Nuclear pore complex protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14850 |
| fragaria_vesca | FvH4_4g33560 FvH4_4g33560 FvH4_4g33560 |
| malus_domestica | MD13G1020400.v1.1 MD16G1018600.v1.1 MD16G1018800.v1.1 |
| prunus_persica | Prupe.1G333300_v2.0.a1 |
| pyrus_communis | pycom13g01720 pycom16g01690 |
| rosa_chinensis | RchiOBHm_Chr2g0167011 RchiOBHm_Chr2g0167021 RchiOBHm_Chr4g0443061 |
| rosa_laevigata | RLG00000005957 RLG00000021689 |
| rosa_multiflora | Rmu_co7980658.1_g000001 Rmu_sc0007968.1_g000017 Rmu_sc0008069.1_g000005 Rmu_sc0010966.1_g000010 Rmu_sc0039405.1_g000001 Rmu_sc0039405.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083800 Rroxscaffold_5G00383690 |
| rosa_rugosa | Rorug04G0344100 |
| rosa_samantha | Rh2AG594500 Rh2AG594600 Rh2BG605800 Rh2BG605900 Rh2CG576700 Rh2DG617400 Rh4BG409900 Rh4DG404800 |
| rosa_wichuraiana | Rw2G049490 Rw4G034330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 21 |
| AciI | CCGC | 1 cut(s) | 30 |
| AluBI | AGCT | 1 cut(s) | 133 |
| AluI | AGCT | 1 cut(s) | 133 |
| Alw26I | GTCTC | 2 cut(s) | 43, 99 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| AspLEI | GCGC | 1 cut(s) | 44 |
| AspS9I | GGNCC | 1 cut(s) | 165 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 104 |
| AvaII | GGWCC | 1 cut(s) | 165 |
| BcoDI | GTCTC | 2 cut(s) | 43, 99 |
| BfaI | CTAG | 1 cut(s) | 68 |
| BfmI | CTRYAG | 1 cut(s) | 15 |
| BfoI | RGCGCY | 1 cut(s) | 45 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| Bme18I | GGWCC | 1 cut(s) | 165 |
| BmgT120I | GGNCC | 1 cut(s) | 165 |
| BpuEI | CTTGAG | 1 cut(s) | 149 |
| BsmAI | GTCTC | 2 cut(s) | 43, 99 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspACI | CCGC | 1 cut(s) | 30 |
| BspMAI | CTGCAG | 1 cut(s) | 19 |
| BssMI | GATC | 1 cut(s) | 3 |
| Bst4CI | ACNGT | 1 cut(s) | 92 |
| Bst6I | CTCTTC | 1 cut(s) | 140 |
| BstH2I | RGCGCY | 1 cut(s) | 45 |
| BstHHI | GCGC | 1 cut(s) | 44 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMAI | GTCTC | 2 cut(s) | 43, 99 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstSFI | CTRYAG | 1 cut(s) | 15 |
| BtgZI | GCGATG | 1 cut(s) | 58 |
| BtsI | GCAGTG | 1 cut(s) | 9 |
| BtsIMutI | CAGTG | 2 cut(s) | 9, 145 |
| CfoI | GCGC | 1 cut(s) | 44 |
| Cfr13I | GGNCC | 1 cut(s) | 165 |
| CviJI | RGCY | 1 cut(s) | 133 |
| CviKI_1 | RGCY | 1 cut(s) | 133 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 140 |
| EarI | CTCTTC | 1 cut(s) | 140 |
| Eco47I | GGWCC | 1 cut(s) | 165 |
| FaiI | YATR | 3 cut(s) | 60, 121, 162 |
| FauI | CCCGC | 1 cut(s) | 37 |
| FblI | GTMKAC | 1 cut(s) | 21 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| FspBI | CTAG | 1 cut(s) | 68 |
| GlaI | GCGC | 1 cut(s) | 43 |
| GluI | GCNGC | 1 cut(s) | 15 |
| HaeII | RGCGCY | 1 cut(s) | 45 |
| HhaI | GCGC | 1 cut(s) | 44 |
| Hin6I | GCGC | 1 cut(s) | 42 |
| HinP1I | GCGC | 1 cut(s) | 42 |
| HinfI | GANTC | 1 cut(s) | 51 |
| HphI | GGTGA | 2 cut(s) | 46, 104 |
| Hpy166II | GTNNAC | 1 cut(s) | 22 |
| Hpy188I | TCNGA | 1 cut(s) | 48 |
| Hpy188III | TCNNGA | 1 cut(s) | 68 |
| Hpy8I | GTNNAC | 1 cut(s) | 22 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4III | ACNGT | 1 cut(s) | 92 |
| HpyCH4V | TGCA | 1 cut(s) | 17 |
| HspAI | GCGC | 1 cut(s) | 42 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| MaeI | CTAG | 1 cut(s) | 68 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MboII | GAAGA | 3 cut(s) | 157, 188, 191 |
| MluCI | AATT | 3 cut(s) | 61, 116, 190 |
| MlyI | GAGTC | 1 cut(s) | 45 |
| MnlI | CCTC | 1 cut(s) | 141 |
| MseI | TTAA | 2 cut(s) | 189, 193 |
| NdeII | GATC | 1 cut(s) | 3 |
| PacI | TTAATTAA | 1 cut(s) | 193 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PleI | GAGTC | 1 cut(s) | 45 |
| PpsI | GAGTC | 1 cut(s) | 45 |
| PspPI | GGNCC | 1 cut(s) | 165 |
| PstI | CTGCAG | 1 cut(s) | 19 |
| SaqAI | TTAA | 2 cut(s) | 189, 193 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| Sau96I | GGNCC | 1 cut(s) | 165 |
| SchI | GAGTC | 1 cut(s) | 45 |
| SetI | ASST | 3 cut(s) | 59, 135, 167 |
| SfcI | CTRYAG | 1 cut(s) | 15 |
| SgeI | CNNG | 7 cut(s) | 41, 49, 51, 57, 80, 116, 140 |
| SinI | GGWCC | 1 cut(s) | 165 |
| SmlI | CTYRAG | 1 cut(s) | 128 |
| SmoI | CTYRAG | 1 cut(s) | 128 |
| Sse9I | AATT | 3 cut(s) | 61, 116, 190 |
| SsiI | CCGC | 1 cut(s) | 30 |
| SspMI | CTAG | 1 cut(s) | 68 |
| TaaI | ACNGT | 1 cut(s) | 92 |
| TaqII | GACCGA | 1 cut(s) | 39 |
| TasI | AATT | 3 cut(s) | 61, 116, 190 |
| Tru1I | TTAA | 2 cut(s) | 189, 193 |
| Tru9I | TTAA | 2 cut(s) | 189, 193 |
| TscAI | CASTG | 2 cut(s) | 16, 145 |
| TseI | GCWGC | 1 cut(s) | 14 |
| TspRI | CASTG | 2 cut(s) | 16, 145 |
| VpaK11BI | GGWCC | 1 cut(s) | 165 |
| XbaI | TCTAGA | 1 cut(s) | 67 |
| XmiI | GTMKAC | 1 cut(s) | 21 |
| XspI | CTAG | 1 cut(s) | 68 |