Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14850 |
| fragaria_vesca | FvH4_4g33560 FvH4_4g33560 FvH4_4g33560 |
| malus_domestica | MD13G1020400.v1.1 MD16G1018600.v1.1 MD16G1018800.v1.1 |
| prunus_persica | Prupe.1G333300_v2.0.a1 |
| pyrus_communis | pycom13g01720 pycom16g01690 |
| rosa_chinensis | RchiOBHm_Chr2g0167011 RchiOBHm_Chr2g0167021 RchiOBHm_Chr4g0443061 |
| rosa_laevigata | RLG00000005957 RLG00000021689 |
| rosa_multiflora | Rmu_co7980658.1_g000001 Rmu_sc0007968.1_g000017 Rmu_sc0008069.1_g000005 Rmu_sc0010966.1_g000010 Rmu_sc0039405.1_g000001 Rmu_sc0039405.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00083800 Rroxscaffold_5G00383690 |
| rosa_rugosa | Rorug04G0344100 |
| rosa_samantha | Rh2AG594500 Rh2AG594600 Rh2BG605800 Rh2BG605900 Rh2CG576700 Rh2DG617400 Rh4BG409900 Rh4DG404800 |
| rosa_wichuraiana | Rw2G049490 Rw4G034330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1787, 2021, 2643 |
| AarI | CACCTGC | 1 cut(s) | 2858 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 764, 942 |
| Acc36I | ACCTGC | 1 cut(s) | 2858 |
| AccB1I | GGYRCC | 1 cut(s) | 3181 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 159, 557 |
| AccI | GTMKAC | 3 cut(s) | 542, 922, 992 |
| AccII | CGCG | 3 cut(s) | 30, 83, 1596 |
| AciI | CCGC | 9 cut(s) | 44, 64, 354, 1196, 1384, 1811, 1890, 2331, 2865 |
| AclWI | GGATC | 8 cut(s) | 369, 497, 661, 915, 2385, 2702, 2855, 3966 |
| AcoI | YGGCCR | 3 cut(s) | 70, 161, 622 |
| AcsI | RAATTY | 3 cut(s) | 244, 1703, 2248 |
| AcuI | CTGAAG | 6 cut(s) | 812, 834, 1335, 1836, 3612, 3873 |
| AcvI | CACGTG | 1 cut(s) | 582 |
| AdeI | CACNNNGTG | 1 cut(s) | 3930 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 159, 557, 1073, 1154, 1412, 1896, 2146, 3037, 3902 |
| AflII | CTTAAG | 1 cut(s) | 2749 |
| AflIII | ACRYGT | 2 cut(s) | 572, 581 |
| AhlI | ACTAGT | 1 cut(s) | 4181 |
| AjiI | CACGTC | 1 cut(s) | 3807 |
| AjnI | CCWGG | 6 cut(s) | 5, 400, 1364, 1685, 3572, 3895 |
| Alw21I | GWGCWC | 2 cut(s) | 1954, 3832 |
| Alw44I | GTGCAC | 1 cut(s) | 1950 |
| AlwI | GGATC | 8 cut(s) | 369, 497, 661, 915, 2385, 2702, 2855, 3966 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2768, 3319 |
| Ama87I | CYCGRG | 5 cut(s) | 266, 1374, 3471, 3941, 4269 |
| ApaLI | GTGCAC | 1 cut(s) | 1950 |
| ApoI | RAATTY | 3 cut(s) | 244, 1703, 2248 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 658, 690 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 420, 3517 |
| AspLEI | GCGC | 4 cut(s) | 30, 1596, 3360, 3479 |
| AspS9I | GGNCC | 8 cut(s) | 860, 935, 944, 1551, 2127, 2576, 3139, 3170 |
| AvaI | CYCGRG | 5 cut(s) | 266, 1374, 3471, 3941, 4269 |
| AvaII | GGWCC | 5 cut(s) | 935, 944, 2127, 2576, 3170 |
| AxyI | CCTNAGG | 1 cut(s) | 4103 |
| BaeGI | GKGCMC | 2 cut(s) | 1381, 1954 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 115, 148 |
| BalI | TGGCCA | 2 cut(s) | 163, 624 |
| BanI | GGYRCC | 1 cut(s) | 3181 |
| BanII | GRGCYC | 3 cut(s) | 1965, 3832, 4012 |
| BauI | CACGAG | 3 cut(s) | 3107, 3330, 3651 |
| BbrPI | CACGTG | 1 cut(s) | 582 |
| BbsI | GAAGAC | 1 cut(s) | 1833 |
| Bbv12I | GWGCWC | 2 cut(s) | 1954, 3832 |
| BceAI | ACGGC | 5 cut(s) | 57, 1299, 2459, 3169, 4251 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2769, 2803, 3932, 3966 |
| BciT130I | CCWGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| BciVI | GTATCC | 1 cut(s) | 178 |
| BclI | TGATCA | 1 cut(s) | 3034 |
| BcuI | ACTAGT | 1 cut(s) | 4181 |
| BfmI | CTRYAG | 3 cut(s) | 524, 2697, 3425 |
| BfoI | RGCGCY | 2 cut(s) | 3361, 3480 |
| BfrI | CTTAAG | 1 cut(s) | 2749 |
| BfuAI | ACCTGC | 1 cut(s) | 2858 |
| BfuI | GTATCC | 1 cut(s) | 178 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1591, 1730 |
| BglII | AGATCT | 1 cut(s) | 2179 |
| BlpI | GCTNAGC | 1 cut(s) | 1932 |
| BmcAI | AGTACT | 3 cut(s) | 1348, 1612, 4137 |
| Bme1390I | CCNGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| Bme18I | GGWCC | 5 cut(s) | 935, 944, 2127, 2576, 3170 |
| BmeT110I | CYCGRG | 5 cut(s) | 266, 1374, 3471, 3941, 4269 |
| BmgBI | CACGTC | 1 cut(s) | 3807 |
| BmgT120I | GGNCC | 8 cut(s) | 860, 935, 944, 1551, 2127, 2576, 3139, 3170 |
| BmiI | GGNNCC | 5 cut(s) | 1723, 2138, 2206, 3183, 3603 |
| BmrFI | CCNGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| BmrI | ACTGGG | 1 cut(s) | 1347 |
| BmuI | ACTGGG | 1 cut(s) | 1347 |
| BoxI | GACNNNNGTC | 1 cut(s) | 594 |
| BpiI | GAAGAC | 1 cut(s) | 1833 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3344, 3376 |
| BpmI | CTGGAG | 6 cut(s) | 504, 1266, 2399, 2688, 3918, 4212 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1932 |
| BpuEI | CTTGAG | 5 cut(s) | 1877, 2093, 2251, 2705, 3578 |
| Bsa29I | ATCGAT | 2 cut(s) | 952, 4264 |
| BsaAI | YACGTR | 1 cut(s) | 582 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2948, 3542, 3633 |
| BsaI | GGTCTC | 3 cut(s) | 523, 1209, 3046 |
| BsaJI | CCNNGG | 5 cut(s) | 6, 1685, 2233, 3663, 4249 |
| BsaWI | WCCGGW | 1 cut(s) | 3221 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1048, 1078, 4101, 4131 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 159, 557, 1073, 1154, 1412, 1896, 2146, 3037, 3902 |
| Bse118I | RCCGGY | 2 cut(s) | 1724, 2207 |
| Bse21I | CCTNAGG | 1 cut(s) | 4103 |
| Bse3DI | GCAATG | 8 cut(s) | 530, 1746, 1798, 2352, 2957, 3846, 3960, 4158 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2948, 3542, 3633 |
| BseBI | CCWGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| BseCI | ATCGAT | 2 cut(s) | 952, 4264 |
| BseDI | CCNNGG | 5 cut(s) | 6, 1685, 2233, 3663, 4249 |
| BseGI | GGATG | 8 cut(s) | 148, 337, 1053, 1522, 2629, 3218, 3257, 3382 |
| BseJI | GATNNNNATC | 3 cut(s) | 2948, 3542, 3633 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 159, 557, 1073, 1154, 1412, 1896, 2146, 3037, 3902 |
| BseMI | GCAATG | 8 cut(s) | 530, 1746, 1798, 2352, 2957, 3846, 3960, 4158 |
| BseMII | CTCAG | 8 cut(s) | 1220, 1649, 1923, 2268, 2999, 3255, 3401, 3710 |
| BseRI | GAGGAG | 2 cut(s) | 1137, 1675 |
| BseSI | GKGCMC | 2 cut(s) | 1381, 1954 |
| BseYI | CCCAGC | 3 cut(s) | 611, 1895, 3076 |
| BsgI | GTGCAG | 2 cut(s) | 3003, 3882 |
| Bsh1236I | CGCG | 3 cut(s) | 30, 83, 1596 |
| Bsh1285I | CGRYCG | 1 cut(s) | 64 |
| BshNI | GGYRCC | 1 cut(s) | 3181 |
| BshVI | ATCGAT | 2 cut(s) | 952, 4264 |
| BsiEI | CGRYCG | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1954, 3832 |
| BsiHKCI | CYCGRG | 5 cut(s) | 266, 1374, 3471, 3941, 4269 |
| BsiSI | CCGG | 3 cut(s) | 1725, 2208, 3222 |
| BsiWI | CGTACG | 1 cut(s) | 3796 |
| BslFI | GGGAC | 2 cut(s) | 2163, 2313 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 159, 557, 1073, 1154, 1412, 1896, 2146, 3037, 3902 |
| BsmBI | CGTCTC | 1 cut(s) | 3797 |
| BsmFI | GGGAC | 2 cut(s) | 2163, 2313 |
| BsmI | GAATGC | 4 cut(s) | 1425, 1851, 2372, 3081 |
| Bso31I | GGTCTC | 3 cut(s) | 523, 1209, 3046 |
| BsoBI | CYCGRG | 5 cut(s) | 266, 1374, 3471, 3941, 4269 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1381, 1954, 1965, 3832, 4012 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1932 |
| Bsp19I | CCATGG | 1 cut(s) | 2233 |
| BspACI | CCGC | 9 cut(s) | 44, 64, 354, 1196, 1384, 1811, 1890, 2331, 2865 |
| BspCNI | CTCAG | 8 cut(s) | 1219, 1650, 1924, 2269, 2998, 3254, 3402, 3709 |
| BspDI | ATCGAT | 2 cut(s) | 952, 4264 |
| BspFNI | CGCG | 3 cut(s) | 30, 83, 1596 |
| BspLI | GGNNCC | 5 cut(s) | 1723, 2138, 2206, 3183, 3603 |
| BspMAI | CTGCAG | 1 cut(s) | 3429 |
| BspMI | ACCTGC | 1 cut(s) | 2858 |
| BspPI | GGATC | 8 cut(s) | 369, 497, 661, 915, 2385, 2702, 2855, 3966 |
| BspQI | GCTCTTC | 2 cut(s) | 3723, 4017 |
| BspT107I | GGYRCC | 1 cut(s) | 3181 |
| BspTI | CTTAAG | 1 cut(s) | 2749 |
| BspTNI | GGTCTC | 3 cut(s) | 523, 1209, 3046 |
| BsrDI | GCAATG | 8 cut(s) | 530, 1746, 1798, 2352, 2957, 3846, 3960, 4158 |
| BsrFI | RCCGGY | 2 cut(s) | 1724, 2207 |
| BssAI | RCCGGY | 2 cut(s) | 1724, 2207 |
| BssECI | CCNNGG | 5 cut(s) | 6, 1685, 2233, 3663, 4249 |
| BssNAI | GTATAC | 1 cut(s) | 543 |
| BssSI | CACGAG | 3 cut(s) | 3107, 3330, 3651 |
| BssT1I | CCWWGG | 3 cut(s) | 2233, 3663, 4249 |
| Bst1107I | GTATAC | 1 cut(s) | 543 |
| Bst2BI | CACGAG | 3 cut(s) | 3107, 3330, 3651 |
| Bst2UI | CCWGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| Bst6I | CTCTTC | 4 cut(s) | 1305, 3723, 3866, 4017 |
| BstAFI | CTTAAG | 1 cut(s) | 2749 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2873, 3319, 3437, 3647 |
| BstBAI | YACGTR | 1 cut(s) | 582 |
| BstC8I | GCNNGC | 9 cut(s) | 662, 1755, 2834, 2919, 2978, 3015, 3324, 3429, 4024 |
| BstDSI | CCRYGG | 1 cut(s) | 2233 |
| BstEII | GGTNACC | 3 cut(s) | 1559, 2228, 2525 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1152, 3035 |
| BstF5I | GGATG | 8 cut(s) | 148, 337, 1053, 1522, 2629, 3218, 3257, 3382 |
| BstFNI | CGCG | 3 cut(s) | 30, 83, 1596 |
| BstH2I | RGCGCY | 2 cut(s) | 3361, 3480 |
| BstHHI | GCGC | 4 cut(s) | 30, 1596, 3360, 3479 |
| BstMCI | CGRYCG | 1 cut(s) | 64 |
| BstNI | CCWGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| BstNSI | RCATGY | 3 cut(s) | 576, 2915, 4026 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 594 |
| BstPI | GGTNACC | 3 cut(s) | 1559, 2228, 2525 |
| BstSCI | CCNGG | 6 cut(s) | 5, 400, 1364, 1685, 3572, 3895 |
| BstSFI | CTRYAG | 3 cut(s) | 524, 2697, 3425 |
| BstSLI | GKGCMC | 2 cut(s) | 1381, 1954 |
| BstUI | CGCG | 3 cut(s) | 30, 83, 1596 |
| BstV2I | GAAGAC | 1 cut(s) | 1833 |
| BstX2I | RGATCY | 4 cut(s) | 502, 2179, 2390, 2707 |
| BstYI | RGATCY | 4 cut(s) | 502, 2179, 2390, 2707 |
| BstZ17I | GTATAC | 1 cut(s) | 543 |
| Bsu15I | ATCGAT | 2 cut(s) | 952, 4264 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4103 |
| BsuI | GTATCC | 1 cut(s) | 178 |
| BsuTUI | ATCGAT | 2 cut(s) | 952, 4264 |
| BtgI | CCRYGG | 1 cut(s) | 2233 |
| BtgZI | GCGATG | 2 cut(s) | 45, 2375 |
| BtrI | CACGTC | 1 cut(s) | 3807 |
| BtsCI | GGATG | 8 cut(s) | 148, 337, 1053, 1522, 2629, 3218, 3257, 3382 |
| BtsI | GCAGTG | 3 cut(s) | 1379, 1873, 2829 |
| BveI | ACCTGC | 1 cut(s) | 2858 |
| Cac8I | GCNNGC | 9 cut(s) | 662, 1755, 2834, 2919, 2978, 3015, 3324, 3429, 4024 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2768, 3319 |
| CfoI | GCGC | 4 cut(s) | 30, 1596, 3360, 3479 |
| Cfr10I | RCCGGY | 2 cut(s) | 1724, 2207 |
| Cfr13I | GGNCC | 8 cut(s) | 860, 935, 944, 1551, 2127, 2576, 3139, 3170 |
| ClaI | ATCGAT | 2 cut(s) | 952, 4264 |
| CseI | GACGC | 1 cut(s) | 72 |
| CsiI | ACCWGGT | 1 cut(s) | 400 |
| DraI | TTTAAA | 2 cut(s) | 1122, 3684 |
| DraIII | CACNNNGTG | 1 cut(s) | 3930 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 764, 942 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 764, 942 |
| EaeI | YGGCCR | 3 cut(s) | 70, 161, 622 |
| Eam1104I | CTCTTC | 4 cut(s) | 1305, 3723, 3866, 4017 |
| EarI | CTCTTC | 4 cut(s) | 1305, 3723, 3866, 4017 |
| Ecl136II | GAGCTC | 1 cut(s) | 3830 |
| Eco130I | CCWWGG | 3 cut(s) | 2233, 3663, 4249 |
| Eco147I | AGGCCT | 3 cut(s) | 1141, 1645, 3013 |
| Eco24I | GRGCYC | 3 cut(s) | 1965, 3832, 4012 |
| Eco31I | GGTCTC | 3 cut(s) | 523, 1209, 3046 |
| Eco47I | GGWCC | 5 cut(s) | 935, 944, 2127, 2576, 3170 |
| Eco53kI | GAGCTC | 1 cut(s) | 3830 |
| Eco57I | CTGAAG | 6 cut(s) | 812, 834, 1335, 1836, 3612, 3873 |
| Eco72I | CACGTG | 1 cut(s) | 582 |
| Eco81I | CCTNAGG | 1 cut(s) | 4103 |
| Eco88I | CYCGRG | 5 cut(s) | 266, 1374, 3471, 3941, 4269 |
| Eco91I | GGTNACC | 3 cut(s) | 1559, 2228, 2525 |
| EcoICRI | GAGCTC | 1 cut(s) | 3830 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1152, 3035 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3170 |
| EcoO65I | GGTNACC | 3 cut(s) | 1559, 2228, 2525 |
| EcoRI | GAATTC | 1 cut(s) | 1703 |
| EcoRII | CCWGG | 6 cut(s) | 5, 400, 1364, 1685, 3572, 3895 |
| EcoT14I | CCWWGG | 3 cut(s) | 2233, 3663, 4249 |
| EcoT22I | ATGCAT | 2 cut(s) | 2372, 3154 |
| EcoT38I | GRGCYC | 3 cut(s) | 1965, 3832, 4012 |
| ErhI | CCWWGG | 3 cut(s) | 2233, 3663, 4249 |
| Esp3I | CGTCTC | 1 cut(s) | 3797 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3501, 3533, 3604, 3636 |
| FaqI | GGGAC | 2 cut(s) | 2163, 2313 |
| FauI | CCCGC | 6 cut(s) | 37, 347, 1189, 1377, 2338, 2872 |
| FbaI | TGATCA | 1 cut(s) | 3034 |
| FblI | GTMKAC | 3 cut(s) | 542, 922, 992 |
| FokI | GGATG | 8 cut(s) | 135, 344, 1060, 1529, 2636, 3205, 3244, 3389 |
| FriOI | GRGCYC | 3 cut(s) | 1965, 3832, 4012 |
| GlaI | GCGC | 4 cut(s) | 29, 1595, 3359, 3478 |
| GsaI | CCCAGC | 3 cut(s) | 615, 1899, 3080 |
| GsuI | CTGGAG | 6 cut(s) | 504, 1266, 2399, 2688, 3918, 4212 |
| HaeII | RGCGCY | 2 cut(s) | 3361, 3480 |
| HapII | CCGG | 3 cut(s) | 1725, 2208, 3222 |
| HgaI | GACGC | 1 cut(s) | 72 |
| HhaI | GCGC | 4 cut(s) | 30, 1596, 3360, 3479 |
| Hin6I | GCGC | 4 cut(s) | 28, 1594, 3358, 3477 |
| HinP1I | GCGC | 4 cut(s) | 28, 1594, 3358, 3477 |
| HincII | GTYRAC | 2 cut(s) | 757, 4071 |
| HindII | GTYRAC | 2 cut(s) | 757, 4071 |
| HindIII | AAGCTT | 5 cut(s) | 114, 1544, 1818, 3515, 3855 |
| HpaII | CCGG | 3 cut(s) | 1725, 2208, 3222 |
| Hpy99I | CGWCG | 3 cut(s) | 56, 59, 88 |
| HpyCH4IV | ACGT | 4 cut(s) | 126, 581, 2926, 3806 |
| HpySE526I | ACGT | 4 cut(s) | 126, 581, 2926, 3806 |
| HspAI | GCGC | 4 cut(s) | 28, 1594, 3358, 3477 |
| Ksp22I | TGATCA | 1 cut(s) | 3034 |
| LguI | GCTCTTC | 2 cut(s) | 3723, 4017 |
| MabI | ACCWGGT | 1 cut(s) | 400 |
| MaeII | ACGT | 4 cut(s) | 126, 581, 2926, 3806 |
| MfeI | CAATTG | 1 cut(s) | 3231 |
| MflI | RGATCY | 4 cut(s) | 502, 2179, 2390, 2707 |
| MhlI | GDGCHC | 5 cut(s) | 1381, 1954, 1965, 3832, 4012 |
| MlsI | TGGCCA | 2 cut(s) | 163, 624 |
| MluNI | TGGCCA | 2 cut(s) | 163, 624 |
| MlyI | GAGTC | 5 cut(s) | 1529, 2058, 2288, 2657, 2731 |
| MmeI | TCCRAC | 5 cut(s) | 656, 1597, 1822, 3138, 3967 |
| Mox20I | TGGCCA | 2 cut(s) | 163, 624 |
| Mph1103I | ATGCAT | 2 cut(s) | 2372, 3154 |
| MroXI | GAANNNNTTC | 2 cut(s) | 420, 3517 |
| MscI | TGGCCA | 2 cut(s) | 163, 624 |
| MseI | TTAA | 8 cut(s) | 458, 741, 1121, 1343, 2750, 2880, 3683, 4202 |
| MslI | CAYNNNNRTG | 2 cut(s) | 630, 2892 |
| Msp20I | TGGCCA | 2 cut(s) | 163, 624 |
| MspA1I | CMGCKG | 4 cut(s) | 230, 1892, 2333, 3076 |
| MspCI | CTTAAG | 1 cut(s) | 2749 |
| MspI | CCGG | 3 cut(s) | 1725, 2208, 3222 |
| MspR9I | CCNGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| MunI | CAATTG | 1 cut(s) | 3231 |
| Mva1269I | GAATGC | 4 cut(s) | 1425, 1851, 2372, 3081 |
| MvaI | CCWGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| MvnI | CGCG | 3 cut(s) | 30, 83, 1596 |
| NcoI | CCATGG | 1 cut(s) | 2233 |
| NlaIV | GGNNCC | 5 cut(s) | 1723, 2138, 2206, 3183, 3603 |
| NmuCI | GTSAC | 8 cut(s) | 34, 131, 1129, 1559, 2228, 2437, 2525, 3236 |
| NsiI | ATGCAT | 2 cut(s) | 2372, 3154 |
| NspI | RCATGY | 3 cut(s) | 576, 2915, 4026 |
| PaeI | GCATGC | 1 cut(s) | 4026 |
| PaeR7I | CTCGAG | 3 cut(s) | 3471, 3941, 4269 |
| PaqCI | CACCTGC | 1 cut(s) | 2858 |
| PceI | AGGCCT | 3 cut(s) | 1141, 1645, 3013 |
| PciI | ACATGT | 1 cut(s) | 572 |
| PciSI | GCTCTTC | 2 cut(s) | 3723, 4017 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 27, 57, 4117 |
| PctI | GAATGC | 4 cut(s) | 1425, 1851, 2372, 3081 |
| PdmI | GAANNNNTTC | 2 cut(s) | 420, 3517 |
| Pfl23II | CGTACG | 1 cut(s) | 3796 |
| PflFI | GACNNNGTC | 2 cut(s) | 17, 339 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 159, 557 |
| PfoI | TCCNGGA | 3 cut(s) | 1364, 3572, 3895 |
| PleI | GAGTC | 5 cut(s) | 1528, 2058, 2287, 2656, 2730 |
| PmaCI | CACGTG | 1 cut(s) | 582 |
| PmlI | CACGTG | 1 cut(s) | 582 |
| PpsI | GAGTC | 5 cut(s) | 1528, 2058, 2287, 2656, 2730 |
| Ppu21I | YACGTR | 1 cut(s) | 582 |
| PpuMI | RGGWCCY | 1 cut(s) | 3170 |
| PscI | ACATGT | 1 cut(s) | 572 |
| PshAI | GACNNNNGTC | 1 cut(s) | 594 |
| PsiI | TTATAA | 3 cut(s) | 1787, 2021, 2643 |
| Psp124BI | GAGCTC | 1 cut(s) | 3832 |
| Psp5II | RGGWCCY | 1 cut(s) | 3170 |
| Psp6I | CCWGG | 6 cut(s) | 5, 400, 1364, 1685, 3572, 3895 |
| PspCI | CACGTG | 1 cut(s) | 582 |
| PspEI | GGTNACC | 3 cut(s) | 1559, 2228, 2525 |
| PspFI | CCCAGC | 3 cut(s) | 611, 1895, 3076 |
| PspGI | CCWGG | 6 cut(s) | 5, 400, 1364, 1685, 3572, 3895 |
| PspLI | CGTACG | 1 cut(s) | 3796 |
| PspN4I | GGNNCC | 5 cut(s) | 1723, 2138, 2206, 3183, 3603 |
| PspPI | GGNCC | 8 cut(s) | 860, 935, 944, 1551, 2127, 2576, 3139, 3170 |
| PspPPI | RGGWCCY | 1 cut(s) | 3170 |
| PspXI | VCTCGAGB | 1 cut(s) | 3471 |
| PstI | CTGCAG | 1 cut(s) | 3429 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2768, 3319 |
| PsuI | RGATCY | 4 cut(s) | 502, 2179, 2390, 2707 |
| PsyI | GACNNNGTC | 2 cut(s) | 17, 339 |
| PvuII | CAGCTG | 2 cut(s) | 230, 3076 |
| RseI | CAYNNNNRTG | 2 cut(s) | 630, 2892 |
| SacI | GAGCTC | 1 cut(s) | 3832 |
| SapI | GCTCTTC | 2 cut(s) | 3723, 4017 |
| SaqAI | TTAA | 8 cut(s) | 458, 741, 1121, 1343, 2750, 2880, 3683, 4202 |
| Sau96I | GGNCC | 8 cut(s) | 860, 935, 944, 1551, 2127, 2576, 3139, 3170 |
| SbfI | CCTGCAGG | 1 cut(s) | 3429 |
| ScaI | AGTACT | 3 cut(s) | 1348, 1612, 4137 |
| SchI | GAGTC | 5 cut(s) | 1529, 2058, 2288, 2657, 2731 |
| ScrFI | CCNGG | 6 cut(s) | 7, 402, 1366, 1687, 3574, 3897 |
| SdaI | CCTGCAGG | 1 cut(s) | 3429 |
| SduI | GDGCHC | 5 cut(s) | 1381, 1954, 1965, 3832, 4012 |
| SexAI | ACCWGGT | 1 cut(s) | 400 |
| SfcI | CTRYAG | 3 cut(s) | 524, 2697, 3425 |
| Sfr274I | CTCGAG | 3 cut(s) | 3471, 3941, 4269 |
| SinI | GGWCC | 5 cut(s) | 935, 944, 2127, 2576, 3170 |
| SlaI | CTCGAG | 3 cut(s) | 3471, 3941, 4269 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 630, 2892 |
| SmlI | CTYRAG | 9 cut(s) | 1856, 2072, 2266, 2684, 2749, 3471, 3557, 3941, 4269 |
| SmoI | CTYRAG | 9 cut(s) | 1856, 2072, 2266, 2684, 2749, 3471, 3557, 3941, 4269 |
| SpeI | ACTAGT | 1 cut(s) | 4181 |
| SphI | GCATGC | 1 cut(s) | 4026 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3429 |
| SseBI | AGGCCT | 3 cut(s) | 1141, 1645, 3013 |
| SsiI | CCGC | 9 cut(s) | 44, 64, 354, 1196, 1384, 1811, 1890, 2331, 2865 |
| SspI | AATATT | 1 cut(s) | 3275 |
| SstI | GAGCTC | 1 cut(s) | 3832 |
| StuI | AGGCCT | 3 cut(s) | 1141, 1645, 3013 |
| StyD4I | CCNGG | 6 cut(s) | 5, 400, 1364, 1685, 3572, 3895 |
| StyI | CCWWGG | 3 cut(s) | 2233, 3663, 4249 |
| TaiI | ACGT | 4 cut(s) | 129, 584, 2929, 3809 |
| TaqII | GACCGA | 1 cut(s) | 3111 |
| TatI | WGTACW | 6 cut(s) | 584, 1346, 1468, 1610, 1768, 4135 |
| TauI | GCSGC | 1 cut(s) | 1814 |
| Tru1I | TTAA | 8 cut(s) | 458, 741, 1121, 1343, 2750, 2880, 3683, 4202 |
| Tru9I | TTAA | 8 cut(s) | 458, 741, 1121, 1343, 2750, 2880, 3683, 4202 |
| TseFI | GTSAC | 8 cut(s) | 34, 131, 1129, 1559, 2228, 2437, 2525, 3236 |
| Tsp45I | GTSAC | 8 cut(s) | 34, 131, 1129, 1559, 2228, 2437, 2525, 3236 |
| TspGWI | ACGGA | 1 cut(s) | 823 |
| Tth111I | GACNNNGTC | 2 cut(s) | 17, 339 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 159, 557 |
| Vha464I | CTTAAG | 1 cut(s) | 2749 |
| VneI | GTGCAC | 1 cut(s) | 1950 |
| VpaK11BI | GGWCC | 5 cut(s) | 935, 944, 2127, 2576, 3170 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1152, 3035 |
| XapI | RAATTY | 3 cut(s) | 244, 1703, 2248 |
| XbaI | TCTAGA | 3 cut(s) | 3190, 3388, 3745 |
| XceI | RCATGY | 3 cut(s) | 576, 2915, 4026 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 769, 3729 |
| XhoI | CTCGAG | 3 cut(s) | 3471, 3941, 4269 |
| XmiI | GTMKAC | 3 cut(s) | 542, 922, 992 |
| XmnI | GAANNNNTTC | 2 cut(s) | 420, 3517 |
| ZrmI | AGTACT | 3 cut(s) | 1348, 1612, 4137 |
| Zsp2I | ATGCAT | 2 cut(s) | 2372, 3154 |