Rorug02G0310300

Belongs to the eukaryotic ribosomal protein eS12 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000474
Physical Location & Seq
Reverse (-)
35681083 .. 35689286
8204 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0310300.1

Sequence Viewer

Length: 1347 bp
ATGGGCAGTAGAACAGTGAAATTCGGTTCAAATGAACTGGTGACCGACATGCCGAGCTTTGTTAGTCCAGTACCCACTTCCAATCCCATTGGCACAGAGGGGAGCTCCATTCGTTCTTCTCGAATCTCAGACTTTGAGAGTCTTGAGCAGACTCTTGGATTTAACATAGAGGATGCTGTTGACATTGGAAGAAGTCCTGTGTATAATCAAAATAATTCAATTAGCCGGGCACCGGGAGGCAAGGATGTCCAATTTAGCACTTTAAATAAGCTGTTGCCACAAAAAGAGCTACAACCAAATCTGGTTTCAGTATCTCGTAGCAATCACGAGAACTGGGGGGAATCCAATATGGCAGATGGAAGTCCTAGGACTGATACTTCAACAGATGACACAGAGGATAAAAATCAGATGATTGAAAGGAATCAAATGACTGGTCTTCTAGCTTCAGATTCCAGTGATAGATCAAAAGAAAAACCTGGGGATCAAAAGACGCTGCGCAGGCTTGCTCAAAATCGTGAAGCTGCCAGGAAAAGCCGGTTACGAAAAAAAGCATATGTACAACAACTCGAGAGTAGCCGGTTGAAATTAACCCAGCTTGAGCAAGAACTTCAGCGTGCCCGCCAGCAGGGCATATTCATTTCAAGCTCTGGAGATCAAGCCCATTCAATGAGTGGAAATGGTGCTTTGGCATTTGATGTAGAATATGCAAGGTGGCTGGAGGAGCACAACAGGCAGATAAATGAGTTGAGGGCTGCTGTTAATTCACATGCCGGTGACACGGAACTCCGTACTGTAATTGATAATGTCATTGCTCACTATGATGACATTTTTAGACTGAAGGGCACTGCAGCAAAAGCTGATGTTTTCCACATTTTGTCAGGAATGTGGAAAACACCAGCGGAACGGTGTTTTATGTGGATTGGTGGCTTCCGCTCATCTGAGCTTTTGAAGCTTCTTGTGCGTCAATTGGAACCCCTAACGGAGCAGCAAGTGATGAATATTTACAACTTACAGCAATCATCCCAGCAGGCTGAAGATGCTTTGTCACAAGGGATGGAAGCATTACAGCAGTCACTTGCTGAGACCTTGGCCAGTGGTTCACCTGGGCCATCAGGAACATCTGGGAATGTAGCAAACTATATGGGTCAAATGGCTATGGCGATGGGAAAGCTAGGCACTCTTGAGGGGTTCCTTCGCCAGGCTGATAATCTTCGCCAGCAAACTCTGCAACAAATGCATCGTATACTGACAACTCGGCAGTCAGCTCGTGCACTTCTTGCAATCAATGATTATTTCTCGCGTCTTAGAGCCCTCAGTTCTCTTTGGCTTGCCAGGCCCCGAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Ribosomal_L7Ae

Protein Analysis

448

Amino Acids

49.9

Weight (kDa)

7.09

Isoelectric Point (pI)

63.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 163 - 203 1.2e-06 bZIP transcription factor
DOG1 PF14144 245 - 320 1.5e-32 Seed dormancy control
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000474)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45190 AT1G47450 AT1G47470 AT1G52970 AT2G04031 AT2G04037 AT2G04041 AT2G21655 AT2G21727 AT2G25482 AT3G01185 AT3G11990 AT3G29797 AT3G30247 AT4G13261 AT4G13263 AT5G35405
fragaria_vesca FvH4_3g40551
malus_domestica MD13G1274700.v1.1 MD16G1259400.v1.1
pyrus_communis pycom16g22710
rosa_chinensis RchiOBHm_Chr2g0133141 RchiOBHm_Chr5g0073261 RchiOBHm_Chr5g0073271 RchiOBHm_Chr5g0073281 RchiOBHm_Chr5g0073291 RchiOBHm_Chr5g0073301 RchiOBHm_Chr5g0073311 RchiOBHm_Chr5g0073321 RchiOBHm_Chr5g0073331 RchiOBHm_Chr5g0073341
rosa_laevigata RLG00000002208 RLG00000019311 RLG00000036377 RLG00000036378
rosa_multiflora Rmu_sc0001887.1_g000017 Rmu_sc0001997.1_g000015 Rmu_sc0001997.1_g000017 Rmu_sc0003178.1_g000007 Rmu_sc0005684.1_g000002 Rmu_sc0008365.1_g000001 Rmu_sc0008365.1_g000002 Rmu_sc0017046.1_g000005 Rmu_sc0019942.1_g000001
rosa_roxburghii Rroxscaffold_1G00007900 Rroxscaffold_1G00007930 Rroxscaffold_1G00007950
rosa_rugosa Rorug02G0310300 Rorug05G0422600 Rorug05G0422700 Rorug05G0422800.1 Rorug05G0423600 Rorug05G0423600 Rorug05G0423600 Rorug05G0597300 Rorug05G0597400
rosa_samantha Rh2AG362500 Rh2BG368100 Rh2CG338100 Rh2CG345700 Rh2DG385300 Rh2DG385400 Rh5AG479300 Rh5AG479400 Rh5AG480400 Rh5BG500000 Rh5BG500100 Rh5BG500200 Rh5BG500300 Rh5BG500400 Rh5BG500500 Rh5BG500600 Rh5BG501500 Rh5BG501600 Rh5CG168800 Rh5CG523200 Rh5CG523300 Rh5CG523400 Rh5CG523500 Rh5CG523600 Rh5CG523700 Rh5CG524600 Rh5CG524700 Rh5DG512100 Rh5DG512200 Rh5DG512400 Rh5DG513300 Rh5DG513400 Rh5DG513800 Rh7AG239000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 229
AccBSI CCGCTC 1 cut(s) 933
AccI GTMKAC 1 cut(s) 1243
AccII CGCG 1 cut(s) 1300
AciI CCGC 3 cut(s) 619, 899, 931
AclWI GGATC 1 cut(s) 489
AcoI YGGCCR 1 cut(s) 1089
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 4 cut(s) 429, 593, 857, 1053
AfaI GTAC 3 cut(s) 72, 558, 790
AfiI CCNNNNNNNGG 3 cut(s) 232, 625, 1198
AgsI TTSAA 8 cut(s) 30, 219, 381, 416, 583, 642, 666, 949
AjnI CCWGG 5 cut(s) 475, 524, 1102, 1197, 1331
AjuI GAANNNNNNNTTGG 2 cut(s) 289, 321
Alw21I GWGCWC 3 cut(s) 107, 726, 1273
Alw26I GTCTC 1 cut(s) 1076
Alw44I GTGCAC 1 cut(s) 1269
AlwI GGATC 1 cut(s) 489
Ama87I CYCGRG 2 cut(s) 566, 1338
AoxI GGCC 3 cut(s) 1089, 1106, 1334
ApaLI GTGCAC 1 cut(s) 1269
ApeKI GCWGC 5 cut(s) 493, 521, 752, 848, 985
ApoI RAATTY 1 cut(s) 20
ArsI GACNNNNNNTTYG 2 cut(s) 418, 450
AspA2I CCTAGG 1 cut(s) 365
AspLEI GCGC 1 cut(s) 498
AspS9I GGNCC 2 cut(s) 1106, 1335
AsuC2I CCSGG 2 cut(s) 227, 234
AsuHPI GGTGA 3 cut(s) 52, 785, 1092
AvaI CYCGRG 2 cut(s) 566, 1338
AvrII CCTAGG 1 cut(s) 365
BaeGI GKGCMC 4 cut(s) 232, 619, 845, 1273
BalI TGGCCA 1 cut(s) 1091
BanI GGYRCC 1 cut(s) 229
BanII GRGCYC 2 cut(s) 107, 1312
BauI CACGAG 2 cut(s) 326, 1266
BbsI GAAGAC 1 cut(s) 428
Bbv12I GWGCWC 3 cut(s) 107, 726, 1273
BbvI GCAGC 5 cut(s) 480, 508, 739, 860, 997
BccI CCATC 4 cut(s) 350, 1048, 1117, 1156
BcgI CGANNNNNNTGC 2 cut(s) 1247, 1281
BciT130I CCWGG 5 cut(s) 477, 526, 1104, 1199, 1333
BcnI CCSGG 2 cut(s) 227, 234
BcoDI GTCTC 1 cut(s) 1076
BfaI CTAG 3 cut(s) 366, 440, 1172
BfmI CTRYAG 1 cut(s) 846
BglI GCCNNNNNGGC 1 cut(s) 627
BisI GCNGC 5 cut(s) 494, 522, 753, 849, 986
BlnI CCTAGG 1 cut(s) 365
BlsI GCNGC 5 cut(s) 495, 523, 754, 850, 987
Bme1390I CCNGG 7 cut(s) 227, 234, 477, 526, 1104, 1199, 1333
BmeT110I CYCGRG 2 cut(s) 566, 1338
BmgT120I GGNCC 2 cut(s) 1106, 1335
BmiI GGNNCC 4 cut(s) 231, 972, 1190, 1337
BmrFI CCNGG 7 cut(s) 227, 234, 477, 526, 1104, 1199, 1333
BmrI ACTGGG 1 cut(s) 343
BmsI GCATC 3 cut(s) 163, 1027, 1246
BmuI ACTGGG 1 cut(s) 343
BpiI GAAGAC 1 cut(s) 428
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 2 cut(s) 669, 737
BpuEI CTTGAG 3 cut(s) 164, 617, 1202
BpuMI CCSGG 2 cut(s) 227, 234
BsaBI GATNNNNATC 1 cut(s) 402
BsaI GGTCTC 1 cut(s) 1076
BsaJI CCNNGG 4 cut(s) 365, 476, 1086, 1103
Bsc4I CCNNNNNNNGG 3 cut(s) 232, 625, 1198
Bse118I RCCGGY 3 cut(s) 534, 576, 770
Bse1I ACTGG 6 cut(s) 42, 68, 338, 436, 453, 1092
Bse3DI GCAATG 1 cut(s) 807
Bse8I GATNNNNATC 1 cut(s) 402
BseBI CCWGG 5 cut(s) 477, 526, 1104, 1199, 1333
BseDI CCNNGG 4 cut(s) 365, 476, 1086, 1103
BseGI GGATG 4 cut(s) 178, 250, 1019, 1059
BseJI GATNNNNATC 1 cut(s) 402
BseLI CCNNNNNNNGG 3 cut(s) 232, 625, 1198
BseMI GCAATG 1 cut(s) 807
BseMII CTCAG 4 cut(s) 141, 930, 1071, 1327
BseNI ACTGG 6 cut(s) 42, 68, 338, 436, 453, 1092
BseRI GAGGAG 1 cut(s) 734
BseSI GKGCMC 4 cut(s) 232, 619, 845, 1273
BseXI GCAGC 5 cut(s) 480, 508, 739, 860, 997
BseYI CCCAGC 2 cut(s) 591, 1023
Bsh1236I CGCG 1 cut(s) 1300
BshFI GGCC 3 cut(s) 1091, 1108, 1336
BshNI GGYRCC 1 cut(s) 229
BsiHKAI GWGCWC 3 cut(s) 107, 726, 1273
BsiHKCI CYCGRG 2 cut(s) 566, 1338
BsiSI CCGG 5 cut(s) 226, 233, 535, 577, 771
BslI CCNNNNNNNGG 3 cut(s) 232, 625, 1198
BsmAI GTCTC 1 cut(s) 1076
BsnI GGCC 3 cut(s) 1091, 1108, 1336
Bso31I GGTCTC 1 cut(s) 1076
BsoBI CYCGRG 2 cut(s) 566, 1338
Bsp1286I GDGCHC 7 cut(s) 107, 232, 619, 726, 845, 1273, 1312
Bsp1407I TGTACA 1 cut(s) 556
Bsp143I GATC 3 cut(s) 461, 481, 652
BspACI CCGC 3 cut(s) 619, 899, 931
BspANI GGCC 3 cut(s) 1091, 1108, 1336
BspCNI CTCAG 4 cut(s) 140, 931, 1072, 1326
BspFNI CGCG 1 cut(s) 1300
BspLI GGNNCC 4 cut(s) 231, 972, 1190, 1337
BspMAI CTGCAG 1 cut(s) 850
BspPI GGATC 1 cut(s) 489
BspT107I GGYRCC 1 cut(s) 229
BspTNI GGTCTC 1 cut(s) 1076
BsrBI CCGCTC 1 cut(s) 933
BsrDI GCAATG 1 cut(s) 807
BsrFI RCCGGY 3 cut(s) 534, 576, 770
BsrGI TGTACA 1 cut(s) 556
BsrI ACTGG 6 cut(s) 42, 68, 338, 436, 453, 1092
BssAI RCCGGY 3 cut(s) 534, 576, 770
BssECI CCNNGG 4 cut(s) 365, 476, 1086, 1103
BssMI GATC 3 cut(s) 461, 481, 652
BssNAI GTATAC 1 cut(s) 1244
BssSI CACGAG 2 cut(s) 326, 1266
BssT1I CCWWGG 2 cut(s) 365, 1086
Bst1107I GTATAC 1 cut(s) 1244
Bst2BI CACGAG 2 cut(s) 326, 1266
Bst2UI CCWGG 5 cut(s) 477, 526, 1104, 1199, 1333
Bst4CI ACNGT 3 cut(s) 16, 793, 906
BstAPI GCANNNNNTGC 3 cut(s) 1225, 1234, 1277
BstAUI TGTACA 1 cut(s) 556
BstC8I GCNNGC 8 cut(s) 500, 504, 615, 619, 623, 1029, 1217, 1329
BstDEI CTNAG 5 cut(s) 127, 939, 1080, 1304, 1313
BstEII GGTNACC 1 cut(s) 40
BstENI CCTNNNNNAGG 1 cut(s) 1196
BstF5I GGATG 4 cut(s) 178, 250, 1019, 1059
BstFNI CGCG 1 cut(s) 1300
BstHHI GCGC 1 cut(s) 498
BstKTI GATC 3 cut(s) 464, 484, 655
BstMAI GTCTC 1 cut(s) 1076
BstMBI GATC 3 cut(s) 461, 481, 652
BstNI CCWGG 5 cut(s) 477, 526, 1104, 1199, 1333
BstNSI RCATGY 2 cut(s) 52, 770
BstPI GGTNACC 1 cut(s) 40
BstSCI CCNGG 7 cut(s) 225, 232, 475, 524, 1102, 1197, 1331
BstSFI CTRYAG 1 cut(s) 846
BstSLI GKGCMC 4 cut(s) 232, 619, 845, 1273
BstUI CGCG 1 cut(s) 1300
BstV1I GCAGC 5 cut(s) 480, 508, 739, 860, 997
BstV2I GAAGAC 1 cut(s) 428
BstZ17I GTATAC 1 cut(s) 1244
BsuRI GGCC 3 cut(s) 1091, 1108, 1336
BtgZI GCGATG 1 cut(s) 1175
BtsCI GGATG 4 cut(s) 178, 250, 1019, 1059
BtsI GCAGTG 1 cut(s) 843
BtsIMutI CAGTG 4 cut(s) 21, 460, 843, 1099
Cac8I GCNNGC 8 cut(s) 500, 504, 615, 619, 623, 1029, 1217, 1329
CfoI GCGC 1 cut(s) 498
Cfr10I RCCGGY 3 cut(s) 534, 576, 770
Cfr13I GGNCC 2 cut(s) 1106, 1335
CseI GACGC 3 cut(s) 499, 950, 1289
Csp6I GTAC 3 cut(s) 71, 557, 789
CviAII CATG 2 cut(s) 49, 767
CviQI GTAC 3 cut(s) 71, 557, 789
DdeI CTNAG 5 cut(s) 127, 939, 1080, 1304, 1313
DpnI GATC 3 cut(s) 463, 483, 654
DpnII GATC 3 cut(s) 461, 481, 652
DraI TTTAAA 1 cut(s) 264
EaeI YGGCCR 1 cut(s) 1089
Ecl136II GAGCTC 1 cut(s) 105
Eco130I CCWWGG 2 cut(s) 365, 1086
Eco24I GRGCYC 2 cut(s) 107, 1312
Eco31I GGTCTC 1 cut(s) 1076
Eco53kI GAGCTC 1 cut(s) 105
Eco57I CTGAAG 4 cut(s) 429, 593, 857, 1053
Eco88I CYCGRG 2 cut(s) 566, 1338
Eco91I GGTNACC 1 cut(s) 40
EcoICRI GAGCTC 1 cut(s) 105
EcoNI CCTNNNNNAGG 1 cut(s) 1196
EcoO109I RGGNCCY 1 cut(s) 1335
EcoO65I GGTNACC 1 cut(s) 40
EcoRII CCWGG 5 cut(s) 475, 524, 1102, 1197, 1331
EcoT14I CCWWGG 2 cut(s) 365, 1086
EcoT22I ATGCAT 1 cut(s) 1239
EcoT38I GRGCYC 2 cut(s) 107, 1312
ErhI CCWWGG 2 cut(s) 365, 1086
FaeI CATG 2 cut(s) 52, 770
FatI CATG 2 cut(s) 48, 766
FauI CCCGC 1 cut(s) 626
FauNDI CATATG 1 cut(s) 553
FblI GTMKAC 1 cut(s) 1243
Fnu4HI GCNGC 5 cut(s) 494, 522, 753, 849, 986
FokI GGATG 4 cut(s) 185, 257, 1006, 1066
FriOI GRGCYC 2 cut(s) 107, 1312
Fsp4HI GCNGC 5 cut(s) 494, 522, 753, 849, 986
FspBI CTAG 3 cut(s) 366, 440, 1172
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 1 cut(s) 497
GluI GCNGC 5 cut(s) 494, 522, 753, 849, 986
GsaI CCCAGC 2 cut(s) 595, 1027
GsuI CTGGAG 2 cut(s) 669, 737
HaeIII GGCC 3 cut(s) 1091, 1108, 1336
HapII CCGG 5 cut(s) 226, 233, 535, 577, 771
HgaI GACGC 3 cut(s) 499, 950, 1289
HhaI GCGC 1 cut(s) 498
Hin1II CATG 2 cut(s) 52, 770
Hin6I GCGC 1 cut(s) 496
HinP1I GCGC 1 cut(s) 496
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 950
HinfI GANTC 6 cut(s) 123, 139, 151, 341, 421, 449
HpaII CCGG 5 cut(s) 226, 233, 535, 577, 771
HphI GGTGA 3 cut(s) 52, 785, 1092
Hpy166II GTNNAC 4 cut(s) 181, 1100, 1244, 1271
Hpy188I TCNGA 4 cut(s) 130, 408, 448, 940
Hpy188III TCNNGA 9 cut(s) 120, 143, 326, 515, 568, 648, 879, 1113, 1181
Hpy8I GTNNAC 4 cut(s) 181, 1100, 1244, 1271
HpyAV CCTTC 2 cut(s) 832, 1202
HpyCH4III ACNGT 3 cut(s) 16, 793, 906
HpyCH4V TGCA 6 cut(s) 707, 848, 1228, 1237, 1271, 1280
HpyF3I CTNAG 5 cut(s) 127, 939, 1080, 1304, 1313
Hsp92II CATG 2 cut(s) 52, 770
HspAI GCGC 1 cut(s) 496
Kzo9I GATC 3 cut(s) 461, 481, 652
LmnI GCTCC 4 cut(s) 102, 110, 721, 982
Lsp1109I GCAGC 5 cut(s) 480, 508, 739, 860, 997
LweI GCATC 3 cut(s) 163, 1027, 1246
MaeI CTAG 3 cut(s) 366, 440, 1172
MaeIII GTNAC 5 cut(s) 40, 537, 773, 1044, 1071
MalI GATC 3 cut(s) 463, 483, 654
MbiI CCGCTC 1 cut(s) 933
MboI GATC 3 cut(s) 461, 481, 652
MboII GAAGA 5 cut(s) 108, 201, 428, 1046, 1202
MfeI CAATTG 1 cut(s) 965
MhlI GDGCHC 7 cut(s) 107, 232, 619, 726, 845, 1273, 1312
MlsI TGGCCA 1 cut(s) 1091
MluCI AATT 8 cut(s) 20, 214, 219, 251, 584, 760, 795, 965
MluNI TGGCCA 1 cut(s) 1091
MlyI GAGTC 2 cut(s) 145, 148
MnlI CCTC 8 cut(s) 91, 163, 230, 388, 712, 741, 1177, 1322
Mox20I TGGCCA 1 cut(s) 1091
Mph1103I ATGCAT 1 cut(s) 1239
MscI TGGCCA 1 cut(s) 1091
MseI TTAA 4 cut(s) 162, 263, 587, 759
MslI CAYNNNNRTG 2 cut(s) 771, 819
Msp20I TGGCCA 1 cut(s) 1091
MspA1I CMGCKG 1 cut(s) 899
MspI CCGG 5 cut(s) 226, 233, 535, 577, 771
MspR9I CCNGG 7 cut(s) 227, 234, 477, 526, 1104, 1199, 1333
MunI CAATTG 1 cut(s) 965
MvaI CCWGG 5 cut(s) 477, 526, 1104, 1199, 1333
MvnI CGCG 1 cut(s) 1300
NciI CCSGG 2 cut(s) 227, 234
NdeI CATATG 1 cut(s) 553
NdeII GATC 3 cut(s) 461, 481, 652
NlaIII CATG 2 cut(s) 52, 770
NlaIV GGNNCC 4 cut(s) 231, 972, 1190, 1337
NmeAIII GCCGAG 2 cut(s) 78, 1234
NmuCI GTSAC 4 cut(s) 40, 773, 1044, 1071
NsbI TGCGCA 1 cut(s) 497
NsiI ATGCAT 1 cut(s) 1239
NspI RCATGY 2 cut(s) 52, 770
PaeR7I CTCGAG 1 cut(s) 566
PcsI WCGNNNNNNNCGW 1 cut(s) 118
PfeI GAWTC 4 cut(s) 123, 341, 421, 449
PkrI GCNGC 5 cut(s) 495, 523, 754, 850, 987
PleI GAGTC 2 cut(s) 145, 147
PpsI GAGTC 2 cut(s) 145, 147
Psp124BI GAGCTC 1 cut(s) 107
Psp6I CCWGG 5 cut(s) 475, 524, 1102, 1197, 1331
PspEI GGTNACC 1 cut(s) 40
PspFI CCCAGC 2 cut(s) 591, 1023
PspGI CCWGG 5 cut(s) 475, 524, 1102, 1197, 1331
PspN4I GGNNCC 4 cut(s) 231, 972, 1190, 1337
PspPI GGNCC 2 cut(s) 1106, 1335
PstI CTGCAG 1 cut(s) 850
RsaI GTAC 3 cut(s) 72, 558, 790
RsaNI GTAC 3 cut(s) 71, 557, 789
RseI CAYNNNNRTG 2 cut(s) 771, 819
SacI GAGCTC 1 cut(s) 107
SaqAI TTAA 4 cut(s) 162, 263, 587, 759
SatI GCNGC 5 cut(s) 494, 522, 753, 849, 986
Sau3AI GATC 3 cut(s) 461, 481, 652
Sau96I GGNCC 2 cut(s) 1106, 1335
SchI GAGTC 2 cut(s) 145, 148
ScrFI CCNGG 7 cut(s) 227, 234, 477, 526, 1104, 1199, 1333
SduI GDGCHC 7 cut(s) 107, 232, 619, 726, 845, 1273, 1312
SfaNI GCATC 3 cut(s) 163, 1027, 1246
SfcI CTRYAG 1 cut(s) 846
Sfr274I CTCGAG 1 cut(s) 566
SlaI CTCGAG 1 cut(s) 566
SmiMI CAYNNNNRTG 2 cut(s) 771, 819
SmlI CTYRAG 4 cut(s) 143, 566, 596, 1181
SmoI CTYRAG 4 cut(s) 143, 566, 596, 1181
Sse9I AATT 8 cut(s) 20, 214, 219, 251, 584, 760, 795, 965
SsiI CCGC 3 cut(s) 619, 899, 931
SspI AATATT 1 cut(s) 1000
SspMI CTAG 3 cut(s) 366, 440, 1172
SstI GAGCTC 1 cut(s) 107
StyD4I CCNGG 7 cut(s) 225, 232, 475, 524, 1102, 1197, 1331
StyI CCWWGG 2 cut(s) 365, 1086
TaaI ACNGT 3 cut(s) 16, 793, 906
TaqI TCGA 2 cut(s) 121, 567
TaqII GACCGA 1 cut(s) 59
TasI AATT 8 cut(s) 20, 214, 219, 251, 584, 760, 795, 965
TatI WGTACW 1 cut(s) 556
TfiI GAWTC 4 cut(s) 123, 341, 421, 449
Tru1I TTAA 4 cut(s) 162, 263, 587, 759
Tru9I TTAA 4 cut(s) 162, 263, 587, 759
TscAI CASTG 4 cut(s) 21, 460, 850, 1099
TseFI GTSAC 4 cut(s) 40, 773, 1044, 1071
TseI GCWGC 5 cut(s) 493, 521, 752, 848, 985
Tsp45I GTSAC 4 cut(s) 40, 773, 1044, 1071
TspDTI ATGAA 3 cut(s) 48, 625, 1010
TspGWI ACGGA 3 cut(s) 776, 794, 995
TspRI CASTG 4 cut(s) 21, 460, 850, 1099
VneI GTGCAC 1 cut(s) 1269
XagI CCTNNNNNAGG 1 cut(s) 1196
XapI RAATTY 1 cut(s) 20
XceI RCATGY 2 cut(s) 52, 770
XcmI CCANNNNNNNNNTGG 1 cut(s) 668
XhoI CTCGAG 1 cut(s) 566
XmaJI CCTAGG 1 cut(s) 365
XmiI GTMKAC 1 cut(s) 1243
XspI CTAG 3 cut(s) 366, 440, 1172
Zsp2I ATGCAT 1 cut(s) 1239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.