Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14850 |
| fragaria_vesca | FvH4_4g33560 FvH4_4g33560 FvH4_4g33560 |
| malus_domestica | MD13G1020400.v1.1 MD16G1018600.v1.1 MD16G1018800.v1.1 |
| prunus_persica | Prupe.1G333300_v2.0.a1 |
| pyrus_communis | pycom13g01720 pycom16g01690 |
| rosa_chinensis | RchiOBHm_Chr2g0167011 RchiOBHm_Chr2g0167021 RchiOBHm_Chr4g0443061 |
| rosa_laevigata | RLG00000005957 RLG00000021689 |
| rosa_multiflora | Rmu_co7980658.1_g000001 Rmu_sc0007968.1_g000017 Rmu_sc0008069.1_g000005 Rmu_sc0010966.1_g000010 Rmu_sc0039405.1_g000001 Rmu_sc0039405.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083800 Rroxscaffold_5G00383690 |
| rosa_rugosa | Rorug04G0344100 |
| rosa_samantha | Rh2AG594500 Rh2AG594600 Rh2BG605800 Rh2BG605900 Rh2CG576700 Rh2DG617400 Rh4BG409900 Rh4DG404800 |
| rosa_wichuraiana | Rw2G049490 Rw4G034330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 619 |
| Acc36I | ACCTGC | 2 cut(s) | 619, 937 |
| AccB1I | GGYRCC | 1 cut(s) | 1597 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 386, 463 |
| AccII | CGCG | 1 cut(s) | 87 |
| AciI | CCGC | 4 cut(s) | 11, 85, 359, 591 |
| AcoI | YGGCCR | 1 cut(s) | 703 |
| AcsI | RAATTY | 1 cut(s) | 661 |
| AcuI | CTGAAG | 2 cut(s) | 462, 1136 |
| AfaI | GTAC | 6 cut(s) | 136, 725, 1065, 1083, 1443, 1529 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 110, 188, 386, 463, 1461 |
| AflIII | ACRYGT | 2 cut(s) | 166, 1390 |
| AgsI | TTSAA | 6 cut(s) | 337, 470, 1226, 1562, 1643, 1732 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 450, 482, 951, 983 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1663, 1695 |
| Alw21I | GWGCWC | 2 cut(s) | 539, 1423 |
| Alw26I | GTCTC | 3 cut(s) | 618, 735, 835 |
| Alw44I | GTGCAC | 1 cut(s) | 1419 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 386 |
| AoxI | GGCC | 4 cut(s) | 62, 113, 703, 1555 |
| ApaLI | GTGCAC | 1 cut(s) | 1419 |
| ApoI | RAATTY | 1 cut(s) | 661 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 679, 711 |
| AspS9I | GGNCC | 4 cut(s) | 113, 454, 1291, 1586 |
| AsuHPI | GGTGA | 3 cut(s) | 365, 1346, 1634 |
| AvaII | GGWCC | 3 cut(s) | 454, 1291, 1586 |
| BaeGI | GKGCMC | 1 cut(s) | 1423 |
| BanI | GGYRCC | 1 cut(s) | 1597 |
| BbsI | GAAGAC | 1 cut(s) | 1142 |
| Bbv12I | GWGCWC | 2 cut(s) | 539, 1423 |
| BbvCI | CCTCAGC | 2 cut(s) | 222, 1179 |
| BccI | CCATC | 3 cut(s) | 405, 752, 1180 |
| BceAI | ACGGC | 2 cut(s) | 690, 1521 |
| BclI | TGATCA | 1 cut(s) | 1045 |
| BcoDI | GTCTC | 3 cut(s) | 618, 735, 835 |
| BfaI | CTAG | 2 cut(s) | 60, 1136 |
| BfmI | CTRYAG | 5 cut(s) | 108, 204, 941, 1085, 1210 |
| BfuAI | ACCTGC | 2 cut(s) | 619, 937 |
| BlpI | GCTNAGC | 1 cut(s) | 495 |
| BmcAI | AGTACT | 2 cut(s) | 1083, 1529 |
| Bme18I | GGWCC | 3 cut(s) | 454, 1291, 1586 |
| BmgT120I | GGNCC | 4 cut(s) | 113, 454, 1291, 1586 |
| BmiI | GGNNCC | 2 cut(s) | 1453, 1599 |
| BmsI | GCATC | 7 cut(s) | 787, 922, 1165, 1327, 1348, 1366, 1506 |
| BpiI | GAAGAC | 1 cut(s) | 1142 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 133, 165, 853, 885 |
| Bpu10I | CCTNAGC | 3 cut(s) | 222, 921, 1179 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 495 |
| BpuEI | CTTGAG | 2 cut(s) | 638, 855 |
| BsaBI | GATNNNNATC | 2 cut(s) | 936, 1412 |
| BsaJI | CCNNGG | 3 cut(s) | 287, 813, 987 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 110, 188, 386, 463, 1461 |
| Bse118I | RCCGGY | 1 cut(s) | 1619 |
| Bse1I | ACTGG | 4 cut(s) | 182, 468, 736, 1770 |
| Bse3DI | GCAATG | 3 cut(s) | 630, 834, 1754 |
| Bse8I | GATNNNNATC | 2 cut(s) | 936, 1412 |
| BseDI | CCNNGG | 3 cut(s) | 287, 813, 987 |
| BseGI | GGATG | 3 cut(s) | 397, 937, 1497 |
| BseJI | GATNNNNATC | 2 cut(s) | 936, 1412 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 110, 188, 386, 463, 1461 |
| BseMI | GCAATG | 3 cut(s) | 630, 834, 1754 |
| BseMII | CTCAG | 4 cut(s) | 236, 443, 486, 1170 |
| BseNI | ACTGG | 4 cut(s) | 182, 468, 736, 1770 |
| BseRI | GAGGAG | 4 cut(s) | 503, 691, 1004, 1196 |
| BseSI | GKGCMC | 1 cut(s) | 1423 |
| BseYI | CCCAGC | 1 cut(s) | 386 |
| BsgI | GTGCAG | 2 cut(s) | 498, 1098 |
| Bsh1236I | CGCG | 1 cut(s) | 87 |
| BshFI | GGCC | 4 cut(s) | 64, 115, 705, 1557 |
| BshNI | GGYRCC | 1 cut(s) | 1597 |
| BsiHKAI | GWGCWC | 2 cut(s) | 539, 1423 |
| BsiSI | CCGG | 1 cut(s) | 1620 |
| BslFI | GGGAC | 2 cut(s) | 142, 1072 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 110, 188, 386, 463, 1461 |
| BsmAI | GTCTC | 3 cut(s) | 618, 735, 835 |
| BsmBI | CGTCTC | 1 cut(s) | 735 |
| BsmFI | GGGAC | 2 cut(s) | 142, 1072 |
| BsmI | GAATGC | 1 cut(s) | 439 |
| BsnI | GGCC | 4 cut(s) | 64, 115, 705, 1557 |
| Bsp1286I | GDGCHC | 2 cut(s) | 539, 1423 |
| Bsp1407I | TGTACA | 1 cut(s) | 1441 |
| Bsp143I | GATC | 3 cut(s) | 715, 1045, 1735 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 495 |
| Bsp19I | CCATGG | 1 cut(s) | 813 |
| BspACI | CCGC | 4 cut(s) | 11, 85, 359, 591 |
| BspANI | GGCC | 4 cut(s) | 64, 115, 705, 1557 |
| BspCNI | CTCAG | 4 cut(s) | 235, 442, 487, 1171 |
| BspFNI | CGCG | 1 cut(s) | 87 |
| BspHI | TCATGA | 2 cut(s) | 1402, 1522 |
| BspLI | GGNNCC | 2 cut(s) | 1453, 1599 |
| BspMAI | CTGCAG | 3 cut(s) | 112, 945, 1089 |
| BspMI | ACCTGC | 2 cut(s) | 619, 937 |
| BspT107I | GGYRCC | 1 cut(s) | 1597 |
| BsrDI | GCAATG | 3 cut(s) | 630, 834, 1754 |
| BsrFI | RCCGGY | 1 cut(s) | 1619 |
| BsrGI | TGTACA | 1 cut(s) | 1441 |
| BsrI | ACTGG | 4 cut(s) | 182, 468, 736, 1770 |
| BssAI | RCCGGY | 1 cut(s) | 1619 |
| BssECI | CCNNGG | 3 cut(s) | 287, 813, 987 |
| BssMI | GATC | 3 cut(s) | 715, 1045, 1735 |
| BssT1I | CCWWGG | 2 cut(s) | 287, 813 |
| Bst4CI | ACNGT | 4 cut(s) | 612, 846, 1063, 1214 |
| Bst6I | CTCTTC | 2 cut(s) | 776, 1462 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1751 |
| BstAUI | TGTACA | 1 cut(s) | 1441 |
| BstC8I | GCNNGC | 4 cut(s) | 238, 263, 381, 1743 |
| BstDEI | CTNAG | 5 cut(s) | 222, 429, 495, 921, 1179 |
| BstDSI | CCRYGG | 1 cut(s) | 813 |
| BstF5I | GGATG | 3 cut(s) | 397, 937, 1497 |
| BstFNI | CGCG | 1 cut(s) | 87 |
| BstKTI | GATC | 3 cut(s) | 718, 1048, 1738 |
| BstMAI | GTCTC | 3 cut(s) | 618, 735, 835 |
| BstMBI | GATC | 3 cut(s) | 715, 1045, 1735 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 93, 292, 356, 434, 443, 1205, 1751 |
| BstNSI | RCATGY | 1 cut(s) | 170 |
| BstSFI | CTRYAG | 5 cut(s) | 108, 204, 941, 1085, 1210 |
| BstSLI | GKGCMC | 1 cut(s) | 1423 |
| BstUI | CGCG | 1 cut(s) | 87 |
| BstV2I | GAAGAC | 1 cut(s) | 1142 |
| BsuRI | GGCC | 4 cut(s) | 64, 115, 705, 1557 |
| BtgI | CCRYGG | 1 cut(s) | 813 |
| BtgZI | GCGATG | 1 cut(s) | 380 |
| BtsCI | GGATG | 3 cut(s) | 397, 937, 1497 |
| BtsI | GCAGTG | 2 cut(s) | 1293, 1421 |
| BtsIMutI | CAGTG | 4 cut(s) | 1293, 1403, 1421, 1423 |
| BveI | ACCTGC | 2 cut(s) | 619, 937 |
| Cac8I | GCNNGC | 4 cut(s) | 238, 263, 381, 1743 |
| CaiI | CAGNNNCTG | 1 cut(s) | 386 |
| CciI | TCATGA | 2 cut(s) | 1402, 1522 |
| Cfr10I | RCCGGY | 1 cut(s) | 1619 |
| Cfr13I | GGNCC | 4 cut(s) | 113, 454, 1291, 1586 |
| Csp6I | GTAC | 6 cut(s) | 135, 724, 1064, 1082, 1442, 1528 |
| CviAII | CATG | 8 cut(s) | 167, 518, 601, 814, 1403, 1472, 1523, 1751 |
| CviQI | GTAC | 6 cut(s) | 135, 724, 1064, 1082, 1442, 1528 |
| DdeI | CTNAG | 5 cut(s) | 222, 429, 495, 921, 1179 |
| DpnI | GATC | 3 cut(s) | 717, 1047, 1737 |
| DpnII | GATC | 3 cut(s) | 715, 1045, 1735 |
| DraI | TTTAAA | 1 cut(s) | 1167 |
| EaeI | YGGCCR | 1 cut(s) | 703 |
| Eam1104I | CTCTTC | 2 cut(s) | 776, 1462 |
| EarI | CTCTTC | 2 cut(s) | 776, 1462 |
| Eco130I | CCWWGG | 2 cut(s) | 287, 813 |
| Eco147I | AGGCCT | 1 cut(s) | 64 |
| Eco47I | GGWCC | 3 cut(s) | 454, 1291, 1586 |
| Eco57I | CTGAAG | 2 cut(s) | 462, 1136 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1586 |
| EcoT14I | CCWWGG | 2 cut(s) | 287, 813 |
| EcoT22I | ATGCAT | 1 cut(s) | 1756 |
| ErhI | CCWWGG | 2 cut(s) | 287, 813 |
| Esp3I | CGTCTC | 1 cut(s) | 735 |
| FaeI | CATG | 8 cut(s) | 170, 521, 604, 817, 1406, 1475, 1526, 1754 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1725, 1757 |
| FaqI | GGGAC | 2 cut(s) | 142, 1072 |
| FatI | CATG | 8 cut(s) | 166, 517, 600, 813, 1402, 1471, 1522, 1750 |
| FbaI | TGATCA | 1 cut(s) | 1045 |
| FokI | GGATG | 3 cut(s) | 384, 944, 1484 |
| FspBI | CTAG | 2 cut(s) | 60, 1136 |
| GsaI | CCCAGC | 1 cut(s) | 390 |
| HaeIII | GGCC | 4 cut(s) | 64, 115, 705, 1557 |
| HapII | CCGG | 1 cut(s) | 1620 |
| Hin1II | CATG | 8 cut(s) | 170, 521, 604, 817, 1406, 1475, 1526, 1754 |
| HindIII | AAGCTT | 1 cut(s) | 444 |
| HinfI | GANTC | 4 cut(s) | 50, 196, 746, 1115 |
| HpaII | CCGG | 1 cut(s) | 1620 |
| HphI | GGTGA | 3 cut(s) | 365, 1346, 1634 |
| Hpy166II | GTNNAC | 5 cut(s) | 82, 1294, 1421, 1442, 1625 |
| Hpy188I | TCNGA | 7 cut(s) | 49, 432, 988, 1029, 1155, 1464, 1502 |
| Hpy188III | TCNNGA | 9 cut(s) | 127, 401, 617, 1322, 1370, 1403, 1508, 1523, 1668 |
| Hpy8I | GTNNAC | 5 cut(s) | 82, 1294, 1421, 1442, 1625 |
| HpyAV | CCTTC | 5 cut(s) | 75, 515, 581, 1085, 1303 |
| HpyCH4III | ACNGT | 4 cut(s) | 612, 846, 1063, 1214 |
| HpyCH4IV | ACGT | 1 cut(s) | 1390 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 93, 292, 356, 434, 443, 1205, 1751 |
| HpyF3I | CTNAG | 5 cut(s) | 222, 429, 495, 921, 1179 |
| HpySE526I | ACGT | 1 cut(s) | 1390 |
| Hsp92II | CATG | 8 cut(s) | 170, 521, 604, 817, 1406, 1475, 1526, 1754 |
| Ksp22I | TGATCA | 1 cut(s) | 1045 |
| Kzo9I | GATC | 3 cut(s) | 715, 1045, 1735 |
| LmnI | GCTCC | 3 cut(s) | 13, 93, 347 |
| LweI | GCATC | 7 cut(s) | 787, 922, 1165, 1327, 1348, 1366, 1506 |
| MaeI | CTAG | 2 cut(s) | 60, 1136 |
| MaeII | ACGT | 1 cut(s) | 1390 |
| MaeIII | GTNAC | 3 cut(s) | 321, 709, 1718 |
| MalI | GATC | 3 cut(s) | 717, 1047, 1737 |
| MboI | GATC | 3 cut(s) | 715, 1045, 1735 |
| MboII | GAAGA | 6 cut(s) | 325, 596, 793, 1142, 1385, 1449 |
| MfeI | CAATTG | 1 cut(s) | 959 |
| MhlI | GDGCHC | 2 cut(s) | 539, 1423 |
| MlyI | GAGTC | 1 cut(s) | 1124 |
| MmeI | TCCRAC | 2 cut(s) | 907, 1706 |
| Mph1103I | ATGCAT | 1 cut(s) | 1756 |
| MseI | TTAA | 4 cut(s) | 186, 374, 1166, 1344 |
| MspA1I | CMGCKG | 4 cut(s) | 107, 386, 440, 512 |
| MspI | CCGG | 1 cut(s) | 1620 |
| MunI | CAATTG | 1 cut(s) | 959 |
| Mva1269I | GAATGC | 1 cut(s) | 439 |
| MvnI | CGCG | 1 cut(s) | 87 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 93, 292, 356, 434, 443, 1205, 1751 |
| NcoI | CCATGG | 1 cut(s) | 813 |
| NdeII | GATC | 3 cut(s) | 715, 1045, 1735 |
| NlaIII | CATG | 8 cut(s) | 170, 521, 604, 817, 1406, 1475, 1526, 1754 |
| NlaIV | GGNNCC | 2 cut(s) | 1453, 1599 |
| NmeAIII | GCCGAG | 1 cut(s) | 518 |
| NsiI | ATGCAT | 1 cut(s) | 1756 |
| NspI | RCATGY | 1 cut(s) | 170 |
| PagI | TCATGA | 2 cut(s) | 1402, 1522 |
| PaqCI | CACCTGC | 1 cut(s) | 619 |
| PceI | AGGCCT | 1 cut(s) | 64 |
| PciI | ACATGT | 1 cut(s) | 166 |
| PctI | GAATGC | 1 cut(s) | 439 |
| PfeI | GAWTC | 3 cut(s) | 50, 196, 746 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 386, 463 |
| PleI | GAGTC | 1 cut(s) | 1123 |
| PpsI | GAGTC | 1 cut(s) | 1123 |
| PpuMI | RGGWCCY | 1 cut(s) | 1586 |
| PscI | ACATGT | 1 cut(s) | 166 |
| Psp5II | RGGWCCY | 1 cut(s) | 1586 |
| PspFI | CCCAGC | 1 cut(s) | 386 |
| PspN4I | GGNNCC | 2 cut(s) | 1453, 1599 |
| PspPI | GGNCC | 4 cut(s) | 113, 454, 1291, 1586 |
| PspPPI | RGGWCCY | 1 cut(s) | 1586 |
| PstI | CTGCAG | 3 cut(s) | 112, 945, 1089 |
| PstNI | CAGNNNCTG | 1 cut(s) | 386 |
| PvuII | CAGCTG | 4 cut(s) | 107, 386, 440, 512 |
| RsaI | GTAC | 6 cut(s) | 136, 725, 1065, 1083, 1443, 1529 |
| RsaNI | GTAC | 6 cut(s) | 135, 724, 1064, 1082, 1442, 1528 |
| SaqAI | TTAA | 4 cut(s) | 186, 374, 1166, 1344 |
| Sau3AI | GATC | 3 cut(s) | 715, 1045, 1735 |
| Sau96I | GGNCC | 4 cut(s) | 113, 454, 1291, 1586 |
| ScaI | AGTACT | 2 cut(s) | 1083, 1529 |
| SchI | GAGTC | 1 cut(s) | 1124 |
| SduI | GDGCHC | 2 cut(s) | 539, 1423 |
| SfaNI | GCATC | 7 cut(s) | 787, 922, 1165, 1327, 1348, 1366, 1506 |
| SfcI | CTRYAG | 5 cut(s) | 108, 204, 941, 1085, 1210 |
| SinI | GGWCC | 3 cut(s) | 454, 1291, 1586 |
| SmlI | CTYRAG | 2 cut(s) | 617, 870 |
| SmoI | CTYRAG | 2 cut(s) | 617, 870 |
| SseBI | AGGCCT | 1 cut(s) | 64 |
| SsiI | CCGC | 4 cut(s) | 11, 85, 359, 591 |
| SspI | AATATT | 1 cut(s) | 1700 |
| SspMI | CTAG | 2 cut(s) | 60, 1136 |
| StuI | AGGCCT | 1 cut(s) | 64 |
| StyI | CCWWGG | 2 cut(s) | 287, 813 |
| TaaI | ACNGT | 4 cut(s) | 612, 846, 1063, 1214 |
| TaiI | ACGT | 1 cut(s) | 1393 |
| TaqI | TCGA | 1 cut(s) | 1369 |
| TatI | WGTACW | 5 cut(s) | 134, 1063, 1081, 1441, 1527 |
| TauI | GCSGC | 1 cut(s) | 362 |
| TfiI | GAWTC | 3 cut(s) | 50, 196, 746 |
| Tru1I | TTAA | 4 cut(s) | 186, 374, 1166, 1344 |
| Tru9I | TTAA | 4 cut(s) | 186, 374, 1166, 1344 |
| TscAI | CASTG | 4 cut(s) | 1293, 1403, 1423, 1428 |
| TspDTI | ATGAA | 6 cut(s) | 42, 398, 534, 959, 1296, 1511 |
| TspGWI | ACGGA | 1 cut(s) | 360 |
| TspRI | CASTG | 4 cut(s) | 1293, 1403, 1423, 1428 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 386, 463 |
| VneI | GTGCAC | 1 cut(s) | 1419 |
| VpaK11BI | GGWCC | 3 cut(s) | 454, 1291, 1586 |
| XapI | RAATTY | 1 cut(s) | 661 |
| XceI | RCATGY | 1 cut(s) | 170 |
| XspI | CTAG | 2 cut(s) | 60, 1136 |
| ZrmI | AGTACT | 2 cut(s) | 1083, 1529 |
| Zsp2I | ATGCAT | 1 cut(s) | 1756 |