Rh2BG367900

Sister chromatid cohesion protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0001637
Physical Location & Seq
Reverse (-)
51340271 .. 51372172
31902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG367900.1

Sequence Viewer

Length: 3156 bp
ATGTTCAACGGAACATTTCAGAGCGAGATTGACAACTTGTCCAATCTCGAGATCCTAGACATGTCCTTCAATGAAGAAATGAAAGAATTCAAACTTGGAACCTCATTCAACATTGGCGAGAGATATATCAATTTACTAATAACTAACAATCAACAAATACGAGTTTTATCAACCCAAACTATGACAAGCAAGGCTTCTAAAATTAAGGTCTCAGAGTTTGAAACACAAAACCACCAAACAAAAGGGTCTTCCGGAGTTCTGACAATGTCGTCCTCTAAGAAAGAGCTTGAGGAGCAGCTTAAGCAGGCTGGACATTCTCTCCTTAAGCCTCCTTCCAACACTGATGAGCTCCTCAAACTTCTTGATGAAGTTGAGGATTTGTTGTCAGATGTGGGGCAAGCACCATCTACATCCCTGCAAGATGCGCTTCTACCCACAATGACAGCATTAATCTCTACAGAACTGTTACGACACAGTCATATGGATGTGAAAGTTTCTGTTGCATCATGTATCACTGAGATTACTAGAATAACAGCACCGGAAGCCCCATACAACGATGAACAAATGAAGGAAATTTTTAAGCTGACTGTAGCAGCTTTTGAAAACTTGGCACATCTATCCAGTCGCTCTTACAAAAAGGCAGCTTCCATTCTAAGAGTTGTTGCGAAGGTCAGGTCAAGTGTGATGATGCTGGACCTTGACTGTTACACATTAATTGCTGAGATGTTTCAATATTTCCTAAATATAATCCAGTCCAACCATCCACATGCTGTATTTTCAGACATGCAAACTATTATGACAATGGTTTTAGATGAAATTCATGAAAGTGAAGAAATTCCCTTGGAACTTCTCAAAATTCTTTTATCAAGCGTTAGAAAGGAAAATCAGAATGTTTCGCCTTTTTCTTGGAAATTGGGGGAGACAGTACTCGATAATTGTTCTGCTAAGGTTAAACCGTACCTCATGGAGGCAGTGAAGTCCATGGGTACTGCTATGGACGATTATGCTCATATAGTGGCTTCTATATGCCAAAATGGATCTGGTGCCCTCAAACTTGATCATGTCAATGATTCTGCAAAGAATCTGGTGACAGAGGTAGTTACTGCTGATGCTGCTTGTCCTTCAGCAATTGACAAATCTGTGCCTGCTTCCGCTCGTGATGAACATATAGTTTTACGTGACTCTTCTAAAACATTACAGCGTTGTCATCTTACTAAACATTCCAAGGAGGTTGATTCACAAGATGGTGCTCAACCCAACAAAACATTCTCCGTGAAGGCTGTCAAATCAGTAACTGAGCCAGATTCAGGTACCAAAAAGAAAGCCAAAAGGCCCAGTTCTTCAATGGATCCAGAGGAAAAATCAGAAATTGAGCCATATTCAGCTCCAAAAAAGAGAGGCCGGAAGCCAAATTCTTTAATGAATCCAGAGGAAGGCTACGAGAATTATTGGATGCATTCTGGAAAAAAATCTCCAAAATCAGCTGGCAACAGGAAGTCCCATGAAAAGGGATCTAATAGTTTACCTACTGAAGACCATCTTCGTTTGAAGGTCACTTTGTCATCCACTTTGCCATCGACACTTAAAGAAGTGACTCAGCCATCCACTTTGCCATCTACACATCAAAAAGTGACTGAGCCACCAAATGCTCAACCTAAAATAGAAGGGGAGATAGGATCTGCATCTTCGTTTCTACAAAATGGCCATCCTGAGGGAACCGAATCCAGAAGGGGTCGGCCAAAGAAGCAAGTAGCCATAGCACAACAAGAAGCTAATCCTACTTCCCTTTCAGCTGCGAAGGGAGATTTTTTGAGTGCTCAGGCTGAAGAGAAAAGTCCACGATCAATGGATACCTTGAATATGGAATCTAAGGAGACAAGTAGCTTAAAAGCAAAATCACGGGGACGCCCTAGAAAATTTCGTGCCAAAACAAATGATGAGACCATTATTGCTTCTGTACATGTTGGCACAGAGAAGGAATCTGCAGTTCCATGTGATCAGGAGGAAAAACAACAAGAGTCAGCTTTGACTCTTGGAACTGGGAATATCAATGATCAGTCGGCTGTGCAAAAGGTTGGGACTGGGAATGTGAGTGAAACAAAACCAAGGGGGCGGCCGAGAAAGCTTGCTGCAAAAATAAATCAGGAGACCTTTCTTGCTTCTGCACATGTAGTAGTCACAGAAAAAGAGTCACCAGTCCCATGTGATCCCGAGCAAAAACGGCAGCAAGAGCCAGCTCTACAGTATGATACTGGGAGTATTAAGGATCAATCAGCTATAAAGGGTATCAAGAAACGTAGGCGGGATGATGCTCCTAGTAAAGATAGTGCTGAAGGATCTCTTAGCAAGAAGTTTTCCAAGTGTGAGGCAAAATTGGAGGGAGATAAAAATGTTGTTGAAGGAACCCCTAAGATTGTACGCAAGAGGAAGCGTTCCATTGGAAAGGAAGAGGCTAATCCAATGCCCGATCCTGATGACCGCTTAGTTGGCAAAGGAATAAAGGTTTGGTGGCCGCAGGACAAAACGTATTATGATGGTGTTGTTCGTTCCTACGACACTGTTAAAAAGAAGCACTTGGTGCTTTATAATGATGGGGAGAAAGAAAACCTGAACCTTCGAAAGCAACGGTGGCAACTGATTGGAGATGATTCAAAAGATCCATGTATACAACTGGGACAAAAGAGTGATACACCAAAGACTGATGCTTCTGACATACCACAAAAGAGGAAGCGGAAAGCAAAATCAGAGTCATCTAAGCAAGCAAATGCTGGTTTCTCCTTGAAAAGGATATCTAGAACTGGAGCCTCAGCTGGCTTATCCACTGTTGAGTGTATGAAGTCTGACAGTAAATCTGCAGACCGTTCTACAGTTAGTGAGCCTATTAAAGATGAAACACGGGATGACAAGTCCAAGGAAATTGACAGGTTGACGGATGATGAAGGTGAAATATATGCTGGCAAGTTGAAGGCAGATATGAAGACTGGTATTGACTCTACGCAGATCACACCTGAGGCTATGAACTTGTCTAAGGAAGAGAGTGCAAAAGTTGATATTGAACCCTCTGTTAGAGATGGTGCCAAAGAAATGAAAGAATTGAGCAATGGTGCAAAGGATGCAAGTTCCTCCCCTTCACCTGTGTTGGACAAGGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PEARLI-4

Protein Analysis

1051

Amino Acids

115.89

Weight (kDa)

8.28

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 115 - 322 2.5e-47 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2586
AasI GACNNNNNNGTC 1 cut(s) 268
Acc65I GGTACC 1 cut(s) 1310
AccB1I GGYRCC 3 cut(s) 1043, 1310, 3074
AccBSI CCGCTC 1 cut(s) 1154
AccI GTMKAC 1 cut(s) 2665
AccIII TCCGGA 1 cut(s) 251
AciI CCGC 6 cut(s) 1152, 2113, 2302, 2479, 2513, 2731
AcoI YGGCCR 4 cut(s) 1702, 1736, 2114, 2510
AcsI RAATTY 7 cut(s) 86, 573, 816, 834, 855, 1411, 1916
AcuI CTGAAG 4 cut(s) 1107, 1551, 1845, 2352
AcyI GRCGYC 1 cut(s) 1906
AdeI CACNNNGTG 1 cut(s) 2578
AfaI GTAC 6 cut(s) 927, 959, 988, 1312, 1959, 2418
AfiI CCNNNNNNNGG 6 cut(s) 967, 1307, 1433, 1507, 1711, 2784
AflII CTTAAG 2 cut(s) 299, 323
AflIII ACRYGT 3 cut(s) 60, 1960, 2167
AhdI GACNNNNNGTC 1 cut(s) 37
AjuI GAANNNNNNNTTGG 6 cut(s) 78, 110, 1250, 1282, 2488, 2520
Alw21I GWGCWC 3 cut(s) 351, 1252, 1819
Alw26I GTCTC 5 cut(s) 214, 914, 1868, 1934, 2141
AlwNI CAGNNNCTG 1 cut(s) 1295
Ama87I CYCGRG 2 cut(s) 47, 2210
Aor13HI TCCGGA 1 cut(s) 251
AoxI GGCC 6 cut(s) 1331, 1399, 1702, 1736, 2114, 2510
ApeKI GCWGC 7 cut(s) 295, 593, 641, 1112, 1793, 2129, 2224
ApoI RAATTY 7 cut(s) 86, 573, 816, 834, 855, 1411, 1916
ArsI GACNNNNNNTTYG 4 cut(s) 659, 691, 2732, 2764
AseI ATTAAT 2 cut(s) 449, 713
Asp700I GAANNNNTTC 2 cut(s) 86, 834
Asp718I GGTACC 1 cut(s) 1310
AspLEI GCGC 1 cut(s) 427
AspS9I GGNCC 2 cut(s) 694, 1332
AsuHPI GGTGA 4 cut(s) 1099, 2184, 2954, 3123
AsuII TTCGAA 1 cut(s) 2617
AvaI CYCGRG 2 cut(s) 47, 2210
AvaII GGWCC 1 cut(s) 694
AxyI CCTNAGG 2 cut(s) 1710, 3009
BaeGI GKGCMC 1 cut(s) 1048
BalI TGGCCA 1 cut(s) 1704
BamHI GGATCC 1 cut(s) 1348
BanI GGYRCC 3 cut(s) 1043, 1310, 3074
BanII GRGCYC 1 cut(s) 351
BauI CACGAG 1 cut(s) 1155
BbsI GAAGAC 3 cut(s) 240, 1539, 2984
Bbv12I GWGCWC 3 cut(s) 351, 1252, 1819
BbvCI CCTCAGC 1 cut(s) 2806
BbvI GCAGC 7 cut(s) 307, 605, 653, 1099, 1780, 2116, 2236
BceAI ACGGC 1 cut(s) 2237
BciVI GTATCC 1 cut(s) 1843
BclI TGATCA 3 cut(s) 1057, 1996, 2053
BcoDI GTCTC 5 cut(s) 214, 914, 1868, 1934, 2141
BfaI CTAG 5 cut(s) 56, 525, 1911, 2316, 2793
BfmI CTRYAG 6 cut(s) 456, 588, 1983, 2240, 2853, 2865
BfrI CTTAAG 2 cut(s) 299, 323
BfuI GTATCC 1 cut(s) 1843
BisI GCNGC 9 cut(s) 296, 594, 642, 1113, 1794, 2114, 2130, 2225, 2513
BlsI GCNGC 9 cut(s) 297, 595, 643, 1114, 1795, 2115, 2131, 2226, 2514
BmcAI AGTACT 1 cut(s) 927
Bme18I GGWCC 1 cut(s) 694
BmeRI GACNNNNNGTC 1 cut(s) 37
BmeT110I CYCGRG 2 cut(s) 47, 2210
BmgT120I GGNCC 2 cut(s) 694, 1332
BmiI GGNNCC 8 cut(s) 100, 1045, 1312, 1350, 1717, 2404, 2803, 3076
BmrI ACTGGG 5 cut(s) 1329, 2049, 2091, 2262, 2681
BmsI GCATC 9 cut(s) 412, 512, 678, 1099, 1443, 1691, 2299, 2692, 3103
BmuI ACTGGG 5 cut(s) 1329, 2049, 2091, 2262, 2681
BpiI GAAGAC 3 cut(s) 240, 1539, 2984
BpmI CTGGAG 1 cut(s) 2820
Bpu10I CCTNAGC 3 cut(s) 945, 1818, 2806
Bpu14I TTCGAA 1 cut(s) 2617
BpuEI CTTGAG 1 cut(s) 308
BsaAI YACGTR 1 cut(s) 1178
BsaBI GATNNNNATC 1 cut(s) 1681
BsaHI GRCGYC 1 cut(s) 1906
BsaI GGTCTC 3 cut(s) 214, 1934, 2141
BsaJI CCNNGG 5 cut(s) 840, 981, 1224, 2105, 2910
BsaWI WCCGGW 2 cut(s) 251, 538
BsaXI ACNNNNNCTCC 2 cut(s) 303, 333
Bsc4I CCNNNNNNNGG 6 cut(s) 967, 1307, 1433, 1507, 1711, 2784
Bse21I CCTNAGG 2 cut(s) 1710, 3009
Bse3DI GCAATG 1 cut(s) 3106
Bse8I GATNNNNATC 1 cut(s) 1681
BseAI TCCGGA 1 cut(s) 251
BseDI CCNNGG 5 cut(s) 840, 981, 1224, 2105, 2910
BseJI GATNNNNATC 1 cut(s) 1681
BseLI CCNNNNNNNGG 6 cut(s) 967, 1307, 1433, 1507, 1711, 2784
BseMI GCAATG 1 cut(s) 3106
BseRI GAGGAG 2 cut(s) 305, 341
BseSI GKGCMC 1 cut(s) 1048
BseX3I CGGCCG 1 cut(s) 2114
BseXI GCAGC 7 cut(s) 307, 605, 653, 1099, 1780, 2116, 2236
BsgI GTGCAG 1 cut(s) 2148
Bsh1285I CGRYCG 1 cut(s) 2117
BshFI GGCC 6 cut(s) 1333, 1401, 1704, 1738, 2116, 2512
BshNI GGYRCC 3 cut(s) 1043, 1310, 3074
BsiEI CGRYCG 1 cut(s) 2117
BsiHKAI GWGCWC 3 cut(s) 351, 1252, 1819
BsiHKCI CYCGRG 2 cut(s) 47, 2210
BsiSI CCGG 3 cut(s) 252, 539, 1402
BslFI GGGAC 5 cut(s) 1483, 1917, 2092, 2183, 2688
BslI CCNNNNNNNGG 6 cut(s) 967, 1307, 1433, 1507, 1711, 2784
BsmAI GTCTC 5 cut(s) 214, 914, 1868, 1934, 2141
BsmFI GGGAC 5 cut(s) 1483, 1917, 2092, 2183, 2688
BsmI GAATGC 1 cut(s) 1456
BsnI GGCC 6 cut(s) 1333, 1401, 1704, 1738, 2116, 2512
Bso31I GGTCTC 3 cut(s) 214, 1934, 2141
BsoBI CYCGRG 2 cut(s) 47, 2210
Bsp119I TTCGAA 1 cut(s) 2617
Bsp1286I GDGCHC 4 cut(s) 351, 1048, 1252, 1819
Bsp13I TCCGGA 1 cut(s) 251
Bsp1407I TGTACA 1 cut(s) 1957
Bsp19I CCATGG 1 cut(s) 981
BspACI CCGC 6 cut(s) 1152, 2113, 2302, 2479, 2513, 2731
BspANI GGCC 6 cut(s) 1333, 1401, 1704, 1738, 2116, 2512
BspEI TCCGGA 1 cut(s) 251
BspHI TCATGA 1 cut(s) 820
BspLI GGNNCC 8 cut(s) 100, 1045, 1312, 1350, 1717, 2404, 2803, 3076
BspMAI CTGCAG 2 cut(s) 1987, 2857
BspT104I TTCGAA 1 cut(s) 2617
BspT107I GGYRCC 3 cut(s) 1043, 1310, 3074
BspTI CTTAAG 2 cut(s) 299, 323
BspTNI GGTCTC 3 cut(s) 214, 1934, 2141
BsrBI CCGCTC 1 cut(s) 1154
BsrDI GCAATG 1 cut(s) 3106
BsrGI TGTACA 1 cut(s) 1957
BssECI CCNNGG 5 cut(s) 840, 981, 1224, 2105, 2910
BssNAI GTATAC 1 cut(s) 2666
BssNI GRCGYC 1 cut(s) 1906
BssSI CACGAG 1 cut(s) 1155
BssT1I CCWWGG 5 cut(s) 840, 981, 1224, 2105, 2910
Bst1107I GTATAC 1 cut(s) 2666
Bst2BI CACGAG 1 cut(s) 1155
Bst6I CTCTTC 4 cut(s) 1189, 1821, 2442, 3027
BstACI GRCGYC 1 cut(s) 1906
BstAFI CTTAAG 2 cut(s) 299, 323
BstAPI GCANNNNNTGC 2 cut(s) 2578, 3113
BstAUI TGTACA 1 cut(s) 1957
BstBAI YACGTR 1 cut(s) 1178
BstBI TTCGAA 1 cut(s) 2617
BstC8I GCNNGC 9 cut(s) 306, 399, 1146, 1486, 2127, 2235, 2760, 2812, 2956
BstDSI CCRYGG 1 cut(s) 981
BstENI CCTNNNNNAGG 2 cut(s) 965, 2782
BstHHI GCGC 1 cut(s) 427
BstMAI GTCTC 5 cut(s) 214, 914, 1868, 1934, 2141
BstMCI CGRYCG 1 cut(s) 2117
BstNSI RCATGY 5 cut(s) 64, 770, 787, 1964, 2171
BstSFI CTRYAG 6 cut(s) 456, 588, 1983, 2240, 2853, 2865
BstSLI GKGCMC 1 cut(s) 1048
BstV1I GCAGC 7 cut(s) 307, 605, 653, 1099, 1780, 2116, 2236
BstV2I GAAGAC 3 cut(s) 240, 1539, 2984
BstX2I RGATCY 7 cut(s) 51, 1037, 1348, 1511, 1676, 2336, 2656
BstYI RGATCY 7 cut(s) 51, 1037, 1348, 1511, 1676, 2336, 2656
BstZ17I GTATAC 1 cut(s) 2666
BstZI CGGCCG 1 cut(s) 2114
Bsu36I CCTNAGG 2 cut(s) 1710, 3009
BsuI GTATCC 1 cut(s) 1843
BsuRI GGCC 6 cut(s) 1333, 1401, 1704, 1738, 2116, 2512
BtgI CCRYGG 1 cut(s) 981
BtsI GCAGTG 1 cut(s) 978
BtsIMutI CAGTG 5 cut(s) 339, 513, 978, 2556, 2820
Cac8I GCNNGC 9 cut(s) 306, 399, 1146, 1486, 2127, 2235, 2760, 2812, 2956
CaiI CAGNNNCTG 1 cut(s) 1295
CciI TCATGA 1 cut(s) 820
CfoI GCGC 1 cut(s) 427
Cfr13I GGNCC 2 cut(s) 694, 1332
CseI GACGC 1 cut(s) 1914
Csp6I GTAC 6 cut(s) 926, 958, 987, 1311, 1958, 2417
CviQI GTAC 6 cut(s) 926, 958, 987, 1311, 1958, 2417
DraIII CACNNNGTG 1 cut(s) 2578
DrdI GACNNNNNNGTC 1 cut(s) 268
DriI GACNNNNNGTC 1 cut(s) 37
DseDI GACNNNNNNGTC 1 cut(s) 268
EaeI YGGCCR 4 cut(s) 1702, 1736, 2114, 2510
EagI CGGCCG 1 cut(s) 2114
Eam1104I CTCTTC 4 cut(s) 1189, 1821, 2442, 3027
Eam1105I GACNNNNNGTC 1 cut(s) 37
EarI CTCTTC 4 cut(s) 1189, 1821, 2442, 3027
Ecl136II GAGCTC 1 cut(s) 349
EclXI CGGCCG 1 cut(s) 2114
Eco130I CCWWGG 5 cut(s) 840, 981, 1224, 2105, 2910
Eco24I GRGCYC 1 cut(s) 351
Eco31I GGTCTC 3 cut(s) 214, 1934, 2141
Eco32I GATATC 1 cut(s) 2790
Eco47I GGWCC 1 cut(s) 694
Eco52I CGGCCG 1 cut(s) 2114
Eco53kI GAGCTC 1 cut(s) 349
Eco57I CTGAAG 4 cut(s) 1107, 1551, 1845, 2352
Eco81I CCTNAGG 2 cut(s) 1710, 3009
Eco88I CYCGRG 2 cut(s) 47, 2210
EcoICRI GAGCTC 1 cut(s) 349
EcoNI CCTNNNNNAGG 2 cut(s) 965, 2782
EcoRI GAATTC 1 cut(s) 86
EcoRV GATATC 1 cut(s) 2790
EcoT14I CCWWGG 5 cut(s) 840, 981, 1224, 2105, 2910
EcoT22I ATGCAT 1 cut(s) 1458
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 5 cut(s) 840, 981, 1224, 2105, 2910
FaqI GGGAC 5 cut(s) 1483, 1917, 2092, 2183, 2688
FauI CCCGC 1 cut(s) 2295
FauNDI CATATG 1 cut(s) 480
FbaI TGATCA 3 cut(s) 1057, 1996, 2053
FblI GTMKAC 1 cut(s) 2665
Fnu4HI GCNGC 9 cut(s) 296, 594, 642, 1113, 1794, 2114, 2130, 2225, 2513
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 9 cut(s) 296, 594, 642, 1113, 1794, 2114, 2130, 2225, 2513
FspBI CTAG 5 cut(s) 56, 525, 1911, 2316, 2793
GlaI GCGC 1 cut(s) 426
GluI GCNGC 9 cut(s) 296, 594, 642, 1113, 1794, 2114, 2130, 2225, 2513
GsuI CTGGAG 1 cut(s) 2820
HaeIII GGCC 6 cut(s) 1333, 1401, 1704, 1738, 2116, 2512
HapII CCGG 3 cut(s) 252, 539, 1402
HgaI GACGC 1 cut(s) 1914
HhaI GCGC 1 cut(s) 427
Hin1I GRCGYC 1 cut(s) 1906
Hin6I GCGC 1 cut(s) 425
HinP1I GCGC 1 cut(s) 425
HincII GTYRAC 1 cut(s) 2928
HindII GTYRAC 1 cut(s) 2928
HindIII AAGCTT 1 cut(s) 2123
HpaII CCGG 3 cut(s) 252, 539, 1402
HphI GGTGA 4 cut(s) 1099, 2184, 2954, 3123
Hpy166II GTNNAC 4 cut(s) 1523, 1838, 2666, 2928
Hpy8I GTNNAC 4 cut(s) 1523, 1838, 2666, 2928
HpyCH4IV ACGT 3 cut(s) 1177, 2296, 2525
HpySE526I ACGT 3 cut(s) 1177, 2296, 2525
Hsp92I GRCGYC 1 cut(s) 1906
HspAI GCGC 1 cut(s) 425
Kpn2I TCCGGA 1 cut(s) 251
KpnI GGTACC 1 cut(s) 1314
Ksp22I TGATCA 3 cut(s) 1057, 1996, 2053
LmnI GCTCC 5 cut(s) 292, 354, 1390, 2317, 2801
Lsp1109I GCAGC 7 cut(s) 307, 605, 653, 1099, 1780, 2116, 2236
LweI GCATC 9 cut(s) 412, 512, 678, 1099, 1443, 1691, 2299, 2692, 3103
MaeI CTAG 5 cut(s) 56, 525, 1911, 2316, 2793
MaeII ACGT 3 cut(s) 1177, 2296, 2525
MbiI CCGCTC 1 cut(s) 1154
MfeI CAATTG 1 cut(s) 1128
MflI RGATCY 7 cut(s) 51, 1037, 1348, 1511, 1676, 2336, 2656
MhlI GDGCHC 4 cut(s) 351, 1048, 1252, 1819
MlsI TGGCCA 1 cut(s) 1704
MluNI TGGCCA 1 cut(s) 1704
MlyI GAGTC 7 cut(s) 1175, 1588, 2023, 2027, 2198, 2756, 2984
MmeI TCCRAC 3 cut(s) 360, 780, 3120
Mox20I TGGCCA 1 cut(s) 1704
Mph1103I ATGCAT 1 cut(s) 1458
MroI TCCGGA 1 cut(s) 251
MroXI GAANNNNTTC 2 cut(s) 86, 834
MscI TGGCCA 1 cut(s) 1704
MslI CAYNNNNRTG 4 cut(s) 483, 765, 825, 1065
Msp20I TGGCCA 1 cut(s) 1704
MspA1I CMGCKG 3 cut(s) 1484, 1793, 2810
MspCI CTTAAG 2 cut(s) 299, 323
MspI CCGG 3 cut(s) 252, 539, 1402
MunI CAATTG 1 cut(s) 1128
Mva1269I GAATGC 1 cut(s) 1456
NcoI CCATGG 1 cut(s) 981
NdeI CATATG 1 cut(s) 480
NlaIV GGNNCC 8 cut(s) 100, 1045, 1312, 1350, 1717, 2404, 2803, 3076
NmeAIII GCCGAG 1 cut(s) 2142
NmuCI GTSAC 7 cut(s) 1087, 1178, 1552, 1591, 1630, 2176, 2190
NsiI ATGCAT 1 cut(s) 1458
NspI RCATGY 5 cut(s) 64, 770, 787, 1964, 2171
NspV TTCGAA 1 cut(s) 2617
PaeR7I CTCGAG 1 cut(s) 47
PagI TCATGA 1 cut(s) 820
PciI ACATGT 3 cut(s) 60, 1960, 2167
PctI GAATGC 1 cut(s) 1456
PdmI GAANNNNTTC 2 cut(s) 86, 834
PfeI GAWTC 9 cut(s) 1070, 1081, 1235, 1304, 1423, 1721, 1865, 1979, 2648
PflFI GACNNNGTC 2 cut(s) 265, 474
PkrI GCNGC 9 cut(s) 297, 595, 643, 1114, 1795, 2115, 2131, 2226, 2514
PleI GAGTC 7 cut(s) 1175, 1588, 2023, 2026, 2197, 2755, 2984
PpsI GAGTC 7 cut(s) 1175, 1588, 2023, 2026, 2197, 2755, 2984
Ppu21I YACGTR 1 cut(s) 1178
PscI ACATGT 3 cut(s) 60, 1960, 2167
PshBI ATTAAT 2 cut(s) 449, 713
PsiI TTATAA 1 cut(s) 2586
Psp124BI GAGCTC 1 cut(s) 351
PspN4I GGNNCC 8 cut(s) 100, 1045, 1312, 1350, 1717, 2404, 2803, 3076
PspPI GGNCC 2 cut(s) 694, 1332
PstI CTGCAG 2 cut(s) 1987, 2857
PstNI CAGNNNCTG 1 cut(s) 1295
PsuI RGATCY 7 cut(s) 51, 1037, 1348, 1511, 1676, 2336, 2656
PsyI GACNNNGTC 2 cut(s) 265, 474
PvuII CAGCTG 3 cut(s) 1484, 1793, 2810
RsaI GTAC 6 cut(s) 927, 959, 988, 1312, 1959, 2418
RsaNI GTAC 6 cut(s) 926, 958, 987, 1311, 1958, 2417
RseI CAYNNNNRTG 4 cut(s) 483, 765, 825, 1065
SacI GAGCTC 1 cut(s) 351
SatI GCNGC 9 cut(s) 296, 594, 642, 1113, 1794, 2114, 2130, 2225, 2513
Sau96I GGNCC 2 cut(s) 694, 1332
ScaI AGTACT 1 cut(s) 927
SchI GAGTC 7 cut(s) 1175, 1588, 2023, 2027, 2198, 2756, 2984
SduI GDGCHC 4 cut(s) 351, 1048, 1252, 1819
SfaNI GCATC 9 cut(s) 412, 512, 678, 1099, 1443, 1691, 2299, 2692, 3103
SfcI CTRYAG 6 cut(s) 456, 588, 1983, 2240, 2853, 2865
Sfr274I CTCGAG 1 cut(s) 47
SfuI TTCGAA 1 cut(s) 2617
SinI GGWCC 1 cut(s) 694
SlaI CTCGAG 1 cut(s) 47
SmiMI CAYNNNNRTG 4 cut(s) 483, 765, 825, 1065
SmlI CTYRAG 4 cut(s) 47, 287, 299, 323
SmoI CTYRAG 4 cut(s) 47, 287, 299, 323
SsiI CCGC 6 cut(s) 1152, 2113, 2302, 2479, 2513, 2731
SspI AATATT 1 cut(s) 734
SspMI CTAG 5 cut(s) 56, 525, 1911, 2316, 2793
SstI GAGCTC 1 cut(s) 351
StyI CCWWGG 5 cut(s) 840, 981, 1224, 2105, 2910
TaiI ACGT 3 cut(s) 1180, 2299, 2528
TaqI TCGA 4 cut(s) 48, 930, 1577, 2617
TatI WGTACW 2 cut(s) 925, 1957
TauI GCSGC 2 cut(s) 2116, 2515
TfiI GAWTC 9 cut(s) 1070, 1081, 1235, 1304, 1423, 1721, 1865, 1979, 2648
TscAI CASTG 5 cut(s) 346, 520, 978, 2563, 2827
TseFI GTSAC 7 cut(s) 1087, 1178, 1552, 1591, 1630, 2176, 2190
TseI GCWGC 7 cut(s) 295, 593, 641, 1112, 1793, 2129, 2224
Tsp45I GTSAC 7 cut(s) 1087, 1178, 1552, 1591, 1630, 2176, 2190
TspGWI ACGGA 3 cut(s) 24, 1261, 2945
TspRI CASTG 5 cut(s) 346, 520, 978, 2563, 2827
Tth111I GACNNNGTC 2 cut(s) 265, 474
Vha464I CTTAAG 2 cut(s) 299, 323
VpaK11BI GGWCC 1 cut(s) 694
VspI ATTAAT 2 cut(s) 449, 713
XagI CCTNNNNNAGG 2 cut(s) 965, 2782
XapI RAATTY 7 cut(s) 86, 573, 816, 834, 855, 1411, 1916
XbaI TCTAGA 1 cut(s) 2792
XceI RCATGY 5 cut(s) 64, 770, 787, 1964, 2171
XcmI CCANNNNNNNNNTGG 2 cut(s) 1037, 1342
XhoI CTCGAG 1 cut(s) 47
XmiI GTMKAC 1 cut(s) 2665
XmnI GAANNNNTTC 2 cut(s) 86, 834
XspI CTAG 5 cut(s) 56, 525, 1911, 2316, 2793
ZrmI AGTACT 1 cut(s) 927
Zsp2I ATGCAT 1 cut(s) 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.