGGAGATGTAACTGGCTCTATTTTGTATGGTACTGGTTCAGAGTTGGGAGCTACTGAGAGGAATATGGTTAGGAACTTGTTTGGAGCATATTCCAACGGAGGCGAGTCAGCAAATAAAAGACAGCGATTGCCATATAGTCCTGCTGAATTGGCTGCCACAGAGGTGAGGGCTATGGAGTGTATTAGGCAGTTACTTCTCAGATCTGCAGAAGCCCTTTTCCTACTACAACTTCTTTCTCAACATCATGTTGCTAGATTAGTTCAGGAGCTTGATGCAAATCTAAAGCAAGCTTTAGTTCAGTTGACATTCCATCAGCTAGTTTGTTCTGAAGAGGGTGACCAAATTGCAACAAGGCTCATATCTGCCGTGATGGAGTATTATACTGGCTCAGATGGCAGGGGAACAGTTGACGATATTAGCCCGCGACTACGTGAAGGTTGCCCAAGTTACTTCAAGGAGTCTGATTACAAATTCTACTTAGCTGTTGAACGCCTTGAGAGAGCTGCTTTAACCTCAGATGCTGAAGAGAAGGAGAATGTTGCTAGAGAGGCGTTCAGTTTCTTGAGTAAGGTCCCTGGATCTGCAGATCTCCAAACTGTCTGCAAACGTTTTGAGGATTTGAGGTTCTATGAAGCTGTTGTCTGCTTGCCTTTGCAGAAGGCCCAAGCTCTTGATCCTGCTGGTGATGCTTTTAATGACCAACTTGATGCTTCCATAAGAGAGCATGCTCTTGCTCAGCGGAAACAATGCTATGAGATTATTGCCAACGCCTTGCGATCTCTAGCTAGTCCTCTAGCTAGTCCCACGCTAGACGAGGCTTCACGTAGTCAATATATATGCCAGATCGTTCATCTTGGTGTGCAATCAACTGACAGAGCGTTCCGAGAGTACCTATACAAGGCCATGATTGAACTGCATCTTGAAAACGAGCTCCTGGAGTACGGTGGTCCGGATTTGGTACCTTTTCTCCAGAATGCTGGCAGTCACTCTGAATCACAGGTCGGGGCTGTATCTACTGGATCATCTCCGCTGGGTCACTCAGGAACACAGATTTCATCAGATCAAGCAAAATATTTTGATCTTCTTGCAAAATACTATGTGTCAAAGAGACAACATGTGCTTGCTGCTCACGTGTTTCTAAGGCTTGCAGAGAGACGTGCTATTAGTTTAGGGGACAGTCCTACCCTTGAACGAAGGCGAGACGACCTAAGTCAAGCAGTTTTACAGGCCAAGAATGCGAGTAATAGCGATGGTTTAGTAGGTTCTGCTCAAGGTGTTTCTGACAGTGGATTGCTTGATCTGCTTGAAGGAAAACTCGCAGTTCTTCAGTTCCAAATTAAGATCAGGGACAAACTTGAAGCTATAGCTTCCAATTTTGAGTCCTCGGTTGCCATGCAGGACTCTGACCAGAACGGGCAAGTACTGGATGGTGATTCTAGTGATGATACCAACTTAGCAAATGCAGCAAATGAAATGGCCATGGAGGTCTCCTCGGAACTTAAAAGTGTAACACAGTTGTATAATGAGTATGCTGTCCCATTTGAGCTCTGGGAGATCTGTCTGGAAATGCTTTACTTTGCCAACTATTCTGGTGATGCTGATTCAAGTATAATAAGGGAAACATGGGCTAGACTCATTGACCAAGCTCTTTCACAAGGCGGAATACGTGAGGCCTGTGCAGTTCTTAAGAGAGTCGGATCTCATATATACCCTGGCGATGGAGTTGTTTTACCGCTGGATGTTTTATGCCTTCACCTTGAGAGAGCTGCACTTGAGAGATCAGAAAGGATTGAAAATGTTAGGGATGAAGACATAGCTAAAGCTCTTCTAGCCGCTTGCAAAGGCGCAGCTGAACCTGTGCTCAACGCTTATGACCGATTATTATCCAATGCAGCTGTTGTGCCATCCCCAAATCTAAGAATCCGCCTCCTTCGTTCAGTTCTAGTGGTACTCCGTGAATGGGCAATGTCTGTATTGTCAGACAGAATGGGGTCGAGTCCAACCAGGTCTTCTCTGATACTAGGCGGCTCGTTTGCGCTAGAGAACAAAGCTGCTCTTAACCAAGGGGCACGTGATAAGATTGCAAACGCTGCAAACAGGTATATGACAGAGGTTAGGAGACTAGCTCTGCCACCGAACAAGACGGATGGTGTATACGCAGGTTTTAAAGAACTTGACGAGTCTCTCTTAAGTCCATTCTCCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000972 GO:0003674 GO:0005198 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0005737 GO:0005886 GO:0005911 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006998 GO:0008104 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010256 GO:0010467 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0017038 GO:0017056 GO:0030054 GO:0031090 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036228 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044611 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051236 GO:0051276 GO:0051641 GO:0051649 GO:0051704 GO:0055044 GO:0061024 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0072594 GO:0072657 GO:0090435

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nucleoporin_C Nucleoporin_N

Protein Analysis

1464

Amino Acids

160.01

Weight (kDa)

5.33

Isoelectric Point (pI)

50.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleoporin_N	PF08801	54 - 544	1.3e-82	Nup133 N terminal like
Nucleoporin_C	PF03177	651 - 1385	1.4e-68	Non-repetitive/WGA-negative nucleoporin C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14850
fragaria_vesca	FvH4_4g33560 FvH4_4g33560 FvH4_4g33560
malus_domestica	MD13G1020400.v1.1 MD16G1018600.v1.1 MD16G1018800.v1.1
prunus_persica	Prupe.1G333300_v2.0.a1
pyrus_communis	pycom13g01720 pycom16g01690
rosa_chinensis	RchiOBHm_Chr2g0167011 RchiOBHm_Chr2g0167021 RchiOBHm_Chr4g0443061
rosa_laevigata	RLG00000005957 RLG00000021689
rosa_multiflora	Rmu_co7980658.1_g000001 Rmu_sc0007968.1_g000017 Rmu_sc0008069.1_g000005 Rmu_sc0010966.1_g000010 Rmu_sc0039405.1_g000001 Rmu_sc0039405.1_g000002
rosa_roxburghii	Rroxscaffold_2G00083800 Rroxscaffold_5G00383690
rosa_rugosa	Rorug04G0344100
rosa_samantha	Rh2AG594500 Rh2AG594600 Rh2BG605800 Rh2BG605900 Rh2CG576700 Rh2DG617400 Rh4BG409900 Rh4DG404800
rosa_wichuraiana	Rw2G049490 Rw4G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1300
AasI	GACNNNNNNGTC	1 cut(s)	621
Acc36I	ACCTGC	3 cut(s)	932, 1300, 4337
Acc65I	GGTACC	1 cut(s)	3145
AccB1I	GGYRCC	1 cut(s)	3145
AccB7I	CCANNNNNTGG	1 cut(s)	159
AccI	GTMKAC	2 cut(s)	397, 4341
AccII	CGCG	2 cut(s)	44, 2611
AccIII	TCCGGA	2 cut(s)	1520, 3136
AclI	AACGTT	2 cut(s)	670, 2794
AclWI	GGATC	8 cut(s)	497, 752, 1829, 1842, 2773, 2855, 3214, 3892
AcoI	YGGCCR	3 cut(s)	70, 161, 3663
AcsI	RAATTY	6 cut(s)	48, 516, 795, 1777, 2129, 2657
AcuI	CTGAAG	6 cut(s)	504, 834, 1072, 2535, 2730, 3497
AcvI	CACGTG	2 cut(s)	3319, 4259
AfiI	CCNNNNNNNGG	8 cut(s)	159, 594, 1160, 1418, 2158, 3085, 3905, 4147
AflII	CTTAAG	4 cut(s)	866, 2134, 3872, 4375
AflIII	ACRYGT	3 cut(s)	581, 3301, 3318
AhdI	GACNNNNNGTC	1 cut(s)	2047
AhlI	ACTAGT	1 cut(s)	2033
AjiI	CACGTC	2 cut(s)	617, 3344
AjnI	CCWGG	6 cut(s)	400, 1142, 2761, 3120, 3898, 4190
AjuI	GAANNNNNNNTTGG	2 cut(s)	4180, 4212
AleI	CACNNNNGTG	1 cut(s)	2348
AloI	GAACNNNNNNTCC	2 cut(s)	2795, 2827
Alw21I	GWGCWC	6 cut(s)	1338, 1449, 1960, 3120, 3735, 4050
Alw26I	GTCTC	8 cut(s)	179, 1522, 3289, 3334, 3381, 3679, 4300, 4374
Alw44I	GTGCAC	1 cut(s)	1334
AlwI	GGATC	8 cut(s)	497, 752, 1829, 1842, 2773, 2855, 3214, 3892
AlwNI	CAGNNNCTG	2 cut(s)	1901, 2708
Ama87I	CYCGRG	1 cut(s)	1380
Aor13HI	TCCGGA	2 cut(s)	1520, 3136
ApaLI	GTGCAC	1 cut(s)	1334
ApoI	RAATTY	6 cut(s)	48, 516, 795, 1777, 2129, 2657
Asp700I	GAANNNNTTC	1 cut(s)	420
Asp718I	GGTACC	1 cut(s)	3145
AspLEI	GCGC	3 cut(s)	44, 4034, 4225
AsuC2I	CCSGG	1 cut(s)	1768
AvaI	CYCGRG	1 cut(s)	1380
AvaII	GGWCC	5 cut(s)	488, 860, 1695, 2758, 3134
BaeGI	GKGCMC	2 cut(s)	1338, 4258
BaeI	ACNNNNGTAYC	2 cut(s)	115, 148
BalI	TGGCCA	1 cut(s)	3665
BamHI	GGATCC	1 cut(s)	1834
BanI	GGYRCC	1 cut(s)	3145
BanII	GRGCYC	4 cut(s)	1944, 1971, 3120, 3735
BarI	GAAGNNNNNNTAC	2 cut(s)	1060, 1092
BbrPI	CACGTG	2 cut(s)	3319, 4259
BbsI	GAAGAC	5 cut(s)	1293, 1395, 1675, 4002, 4188
Bbv12I	GWGCWC	6 cut(s)	1338, 1449, 1960, 3120, 3735, 4050
BbvCI	CCTCAGC	1 cut(s)	1821
BceAI	ACGGC	4 cut(s)	151, 261, 1407, 2537
BcgI	CGANNNNNNTGC	2 cut(s)	1724, 1758
BciT130I	CCWGG	6 cut(s)	402, 1144, 2763, 3122, 3900, 4192
BcnI	CCSGG	1 cut(s)	1768
BcoDI	GTCTC	8 cut(s)	179, 1522, 3289, 3334, 3381, 3679, 4300, 4374
BcuI	ACTAGT	1 cut(s)	2033
BfmI	CTRYAG	6 cut(s)	693, 753, 1197, 2391, 2769, 3549
BfrI	CTTAAG	4 cut(s)	866, 2134, 3872, 4375
BfuAI	ACCTGC	3 cut(s)	932, 1300, 4337
BglII	AGATCT	4 cut(s)	2138, 2387, 2773, 3741
BlpI	GCTNAGC	1 cut(s)	2922
BmcAI	AGTACT	2 cut(s)	1078, 3609
Bme1390I	CCNGG	7 cut(s)	402, 1144, 1768, 2763, 3122, 3900, 4192
Bme18I	GGWCC	5 cut(s)	488, 860, 1695, 2758, 3134
BmeRI	GACNNNNNGTC	1 cut(s)	2047
BmeT110I	CYCGRG	1 cut(s)	1380
BmgBI	CACGTC	2 cut(s)	617, 3344
BmiI	GGNNCC	6 cut(s)	1189, 1697, 1836, 2150, 2760, 3147
BmrFI	CCNGG	7 cut(s)	402, 1144, 1768, 2763, 3122, 3900, 4192
BmrI	ACTGGG	1 cut(s)	1187
BmuI	ACTGGG	1 cut(s)	1187
BoxI	GACNNNNGTC	1 cut(s)	3396
BpiI	GAAGAC	5 cut(s)	1293, 1395, 1675, 4002, 4188
BplI	GAGNNNNNCTC	4 cut(s)	3662, 3694, 4297, 4329
BpmI	CTGGAG	4 cut(s)	423, 1923, 3140, 3143
Bpu10I	CCTNAGC	1 cut(s)	1821
Bpu1102I	GCTNAGC	1 cut(s)	2922
BpuEI	CTTGAG	8 cut(s)	700, 1045, 1684, 2702, 2770, 3441, 3965, 3980
BpuMI	CCSGG	1 cut(s)	1768
BsaAI	YACGTR	5 cut(s)	2618, 3011, 3319, 3854, 4259
BsaBI	GATNNNNATC	2 cut(s)	2463, 4069
BsaI	GGTCTC	1 cut(s)	3679
BsaWI	WCCGGW	2 cut(s)	1520, 3136
BsaXI	ACNNNNNCTCC	4 cut(s)	396, 426, 3138, 3168
Bsc4I	CCNNNNNNNGG	8 cut(s)	159, 594, 1160, 1418, 2158, 3085, 3905, 4147
Bse118I	RCCGGY	2 cut(s)	230, 1202
Bse1I	ACTGG	9 cut(s)	655, 1182, 1906, 2085, 2203, 2224, 2575, 3208, 3615
Bse3DI	GCAATG	1 cut(s)	4158
Bse8I	GATNNNNATC	2 cut(s)	2463, 4069
BseAI	TCCGGA	2 cut(s)	1520, 3136
BseBI	CCWGG	6 cut(s)	402, 1144, 2763, 3122, 3900, 4192
BseJI	GATNNNNATC	2 cut(s)	2463, 4069
BseLI	CCNNNNNNNGG	8 cut(s)	159, 594, 1160, 1418, 2158, 3085, 3905, 4147
BseMI	GCAATG	1 cut(s)	4158
BseNI	ACTGG	9 cut(s)	655, 1182, 1906, 2085, 2203, 2224, 2575, 3208, 3615
BseRI	GAGGAG	3 cut(s)	1048, 1143, 3667
BseSI	GKGCMC	2 cut(s)	1338, 4258
BseYI	CCCAGC	3 cut(s)	1578, 2180, 3217
BsgI	GTGCAG	3 cut(s)	463, 3885, 3939
Bsh1236I	CGCG	2 cut(s)	44, 2611
Bsh1285I	CGRYCG	1 cut(s)	2120
BshNI	GGYRCC	1 cut(s)	3145
BsiEI	CGRYCG	1 cut(s)	2120
BsiHKAI	GWGCWC	6 cut(s)	1338, 1449, 1960, 3120, 3735, 4050
BsiHKCI	CYCGRG	1 cut(s)	1380
BsiSI	CCGG	5 cut(s)	231, 1203, 1521, 1768, 3137
BslFI	GGGAC	7 cut(s)	256, 1681, 2744, 2973, 3374, 3548, 3707
BslI	CCNNNNNNNGG	8 cut(s)	159, 594, 1160, 1418, 2158, 3085, 3905, 4147
BsmAI	GTCTC	8 cut(s)	179, 1522, 3289, 3334, 3381, 3679, 4300, 4374
BsmBI	CGTCTC	2 cut(s)	3334, 3381
BsmFI	GGGAC	7 cut(s)	256, 1681, 2744, 2973, 3374, 3548, 3707
BsmI	GAATGC	3 cut(s)	1857, 3166, 3427
Bso31I	GGTCTC	1 cut(s)	3679
BsoBI	CYCGRG	1 cut(s)	1380
Bsp1286I	GDGCHC	9 cut(s)	1338, 1449, 1944, 1960, 1971, 3120, 3735, 4050, 4258
Bsp13I	TCCGGA	2 cut(s)	1520, 3136
Bsp1720I	GCTNAGC	1 cut(s)	2922
Bsp19I	CCATGG	2 cut(s)	1620, 3666
BspEI	TCCGGA	2 cut(s)	1520, 3136
BspFNI	CGCG	2 cut(s)	44, 2611
BspLI	GGNNCC	6 cut(s)	1189, 1697, 1836, 2150, 2760, 3147
BspMAI	CTGCAG	3 cut(s)	697, 2395, 2773
BspMI	ACCTGC	3 cut(s)	932, 1300, 4337
BspPI	GGATC	8 cut(s)	497, 752, 1829, 1842, 2773, 2855, 3214, 3892
BspQI	GCTCTTC	1 cut(s)	4017
BspT107I	GGYRCC	1 cut(s)	3145
BspTI	CTTAAG	4 cut(s)	866, 2134, 3872, 4375
BspTNI	GGTCTC	1 cut(s)	3679
BsrDI	GCAATG	1 cut(s)	4158
BsrFI	RCCGGY	2 cut(s)	230, 1202
BsrI	ACTGG	9 cut(s)	655, 1182, 1906, 2085, 2203, 2224, 2575, 3208, 3615
BssAI	RCCGGY	2 cut(s)	230, 1202
BssNAI	GTATAC	1 cut(s)	4342
BssT1I	CCWWGG	6 cut(s)	916, 1592, 1620, 1691, 3666, 4249
Bst1107I	GTATAC	1 cut(s)	4342
Bst2UI	CCWGG	6 cut(s)	402, 1144, 2763, 3122, 3900, 4192
Bst4CI	ACNGT	9 cut(s)	1124, 1505, 1995, 2593, 2785, 3131, 3365, 3473, 3702
Bst6I	CTCTTC	5 cut(s)	810, 1311, 2511, 2706, 4017
BstAFI	CTTAAG	4 cut(s)	866, 2134, 3872, 4375
BstAPI	GCANNNNNTGC	3 cut(s)	374, 1588, 4277
BstBAI	YACGTR	5 cut(s)	2618, 3011, 3319, 3854, 4259
BstDSI	CCRYGG	2 cut(s)	1620, 3666
BstEII	GGTNACC	2 cut(s)	59, 2522
BstENI	CCTNNNNNAGG	2 cut(s)	1416, 3083
BstFNI	CGCG	2 cut(s)	44, 2611
BstHHI	GCGC	3 cut(s)	44, 4034, 4225
BstMAI	GTCTC	8 cut(s)	179, 1522, 3289, 3334, 3381, 3679, 4300, 4374
BstMCI	CGRYCG	1 cut(s)	2120
BstNI	CCWGG	6 cut(s)	402, 1144, 2763, 3122, 3900, 4192
BstNSI	RCATGY	6 cut(s)	576, 585, 1545, 2099, 2915, 3305
BstPAI	GACNNNNGTC	1 cut(s)	3396
BstPI	GGTNACC	2 cut(s)	59, 2522
BstSCI	CCNGG	7 cut(s)	400, 1142, 1766, 2761, 3120, 3898, 4190
BstSFI	CTRYAG	6 cut(s)	693, 753, 1197, 2391, 2769, 3549
BstSLI	GKGCMC	2 cut(s)	1338, 4258
BstUI	CGCG	2 cut(s)	44, 2611
BstV2I	GAAGAC	5 cut(s)	1293, 1395, 1675, 4002, 4188
BstX2I	RGATCY	9 cut(s)	502, 757, 1834, 2138, 2387, 2765, 2773, 3741, 3884
BstXI	CCANNNNNNTGG	1 cut(s)	3164
BstYI	RGATCY	9 cut(s)	502, 757, 1834, 2138, 2387, 2765, 2773, 3741, 3884
BstZ17I	GTATAC	1 cut(s)	4342
BtgI	CCRYGG	2 cut(s)	1620, 3666
BtgZI	GCGATG	4 cut(s)	69, 1269, 3450, 3918
BtrI	CACGTC	2 cut(s)	617, 3344
BtsI	GCAGTG	2 cut(s)	344, 942
BtsIMutI	CAGTG	7 cut(s)	344, 480, 810, 942, 1096, 2092, 3478
BveI	ACCTGC	3 cut(s)	932, 1300, 4337
CaiI	CAGNNNCTG	2 cut(s)	1901, 2708
CfoI	GCGC	3 cut(s)	44, 4034, 4225
Cfr10I	RCCGGY	2 cut(s)	230, 1202
CsiI	ACCWGGT	1 cut(s)	4190
DraI	TTTAAA	1 cut(s)	4354
DrdI	GACNNNNNNGTC	1 cut(s)	621
DriI	GACNNNNNGTC	1 cut(s)	2047
DseDI	GACNNNNNNGTC	1 cut(s)	621
EaeI	YGGCCR	3 cut(s)	70, 161, 3663
Eam1104I	CTCTTC	5 cut(s)	810, 1311, 2511, 2706, 4017
Eam1105I	GACNNNNNGTC	1 cut(s)	2047
EarI	CTCTTC	5 cut(s)	810, 1311, 2511, 2706, 4017
EciI	GGCGGA	2 cut(s)	3861, 4100
Ecl136II	GAGCTC	2 cut(s)	3118, 3733
Eco130I	CCWWGG	6 cut(s)	916, 1592, 1620, 1691, 3666, 4249
Eco147I	AGGCCT	2 cut(s)	1651, 3860
Eco24I	GRGCYC	4 cut(s)	1944, 1971, 3120, 3735
Eco31I	GGTCTC	1 cut(s)	3679
Eco32I	GATATC	1 cut(s)	1660
Eco47I	GGWCC	5 cut(s)	488, 860, 1695, 2758, 3134
Eco53kI	GAGCTC	2 cut(s)	3118, 3733
Eco57I	CTGAAG	6 cut(s)	504, 834, 1072, 2535, 2730, 3497
Eco72I	CACGTG	2 cut(s)	3319, 4259
Eco88I	CYCGRG	1 cut(s)	1380
Eco91I	GGTNACC	2 cut(s)	59, 2522
EcoICRI	GAGCTC	2 cut(s)	3118, 3733
EcoNI	CCTNNNNNAGG	2 cut(s)	1416, 3083
EcoO109I	RGGNCCY	4 cut(s)	488, 860, 1695, 2758
EcoO65I	GGTNACC	2 cut(s)	59, 2522
EcoRII	CCWGG	6 cut(s)	400, 1142, 2761, 3120, 3898, 4190
EcoRV	GATATC	1 cut(s)	1660
EcoT14I	CCWWGG	6 cut(s)	916, 1592, 1620, 1691, 3666, 4249
EcoT22I	ATGCAT	1 cut(s)	2097
EcoT38I	GRGCYC	4 cut(s)	1944, 1971, 3120, 3735
ErhI	CCWWGG	6 cut(s)	916, 1592, 1620, 1691, 3666, 4249
Esp3I	CGTCTC	2 cut(s)	3334, 3381
FalI	AAGNNNNNCTT	8 cut(s)	93, 125, 672, 704, 849, 881, 4227, 4259
FaqI	GGGAC	7 cut(s)	256, 1681, 2744, 2973, 3374, 3548, 3707
FauI	CCCGC	5 cut(s)	37, 227, 815, 1727, 2616
FauNDI	CATATG	1 cut(s)	835
FblI	GTMKAC	2 cut(s)	397, 4341
FriOI	GRGCYC	4 cut(s)	1944, 1971, 3120, 3735
GlaI	GCGC	3 cut(s)	43, 4033, 4224
GsaI	CCCAGC	3 cut(s)	1582, 2184, 3221
GsuI	CTGGAG	4 cut(s)	423, 1923, 3140, 3143
HapII	CCGG	5 cut(s)	231, 1203, 1521, 1768, 3137
HhaI	GCGC	3 cut(s)	44, 4034, 4225
Hin6I	GCGC	3 cut(s)	42, 4032, 4223
HinP1I	GCGC	3 cut(s)	42, 4032, 4223
HincII	GTYRAC	2 cut(s)	2490, 2596
HindII	GTYRAC	2 cut(s)	2490, 2596
HindIII	AAGCTT	2 cut(s)	114, 2475
HpaII	CCGG	5 cut(s)	231, 1203, 1521, 1768, 3137
Hpy166II	GTNNAC	5 cut(s)	398, 1336, 2490, 2596, 4342
Hpy8I	GTNNAC	5 cut(s)	398, 1336, 2490, 2596, 4342
Hpy99I	CGWCG	3 cut(s)	279, 296, 1223
HpyCH4III	ACNGT	9 cut(s)	1124, 1505, 1995, 2593, 2785, 3131, 3365, 3473, 3702
HpyCH4IV	ACGT	9 cut(s)	616, 670, 2617, 2794, 3010, 3318, 3343, 3853, 4258
HpySE526I	ACGT	9 cut(s)	616, 670, 2617, 2794, 3010, 3318, 3343, 3853, 4258
HspAI	GCGC	3 cut(s)	42, 4032, 4223
Kpn2I	TCCGGA	2 cut(s)	1520, 3136
KpnI	GGTACC	1 cut(s)	3149
KroI	GCCGGC	1 cut(s)	230
KroNI	GCCGGC	1 cut(s)	232
LguI	GCTCTTC	1 cut(s)	4017
LmnI	GCTCC	5 cut(s)	1452, 2234, 2270, 2452, 3123
MabI	ACCWGGT	1 cut(s)	4190
MaeII	ACGT	9 cut(s)	616, 670, 2617, 2794, 3010, 3318, 3343, 3853, 4258
MflI	RGATCY	9 cut(s)	502, 757, 1834, 2138, 2387, 2765, 2773, 3741, 3884
MhlI	GDGCHC	9 cut(s)	1338, 1449, 1944, 1960, 1971, 3120, 3735, 4050, 4258
MlsI	TGGCCA	1 cut(s)	3665
MluNI	TGGCCA	1 cut(s)	3665
MlyI	GAGTC	9 cut(s)	1108, 2300, 2654, 3575, 3581, 3813, 3888, 4192, 4376
MmeI	TCCRAC	9 cut(s)	448, 972, 1153, 1240, 1707, 2103, 2304, 3862, 4211
Mox20I	TGGCCA	1 cut(s)	3665
Mph1103I	ATGCAT	1 cut(s)	2097
MroI	TCCGGA	2 cut(s)	1520, 3136
MroNI	GCCGGC	1 cut(s)	230
MroXI	GAANNNNTTC	1 cut(s)	420
MscI	TGGCCA	1 cut(s)	3665
MslI	CAYNNNNRTG	4 cut(s)	630, 1625, 2348, 3042
Msp20I	TGGCCA	1 cut(s)	3665
MspA1I	CMGCKG	7 cut(s)	1742, 1820, 2926, 3217, 3922, 4037, 4082
MspCI	CTTAAG	4 cut(s)	866, 2134, 3872, 4375
MspI	CCGG	5 cut(s)	231, 1203, 1521, 1768, 3137
MspR9I	CCNGG	7 cut(s)	402, 1144, 1768, 2763, 3122, 3900, 4192
Mva1269I	GAATGC	3 cut(s)	1857, 3166, 3427
MvaI	CCWGG	6 cut(s)	402, 1144, 2763, 3122, 3900, 4192
MvnI	CGCG	2 cut(s)	44, 2611
NaeI	GCCGGC	1 cut(s)	232
NciI	CCSGG	1 cut(s)	1768
NcoI	CCATGG	2 cut(s)	1620, 3666
NdeI	CATATG	1 cut(s)	835
NgoMIV	GCCGGC	1 cut(s)	230
NlaIV	GGNNCC	6 cut(s)	1189, 1697, 1836, 2150, 2760, 3147
NmeAIII	GCCGAG	2 cut(s)	98, 1963
NmuCI	GTSAC	8 cut(s)	3, 34, 59, 562, 623, 2522, 3170, 3221
NsiI	ATGCAT	1 cut(s)	2097
NspI	RCATGY	6 cut(s)	576, 585, 1545, 2099, 2915, 3305
OliI	CACNNNNGTG	1 cut(s)	2348
PaeI	GCATGC	1 cut(s)	2915
PaqCI	CACCTGC	1 cut(s)	1300
PceI	AGGCCT	2 cut(s)	1651, 3860
PciI	ACATGT	2 cut(s)	581, 3301
PciSI	GCTCTTC	1 cut(s)	4017
PcsI	WCGNNNNNNNCGW	1 cut(s)	1387
PctI	GAATGC	3 cut(s)	1857, 3166, 3427
PdiI	GCCGGC	1 cut(s)	232
PdmI	GAANNNNTTC	1 cut(s)	420
PflMI	CCANNNNNTGG	1 cut(s)	159
PfoI	TCCNGGA	1 cut(s)	3120
Ple19I	CGATCG	1 cut(s)	2120
PleI	GAGTC	9 cut(s)	1108, 2299, 2653, 3574, 3581, 3813, 3887, 4191, 4375
PmaCI	CACGTG	2 cut(s)	3319, 4259
PmlI	CACGTG	2 cut(s)	3319, 4259
PpsI	GAGTC	9 cut(s)	1108, 2299, 2653, 3574, 3581, 3813, 3887, 4191, 4375
Ppu21I	YACGTR	5 cut(s)	2618, 3011, 3319, 3854, 4259
PpuMI	RGGWCCY	4 cut(s)	488, 860, 1695, 2758
PscI	ACATGT	2 cut(s)	581, 3301
PshAI	GACNNNNGTC	1 cut(s)	3396
Psp124BI	GAGCTC	2 cut(s)	3120, 3735
Psp1406I	AACGTT	2 cut(s)	670, 2794
Psp5II	RGGWCCY	4 cut(s)	488, 860, 1695, 2758
Psp6I	CCWGG	6 cut(s)	400, 1142, 2761, 3120, 3898, 4190
PspCI	CACGTG	2 cut(s)	3319, 4259
PspEI	GGTNACC	2 cut(s)	59, 2522
PspFI	CCCAGC	3 cut(s)	1578, 2180, 3217
PspGI	CCWGG	6 cut(s)	400, 1142, 2761, 3120, 3898, 4190
PspN4I	GGNNCC	6 cut(s)	1189, 1697, 1836, 2150, 2760, 3147
PspPPI	RGGWCCY	4 cut(s)	488, 860, 1695, 2758
PstI	CTGCAG	3 cut(s)	697, 2395, 2773
PstNI	CAGNNNCTG	2 cut(s)	1901, 2708
PsuI	RGATCY	9 cut(s)	502, 757, 1834, 2138, 2387, 2765, 2773, 3741, 3884
PvuI	CGATCG	1 cut(s)	2120
PvuII	CAGCTG	4 cut(s)	1742, 1820, 4037, 4082
RseI	CAYNNNNRTG	4 cut(s)	630, 1625, 2348, 3042
SacI	GAGCTC	2 cut(s)	3120, 3735
SapI	GCTCTTC	1 cut(s)	4017
ScaI	AGTACT	2 cut(s)	1078, 3609
SchI	GAGTC	9 cut(s)	1108, 2300, 2654, 3575, 3581, 3813, 3888, 4192, 4376
ScrFI	CCNGG	7 cut(s)	402, 1144, 1768, 2763, 3122, 3900, 4192
SduI	GDGCHC	9 cut(s)	1338, 1449, 1944, 1960, 1971, 3120, 3735, 4050, 4258
SexAI	ACCWGGT	1 cut(s)	4190
SfcI	CTRYAG	6 cut(s)	693, 753, 1197, 2391, 2769, 3549
SinI	GGWCC	5 cut(s)	488, 860, 1695, 2758, 3134
SmiMI	CAYNNNNRTG	4 cut(s)	630, 1625, 2348, 3042
SpeI	ACTAGT	1 cut(s)	2033
SphI	GCATGC	1 cut(s)	2915
SseBI	AGGCCT	2 cut(s)	1651, 3860
SspI	AATATT	1 cut(s)	3260
SstI	GAGCTC	2 cut(s)	3120, 3735
StuI	AGGCCT	2 cut(s)	1651, 3860
StyD4I	CCNGG	7 cut(s)	400, 1142, 1766, 2761, 3120, 3898, 4190
StyI	CCWWGG	6 cut(s)	916, 1592, 1620, 1691, 3666, 4249
TaaI	ACNGT	9 cut(s)	1124, 1505, 1995, 2593, 2785, 3131, 3365, 3473, 3702
TaiI	ACGT	9 cut(s)	619, 673, 2620, 2797, 3013, 3321, 3346, 3856, 4261
TaqI	TCGA	7 cut(s)	93, 274, 294, 946, 1512, 2116, 4181
TaqII	GACCGA	1 cut(s)	4077
TatI	WGTACW	4 cut(s)	205, 523, 1076, 3607
TauI	GCSGC	5 cut(s)	83, 166, 1193, 4022, 4215
TscAI	CASTG	7 cut(s)	344, 487, 817, 942, 1096, 2092, 3478
TseFI	GTSAC	8 cut(s)	3, 34, 59, 562, 623, 2522, 3170, 3221
Tsp45I	GTSAC	8 cut(s)	3, 34, 59, 562, 623, 2522, 3170, 3221
TspGWI	ACGGA	5 cut(s)	280, 2073, 2298, 4130, 4346
TspRI	CASTG	7 cut(s)	344, 487, 817, 942, 1096, 2092, 3478
Van91I	CCANNNNNTGG	1 cut(s)	159
Vha464I	CTTAAG	4 cut(s)	866, 2134, 3872, 4375
VneI	GTGCAC	1 cut(s)	1334
VpaK11BI	GGWCC	5 cut(s)	488, 860, 1695, 2758, 3134
XagI	CCTNNNNNAGG	2 cut(s)	1416, 3083
XapI	RAATTY	6 cut(s)	48, 516, 795, 1777, 2129, 2657
XbaI	TCTAGA	4 cut(s)	97, 119, 1702, 2141
XceI	RCATGY	6 cut(s)	576, 585, 1545, 2099, 2915, 3305
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1627, 3732
XmiI	GTMKAC	2 cut(s)	397, 4341
XmnI	GAANNNNTTC	1 cut(s)	420
ZrmI	AGTACT	2 cut(s)	1078, 3609
Zsp2I	ATGCAT	1 cut(s)	2097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.