Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003791

Physical Location & Seq

Genomic Coordinates Forward (+)

1358723 .. 1360695

Gene Structure 1973 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1018600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGTCTAATAAAAGGCAGAGATTACCATATAGTGCTGCTGAACTAGCAGCAATGGAGGTGAGGGCAATGGAATGCATCAGGCAGTTAATTCTTAGATCCAGTGAAGCCCTGTTTCTGCTCCAGCTTCTTTCACAGCACCATGTCACACGCCTGGTTCAGGGGCTTGATGCTAACACAAGACATAAATTAATTGGAATGACATTTCATCAGTTAGTTTGTTCGGAGGAAGGTGACCACCTTGTGACAAGGCTAATATCTGCACTTGTGGAGTATTATACCGGTCCAGATGGCAGGGGGGCAGTAGATGATATTAGTGGGAGATTACGGGAAGGCTGTCCAAGCTATTATAAGGAGTCTGATCACAAGTTTTTTCTAGCTGTGGAGTGTCTTGAGAGAGCTGCTGTAACTCCAGATCCTGAGAAGGATAGTCTTGCTAGAGAAGCCTTCAATTTCTTAATGGTTCGCTTGCCTTTACAAAAGGCACAGGCTCTTGACCCAGCTGGTGATGCTTTTAATGACCAAATTGATGCAGCAGTTAGAGAGCATGCACTTGCTCAACGTGAACAGTGCTATGAGATTGTCATCAGTGCATTGCGTTCTCTGAAAGGCAAGCCTTCTCAGAGGGAGTTTGGTTCTCCTTTGAGGCCTGCTGCACGATCTGTCCTTGATCAGGTCTCTCGGAACAAATATATTTCCCAGATTGTTCAGCTGGGCATTCAGTCCCCTGACAGATTATTTCACGAGTATTTATATCGTGCTATGATTGATTTGGGCCTTGAAAATGCATTGTTGGAGTATGGAGGTCCTGATTTGGTGCCATTTCTAGAAAGTGCTATTTCTGGGGTAACATCGGCCGGTTCTCCAATTGGTCACTCAGGAACAAGCATCCCATCCCATCAAGCCAAATATTCTGAACTGTTGGCACGGTATTATGTCTTGAAGAGGCAGCATCTGCTTGCAGCTCGTGTATTACTGAGACTGGCAGAGAGGCGCTCAAATGACACGGTGGATGTTCCTGCTCTAGATCAGAGGTATCATTACCTAAGCAATGCAGTCCTACAGGCAAAAAATGCAAGTAACAATGATGGCATGGTAGGTTCTGCTCGAAGTGCTTATGATGATGGGTTGTTAGATTTGTTGGAAGGAAAGCTTTCTGTCCTTCGTTTTCAGATAAAGATCAAGGAGGAACTTGAGGCTTTTGCTTCCAGGATAGAAGCTTTGCCTGATGCATTGGAGCCTGTCCAAAGCGGAACTTCTGGTGATGCCAATCTTGCAATTATTGCACTAGAAAAGGCCAAGGAGCTATCATTAGATTTAAAGGAAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000972 GO:0003674 GO:0005198 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0005737 GO:0005886 GO:0005911 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006998 GO:0008104 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010256 GO:0010467 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0017038 GO:0017056 GO:0030054 GO:0031090 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036228 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044611 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051236 GO:0051276 GO:0051641 GO:0051649 GO:0051704 GO:0055044 GO:0061024 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0072594 GO:0072657 GO:0090435

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nucleoporin_C Nucleoporin_N

Protein Analysis

443

Amino Acids

49.05

Weight (kDa)

5.99

Isoelectric Point (pI)

45.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleoporin_C	PF03177	18 - 141	9.9e-15	Non-repetitive/WGA-negative nucleoporin C-terminal
Nucleoporin_C	PF03177	154 - 399	1.1e-25	Non-repetitive/WGA-negative nucleoporin C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14850
fragaria_vesca	FvH4_4g33560 FvH4_4g33560 FvH4_4g33560
malus_domestica	MD13G1020400.v1.1 MD16G1018600.v1.1 MD16G1018800.v1.1
prunus_persica	Prupe.1G333300_v2.0.a1
pyrus_communis	pycom13g01720 pycom16g01690
rosa_chinensis	RchiOBHm_Chr2g0167011 RchiOBHm_Chr2g0167021 RchiOBHm_Chr4g0443061
rosa_laevigata	RLG00000005957 RLG00000021689
rosa_multiflora	Rmu_co7980658.1_g000001 Rmu_sc0007968.1_g000017 Rmu_sc0008069.1_g000005 Rmu_sc0010966.1_g000010 Rmu_sc0039405.1_g000001 Rmu_sc0039405.1_g000002
rosa_roxburghii	Rroxscaffold_2G00083800 Rroxscaffold_5G00383690
rosa_rugosa	Rorug04G0344100
rosa_samantha	Rh2AG594500 Rh2AG594600 Rh2BG605800 Rh2BG605900 Rh2CG576700 Rh2DG617400 Rh4BG409900 Rh4DG404800
rosa_wichuraiana	Rw2G049490 Rw4G034330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	348
AccB1I	GGYRCC	1 cut(s)	814
AciI	CCGC	1 cut(s)	1248
AclWI	GGATC	2 cut(s)	90, 407
AcoI	YGGCCR	1 cut(s)	852
AdeI	CACNNNGTG	1 cut(s)	241
AfiI	CCNNNNNNNGG	2 cut(s)	157, 670
AgeI	ACCGGT	1 cut(s)	278
AgsI	TTSAA	3 cut(s)	448, 779, 940
AjnI	CCWGG	2 cut(s)	150, 1205
Alw26I	GTCTC	2 cut(s)	679, 970
AlwI	GGATC	2 cut(s)	90, 407
AlwNI	CAGNNNCTG	2 cut(s)	416, 952
AoxI	GGCC	4 cut(s)	644, 772, 852, 1293
ApeKI	GCWGC	7 cut(s)	35, 47, 398, 530, 650, 946, 959
AseI	ATTAAT	1 cut(s)	188
AsiGI	ACCGGT	1 cut(s)	278
Asp700I	GAANNNNTTC	1 cut(s)	1150
AspLEI	GCGC	1 cut(s)	993
AspS9I	GGNCC	3 cut(s)	281, 772, 803
AsuHPI	GGTGA	4 cut(s)	70, 242, 515, 1271
AvaII	GGWCC	2 cut(s)	281, 803
BanI	GGYRCC	1 cut(s)	814
BauI	CACGAG	2 cut(s)	740, 963
BbvI	GCAGC	7 cut(s)	22, 59, 385, 542, 637, 958, 971
BccI	CCATC	5 cut(s)	281, 898, 903, 1079, 1115
BciT130I	CCWGG	2 cut(s)	152, 1207
BclI	TGATCA	2 cut(s)	358, 667
BcoDI	GTCTC	2 cut(s)	679, 970
BfaI	CTAG	6 cut(s)	44, 374, 435, 824, 1022, 1286
BfmI	CTRYAG	1 cut(s)	1058
BfoI	RGCGCY	1 cut(s)	994
BisI	GCNGC	7 cut(s)	36, 48, 399, 531, 651, 947, 960
BlsI	GCNGC	7 cut(s)	37, 49, 400, 532, 652, 948, 961
Bme1390I	CCNGG	2 cut(s)	152, 1207
Bme18I	GGWCC	2 cut(s)	281, 803
BmgT120I	GGNCC	3 cut(s)	281, 772, 803
BmiI	GGNNCC	2 cut(s)	816, 1236
BmrFI	CCNGG	2 cut(s)	152, 1207
BmsI	GCATC	8 cut(s)	84, 157, 496, 517, 894, 958, 1216, 1252
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	2 cut(s)	104, 393
Bpu10I	CCTNAGC	1 cut(s)	1043
BpuEI	CTTGAG	2 cut(s)	410, 1211
BsaBI	GATNNNNATC	3 cut(s)	581, 1175, 1266
BsaI	GGTCTC	1 cut(s)	679
BsaJI	CCNNGG	1 cut(s)	1296
BsaWI	WCCGGW	1 cut(s)	278
Bsc4I	CCNNNNNNNGG	2 cut(s)	157, 670
Bse118I	RCCGGY	2 cut(s)	278, 854
Bse1I	ACTGG	2 cut(s)	99, 984
Bse3DI	GCAATG	4 cut(s)	57, 72, 590, 1054
Bse8I	GATNNNNATC	3 cut(s)	581, 1175, 1266
BseBI	CCWGG	2 cut(s)	152, 1207
BseDI	CCNNGG	1 cut(s)	1296
BseGI	GGATG	3 cut(s)	885, 890, 1015
BseJI	GATNNNNATC	3 cut(s)	581, 1175, 1266
BseLI	CCNNNNNNNGG	2 cut(s)	157, 670
BseMI	GCAATG	4 cut(s)	57, 72, 590, 1054
BseMII	CTCAG	4 cut(s)	408, 632, 888, 965
BseNI	ACTGG	2 cut(s)	99, 984
BseX3I	CGGCCG	1 cut(s)	852
BseXI	GCAGC	7 cut(s)	22, 59, 385, 542, 637, 958, 971
BseYI	CCCAGC	2 cut(s)	496, 709
BsgI	GTGCAG	2 cut(s)	243, 636
Bsh1285I	CGRYCG	1 cut(s)	855
BshFI	GGCC	4 cut(s)	646, 774, 854, 1295
BshNI	GGYRCC	1 cut(s)	814
BshTI	ACCGGT	1 cut(s)	278
BsiEI	CGRYCG	1 cut(s)	855
BsiSI	CCGG	2 cut(s)	279, 855
BslFI	GGGAC	1 cut(s)	706
BslI	CCNNNNNNNGG	2 cut(s)	157, 670
BsmAI	GTCTC	2 cut(s)	679, 970
BsmFI	GGGAC	1 cut(s)	706
BsmI	GAATGC	2 cut(s)	77, 714
BsnI	GGCC	4 cut(s)	646, 774, 854, 1295
Bso31I	GGTCTC	1 cut(s)	679
Bsp143I	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
BspACI	CCGC	1 cut(s)	1248
BspANI	GGCC	4 cut(s)	646, 774, 854, 1295
BspCNI	CTCAG	4 cut(s)	409, 631, 887, 966
BspLI	GGNNCC	2 cut(s)	816, 1236
BspPI	GGATC	2 cut(s)	90, 407
BspT107I	GGYRCC	1 cut(s)	814
BspTNI	GGTCTC	1 cut(s)	679
BsrDI	GCAATG	4 cut(s)	57, 72, 590, 1054
BsrFI	RCCGGY	2 cut(s)	278, 854
BsrI	ACTGG	2 cut(s)	99, 984
BssAI	RCCGGY	2 cut(s)	278, 854
BssECI	CCNNGG	1 cut(s)	1296
BssMI	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
BssSI	CACGAG	2 cut(s)	740, 963
BssT1I	CCWWGG	1 cut(s)	1296
Bst2BI	CACGAG	2 cut(s)	740, 963
Bst2UI	CCWGG	2 cut(s)	152, 1207
Bst4CI	ACNGT	4 cut(s)	567, 918, 927, 1006
Bst6I	CTCTTC	1 cut(s)	935
BstAPI	GCANNNNNTGC	3 cut(s)	952, 1070, 1280
BstC8I	GCNNGC	5 cut(s)	467, 546, 611, 648, 957
BstDEI	CTNAG	6 cut(s)	92, 417, 618, 874, 974, 1043
BstEII	GGTNACC	1 cut(s)	230
BstENI	CCTNNNNNAGG	2 cut(s)	155, 668
BstF5I	GGATG	3 cut(s)	885, 890, 1015
BstH2I	RGCGCY	1 cut(s)	994
BstHHI	GCGC	1 cut(s)	993
BstKTI	GATC	7 cut(s)	98, 361, 415, 659, 670, 1027, 1179
BstMAI	GTCTC	2 cut(s)	679, 970
BstMBI	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
BstMCI	CGRYCG	1 cut(s)	855
BstMWI	GCNNNNNNNGC	9 cut(s)	44, 339, 440, 506, 952, 1070, 1109, 1271, 1280
BstNI	CCWGG	2 cut(s)	152, 1207
BstNSI	RCATGY	1 cut(s)	548
BstPI	GGTNACC	1 cut(s)	230
BstSCI	CCNGG	2 cut(s)	150, 1205
BstSFI	CTRYAG	1 cut(s)	1058
BstV1I	GCAGC	7 cut(s)	22, 59, 385, 542, 637, 958, 971
BstX2I	RGATCY	2 cut(s)	95, 412
BstYI	RGATCY	2 cut(s)	95, 412
BstZI	CGGCCG	1 cut(s)	852
BsuRI	GGCC	4 cut(s)	646, 774, 854, 1295
BtsCI	GGATG	3 cut(s)	885, 890, 1015
BtsIMutI	CAGTG	3 cut(s)	106, 572, 592
Cac8I	GCNNGC	5 cut(s)	467, 546, 611, 648, 957
CaiI	CAGNNNCTG	2 cut(s)	416, 952
CfoI	GCGC	1 cut(s)	993
Cfr10I	RCCGGY	2 cut(s)	278, 854
Cfr13I	GGNCC	3 cut(s)	281, 772, 803
CspAI	ACCGGT	1 cut(s)	278
CviAII	CATG	3 cut(s)	140, 545, 1090
DdeI	CTNAG	6 cut(s)	92, 417, 618, 874, 974, 1043
DpnI	GATC	7 cut(s)	97, 360, 414, 658, 669, 1026, 1178
DpnII	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
DraI	TTTAAA	1 cut(s)	1317
DraIII	CACNNNGTG	1 cut(s)	241
EaeI	YGGCCR	1 cut(s)	852
EagI	CGGCCG	1 cut(s)	852
Eam1104I	CTCTTC	1 cut(s)	935
EarI	CTCTTC	1 cut(s)	935
EclXI	CGGCCG	1 cut(s)	852
Eco130I	CCWWGG	1 cut(s)	1296
Eco147I	AGGCCT	1 cut(s)	646
Eco31I	GGTCTC	1 cut(s)	679
Eco47I	GGWCC	2 cut(s)	281, 803
Eco52I	CGGCCG	1 cut(s)	852
Eco91I	GGTNACC	1 cut(s)	230
EcoNI	CCTNNNNNAGG	2 cut(s)	155, 668
EcoO109I	RGGNCCY	1 cut(s)	803
EcoO65I	GGTNACC	1 cut(s)	230
EcoRII	CCWGG	2 cut(s)	150, 1205
EcoT14I	CCWWGG	1 cut(s)	1296
EcoT22I	ATGCAT	3 cut(s)	77, 787, 1231
ErhI	CCWWGG	1 cut(s)	1296
FaeI	CATG	3 cut(s)	143, 548, 1093
FalI	AAGNNNNNCTT	4 cut(s)	1134, 1166, 1237, 1269
FaqI	GGGAC	1 cut(s)	706
FatI	CATG	3 cut(s)	139, 544, 1089
FbaI	TGATCA	2 cut(s)	358, 667
Fnu4HI	GCNGC	7 cut(s)	36, 48, 399, 531, 651, 947, 960
FokI	GGATG	3 cut(s)	872, 877, 1022
Fsp4HI	GCNGC	7 cut(s)	36, 48, 399, 531, 651, 947, 960
FspBI	CTAG	6 cut(s)	44, 374, 435, 824, 1022, 1286
GlaI	GCGC	1 cut(s)	992
GluI	GCNGC	7 cut(s)	36, 48, 399, 531, 651, 947, 960
GsaI	CCCAGC	2 cut(s)	500, 713
GsuI	CTGGAG	2 cut(s)	104, 393
HaeII	RGCGCY	1 cut(s)	994
HaeIII	GGCC	4 cut(s)	646, 774, 854, 1295
HapII	CCGG	2 cut(s)	279, 855
HhaI	GCGC	1 cut(s)	993
Hin1II	CATG	3 cut(s)	143, 548, 1093
Hin6I	GCGC	1 cut(s)	991
HinP1I	GCGC	1 cut(s)	991
HindIII	AAGCTT	2 cut(s)	1148, 1215
HinfI	GANTC	1 cut(s)	353
HpaII	CCGG	2 cut(s)	279, 855
HphI	GGTGA	4 cut(s)	70, 242, 515, 1271
Hpy166II	GTNNAC	1 cut(s)	563
Hpy188I	TCNGA	8 cut(s)	223, 358, 603, 621, 681, 913, 1029, 1170
Hpy8I	GTNNAC	1 cut(s)	563
HpyAV	CCTTC	7 cut(s)	221, 323, 415, 454, 624, 1136, 1169
HpyCH4III	ACNGT	4 cut(s)	567, 918, 927, 1006
HpyCH4IV	ACGT	1 cut(s)	559
HpyF10VI	GCNNNNNNNGC	9 cut(s)	44, 339, 440, 506, 952, 1070, 1109, 1271, 1280
HpyF3I	CTNAG	6 cut(s)	92, 417, 618, 874, 974, 1043
HpySE526I	ACGT	1 cut(s)	559
Hsp92II	CATG	3 cut(s)	143, 548, 1093
HspAI	GCGC	1 cut(s)	991
Ksp22I	TGATCA	2 cut(s)	358, 667
Kzo9I	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
LmnI	GCTCC	3 cut(s)	123, 1234, 1300
Lsp1109I	GCAGC	7 cut(s)	22, 59, 385, 542, 637, 958, 971
LweI	GCATC	8 cut(s)	84, 157, 496, 517, 894, 958, 1216, 1252
MaeI	CTAG	6 cut(s)	44, 374, 435, 824, 1022, 1286
MaeII	ACGT	1 cut(s)	559
MaeIII	GTNAC	7 cut(s)	142, 230, 241, 403, 844, 869, 1076
MalI	GATC	7 cut(s)	97, 360, 414, 658, 669, 1026, 1178
MboI	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
MboII	GAAGA	1 cut(s)	952
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	2 cut(s)	95, 412
MluCI	AATT	8 cut(s)	87, 185, 189, 448, 522, 864, 1275, 1324
MlyI	GAGTC	1 cut(s)	362
MmeI	TCCRAC	2 cut(s)	771, 1119
Mph1103I	ATGCAT	3 cut(s)	77, 787, 1231
MroXI	GAANNNNTTC	1 cut(s)	1150
MseI	TTAA	6 cut(s)	86, 188, 455, 513, 1316, 1327
MspA1I	CMGCKG	2 cut(s)	500, 709
MspI	CCGG	2 cut(s)	279, 855
MspR9I	CCNGG	2 cut(s)	152, 1207
MunI	CAATTG	1 cut(s)	864
Mva1269I	GAATGC	2 cut(s)	77, 714
MvaI	CCWGG	2 cut(s)	152, 1207
MwoI	GCNNNNNNNGC	9 cut(s)	44, 339, 440, 506, 952, 1070, 1109, 1271, 1280
NdeII	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
NlaIII	CATG	3 cut(s)	143, 548, 1093
NlaIV	GGNNCC	2 cut(s)	816, 1236
NmuCI	GTSAC	4 cut(s)	142, 230, 241, 869
NsiI	ATGCAT	3 cut(s)	77, 787, 1231
NspI	RCATGY	1 cut(s)	548
PaeI	GCATGC	1 cut(s)	548
PceI	AGGCCT	1 cut(s)	646
PctI	GAATGC	2 cut(s)	77, 714
PdmI	GAANNNNTTC	1 cut(s)	1150
PfoI	TCCNGGA	1 cut(s)	1205
PinAI	ACCGGT	1 cut(s)	278
PkrI	GCNGC	7 cut(s)	37, 49, 400, 532, 652, 948, 961
PleI	GAGTC	1 cut(s)	361
PpsI	GAGTC	1 cut(s)	361
PpuMI	RGGWCCY	1 cut(s)	803
PshBI	ATTAAT	1 cut(s)	188
PsiI	TTATAA	1 cut(s)	348
Psp5II	RGGWCCY	1 cut(s)	803
Psp6I	CCWGG	2 cut(s)	150, 1205
PspEI	GGTNACC	1 cut(s)	230
PspFI	CCCAGC	2 cut(s)	496, 709
PspGI	CCWGG	2 cut(s)	150, 1205
PspN4I	GGNNCC	2 cut(s)	816, 1236
PspPI	GGNCC	3 cut(s)	281, 772, 803
PspPPI	RGGWCCY	1 cut(s)	803
PstNI	CAGNNNCTG	2 cut(s)	416, 952
PsuI	RGATCY	2 cut(s)	95, 412
PvuII	CAGCTG	2 cut(s)	500, 709
SaqAI	TTAA	6 cut(s)	86, 188, 455, 513, 1316, 1327
SatI	GCNGC	7 cut(s)	36, 48, 399, 531, 651, 947, 960
Sau3AI	GATC	7 cut(s)	95, 358, 412, 656, 667, 1024, 1176
Sau96I	GGNCC	3 cut(s)	281, 772, 803
SchI	GAGTC	1 cut(s)	362
ScrFI	CCNGG	2 cut(s)	152, 1207
SfaNI	GCATC	8 cut(s)	84, 157, 496, 517, 894, 958, 1216, 1252
SfcI	CTRYAG	1 cut(s)	1058
SinI	GGWCC	2 cut(s)	281, 803
SmlI	CTYRAG	2 cut(s)	389, 1190
SmoI	CTYRAG	2 cut(s)	389, 1190
SphI	GCATGC	1 cut(s)	548
Sse9I	AATT	8 cut(s)	87, 185, 189, 448, 522, 864, 1275, 1324
SseBI	AGGCCT	1 cut(s)	646
SsiI	CCGC	1 cut(s)	1248
SspI	AATATT	1 cut(s)	908
SspMI	CTAG	6 cut(s)	44, 374, 435, 824, 1022, 1286
StuI	AGGCCT	1 cut(s)	646
StyD4I	CCNGG	2 cut(s)	150, 1205
StyI	CCWWGG	1 cut(s)	1296
TaaI	ACNGT	4 cut(s)	567, 918, 927, 1006
TaiI	ACGT	1 cut(s)	562
TaqI	TCGA	1 cut(s)	1105
TasI	AATT	8 cut(s)	87, 185, 189, 448, 522, 864, 1275, 1324
Tru1I	TTAA	6 cut(s)	86, 188, 455, 513, 1316, 1327
Tru9I	TTAA	6 cut(s)	86, 188, 455, 513, 1316, 1327
TscAI	CASTG	3 cut(s)	106, 572, 592
TseFI	GTSAC	4 cut(s)	142, 230, 241, 869
TseI	GCWGC	7 cut(s)	35, 47, 398, 530, 650, 946, 959
Tsp45I	GTSAC	4 cut(s)	142, 230, 241, 869
TspDTI	ATGAA	1 cut(s)	194
TspRI	CASTG	3 cut(s)	106, 572, 592
VpaK11BI	GGWCC	2 cut(s)	281, 803
VspI	ATTAAT	1 cut(s)	188
XagI	CCTNNNNNAGG	2 cut(s)	155, 668
XbaI	TCTAGA	2 cut(s)	823, 1021
XceI	RCATGY	1 cut(s)	548
XmnI	GAANNNNTTC	1 cut(s)	1150
XspI	CTAG	6 cut(s)	44, 374, 435, 824, 1022, 1286
Zsp2I	ATGCAT	3 cut(s)	77, 787, 1231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.