AT1G15940

mitotic sister chromatid cohesion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001637
Physical Location & Seq
Forward (+)
5473359 .. 5478405
5047 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15940.1

Sequence Viewer

Length: 2973 bp
ATGGGTCCTCTTGTCGAAGCGACTGAGTTCTCGAAAGAACAAGCACTCACCGACGCTGCAGAAAATCTCCTTAAACCTCATTTCTCAACTGATGCGACTCTCAGTCTTCTCGAGGTAATGGAGTCTCTGCTCGCCACTGTCGAGCAAGATCTTTCTTCATCAGTACAAAAGGCCCTACATCCACCAATGAGGGCTTTGGTATCCGCTGATCTTTTGAGAAACCCTGATTCTGATGTTAGGGTTTCTGTTGTCTCTTGCTTGACCGAAATTATGAGGATTACTGCTCCTGAGGCCCCTTACAACGATGAGCAAATGAAGGACATCTTCCAGGTGACAATAGAAGCCTTTGAAAAACTTGCTGATGCTTCTAGTCGCAGTTACAGGAAAGCCGAGGTTATTCTTGAGACTGTTGCAAAGGTTAGATCATCCTTGGTTATGTTGGACTTGGAGTGCGACGATCTTGTCCTAGAAATGTTTCAACGGTTCTTGAAAATCATAAGGCCGGATCATCCTCAACTGGTGCTTGTCTCAATGGAAACGATTATGATCACAGTTATAGATGAAAGTGAAGAAGTACCCATGGACTTGCTCGAGATTCTCTTGACTACTGTCAAAAAGGACAGTCAGGATGTCTCACCAGCTGCTTTGACGCTTGTGGAGAAGGTTCTCAGTAGTTGCACCTGTAAGCTTCAGCCGTGCATCATGGAAGCTTTGAAGTCCTCAGGGACCAGCTTGGATATGTATTCTCCTGTAGTTTCATCAATATGCCAAAGTGAATTTGCTACTACTCAAGCACACAATGATGTTAAGCCCAAAGATAATGAGGCAGATGAAAAGATATCAGAAGGACAAGTAGTTCCAAGTGATTCATTGGAGGACAAATTGAATTTAGGGCTTTCTCGCAAAGGAACTAGATCCAAGAGAAGTGCTAGAGGTGGAACTCGTCGAGCGAATGGAGATGAAAAAGTAATAACTGCAAATGAAGGGCTGTCTGAAAGTACAGATGCAGAGACTGCATCAGGGTCTACAAGGAAGAGAGGGTGGAAACCAAAATCTCTGATGAATCCTGAGGAAGGCTATTCATTTAAGACGTCTTCAAGCAAGAAGGTGCAGGAAAAAGAACTTGGGGATTCATCACTTGGAAAGGTGGCTGCCAAGAAAGTGCCTTTGCCTTCTAAAGTTGGTCAAACGAATCAGTCTGTTGTTATTTCTCTCTCATCCTCTGGTAGGGCTAGGACAGGGTCACGTAAACGAAGCCGAACTAAGATGGAAGAGACGGATCATGATGTAAGTTCTGTTGCGACACAACCAGCAAAGAAACAGACTGTGAAGAAAACTAATCCTGCAAAAGAAGATTTGACGAAGTCTAATGTTAAAAAACATGAAGATGGCATTAAGACTGGCAAGTCAAGTAAAAAGGAGAAAGCAGATAATGGTTTAGCAAAAACATCTGCAAAGAAGCCACTTGCAGAAACTATGATGGTAAAGCCCAGTGGAAAAAAGTTAGTCCATTCAGATGCTAAGAAAAAGAATTCAGAAGGTGCAAGCATGGATACGCCTATTCCCCAATCATCAAAGAGCAAGAAGAAGGATTCTCGTGCAACGACGCCTGCAACCAAAAAGTCTGAACAAGCTCCTAAGAGCCATCCCAAGATGAAACGGATAGCAGGAGAGGAAGTGGAGTCCAATACAAACGAGCTTGGTGAAGAACTCGTTGGTAAGAGAGTTAATGTCTGGTGGCCACTCGACAAGAAGTTTTATGAAGGTGTCATAAAATCTTATTGTAGAGTTAAGAAGATGCATCAAGTAACATATTCTGATGGCGATGTTGAAGAGCTTAATCTGAAAAAAGAACGTTTTAAGATAATCGAGGATAAATCTTCAGCCAGTGAGGATAAGGAAGATGATCTGCTTGAGTCTACTCCTTTATCTGCCTTTATACAAAGGGAGAAATCCAAGAAGAGGAAAATTGTGTCTAAGAATGTGGAACCGAGTAGTTCTCCAGAAGTCAGATCCTCTATGCAAACAATGAAGAAGAAAGACTCTGTAACAGACTCCATTAAGCAAACAAAAAGAACCAAAGGTGCACTGAAGGCTGTAAGCAATGAACCAGAAAGCACTACAGGGAAAAATCTTAAATCCTTGAAAAAGCTGAATGGTGAACCTGATAAAACAAGAGGCAGAACTGGCAAAAAGCAGAAGGTGACTCAAGCTATGCACCGGAAAATCGAAAAAGATTGTGATGAGCAGGAAGACCTCGAAACCAAAGATGAAGAAGACAGTCTGAAATTGGGGAAAGAATCAGATGCAGAGCCTGATCGTATGGAAGATCACCAAGAATTGCCTGAAAATCACAATGTAGAAACCAAAACTGATGGAGAAGAGCAGGAGGCAGCGAAAGAGCCAACGGCAGAGTCTAAAACTAATGGAGAGGAGCCAAATGCAGAACCCGAAACTGATGGAAAAGAGCATAAATCATTGAAGGAGCCAAATGCAGAGCCCAAATCTGATGGAGAAGAGCAGGAGGCAGCAAAAGAGCCAAATGCTGAGCTCAAAACTGATGGAGAAAATCAGGAGGCAGCAAAAGAGCTAACTGCAGAACGCAAAACTGATGAGGAAGAGCACAAGGTAGCTGATGAGGTAGAGCAAAAGTCACAGAAAGAGACAAATGTAGAACCGGAAGCTGAGGGAGAAGAGCAAAAGTCAGTGGAAGAGCCAAATGCAGAACCCAAGACCAAGGTAGAAGAGAAAGAGTCAGCAAAAGAGCAAACTGCAGACACAAAATTGATTGAGAAGGAGGATATGTCTAAGACAAAGGGAGAAGAGATTGATAAAGAAACATATTCAAGCATCCCTGAGACTGGTAAAGTAGGAAACGAAGCTGAAGAAGATGATCAGAGAGTGATTAAGGAACTGGAAGAAGAGTCTGACAAGGCAGAAGTCAGTACTACGGTGCTTGAGGTTGATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LBR_tudor

Protein Analysis

990

Amino Acids

109.59

Weight (kDa)

5.3

Isoelectric Point (pI)

46.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 34 - 235 5.1e-48 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 461, 1405
AatII GACGTC 1 cut(s) 1094
AccI GTMKAC 2 cut(s) 1025, 1919
AciI CCGC 1 cut(s) 204
AclI AACGTT 1 cut(s) 1855
AclWI GGATC 5 cut(s) 513, 909, 1287, 2007, 2960
AcoI YGGCCR 1 cut(s) 1739
AcsI RAATTY 3 cut(s) 776, 886, 1531
AcuI CTGAAG 4 cut(s) 674, 1866, 2111, 2904
AcyI GRCGYC 2 cut(s) 1091, 1607
AfaI GTAC 4 cut(s) 165, 576, 1000, 2947
AfiI CCNNNNNNNGG 4 cut(s) 1073, 1227, 1962, 2861
AhdI GACNNNNNGTC 1 cut(s) 102
AjnI CCWGG 1 cut(s) 327
AjuI GAANNNNNNNTTGG 4 cut(s) 1107, 1139, 1698, 1730
AloI GAACNNNNNNTCC 2 cut(s) 840, 872
Alw21I GWGCWC 3 cut(s) 2089, 2553, 2625
Alw26I GTCTC 9 cut(s) 129, 256, 398, 532, 637, 1004, 1268, 2657, 2852
Alw44I GTGCAC 1 cut(s) 2085
AlwI GGATC 5 cut(s) 513, 909, 1287, 2007, 2960
AlwNI CAGNNNCTG 2 cut(s) 1013, 2315
Ama87I CYCGRG 2 cut(s) 110, 590
AoxI GGCC 4 cut(s) 171, 291, 500, 1739
ApaLI GTGCAC 1 cut(s) 2085
ApeKI GCWGC 6 cut(s) 56, 641, 1151, 2393, 2528, 2579
ApoI RAATTY 3 cut(s) 776, 886, 1531
Asp700I GAANNNNTTC 1 cut(s) 474
AspS9I GGNCC 4 cut(s) 5, 172, 292, 726
AsuHPI GGTGA 7 cut(s) 40, 343, 627, 1715, 2171, 2215, 2324
AvaI CYCGRG 2 cut(s) 110, 590
AvaII GGWCC 2 cut(s) 5, 726
AxyI CCTNAGG 3 cut(s) 288, 721, 1068
BaeGI GKGCMC 1 cut(s) 2089
BalI TGGCCA 1 cut(s) 1741
BanII GRGCYC 2 cut(s) 2502, 2553
BauI CACGAG 1 cut(s) 1596
BbsI GAAGAC 4 cut(s) 98, 1086, 2259, 2283
Bbv12I GWGCWC 3 cut(s) 2089, 2553, 2625
BbvCI CCTCAGC 1 cut(s) 2685
BbvI GCAGC 6 cut(s) 43, 628, 1138, 2405, 2540, 2591
BccI CCATC 9 cut(s) 1261, 1382, 1474, 1653, 1814, 2369, 2453, 2504, 2555
BceAI ACGGC 2 cut(s) 679, 2424
BciT130I CCWGG 1 cut(s) 329
BciVI GTATCC 2 cut(s) 211, 1546
BclI TGATCA 2 cut(s) 546, 2893
BcoDI GTCTC 9 cut(s) 129, 256, 398, 532, 637, 1004, 1268, 2657, 2852
BfaI CTAG 5 cut(s) 369, 467, 912, 930, 1233
BfmI CTRYAG 5 cut(s) 57, 750, 2121, 2595, 2772
BfuI GTATCC 2 cut(s) 211, 1546
BglII AGATCT 1 cut(s) 148
BisI GCNGC 6 cut(s) 57, 642, 1152, 2394, 2529, 2580
BlpI GCTNAGC 1 cut(s) 2547
BlsI GCNGC 6 cut(s) 58, 643, 1153, 2395, 2530, 2581
BmcAI AGTACT 1 cut(s) 2947
Bme1390I CCNGG 1 cut(s) 329
Bme18I GGWCC 2 cut(s) 5, 726
BmeRI GACNNNNNGTC 1 cut(s) 102
BmeT110I CYCGRG 2 cut(s) 110, 590
BmgT120I GGNCC 4 cut(s) 5, 172, 292, 726
BmiI GGNNCC 6 cut(s) 6, 294, 727, 1989, 2436, 2487
BmrFI CCNGG 1 cut(s) 329
BmrI ACTGGG 1 cut(s) 1485
BmuI ACTGGG 1 cut(s) 1485
BoxI GACNNNNGTC 1 cut(s) 608
BpiI GAAGAC 4 cut(s) 98, 1086, 2259, 2283
BplI GAGNNNNNCTC 2 cut(s) 1984, 2016
BpmI CTGGAG 1 cut(s) 1986
Bpu10I CCTNAGC 1 cut(s) 2685
Bpu1102I GCTNAGC 1 cut(s) 2547
BpuEI CTTGAG 4 cut(s) 422, 774, 1934, 2193
BsaAI YACGTR 1 cut(s) 1247
BsaBI GATNNNNATC 1 cut(s) 545
BsaHI GRCGYC 2 cut(s) 1091, 1607
BsaJI CCNNGG 4 cut(s) 390, 429, 579, 2736
BsaWI WCCGGW 2 cut(s) 2220, 2677
BsaXI ACNNNNNCTCC 4 cut(s) 1662, 1692, 2789, 2819
Bsc4I CCNNNNNNNGG 4 cut(s) 1073, 1227, 1962, 2861
Bse1I ACTGG 7 cut(s) 522, 1405, 1491, 1887, 2191, 2866, 2919
Bse21I CCTNAGG 3 cut(s) 288, 721, 1068
Bse3DI GCAATG 1 cut(s) 2110
Bse8I GATNNNNATC 1 cut(s) 545
BseBI CCWGG 1 cut(s) 329
BseDI CCNNGG 4 cut(s) 390, 429, 579, 2736
BseGI GGATG 7 cut(s) 178, 425, 508, 634, 1217, 1645, 2850
BseJI GATNNNNATC 1 cut(s) 545
BseLI CCNNNNNNNGG 4 cut(s) 1073, 1227, 1962, 2861
BseMI GCAATG 1 cut(s) 2110
BseMII CTCAG 9 cut(s) 15, 115, 279, 682, 735, 1059, 2538, 2676, 2847
BseNI ACTGG 7 cut(s) 522, 1405, 1491, 1887, 2191, 2866, 2919
BseRI GAGGAG 1 cut(s) 2447
BseSI GKGCMC 1 cut(s) 2089
BseXI GCAGC 6 cut(s) 43, 628, 1138, 2405, 2540, 2591
BsgI GTGCAG 1 cut(s) 1130
BshFI GGCC 4 cut(s) 173, 293, 502, 1741
BsiHKAI GWGCWC 3 cut(s) 2089, 2553, 2625
BsiHKCI CYCGRG 2 cut(s) 110, 590
BsiSI CCGG 3 cut(s) 503, 2221, 2678
BslFI GGGAC 1 cut(s) 739
BslI CCNNNNNNNGG 4 cut(s) 1073, 1227, 1962, 2861
BsmAI GTCTC 9 cut(s) 129, 256, 398, 532, 637, 1004, 1268, 2657, 2852
BsmBI CGTCTC 1 cut(s) 1268
BsmFI GGGAC 1 cut(s) 739
BsnI GGCC 4 cut(s) 173, 293, 502, 1741
BsoBI CYCGRG 2 cut(s) 110, 590
Bsp1286I GDGCHC 4 cut(s) 2089, 2502, 2553, 2625
Bsp1720I GCTNAGC 1 cut(s) 2547
Bsp19I CCATGG 1 cut(s) 579
BspACI CCGC 1 cut(s) 204
BspANI GGCC 4 cut(s) 173, 293, 502, 1741
BspCNI CTCAG 9 cut(s) 16, 114, 280, 681, 734, 1060, 2539, 2677, 2848
BspHI TCATGA 1 cut(s) 1282
BspLI GGNNCC 6 cut(s) 6, 294, 727, 1989, 2436, 2487
BspMAI CTGCAG 3 cut(s) 61, 2599, 2776
BspPI GGATC 5 cut(s) 513, 909, 1287, 2007, 2960
BspQI GCTCTTC 6 cut(s) 1827, 2376, 2511, 2613, 2688, 2706
BsrDI GCAATG 1 cut(s) 2110
BsrI ACTGG 7 cut(s) 522, 1405, 1491, 1887, 2191, 2866, 2919
BssECI CCNNGG 4 cut(s) 390, 429, 579, 2736
BssNI GRCGYC 2 cut(s) 1091, 1607
BssSI CACGAG 1 cut(s) 1596
BssT1I CCWWGG 3 cut(s) 429, 579, 2736
Bst2BI CACGAG 1 cut(s) 1596
Bst2UI CCWGG 1 cut(s) 329
Bst4CI ACNGT 9 cut(s) 139, 409, 483, 553, 610, 623, 1327, 2282, 2953
BstACI GRCGYC 2 cut(s) 1091, 1607
BstAPI GCANNNNNTGC 1 cut(s) 1013
BstBAI YACGTR 1 cut(s) 1247
BstC8I GCNNGC 3 cut(s) 132, 1546, 1611
BstDSI CCRYGG 1 cut(s) 579
BstENI CCTNNNNNAGG 2 cut(s) 1071, 1225
BstF5I GGATG 7 cut(s) 178, 425, 508, 634, 1217, 1645, 2850
BstMAI GTCTC 9 cut(s) 129, 256, 398, 532, 637, 1004, 1268, 2657, 2852
BstMWI GCNNNNNNNGC 4 cut(s) 290, 1013, 2093, 2187
BstNI CCWGG 1 cut(s) 329
BstPAI GACNNNNGTC 1 cut(s) 608
BstSCI CCNGG 1 cut(s) 327
BstSFI CTRYAG 5 cut(s) 57, 750, 2121, 2595, 2772
BstSLI GKGCMC 1 cut(s) 2089
BstV1I GCAGC 6 cut(s) 43, 628, 1138, 2405, 2540, 2591
BstV2I GAAGAC 4 cut(s) 98, 1086, 2259, 2283
BstX2I RGATCY 3 cut(s) 148, 914, 2012
BstYI RGATCY 3 cut(s) 148, 914, 2012
Bsu36I CCTNAGG 3 cut(s) 288, 721, 1068
BsuI GTATCC 2 cut(s) 211, 1546
BsuRI GGCC 4 cut(s) 173, 293, 502, 1741
BtgI CCRYGG 1 cut(s) 579
BtgZI GCGATG 1 cut(s) 1839
BtsCI GGATG 7 cut(s) 178, 425, 508, 634, 1217, 1645, 2850
BtsIMutI CAGTG 5 cut(s) 135, 1498, 1894, 2087, 2712
Cac8I GCNNGC 3 cut(s) 132, 1546, 1611
CaiI CAGNNNCTG 2 cut(s) 1013, 2315
CciI TCATGA 1 cut(s) 1282
Cfr13I GGNCC 4 cut(s) 5, 172, 292, 726
CseI GACGC 3 cut(s) 62, 658, 1615
Csp6I GTAC 4 cut(s) 164, 575, 999, 2946
CviAII CATG 6 cut(s) 580, 703, 1283, 1382, 1549, 2970
CviQI GTAC 4 cut(s) 164, 575, 999, 2946
DrdI GACNNNNNNGTC 2 cut(s) 461, 1405
DriI GACNNNNNGTC 1 cut(s) 102
DseDI GACNNNNNNGTC 2 cut(s) 461, 1405
EaeI YGGCCR 1 cut(s) 1739
Eam1105I GACNNNNNGTC 1 cut(s) 102
Ecl136II GAGCTC 1 cut(s) 2551
Eco130I CCWWGG 3 cut(s) 429, 579, 2736
Eco24I GRGCYC 2 cut(s) 2502, 2553
Eco32I GATATC 1 cut(s) 840
Eco47I GGWCC 2 cut(s) 5, 726
Eco53kI GAGCTC 1 cut(s) 2551
Eco57I CTGAAG 4 cut(s) 674, 1866, 2111, 2904
Eco81I CCTNAGG 3 cut(s) 288, 721, 1068
Eco88I CYCGRG 2 cut(s) 110, 590
EcoICRI GAGCTC 1 cut(s) 2551
EcoNI CCTNNNNNAGG 2 cut(s) 1071, 1225
EcoO109I RGGNCCY 3 cut(s) 5, 172, 292
EcoRI GAATTC 1 cut(s) 1531
EcoRII CCWGG 1 cut(s) 327
EcoRV GATATC 1 cut(s) 840
EcoT14I CCWWGG 3 cut(s) 429, 579, 2736
EcoT22I ATGCAT 1 cut(s) 1803
EcoT38I GRGCYC 2 cut(s) 2502, 2553
ErhI CCWWGG 3 cut(s) 429, 579, 2736
Esp3I CGTCTC 1 cut(s) 1268
FaeI CATG 6 cut(s) 583, 706, 1286, 1385, 1552, 2973
FalI AAGNNNNNCTT 2 cut(s) 308, 340
FaqI GGGAC 1 cut(s) 739
FatI CATG 6 cut(s) 579, 702, 1282, 1381, 1548, 2969
FbaI TGATCA 2 cut(s) 546, 2893
FblI GTMKAC 2 cut(s) 1025, 1919
Fnu4HI GCNGC 6 cut(s) 57, 642, 1152, 2394, 2529, 2580
FokI GGATG 7 cut(s) 165, 412, 495, 641, 1204, 1632, 2837
FriOI GRGCYC 2 cut(s) 2502, 2553
Fsp4HI GCNGC 6 cut(s) 57, 642, 1152, 2394, 2529, 2580
FspBI CTAG 5 cut(s) 369, 467, 912, 930, 1233
GluI GCNGC 6 cut(s) 57, 642, 1152, 2394, 2529, 2580
GsuI CTGGAG 1 cut(s) 1986
HaeIII GGCC 4 cut(s) 173, 293, 502, 1741
HapII CCGG 3 cut(s) 503, 2221, 2678
HgaI GACGC 3 cut(s) 62, 658, 1615
Hin1I GRCGYC 2 cut(s) 1091, 1607
Hin1II CATG 6 cut(s) 583, 706, 1286, 1385, 1552, 2973
HindIII AAGCTT 2 cut(s) 686, 708
HpaII CCGG 3 cut(s) 503, 2221, 2678
HphI GGTGA 7 cut(s) 40, 343, 627, 1715, 2171, 2215, 2324
Hpy166II GTNNAC 5 cut(s) 1026, 1250, 1920, 2087, 2162
Hpy8I GTNNAC 5 cut(s) 1026, 1250, 1920, 2087, 2162
Hpy99I CGWCG 4 cut(s) 56, 458, 948, 1609
HpyCH4III ACNGT 9 cut(s) 139, 409, 483, 553, 610, 623, 1327, 2282, 2953
HpyCH4IV ACGT 3 cut(s) 1091, 1246, 1855
HpyF10VI GCNNNNNNNGC 4 cut(s) 290, 1013, 2093, 2187
HpySE526I ACGT 3 cut(s) 1091, 1246, 1855
Hsp92I GRCGYC 2 cut(s) 1091, 1607
Hsp92II CATG 6 cut(s) 583, 706, 1286, 1385, 1552, 2973
Ksp22I TGATCA 2 cut(s) 546, 2893
LguI GCTCTTC 6 cut(s) 1827, 2376, 2511, 2613, 2688, 2706
LmnI GCTCC 4 cut(s) 289, 1639, 2434, 2485
Lsp1109I GCAGC 6 cut(s) 43, 628, 1138, 2405, 2540, 2591
MaeI CTAG 5 cut(s) 369, 467, 912, 930, 1233
MaeII ACGT 3 cut(s) 1091, 1246, 1855
MaeIII GTNAC 7 cut(s) 331, 377, 1242, 1807, 2047, 2203, 2652
MflI RGATCY 3 cut(s) 148, 914, 2012
MhlI GDGCHC 4 cut(s) 2089, 2502, 2553, 2625
MlsI TGGCCA 1 cut(s) 1741
MluCI AATT 9 cut(s) 267, 776, 881, 886, 1531, 1968, 2288, 2339, 2783
MluNI TGGCCA 1 cut(s) 1741
MmeI TCCRAC 1 cut(s) 420
Mox20I TGGCCA 1 cut(s) 1741
Mph1103I ATGCAT 1 cut(s) 1803
MroXI GAANNNNTTC 1 cut(s) 474
MscI TGGCCA 1 cut(s) 1741
MslI CAYNNNNRTG 4 cut(s) 763, 801, 1386, 1515
Msp20I TGGCCA 1 cut(s) 1741
MspA1I CMGCKG 2 cut(s) 206, 641
MspI CCGG 3 cut(s) 503, 2221, 2678
MspR9I CCNGG 1 cut(s) 329
MvaI CCWGG 1 cut(s) 329
MwoI GCNNNNNNNGC 4 cut(s) 290, 1013, 2093, 2187
NcoI CCATGG 1 cut(s) 579
NlaIII CATG 6 cut(s) 583, 706, 1286, 1385, 1552, 2973
NlaIV GGNNCC 6 cut(s) 6, 294, 727, 1989, 2436, 2487
NmeAIII GCCGAG 1 cut(s) 415
NmuCI GTSAC 4 cut(s) 331, 1242, 2203, 2652
NsiI ATGCAT 1 cut(s) 1803
PaeR7I CTCGAG 2 cut(s) 110, 590
PagI TCATGA 1 cut(s) 1282
PciSI GCTCTTC 6 cut(s) 1827, 2376, 2511, 2613, 2688, 2706
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PdmI GAANNNNTTC 1 cut(s) 474
PfeI GAWTC 8 cut(s) 227, 595, 866, 1063, 1130, 1192, 1592, 2300
PflFI GACNNNGTC 2 cut(s) 1240, 1363
PkrI GCNGC 6 cut(s) 58, 643, 1153, 2395, 2530, 2581
Ppu21I YACGTR 1 cut(s) 1247
PpuMI RGGWCCY 1 cut(s) 5
PshAI GACNNNNGTC 1 cut(s) 608
Psp124BI GAGCTC 1 cut(s) 2553
Psp1406I AACGTT 1 cut(s) 1855
Psp5II RGGWCCY 1 cut(s) 5
Psp6I CCWGG 1 cut(s) 327
PspGI CCWGG 1 cut(s) 327
PspN4I GGNNCC 6 cut(s) 6, 294, 727, 1989, 2436, 2487
PspPI GGNCC 4 cut(s) 5, 172, 292, 726
PspPPI RGGWCCY 1 cut(s) 5
PstI CTGCAG 3 cut(s) 61, 2599, 2776
PstNI CAGNNNCTG 2 cut(s) 1013, 2315
PsuI RGATCY 3 cut(s) 148, 914, 2012
PsyI GACNNNGTC 2 cut(s) 1240, 1363
PvuII CAGCTG 1 cut(s) 641
RsaI GTAC 4 cut(s) 165, 576, 1000, 2947
RsaNI GTAC 4 cut(s) 164, 575, 999, 2946
RseI CAYNNNNRTG 4 cut(s) 763, 801, 1386, 1515
SacI GAGCTC 1 cut(s) 2553
SapI GCTCTTC 6 cut(s) 1827, 2376, 2511, 2613, 2688, 2706
SatI GCNGC 6 cut(s) 57, 642, 1152, 2394, 2529, 2580
Sau96I GGNCC 4 cut(s) 5, 172, 292, 726
ScaI AGTACT 1 cut(s) 2947
ScrFI CCNGG 1 cut(s) 329
SduI GDGCHC 4 cut(s) 2089, 2502, 2553, 2625
SfcI CTRYAG 5 cut(s) 57, 750, 2121, 2595, 2772
Sfr274I CTCGAG 2 cut(s) 110, 590
SinI GGWCC 2 cut(s) 5, 726
SlaI CTCGAG 2 cut(s) 110, 590
SmiMI CAYNNNNRTG 4 cut(s) 763, 801, 1386, 1515
SmlI CTYRAG 7 cut(s) 110, 401, 590, 789, 1913, 2208, 2957
SmoI CTYRAG 7 cut(s) 110, 401, 590, 789, 1913, 2208, 2957
Sse9I AATT 9 cut(s) 267, 776, 881, 886, 1531, 1968, 2288, 2339, 2783
SsiI CCGC 1 cut(s) 204
SspMI CTAG 5 cut(s) 369, 467, 912, 930, 1233
SstI GAGCTC 1 cut(s) 2553
StyD4I CCNGG 1 cut(s) 327
StyI CCWWGG 3 cut(s) 429, 579, 2736
TaaI ACNGT 9 cut(s) 139, 409, 483, 553, 610, 623, 1327, 2282, 2953
TaiI ACGT 3 cut(s) 1094, 1249, 1858
TaqII GACCGA 1 cut(s) 278
TasI AATT 9 cut(s) 267, 776, 881, 886, 1531, 1968, 2288, 2339, 2783
TatI WGTACW 3 cut(s) 163, 998, 2945
TfiI GAWTC 8 cut(s) 227, 595, 866, 1063, 1130, 1192, 1592, 2300
TscAI CASTG 5 cut(s) 142, 1498, 1894, 2094, 2712
TseFI GTSAC 4 cut(s) 331, 1242, 2203, 2652
TseI GCWGC 6 cut(s) 56, 641, 1151, 2393, 2528, 2579
Tsp45I GTSAC 4 cut(s) 331, 1242, 2203, 2652
TspGWI ACGGA 2 cut(s) 1292, 1675
TspRI CASTG 5 cut(s) 142, 1498, 1894, 2094, 2712
Tth111I GACNNNGTC 2 cut(s) 1240, 1363
VneI GTGCAC 1 cut(s) 2085
VpaK11BI GGWCC 2 cut(s) 5, 726
XagI CCTNNNNNAGG 2 cut(s) 1071, 1225
XapI RAATTY 3 cut(s) 776, 886, 1531
XhoI CTCGAG 2 cut(s) 110, 590
XmiI GTMKAC 2 cut(s) 1025, 1919
XmnI GAANNNNTTC 1 cut(s) 474
XspI CTAG 5 cut(s) 369, 467, 912, 930, 1233
ZraI GACGTC 1 cut(s) 1092
ZrmI AGTACT 1 cut(s) 2947
Zsp2I ATGCAT 1 cut(s) 1803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.