Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008365.1

Orthogroup ID

OG0001637

Physical Location & Seq

Genomic Coordinates Forward (+)

57345 .. 66502

Gene Structure 9158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008365.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

atgtcgtcctctaagaaagagcttgaggagcagcttaagcaggctggacattctctccttaagcctccttccaacactgatgagctcctcaaacttcttgatgaagttgaggatttgttgtcagatgtggggcaagcaccatctacatccctgcaagatgcgcttctacccacaatgacagcattaatctctacagaactgttacgacacagtcatatggatgtgaaagtttctgttgcatcatgtatcactgagattactagaataacagcaccggaagccccatacaacgatgaacaaatgaaggaaatttttaagctgactgtagcagcttttgaaaacttggcacatctatccagtcgctcttacaaaaaggcagcttccattctaagagttgttgcgaaggtcaggtcaagtgtgatgatgctggaccttgactgttacacattaattgctgagatgtttcaatatttcctaaatataatccagtccaaccatccacatgctgtattttcagacatgcaaactattatgacaatggttttagatgaaattcatgaaagtgaagaaattcccttggaacttctcaaaattcttttatcaagcgttagaaaggaaaatcagaatgtttcacctttttcttggaaattgggggagacagtactcgataattgttctgctaaggttaaaccgtacctcatggaggcagtgaagtccatgggtactgctatggacgattatgctcatatagtggcttctatatgccaaaatggatctggtgccctcaaacttgatcatgtcaatgattctgcaaagaatctggtgacagaggtagttactgctgatgctgcttgtccgtcagcaattgacaaatctgtgcctgcttccgctcgtgatgaacataaagttttacgtgactcttctaaaacattacagcgttgtcatcttactaaacattccaaggaggttgattcacaagatggtgctcaacccgacaaaacattctccgtgaaggctgtcaaatcagtaactgagccagattcgggtaccaaaaagaaagccaaaaggcccagttcttcaatggatccagaggaaaaatcagaaattgagccatattcagctccaaaaaagagaggccggaagccaaattctttaatgaatccagaggaaggctacgagaattattggatgcattctggaaaaaaatctccaaaatcagctggcaacaggaagtcccatgaaaagggatctaatagtttacctactgaagaccatcttcgtttgaaggtcactttgtcatccactttgccatcgacacttaaagaagtgactcagccatccactttgccatctacacatcaaaaagtgactgagccaccaaatgctcaacctaaaatagaaggggagataggatctgcatcttcgtttctacaaaatggccatcctgagggaaccgaatccagaaggggtcggccaaagaagcaagtagccatagcacaacaagaagctaatcctacttccctttcagctgcgaagggagatttttcgagtgctcaggctgaagagaaaagtccacgatcaatggataccttgaatatggaatctaaggagacgagtagcttaaaagcaaaatcacggggacgccctagaaaatttcgtcccaaaacaaatgatgagaccattattgcttctgtacatgttggcacagagaaggaatctgcagttccatgtgatcaggaggaaaaacaacaagagtcagctttgactcttggaactgggaatatcaatgatcagtcagctgtgcaaaaggttgggactgggaatgtgagtgaaacaaaaccaagggggcggccgagaaagcttgctgcaaaaataaatcaggagacctttcttgcttctgaacatgtagtagtcacagaaaaagagtcaccagtcccatgtgatcccgagcaaaaacggcagcaagagccagctctacagtatgaaactgggagtattaaggatcaatcagctataaagggtatcaagaaacgtaggcgggatgatgctcctagtaaagatagtgctgaaggatctcttagcaagaagttttccaagtgtgaggcaaaattggagggagataaaaatgttgttgaaggaacccctaagattgtacgcaagaggaagcgttccattggaaaggaagaggctaatccaatgcccgatcctgatgaccgcttagttggcaaaggaataaaggtttggtggccgcaggacaaaatgttttatgatggtgttgttcgttcctacgacgctgttaaaaagaagcacttggtgctttataatgatggggagaaagaaaacctgaaccttcgaaagcaacggtggcaactgattggagatgattcaaaagatccatgtatacaactgggacaaaagagcgatacaccaaagactgatgcttctgacataactggagcctcagctggcttatccactgttgagtgtatgaagtctgacagtaaatctgcagaccgttctacagttagtgagcctattaaagatgaaacacgggatgacaagtccaaggaaattgacaggttgacggatgatgaaggtgaaatatatgctggcaagttgaaggcagatatgaagactggtattgactctacgcagatcacacctgaggctatgaacttgtctaaggaagagagtgca

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PEARLI-4

Protein Analysis

899

Amino Acids

99.08

Weight (kDa)

6.88

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15940 AT1G80810 AT1G80810 AT1G80810 AT1G80810 AT1G80810
fragaria_vesca	FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720 FvH4_6g28720
malus_domestica	MD17G1222300.v1.1
prunus_persica	Prupe.3G097300_v2.0.a1 Prupe.3G097300_v2.0.a1 Prupe.3G097300_v2.0.a1 Prupe.3G097300_v2.0.a1 Prupe.3G097300_v2.0.a1
pyrus_communis	pycom05g32820 pycom06g06660 pycom09g14350 pycom10g28890 pycom16g06390 pycom17g22600 pycom17g22610 pycom17g22620
rosa_chinensis	RchiOBHm_Chr2g0133121
rosa_laevigata	RLG00000019309
rosa_multiflora	Rmu_sc0000127.1_g000007 Rmu_sc0008365.1_g000009
rosa_roxburghii	Rroxscaffold_2G00111400
rosa_rugosa	Rorug02G0309800 Rorug02G0309900 Rorug02G0310000 Rorug02G0310100 Rorug02G0310200 Rorug02G0310300 Rorug02G0310300
rosa_samantha	Rh2AG362200 Rh2BG367900 Rh2CG345500 Rh2DG385000
rosa_wichuraiana	Rw2G029460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2322
Acc65I	GGTACC	1 cut(s)	1046
AccB1I	GGYRCC	2 cut(s)	779, 1046
AccBSI	CCGCTC	1 cut(s)	890
AccI	GTMKAC	1 cut(s)	2401
AciI	CCGC	5 cut(s)	888, 1849, 2038, 2215, 2249
AcoI	YGGCCR	4 cut(s)	1438, 1472, 1850, 2246
AcsI	RAATTY	6 cut(s)	309, 552, 570, 591, 1147, 1652
AcuI	CTGAAG	3 cut(s)	1287, 1581, 2088
AcyI	GRCGYC	1 cut(s)	1642
AdeI	CACNNNGTG	1 cut(s)	2314
AfaI	GTAC	6 cut(s)	663, 695, 724, 1048, 1695, 2154
AfiI	CCNNNNNNNGG	5 cut(s)	703, 1043, 1169, 1243, 1447
AflII	CTTAAG	2 cut(s)	35, 59
AflIII	ACRYGT	2 cut(s)	1696, 1903
AgsI	TTSAA	8 cut(s)	338, 467, 1080, 1285, 1594, 2135, 2388, 2620
AjuI	GAANNNNNNNTTGG	2 cut(s)	2224, 2256
Alw21I	GWGCWC	3 cut(s)	87, 988, 1555
Alw26I	GTCTC	4 cut(s)	650, 1604, 1670, 1877
AlwNI	CAGNNNCTG	1 cut(s)	1031
Ama87I	CYCGRG	1 cut(s)	1946
AoxI	GGCC	6 cut(s)	1067, 1135, 1438, 1472, 1850, 2246
ApeKI	GCWGC	7 cut(s)	31, 329, 377, 848, 1529, 1865, 1960
ApoI	RAATTY	6 cut(s)	309, 552, 570, 591, 1147, 1652
ArsI	GACNNNNNNTTYG	2 cut(s)	395, 427
AseI	ATTAAT	2 cut(s)	185, 449
Asp700I	GAANNNNTTC	1 cut(s)	570
Asp718I	GGTACC	1 cut(s)	1046
AspLEI	GCGC	1 cut(s)	163
AspS9I	GGNCC	2 cut(s)	430, 1068
AsuHPI	GGTGA	4 cut(s)	624, 835, 1920, 2609
AsuII	TTCGAA	1 cut(s)	2353
AvaI	CYCGRG	1 cut(s)	1946
AvaII	GGWCC	1 cut(s)	430
AxyI	CCTNAGG	2 cut(s)	1446, 2664
BaeGI	GKGCMC	1 cut(s)	784
BalI	TGGCCA	1 cut(s)	1440
BamHI	GGATCC	1 cut(s)	1084
BanI	GGYRCC	2 cut(s)	779, 1046
BanII	GRGCYC	1 cut(s)	87
BauI	CACGAG	1 cut(s)	891
BbsI	GAAGAC	2 cut(s)	1275, 2639
Bbv12I	GWGCWC	3 cut(s)	87, 988, 1555
BbvCI	CCTCAGC	1 cut(s)	2461
BbvI	GCAGC	7 cut(s)	43, 341, 389, 835, 1516, 1852, 1972
BceAI	ACGGC	1 cut(s)	1973
BciVI	GTATCC	1 cut(s)	1579
BclI	TGATCA	3 cut(s)	793, 1732, 1789
BcoDI	GTCTC	4 cut(s)	650, 1604, 1670, 1877
BfaI	CTAG	3 cut(s)	261, 1647, 2052
BfmI	CTRYAG	6 cut(s)	192, 324, 1719, 1976, 2508, 2520
BfrI	CTTAAG	2 cut(s)	35, 59
BfuI	GTATCC	1 cut(s)	1579
BisI	GCNGC	9 cut(s)	32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
BlsI	GCNGC	9 cut(s)	33, 331, 379, 850, 1531, 1851, 1867, 1962, 2250
BmcAI	AGTACT	1 cut(s)	663
Bme18I	GGWCC	1 cut(s)	430
BmeT110I	CYCGRG	1 cut(s)	1946
BmgT120I	GGNCC	2 cut(s)	430, 1068
BmiI	GGNNCC	6 cut(s)	781, 1048, 1086, 1453, 2140, 2458
BmrI	ACTGGG	5 cut(s)	1065, 1785, 1827, 1998, 2417
BmsI	GCATC	8 cut(s)	148, 248, 414, 835, 1179, 1427, 2035, 2428
BmuI	ACTGGG	5 cut(s)	1065, 1785, 1827, 1998, 2417
BpiI	GAAGAC	2 cut(s)	1275, 2639
BpmI	CTGGAG	1 cut(s)	2475
Bpu10I	CCTNAGC	3 cut(s)	681, 1554, 2461
Bpu14I	TTCGAA	1 cut(s)	2353
BpuEI	CTTGAG	1 cut(s)	44
BsaAI	YACGTR	1 cut(s)	914
BsaBI	GATNNNNATC	1 cut(s)	1417
BsaHI	GRCGYC	1 cut(s)	1642
BsaI	GGTCTC	2 cut(s)	1670, 1877
BsaJI	CCNNGG	5 cut(s)	576, 717, 960, 1841, 2565
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	2 cut(s)	39, 69
Bsc4I	CCNNNNNNNGG	5 cut(s)	703, 1043, 1169, 1243, 1447
Bse21I	CCTNAGG	2 cut(s)	1446, 2664
Bse8I	GATNNNNATC	1 cut(s)	1417
BseDI	CCNNGG	5 cut(s)	576, 717, 960, 1841, 2565
BseJI	GATNNNNATC	1 cut(s)	1417
BseLI	CCNNNNNNNGG	5 cut(s)	703, 1043, 1169, 1243, 1447
BseMII	CTCAG	9 cut(s)	243, 447, 1023, 1346, 1362, 1437, 1568, 2475, 2655
BseRI	GAGGAG	2 cut(s)	41, 77
BseSI	GKGCMC	1 cut(s)	784
BseX3I	CGGCCG	1 cut(s)	1850
BseXI	GCAGC	7 cut(s)	43, 341, 389, 835, 1516, 1852, 1972
Bsh1285I	CGRYCG	1 cut(s)	1853
BshFI	GGCC	6 cut(s)	1069, 1137, 1440, 1474, 1852, 2248
BshNI	GGYRCC	2 cut(s)	779, 1046
BsiEI	CGRYCG	1 cut(s)	1853
BsiHKAI	GWGCWC	3 cut(s)	87, 988, 1555
BsiHKCI	CYCGRG	1 cut(s)	1946
BsiSI	CCGG	2 cut(s)	275, 1138
BslFI	GGGAC	6 cut(s)	1219, 1644, 1653, 1828, 1919, 2424
BslI	CCNNNNNNNGG	5 cut(s)	703, 1043, 1169, 1243, 1447
BsmAI	GTCTC	4 cut(s)	650, 1604, 1670, 1877
BsmBI	CGTCTC	1 cut(s)	1604
BsmFI	GGGAC	6 cut(s)	1219, 1644, 1653, 1828, 1919, 2424
BsmI	GAATGC	1 cut(s)	1192
BsnI	GGCC	6 cut(s)	1069, 1137, 1440, 1474, 1852, 2248
Bso31I	GGTCTC	2 cut(s)	1670, 1877
BsoBI	CYCGRG	1 cut(s)	1946
Bsp119I	TTCGAA	1 cut(s)	2353
Bsp1286I	GDGCHC	4 cut(s)	87, 784, 988, 1555
Bsp1407I	TGTACA	1 cut(s)	1693
Bsp19I	CCATGG	1 cut(s)	717
BspACI	CCGC	5 cut(s)	888, 1849, 2038, 2215, 2249
BspANI	GGCC	6 cut(s)	1069, 1137, 1440, 1474, 1852, 2248
BspCNI	CTCAG	9 cut(s)	244, 448, 1024, 1345, 1363, 1438, 1567, 2474, 2656
BspHI	TCATGA	1 cut(s)	556
BspLI	GGNNCC	6 cut(s)	781, 1048, 1086, 1453, 2140, 2458
BspMAI	CTGCAG	2 cut(s)	1723, 2512
BspT104I	TTCGAA	1 cut(s)	2353
BspT107I	GGYRCC	2 cut(s)	779, 1046
BspTI	CTTAAG	2 cut(s)	35, 59
BspTNI	GGTCTC	2 cut(s)	1670, 1877
BsrBI	CCGCTC	1 cut(s)	890
BsrGI	TGTACA	1 cut(s)	1693
BssECI	CCNNGG	5 cut(s)	576, 717, 960, 1841, 2565
BssNAI	GTATAC	1 cut(s)	2402
BssNI	GRCGYC	1 cut(s)	1642
BssSI	CACGAG	1 cut(s)	891
BssT1I	CCWWGG	5 cut(s)	576, 717, 960, 1841, 2565
Bst1107I	GTATAC	1 cut(s)	2402
Bst2BI	CACGAG	1 cut(s)	891
Bst6I	CTCTTC	4 cut(s)	925, 1557, 2178, 2682
BstACI	GRCGYC	1 cut(s)	1642
BstAFI	CTTAAG	2 cut(s)	35, 59
BstAPI	GCANNNNNTGC	1 cut(s)	2314
BstAUI	TGTACA	1 cut(s)	1693
BstBAI	YACGTR	1 cut(s)	914
BstBI	TTCGAA	1 cut(s)	2353
BstC8I	GCNNGC	8 cut(s)	42, 135, 882, 1222, 1863, 1971, 2467, 2611
BstDSI	CCRYGG	1 cut(s)	717
BstENI	CCTNNNNNAGG	1 cut(s)	701
BstHHI	GCGC	1 cut(s)	163
BstMAI	GTCTC	4 cut(s)	650, 1604, 1670, 1877
BstMCI	CGRYCG	1 cut(s)	1853
BstNSI	RCATGY	4 cut(s)	506, 523, 1700, 1907
BstSFI	CTRYAG	6 cut(s)	192, 324, 1719, 1976, 2508, 2520
BstSLI	GKGCMC	1 cut(s)	784
BstV1I	GCAGC	7 cut(s)	43, 341, 389, 835, 1516, 1852, 1972
BstV2I	GAAGAC	2 cut(s)	1275, 2639
BstX2I	RGATCY	6 cut(s)	773, 1084, 1247, 1412, 2072, 2392
BstYI	RGATCY	6 cut(s)	773, 1084, 1247, 1412, 2072, 2392
BstZ17I	GTATAC	1 cut(s)	2402
BstZI	CGGCCG	1 cut(s)	1850
Bsu36I	CCTNAGG	2 cut(s)	1446, 2664
BsuI	GTATCC	1 cut(s)	1579
BsuRI	GGCC	6 cut(s)	1069, 1137, 1440, 1474, 1852, 2248
BtgI	CCRYGG	1 cut(s)	717
BtsI	GCAGTG	1 cut(s)	714
BtsIMutI	CAGTG	4 cut(s)	75, 249, 714, 2475
Cac8I	GCNNGC	8 cut(s)	42, 135, 882, 1222, 1863, 1971, 2467, 2611
CaiI	CAGNNNCTG	1 cut(s)	1031
CciI	TCATGA	1 cut(s)	556
CfoI	GCGC	1 cut(s)	163
Cfr13I	GGNCC	2 cut(s)	430, 1068
CseI	GACGC	2 cut(s)	1650, 2300
Csp6I	GTAC	6 cut(s)	662, 694, 723, 1047, 1694, 2153
CviQI	GTAC	6 cut(s)	662, 694, 723, 1047, 1694, 2153
DraIII	CACNNNGTG	1 cut(s)	2314
EaeI	YGGCCR	4 cut(s)	1438, 1472, 1850, 2246
EagI	CGGCCG	1 cut(s)	1850
Eam1104I	CTCTTC	4 cut(s)	925, 1557, 2178, 2682
EarI	CTCTTC	4 cut(s)	925, 1557, 2178, 2682
Ecl136II	GAGCTC	1 cut(s)	85
EclXI	CGGCCG	1 cut(s)	1850
Eco130I	CCWWGG	5 cut(s)	576, 717, 960, 1841, 2565
Eco24I	GRGCYC	1 cut(s)	87
Eco31I	GGTCTC	2 cut(s)	1670, 1877
Eco47I	GGWCC	1 cut(s)	430
Eco52I	CGGCCG	1 cut(s)	1850
Eco53kI	GAGCTC	1 cut(s)	85
Eco57I	CTGAAG	3 cut(s)	1287, 1581, 2088
Eco81I	CCTNAGG	2 cut(s)	1446, 2664
Eco88I	CYCGRG	1 cut(s)	1946
EcoICRI	GAGCTC	1 cut(s)	85
EcoNI	CCTNNNNNAGG	1 cut(s)	701
EcoT14I	CCWWGG	5 cut(s)	576, 717, 960, 1841, 2565
EcoT22I	ATGCAT	1 cut(s)	1194
EcoT38I	GRGCYC	1 cut(s)	87
ErhI	CCWWGG	5 cut(s)	576, 717, 960, 1841, 2565
Esp3I	CGTCTC	1 cut(s)	1604
FalI	AAGNNNNNCTT	8 cut(s)	147, 179, 1260, 1292, 2061, 2093, 2294, 2326
FaqI	GGGAC	6 cut(s)	1219, 1644, 1653, 1828, 1919, 2424
FauI	CCCGC	1 cut(s)	2031
FauNDI	CATATG	1 cut(s)	216
FbaI	TGATCA	3 cut(s)	793, 1732, 1789
FblI	GTMKAC	1 cut(s)	2401
Fnu4HI	GCNGC	9 cut(s)	32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
FriOI	GRGCYC	1 cut(s)	87
Fsp4HI	GCNGC	9 cut(s)	32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
FspBI	CTAG	3 cut(s)	261, 1647, 2052
GlaI	GCGC	1 cut(s)	162
GluI	GCNGC	9 cut(s)	32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
GsuI	CTGGAG	1 cut(s)	2475
HaeIII	GGCC	6 cut(s)	1069, 1137, 1440, 1474, 1852, 2248
HapII	CCGG	2 cut(s)	275, 1138
HgaI	GACGC	2 cut(s)	1650, 2300
HhaI	GCGC	1 cut(s)	163
Hin1I	GRCGYC	1 cut(s)	1642
Hin6I	GCGC	1 cut(s)	161
HinP1I	GCGC	1 cut(s)	161
HincII	GTYRAC	1 cut(s)	2583
HindII	GTYRAC	1 cut(s)	2583
HindIII	AAGCTT	1 cut(s)	1859
HpaII	CCGG	2 cut(s)	275, 1138
HphI	GGTGA	4 cut(s)	624, 835, 1920, 2609
Hpy166II	GTNNAC	4 cut(s)	1259, 1574, 2402, 2583
Hpy188I	TCNGA	7 cut(s)	124, 517, 624, 1102, 1900, 2446, 2497
Hpy8I	GTNNAC	4 cut(s)	1259, 1574, 2402, 2583
Hpy99I	CGWCG	1 cut(s)	2294
HpyCH4IV	ACGT	2 cut(s)	913, 2032
HpySE526I	ACGT	2 cut(s)	913, 2032
Hsp92I	GRCGYC	1 cut(s)	1642
HspAI	GCGC	1 cut(s)	161
KpnI	GGTACC	1 cut(s)	1050
Ksp22I	TGATCA	3 cut(s)	793, 1732, 1789
LmnI	GCTCC	5 cut(s)	28, 90, 1126, 2053, 2456
Lsp1109I	GCAGC	7 cut(s)	43, 341, 389, 835, 1516, 1852, 1972
LweI	GCATC	8 cut(s)	148, 248, 414, 835, 1179, 1427, 2035, 2428
MaeI	CTAG	3 cut(s)	261, 1647, 2052
MaeII	ACGT	2 cut(s)	913, 2032
MbiI	CCGCTC	1 cut(s)	890
MboII	GAAGA	9 cut(s)	578, 912, 1068, 1268, 1280, 1413, 1574, 2195, 2644
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	6 cut(s)	773, 1084, 1247, 1412, 2072, 2392
MhlI	GDGCHC	4 cut(s)	87, 784, 988, 1555
MlsI	TGGCCA	1 cut(s)	1440
MluNI	TGGCCA	1 cut(s)	1440
MlyI	GAGTC	6 cut(s)	911, 1324, 1759, 1763, 1934, 2639
MmeI	TCCRAC	2 cut(s)	96, 516
Mox20I	TGGCCA	1 cut(s)	1440
Mph1103I	ATGCAT	1 cut(s)	1194
MroXI	GAANNNNTTC	1 cut(s)	570
MscI	TGGCCA	1 cut(s)	1440
MslI	CAYNNNNRTG	4 cut(s)	219, 501, 561, 801
Msp20I	TGGCCA	1 cut(s)	1440
MspA1I	CMGCKG	4 cut(s)	1220, 1529, 1799, 2465
MspCI	CTTAAG	2 cut(s)	35, 59
MspI	CCGG	2 cut(s)	275, 1138
MunI	CAATTG	1 cut(s)	864
Mva1269I	GAATGC	1 cut(s)	1192
NcoI	CCATGG	1 cut(s)	717
NdeI	CATATG	1 cut(s)	216
NlaIV	GGNNCC	6 cut(s)	781, 1048, 1086, 1453, 2140, 2458
NmeAIII	GCCGAG	1 cut(s)	1878
NmuCI	GTSAC	7 cut(s)	823, 914, 1288, 1327, 1366, 1912, 1926
NsiI	ATGCAT	1 cut(s)	1194
NspI	RCATGY	4 cut(s)	506, 523, 1700, 1907
NspV	TTCGAA	1 cut(s)	2353
PagI	TCATGA	1 cut(s)	556
PciI	ACATGT	2 cut(s)	1696, 1903
PctI	GAATGC	1 cut(s)	1192
PdmI	GAANNNNTTC	1 cut(s)	570
PfeI	GAWTC	9 cut(s)	806, 817, 971, 1040, 1159, 1457, 1601, 1715, 2384
PflFI	GACNNNGTC	1 cut(s)	210
PkrI	GCNGC	9 cut(s)	33, 331, 379, 850, 1531, 1851, 1867, 1962, 2250
PleI	GAGTC	6 cut(s)	911, 1324, 1759, 1762, 1933, 2639
PpsI	GAGTC	6 cut(s)	911, 1324, 1759, 1762, 1933, 2639
Ppu21I	YACGTR	1 cut(s)	914
PscI	ACATGT	2 cut(s)	1696, 1903
PshBI	ATTAAT	2 cut(s)	185, 449
PsiI	TTATAA	1 cut(s)	2322
Psp124BI	GAGCTC	1 cut(s)	87
PspN4I	GGNNCC	6 cut(s)	781, 1048, 1086, 1453, 2140, 2458
PspPI	GGNCC	2 cut(s)	430, 1068
PstI	CTGCAG	2 cut(s)	1723, 2512
PstNI	CAGNNNCTG	1 cut(s)	1031
PsuI	RGATCY	6 cut(s)	773, 1084, 1247, 1412, 2072, 2392
PsyI	GACNNNGTC	1 cut(s)	210
PvuII	CAGCTG	4 cut(s)	1220, 1529, 1799, 2465
RsaI	GTAC	6 cut(s)	663, 695, 724, 1048, 1695, 2154
RsaNI	GTAC	6 cut(s)	662, 694, 723, 1047, 1694, 2153
RseI	CAYNNNNRTG	4 cut(s)	219, 501, 561, 801
SacI	GAGCTC	1 cut(s)	87
SatI	GCNGC	9 cut(s)	32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
Sau96I	GGNCC	2 cut(s)	430, 1068
ScaI	AGTACT	1 cut(s)	663
SchI	GAGTC	6 cut(s)	911, 1324, 1759, 1763, 1934, 2639
SduI	GDGCHC	4 cut(s)	87, 784, 988, 1555
SfaNI	GCATC	8 cut(s)	148, 248, 414, 835, 1179, 1427, 2035, 2428
SfcI	CTRYAG	6 cut(s)	192, 324, 1719, 1976, 2508, 2520
SfuI	TTCGAA	1 cut(s)	2353
SinI	GGWCC	1 cut(s)	430
SmiMI	CAYNNNNRTG	4 cut(s)	219, 501, 561, 801
SmlI	CTYRAG	3 cut(s)	23, 35, 59
SmoI	CTYRAG	3 cut(s)	23, 35, 59
SsiI	CCGC	5 cut(s)	888, 1849, 2038, 2215, 2249
SspI	AATATT	1 cut(s)	470
SspMI	CTAG	3 cut(s)	261, 1647, 2052
SstI	GAGCTC	1 cut(s)	87
StyI	CCWWGG	5 cut(s)	576, 717, 960, 1841, 2565
TaiI	ACGT	2 cut(s)	916, 2035
TaqI	TCGA	4 cut(s)	666, 1313, 1547, 2353
TatI	WGTACW	2 cut(s)	661, 1693
TauI	GCSGC	2 cut(s)	1852, 2251
TfiI	GAWTC	9 cut(s)	806, 817, 971, 1040, 1159, 1457, 1601, 1715, 2384
TscAI	CASTG	4 cut(s)	82, 256, 714, 2482
TseFI	GTSAC	7 cut(s)	823, 914, 1288, 1327, 1366, 1912, 1926
TseI	GCWGC	7 cut(s)	31, 329, 377, 848, 1529, 1865, 1960
Tsp45I	GTSAC	7 cut(s)	823, 914, 1288, 1327, 1366, 1912, 1926
TspGWI	ACGGA	3 cut(s)	846, 997, 2600
TspRI	CASTG	4 cut(s)	82, 256, 714, 2482
Tth111I	GACNNNGTC	1 cut(s)	210
Vha464I	CTTAAG	2 cut(s)	35, 59
VpaK11BI	GGWCC	1 cut(s)	430
VspI	ATTAAT	2 cut(s)	185, 449
XagI	CCTNNNNNAGG	1 cut(s)	701
XapI	RAATTY	6 cut(s)	309, 552, 570, 591, 1147, 1652
XceI	RCATGY	4 cut(s)	506, 523, 1700, 1907
XcmI	CCANNNNNNNNNTGG	2 cut(s)	773, 1078
XmiI	GTMKAC	1 cut(s)	2401
XmnI	GAANNNNTTC	1 cut(s)	570
XspI	CTAG	3 cut(s)	261, 1647, 2052
ZrmI	AGTACT	1 cut(s)	663
Zsp2I	ATGCAT	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.