RLG00000019309

Sister chromatid cohesion protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001637
Physical Location & Seq
Reverse (-)
50091157 .. 50100524
9368 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019309

Sequence Viewer

Length: 2892 bp
ATGTCTTCCTCTAAGAAAGAGCTTGAGGAGCAGCTTAAGCAGGCTGGACATTCTCTCCTTAAGCCTTCTTCCAACACTGATGAGCTCCTTAAACTTCTTGATGAAGTTGAGGATTTGTTGTCAGATGTGGGGCAAGCACCATCTACATCCCTGCAAGATGCGCTTCTACCCACAATGACAGCATTAATCTCTACAGAACTGTTACGACACAGTGATATGGATGTGAAAGTTTCTGTTGCATCATGTATCACTGAGATTACTAGAATAACAGCACCGGAAGCCCCATACAACGATGAACAAATGAAGGAAATATTTAAGCTGACTGTAGCAGCTTTTGAAAACTTGGCACATCTATCCAGTCGCTCTTACAAAAAGGCAGCTTCCATTCTAAGAGTTGTTGCGAAGGTCAGGTCAAGTGTGATGATGCTGGACCTCGACTGTTACACATTAATTGCTGAGATGTTTCAACATTTCCTAAATATAATCCAGTCCAACCATCCACATGCTGTATTTTCAGACATGCAAACTATTATGACAATGGTTTTAGATGAAATTCATGAAAGTGAAGAAATTCCCTTGGAACTTCTCAAAATTCTTTTATCAAGCGTTAGAAAGGAAAATCAGAATGTTTCACCTTTTTCTTGGAAATTGGGGGAGACAGTGCTTGATAATTGTTCTGCTAAGGTTAAACCGTTTCTCATGGAGGCAGTGAAGTCCATGGGTACTGCTATGGACGATTATGCTCATATAGTAGCTTCTATATGCCAAAATGGATCTGGTGCCCTCAAACTTGATCATGTCAATGATTCTGCAAAGAATCTGGTGACAGAGGTAGTTACTGCCGATGCTGCTTGTCCGACAGCAGTTGACAAATCTGTGCCTGCTTCCGCTCGTGATGAACATAAAGTTTTACGTGACTCTTCTAAAACATTACAGCGTTGTCATCTTACTAAACATTCCAAGGAGGTTGATTCACTAGATGGTGCTCAACCCGACAAAACATTCTCTGTGAAGGCTGTCAAATCAGTAACTGAGCTAGATTCAGGTACCAAAAAGAAAGCCAAAAGGCCCAGTTCTTCAATGGATCCAGAGGAAAAATCAGAAATTGAGCCATATTCAGCTCCAAAAAAGAGAGGCCGGAAGCCAAATTCTTTAATGAATCCAGAGGAAGGCTACGAGAATTATTGGATGCATTCTGGAAAAAAATCTCCAAAATCAGCTGGCAACAGGAAGTCCCATGAAAAGGGATCTAATAGTTTACCTACTGAAGACCATCTTCGTTTGAAGGTCACTTTGTCATCCACTTTGCCATCGACACTTAAAGAAGTGACTCAGCCATCCACTTTGCCATCTACACATCAAAAAGTGACTGAGCCACCAAATGCTCAACCTAAAACAGAAGGGGAGATAGGATCTGCATCTTCATTTCTACAAAATGGCCATCCTGAGGGAACCGAATCCAGAAGGGGTCGGCCAAAGAAGCAAGTAGCCGTAGCACAACAAGATGCTAATCCTACTTCCCTTTCAGCTGCAAAGGGAGATTTTTCGAGTGCTCGGGCTGAAGAGAAAAGTCCACGATCAATGGATACCTTGAATATGGAATCTAAGGAGACGAGTAGCTTAAAAGCAAAATCACGGGGACGCCCTAGAAAATTTCGTGCCAAAACAAATGATGAGACCATTATTGCTTCTGTACATGTTGGCACAGAGAAGGAATCTACAGTTCCATGTGATCCGGAGGAAAAACAACAAGAGTCAGCTTTGACTCTTGGAACTGGGAATATCAATGATCAGTCAGCTGTGCAAAATGTTGGGACTGGGAATATGAGTGAAACAAAACCAAGGGGGCGGCCAAGAAAGCTTGCTGCAAAAATAAATCAGGAGACCTTTCTTGCTTCTGAACATGTAGTAGTCACAGAAAAAGAGTCACTAGTCCCATGTGATCCCGAGCAAAAACGGCAGCAAGAGCCAGCTCTACAGTATGAAACTGGGAGTATTAACGATCAATCAGCTATAAAGGGTATCAAGAAACGTAGGCGGGATGCTGCTCCTAGTAAAGATAGTGCTGAAGGATCTCTTAGCAAGAAGTTTTCCAAGTGTGAGGCAAAATTGGAGGGAGATAAAAATGTTGTTGAAGGGACCCCTAAGATTGTACGCAAGAGGAAGCGTTCCATTGGAAAGGAAGAGGCTAATCCAATGCCCGATCCTGATGACCGCTTAGTTGGCAAAGGAATAAAGGTTTGGTGGCCGCACGACAAAACGTTTTATGATGGTGTTGTTTGTTCCTATGACGCTGTTAAAAAGAAGCACTTGGTGCTTTATAATGATGGGGAGAAAGAAAACCTGAACCTTCGAAAGCAACGGTGGCAACTGATTGGAGATGATTCAAAAGATCCATGTATACAACTGGGACCAAAAAGCGATACACCAAAGACTGATGCTTCTGACATACCACAAAAGAGGAAGCGGAAAGCAAAATCAGAGTCATCTAAGCAAGCAAATGCTGGTTTCTCCTTGAAAAGGATATCTAGAACTGGAGCCTCAGCTGGCTTATCTACTGTTGAGCGTATGAAGTCTGACAGTAAATCTGCAGACCGTTCTACAGTTAGTGAGCCTATTAAAGATGAAACACGGGATGACAAGTCCAAGGAAATTGACAGGTTGACGGATGATGAAGGTGAAATATATGCTGGCAAGTTGAAGGCAGATATGAAGACTGGTATTGACTCTACACAGATCACACCTGAGGCTATGACCTTGTCTAAGGAAGAGAGTGCAAAAGTTGATATTGAACCCTCTGTTAGTGATGGTGCTAAAGAAATGAAAGAATTGAGCAATGGTGCAAAGGATGCAAGTTCCTCCGCTTCACCTGTGTTGGACAAGGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PEARLI-4

Protein Analysis

964

Amino Acids

105.69

Weight (kDa)

8.18

Isoelectric Point (pI)

46.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 232 1.4e-47 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2322
Acc65I GGTACC 1 cut(s) 1046
AccB1I GGYRCC 2 cut(s) 779, 1046
AccBSI CCGCTC 1 cut(s) 890
AccI GTMKAC 1 cut(s) 2401
AccIII TCCGGA 1 cut(s) 1735
AciI CCGC 7 cut(s) 888, 1849, 2038, 2215, 2249, 2467, 2862
AclI AACGTT 1 cut(s) 2261
AcoI YGGCCR 4 cut(s) 1438, 1472, 1850, 2246
AcsI RAATTY 5 cut(s) 552, 570, 591, 1147, 1652
AcuI CTGAAG 3 cut(s) 1287, 1581, 2088
AcyI GRCGYC 1 cut(s) 1642
AdeI CACNNNGTG 1 cut(s) 2314
AfaI GTAC 4 cut(s) 724, 1048, 1695, 2154
AfiI CCNNNNNNNGG 4 cut(s) 1169, 1243, 1447, 2520
AflII CTTAAG 2 cut(s) 35, 59
AflIII ACRYGT 2 cut(s) 1696, 1903
AhlI ACTAGT 1 cut(s) 1930
AjuI GAANNNNNNNTTGG 2 cut(s) 2224, 2256
Alw21I GWGCWC 3 cut(s) 87, 988, 1555
Alw26I GTCTC 4 cut(s) 650, 1604, 1670, 1877
AlwNI CAGNNNCTG 1 cut(s) 1031
Ama87I CYCGRG 2 cut(s) 1554, 1946
Aor13HI TCCGGA 1 cut(s) 1735
AoxI GGCC 6 cut(s) 1067, 1135, 1438, 1472, 1850, 2246
ApeKI GCWGC 8 cut(s) 31, 329, 377, 848, 1529, 1865, 1960, 2045
ApoI RAATTY 5 cut(s) 552, 570, 591, 1147, 1652
ArsI GACNNNNNNTTYG 4 cut(s) 395, 427, 2468, 2500
AseI ATTAAT 2 cut(s) 185, 449
Asp700I GAANNNNTTC 1 cut(s) 570
Asp718I GGTACC 1 cut(s) 1046
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 4 cut(s) 430, 1068, 2139, 2411
AsuHPI GGTGA 4 cut(s) 624, 835, 2690, 2859
AsuII TTCGAA 1 cut(s) 2353
AvaI CYCGRG 2 cut(s) 1554, 1946
AvaII GGWCC 3 cut(s) 430, 2139, 2411
AxyI CCTNAGG 2 cut(s) 1446, 2745
BaeGI GKGCMC 1 cut(s) 784
BalI TGGCCA 1 cut(s) 1440
BamHI GGATCC 1 cut(s) 1084
BanI GGYRCC 2 cut(s) 779, 1046
BanII GRGCYC 1 cut(s) 87
BauI CACGAG 1 cut(s) 891
BbsI GAAGAC 2 cut(s) 1275, 2720
Bbv12I GWGCWC 3 cut(s) 87, 988, 1555
BbvCI CCTCAGC 1 cut(s) 2542
BbvI GCAGC 8 cut(s) 43, 341, 389, 835, 1516, 1852, 1972, 2032
BceAI ACGGC 2 cut(s) 1475, 1973
BciVI GTATCC 1 cut(s) 1579
BclI TGATCA 2 cut(s) 793, 1789
BcoDI GTCTC 4 cut(s) 650, 1604, 1670, 1877
BcuI ACTAGT 1 cut(s) 1930
BfaI CTAG 7 cut(s) 261, 977, 1037, 1647, 1931, 2052, 2529
BfmI CTRYAG 6 cut(s) 192, 324, 1719, 1976, 2589, 2601
BfrI CTTAAG 2 cut(s) 35, 59
BfuI GTATCC 1 cut(s) 1579
Bme18I GGWCC 3 cut(s) 430, 2139, 2411
BmeT110I CYCGRG 2 cut(s) 1554, 1946
BmgT120I GGNCC 4 cut(s) 430, 1068, 2139, 2411
BmiI GGNNCC 8 cut(s) 781, 1048, 1086, 1453, 2140, 2141, 2412, 2539
BmrI ACTGGG 5 cut(s) 1065, 1785, 1827, 1998, 2417
BmuI ACTGGG 5 cut(s) 1065, 1785, 1827, 1998, 2417
BpiI GAAGAC 2 cut(s) 1275, 2720
BpmI CTGGAG 1 cut(s) 2556
Bpu10I CCTNAGC 2 cut(s) 681, 2542
Bpu14I TTCGAA 1 cut(s) 2353
BpuEI CTTGAG 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 914
BsaBI GATNNNNATC 2 cut(s) 1417, 1509
BsaHI GRCGYC 1 cut(s) 1642
BsaI GGTCTC 2 cut(s) 1670, 1877
BsaJI CCNNGG 5 cut(s) 576, 717, 960, 1841, 2646
BsaWI WCCGGW 2 cut(s) 274, 1735
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bsc4I CCNNNNNNNGG 4 cut(s) 1169, 1243, 1447, 2520
Bse1I ACTGG 9 cut(s) 357, 487, 1071, 1780, 1822, 1993, 2412, 2539, 2722
Bse21I CCTNAGG 2 cut(s) 1446, 2745
Bse3DI GCAATG 1 cut(s) 2842
Bse8I GATNNNNATC 2 cut(s) 1417, 1509
BseAI TCCGGA 1 cut(s) 1735
BseDI CCNNGG 5 cut(s) 576, 717, 960, 1841, 2646
BseJI GATNNNNATC 2 cut(s) 1417, 1509
BseLI CCNNNNNNNGG 4 cut(s) 1169, 1243, 1447, 2520
BseMI GCAATG 1 cut(s) 2842
BseMII CTCAG 8 cut(s) 243, 447, 1023, 1346, 1362, 1437, 2556, 2736
BseNI ACTGG 9 cut(s) 357, 487, 1071, 1780, 1822, 1993, 2412, 2539, 2722
BseRI GAGGAG 1 cut(s) 41
BseSI GKGCMC 1 cut(s) 784
BseXI GCAGC 8 cut(s) 43, 341, 389, 835, 1516, 1852, 1972, 2032
BshFI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
BshNI GGYRCC 2 cut(s) 779, 1046
BsiHKAI GWGCWC 3 cut(s) 87, 988, 1555
BsiHKCI CYCGRG 2 cut(s) 1554, 1946
BsiSI CCGG 3 cut(s) 275, 1138, 1736
BslFI GGGAC 6 cut(s) 1219, 1653, 1828, 1919, 2152, 2424
BslI CCNNNNNNNGG 4 cut(s) 1169, 1243, 1447, 2520
BsmAI GTCTC 4 cut(s) 650, 1604, 1670, 1877
BsmBI CGTCTC 1 cut(s) 1604
BsmFI GGGAC 6 cut(s) 1219, 1653, 1828, 1919, 2152, 2424
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
Bso31I GGTCTC 2 cut(s) 1670, 1877
BsoBI CYCGRG 2 cut(s) 1554, 1946
Bsp119I TTCGAA 1 cut(s) 2353
Bsp1286I GDGCHC 4 cut(s) 87, 784, 988, 1555
Bsp13I TCCGGA 1 cut(s) 1735
Bsp1407I TGTACA 1 cut(s) 1693
Bsp19I CCATGG 1 cut(s) 717
BspACI CCGC 7 cut(s) 888, 1849, 2038, 2215, 2249, 2467, 2862
BspANI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
BspCNI CTCAG 8 cut(s) 244, 448, 1024, 1345, 1363, 1438, 2555, 2737
BspEI TCCGGA 1 cut(s) 1735
BspHI TCATGA 1 cut(s) 556
BspLI GGNNCC 8 cut(s) 781, 1048, 1086, 1453, 2140, 2141, 2412, 2539
BspMAI CTGCAG 1 cut(s) 2593
BspT104I TTCGAA 1 cut(s) 2353
BspT107I GGYRCC 2 cut(s) 779, 1046
BspTI CTTAAG 2 cut(s) 35, 59
BspTNI GGTCTC 2 cut(s) 1670, 1877
BsrBI CCGCTC 1 cut(s) 890
BsrDI GCAATG 1 cut(s) 2842
BsrGI TGTACA 1 cut(s) 1693
BsrI ACTGG 9 cut(s) 357, 487, 1071, 1780, 1822, 1993, 2412, 2539, 2722
BssECI CCNNGG 5 cut(s) 576, 717, 960, 1841, 2646
BssNAI GTATAC 1 cut(s) 2402
BssNI GRCGYC 1 cut(s) 1642
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 5 cut(s) 576, 717, 960, 1841, 2646
Bst1107I GTATAC 1 cut(s) 2402
Bst2BI CACGAG 1 cut(s) 891
Bst6I CTCTTC 4 cut(s) 925, 1557, 2178, 2763
BstACI GRCGYC 1 cut(s) 1642
BstAFI CTTAAG 2 cut(s) 35, 59
BstAPI GCANNNNNTGC 2 cut(s) 2314, 2849
BstAUI TGTACA 1 cut(s) 1693
BstBAI YACGTR 1 cut(s) 914
BstBI TTCGAA 1 cut(s) 2353
BstC8I GCNNGC 9 cut(s) 42, 135, 882, 1222, 1863, 1971, 2496, 2548, 2692
BstDSI CCRYGG 1 cut(s) 717
BstENI CCTNNNNNAGG 1 cut(s) 2518
BstHHI GCGC 1 cut(s) 163
BstMAI GTCTC 4 cut(s) 650, 1604, 1670, 1877
BstNSI RCATGY 4 cut(s) 506, 523, 1700, 1907
BstSFI CTRYAG 6 cut(s) 192, 324, 1719, 1976, 2589, 2601
BstSLI GKGCMC 1 cut(s) 784
BstV1I GCAGC 8 cut(s) 43, 341, 389, 835, 1516, 1852, 1972, 2032
BstV2I GAAGAC 2 cut(s) 1275, 2720
BstX2I RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
BstYI RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
BstZ17I GTATAC 1 cut(s) 2402
Bsu36I CCTNAGG 2 cut(s) 1446, 2745
BsuI GTATCC 1 cut(s) 1579
BsuRI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
BtgI CCRYGG 1 cut(s) 717
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 5 cut(s) 75, 217, 249, 666, 714
Cac8I GCNNGC 9 cut(s) 42, 135, 882, 1222, 1863, 1971, 2496, 2548, 2692
CaiI CAGNNNCTG 1 cut(s) 1031
CciI TCATGA 1 cut(s) 556
CfoI GCGC 1 cut(s) 163
Cfr13I GGNCC 4 cut(s) 430, 1068, 2139, 2411
CseI GACGC 2 cut(s) 1650, 2300
Csp6I GTAC 4 cut(s) 723, 1047, 1694, 2153
CviQI GTAC 4 cut(s) 723, 1047, 1694, 2153
DraIII CACNNNGTG 1 cut(s) 2314
EaeI YGGCCR 4 cut(s) 1438, 1472, 1850, 2246
Eam1104I CTCTTC 4 cut(s) 925, 1557, 2178, 2763
EarI CTCTTC 4 cut(s) 925, 1557, 2178, 2763
Ecl136II GAGCTC 1 cut(s) 85
Eco130I CCWWGG 5 cut(s) 576, 717, 960, 1841, 2646
Eco24I GRGCYC 1 cut(s) 87
Eco31I GGTCTC 2 cut(s) 1670, 1877
Eco32I GATATC 1 cut(s) 2526
Eco47I GGWCC 3 cut(s) 430, 2139, 2411
Eco53kI GAGCTC 1 cut(s) 85
Eco57I CTGAAG 3 cut(s) 1287, 1581, 2088
Eco81I CCTNAGG 2 cut(s) 1446, 2745
Eco88I CYCGRG 2 cut(s) 1554, 1946
EcoICRI GAGCTC 1 cut(s) 85
EcoNI CCTNNNNNAGG 1 cut(s) 2518
EcoO109I RGGNCCY 1 cut(s) 2139
EcoRV GATATC 1 cut(s) 2526
EcoT14I CCWWGG 5 cut(s) 576, 717, 960, 1841, 2646
EcoT22I ATGCAT 1 cut(s) 1194
EcoT38I GRGCYC 1 cut(s) 87
ErhI CCWWGG 5 cut(s) 576, 717, 960, 1841, 2646
Esp3I CGTCTC 1 cut(s) 1604
FalI AAGNNNNNCTT 8 cut(s) 147, 179, 1260, 1292, 2061, 2093, 2294, 2326
FaqI GGGAC 6 cut(s) 1219, 1653, 1828, 1919, 2152, 2424
FauI CCCGC 1 cut(s) 2031
FbaI TGATCA 2 cut(s) 793, 1789
FblI GTMKAC 1 cut(s) 2401
FriOI GRGCYC 1 cut(s) 87
FspBI CTAG 7 cut(s) 261, 977, 1037, 1647, 1931, 2052, 2529
GlaI GCGC 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 2556
HaeIII GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
HapII CCGG 3 cut(s) 275, 1138, 1736
HgaI GACGC 2 cut(s) 1650, 2300
HhaI GCGC 1 cut(s) 163
Hin1I GRCGYC 1 cut(s) 1642
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HincII GTYRAC 2 cut(s) 868, 2664
HindII GTYRAC 2 cut(s) 868, 2664
HindIII AAGCTT 1 cut(s) 1859
HpaII CCGG 3 cut(s) 275, 1138, 1736
HphI GGTGA 4 cut(s) 624, 835, 2690, 2859
Hpy166II GTNNAC 5 cut(s) 868, 1259, 1574, 2402, 2664
Hpy188I TCNGA 9 cut(s) 124, 517, 624, 858, 1102, 1900, 2446, 2482, 2578
Hpy8I GTNNAC 5 cut(s) 868, 1259, 1574, 2402, 2664
HpyCH4IV ACGT 3 cut(s) 913, 2032, 2261
HpySE526I ACGT 3 cut(s) 913, 2032, 2261
Hsp92I GRCGYC 1 cut(s) 1642
HspAI GCGC 1 cut(s) 161
KflI GGGWCCC 1 cut(s) 2139
Kpn2I TCCGGA 1 cut(s) 1735
KpnI GGTACC 1 cut(s) 1050
Ksp22I TGATCA 2 cut(s) 793, 1789
LmnI GCTCC 5 cut(s) 28, 90, 1126, 2053, 2537
Lsp1109I GCAGC 8 cut(s) 43, 341, 389, 835, 1516, 1852, 1972, 2032
MaeI CTAG 7 cut(s) 261, 977, 1037, 1647, 1931, 2052, 2529
MaeII ACGT 3 cut(s) 913, 2032, 2261
MbiI CCGCTC 1 cut(s) 890
MflI RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
MhlI GDGCHC 4 cut(s) 87, 784, 988, 1555
MlsI TGGCCA 1 cut(s) 1440
MluNI TGGCCA 1 cut(s) 1440
MlyI GAGTC 7 cut(s) 911, 1324, 1759, 1763, 1934, 2492, 2720
MmeI TCCRAC 4 cut(s) 96, 516, 881, 2856
Mox20I TGGCCA 1 cut(s) 1440
Mph1103I ATGCAT 1 cut(s) 1194
MroI TCCGGA 1 cut(s) 1735
MroXI GAANNNNTTC 1 cut(s) 570
MscI TGGCCA 1 cut(s) 1440
MslI CAYNNNNRTG 3 cut(s) 501, 561, 801
Msp20I TGGCCA 1 cut(s) 1440
MspA1I CMGCKG 4 cut(s) 1220, 1529, 1799, 2546
MspCI CTTAAG 2 cut(s) 35, 59
MspI CCGG 3 cut(s) 275, 1138, 1736
Mva1269I GAATGC 1 cut(s) 1192
NcoI CCATGG 1 cut(s) 717
NlaIV GGNNCC 8 cut(s) 781, 1048, 1086, 1453, 2140, 2141, 2412, 2539
NmuCI GTSAC 7 cut(s) 823, 914, 1288, 1327, 1366, 1912, 1926
NsiI ATGCAT 1 cut(s) 1194
NspI RCATGY 4 cut(s) 506, 523, 1700, 1907
NspV TTCGAA 1 cut(s) 2353
PagI TCATGA 1 cut(s) 556
PciI ACATGT 2 cut(s) 1696, 1903
PctI GAATGC 1 cut(s) 1192
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 9 cut(s) 806, 817, 971, 1040, 1159, 1457, 1601, 1715, 2384
PflFI GACNNNGTC 1 cut(s) 2758
PleI GAGTC 7 cut(s) 911, 1324, 1759, 1762, 1933, 2491, 2720
PpsI GAGTC 7 cut(s) 911, 1324, 1759, 1762, 1933, 2491, 2720
Ppu21I YACGTR 1 cut(s) 914
PpuMI RGGWCCY 1 cut(s) 2139
PscI ACATGT 2 cut(s) 1696, 1903
PshBI ATTAAT 2 cut(s) 185, 449
PsiI TTATAA 1 cut(s) 2322
Psp124BI GAGCTC 1 cut(s) 87
Psp1406I AACGTT 1 cut(s) 2261
Psp5II RGGWCCY 1 cut(s) 2139
PspN4I GGNNCC 8 cut(s) 781, 1048, 1086, 1453, 2140, 2141, 2412, 2539
PspPI GGNCC 4 cut(s) 430, 1068, 2139, 2411
PspPPI RGGWCCY 1 cut(s) 2139
PstI CTGCAG 1 cut(s) 2593
PstNI CAGNNNCTG 1 cut(s) 1031
PsuI RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
PsyI GACNNNGTC 1 cut(s) 2758
PvuII CAGCTG 4 cut(s) 1220, 1529, 1799, 2546
RsaI GTAC 4 cut(s) 724, 1048, 1695, 2154
RsaNI GTAC 4 cut(s) 723, 1047, 1694, 2153
RseI CAYNNNNRTG 3 cut(s) 501, 561, 801
SacI GAGCTC 1 cut(s) 87
Sau96I GGNCC 4 cut(s) 430, 1068, 2139, 2411
SchI GAGTC 7 cut(s) 911, 1324, 1759, 1763, 1934, 2492, 2720
SduI GDGCHC 4 cut(s) 87, 784, 988, 1555
SfcI CTRYAG 6 cut(s) 192, 324, 1719, 1976, 2589, 2601
SfuI TTCGAA 1 cut(s) 2353
SinI GGWCC 3 cut(s) 430, 2139, 2411
SmiMI CAYNNNNRTG 3 cut(s) 501, 561, 801
SmlI CTYRAG 3 cut(s) 23, 35, 59
SmoI CTYRAG 3 cut(s) 23, 35, 59
SpeI ACTAGT 1 cut(s) 1930
SsiI CCGC 7 cut(s) 888, 1849, 2038, 2215, 2249, 2467, 2862
SspI AATATT 1 cut(s) 312
SspMI CTAG 7 cut(s) 261, 977, 1037, 1647, 1931, 2052, 2529
SstI GAGCTC 1 cut(s) 87
StyI CCWWGG 5 cut(s) 576, 717, 960, 1841, 2646
TaiI ACGT 3 cut(s) 916, 2035, 2264
TaqI TCGA 4 cut(s) 435, 1313, 1547, 2353
TatI WGTACW 1 cut(s) 1693
TauI GCSGC 2 cut(s) 1852, 2251
TfiI GAWTC 9 cut(s) 806, 817, 971, 1040, 1159, 1457, 1601, 1715, 2384
TscAI CASTG 5 cut(s) 82, 217, 256, 666, 714
TseFI GTSAC 7 cut(s) 823, 914, 1288, 1327, 1366, 1912, 1926
TseI GCWGC 8 cut(s) 31, 329, 377, 848, 1529, 1865, 1960, 2045
Tsp45I GTSAC 7 cut(s) 823, 914, 1288, 1327, 1366, 1912, 1926
TspGWI ACGGA 1 cut(s) 2681
TspRI CASTG 5 cut(s) 82, 217, 256, 666, 714
Tth111I GACNNNGTC 1 cut(s) 2758
Vha464I CTTAAG 2 cut(s) 35, 59
VpaK11BI GGWCC 3 cut(s) 430, 2139, 2411
VspI ATTAAT 2 cut(s) 185, 449
XagI CCTNNNNNAGG 1 cut(s) 2518
XapI RAATTY 5 cut(s) 552, 570, 591, 1147, 1652
XbaI TCTAGA 1 cut(s) 2528
XceI RCATGY 4 cut(s) 506, 523, 1700, 1907
XcmI CCANNNNNNNNNTGG 2 cut(s) 773, 1078
XmiI GTMKAC 1 cut(s) 2401
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 7 cut(s) 261, 977, 1037, 1647, 1931, 2052, 2529
Zsp2I ATGCAT 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.