Rh2DG385000

Sister chromatid cohesion protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0001637
Physical Location & Seq
Reverse (-)
55719695 .. 55731032
11338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG385000.1

Sequence Viewer

Length: 2976 bp
ATGACAAGCAAGGCTTCTAAAATTAAGGTCTCAGAGTTTGAAACACAAAACCACCAAACAAAAGGGTCTTCCGGAGTTCTGACAATGTCGTCCTCTAAGAAAGAGCTTGAGGAGCAGCTTAAGCAGGCTGGACATTCTCTCCTTAAGCCTCCTTCCAACACTGATGAGCTCCTCAAACTTCTTGATGAAGTTGAGGATTTGTTGTCAGATGTGGGGCAAGCACCATCTACATCCCTGCAAGATGCGCTTCTACCCACAATGACAGCATTAATCTCTACAGAACTGTTACGACACAGTCATATGGATGTGAAAGTTTCTGTTGCATCATGTATCACTGAGATTACTAGAATAACAGCACCGGAAGCCCCATACAACGATGAACAAATGAAGGAAATTTTTAAGCTGACTGTAGCAGCTTTTGAAAACTTGGCACATCTATCCAGTCGCTCTTACAAAAAGGCAGCTTCCATTCTAAGAGTTGTTGCGAAGGTCAGGTCAAGTGTGATGATGCTGGACCTTGACTGTTACACATTAATTGCTGAGATGTTTCAATATTTCCTAAATATAATCCAGTCCAACCATCCACATGCTGTATTTTCAGACATGCAAACTATTATGACAATGGTTTTAGATGAAATTCATGAAAGTGAAGAAATTCCCTTGGAACTTCTCAAAATTCTTTTATCAAGCGTTAGAAAGGAAAATCAGAATGTTTCACCTTTTTCTTGGAAATTGGGGGAGACAGTACTCGATAATTGTTCTGCTAAGGTTAAACCGTACCTCATGGAGGCAGTGAAGTCCATGGGTACTGCTATGGACGATTATGCTCATATAGTGGCTTCTATATGCCAAAATGGATCTGGTGCCCTCAAACTTGATCATGTCAATGATTCTGCAAAGAATCTGGTGACAGAGTTAGTTACTGCTGATGCTGCTTGTCCGTCAGCAATTGACAAATCTGTGCCTGCTTCTGCTCGTGATGAACATAAAGTTTTACGTGACTCTTCTAAAACATTACAGCGTTGTCATCTTACTAAACATTCCAAGGAGGTTGATTCACAAGATGGTGCTCAACCCGACAAAACATTCTCCGTGAAGGCTGTCAAATCAGTAACTGAGCCAGATTCGGGTACCAAAAAGAAAGCCAAAAGGCCCAGTTCTTCAATGGATCCAGAGGAAAAATCAGAAATTGAGCCATATTCAGCTCCAAAAAAGAGAGGCCGGAAGCCAAATTCTTTAATGAATCCAGAGGAAGGCTACGAGAATTATTGGGTGCATTCTGGAAAAAAATCTCCAAAATCAGCTGGCAACAGGAAGTCCCATGAAAAGGGATCTAATAGTTTACCTACTGAAGACCATCTTCGTTTGAAGGTCACTTTGTCATCCACTTTGCCATCGACACTTAAAGAAGTGACTCAGCCATCCACTTTGCCATCTACACATCAAAAAGTGACTGAGCCACCAAATGCTCAACCTAAAATAGAAGGGGAGATAGGATCTGCATCTTCGTTTCTACAAAATGGCCATCCTGAGGGAACCGAATCCAGAAGGGGTCGGCCAAAGAAGCAAGTAGCCATAGCACAACAAGAAGCTAATCCTACTTCCCTTTCAGCTGCGAAGGGAGATTTTTCGAGTGCTCAGGCTGAAGAGAAAAGTCCACGATCAATGGATACCTTGAATATGGAATCTAAGGAGACGAGTAGCTTAAAAGCAAAATCACGGGGACGCCCTAGAAAATTTCGTGCCAAAACAAATGATGAGACCATTATTGCTTCTGTACATGTTGGCACAGAGAAGGAATCTGCAGTTCCATGTGATCAGGAGGAAAAACAACAAGAGTCAGCTTTGACTCTTGGAACTGGGAATATCAATGATCAGTCAGCTGTGCAAAAGGTTGGGACTGGGAATGTGAGTGAAACAAAACCAAGGGGGCGGCCGAGAAAGCTTGCTGCAAAAATAAATCAGGAGACCTTTCTTGCTTCTGAACATGTAGTAGTCACAGAAAAAGAGTCACCAGTCCCATGTGATCCCGAGCAAAAACGGCAGCAAGAGCCAGCTCTACAGTATGAAACTGGGAGTATTAAGGATCAATCAGCTATAAAGGGTATCAAGAAACGTAGGCGGGATGATGGTCCTAGTAAAGATAGTGCTGAAGGATCTCTTAGCAAGAAGTTTTCCAAGTGTGAGGCAAAATTGGAGGGAGACAAAAATGTTGTTGAAGGAACCCCTAAGATTGTACGCAAGAGGAAGCGTTCCATTGGAAAGGAAGAGGCTAATCCAATGCCCGATCCTGATGACCGCTTAGTTGGCAAAGGAATAAAGGTTTGGTGGCCGCAGGACAAAACGTTTTATGATGGTGTTGTTCGTTCCTACGACGCTGTTAAAAAGAAGCACTTGGTGCTTTATAATGATGGGGAGAAAGAAAACCTGAACCTTCGAAAGCAACGGTGGCAACTGATTGGAGATGATTCAAAAGATCCATGTATACAACTGGGACAAAAGAGCGATACACCAAAGACTGATGCTTCTGACATACCACAAAAGAGGAAGCGGAAAGCAAAATCAGAGTCATCTAAGCAAGCAAATGCTGGTTTCTCCTTGAAAAGGATATCTAGAACTGGAGCCTCAGCTGGCTTATCCACTGTTGAGTGTATGAAGTCTGACAGTAAATCTGCAGACCGTTCTACAGTTAGTGAGCCTATTAAAGATGAAACACGGGATGACAAGTCCAAGGAAATTGACAGGTTGACAGATGATGAAGGTGAAATATATGCTGGGAAGTTGAAGGCAGATATGAAGACTGGTATTGACTCTACGCAGATCACACCTGAGGCTATGAACTTGTCTAAGGAAGAGAGTGCAAAAGTTGATATTGAACCCTCTGTTAGAGATGGTGCCAAAGAAATGAAAGAATTGAGCAATGGTGCAAAGGATGCAAGTTCCTCCCCTTCACCTGTGTTGGACAAGGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PEARLI-4

Protein Analysis

991

Amino Acids

108.9

Weight (kDa)

8.55

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 55 - 262 2.6e-47 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2406
AasI GACNNNNNNGTC 1 cut(s) 88
Acc65I GGTACC 1 cut(s) 1130
AccB1I GGYRCC 3 cut(s) 863, 1130, 2894
AccI GTMKAC 1 cut(s) 2485
AccIII TCCGGA 1 cut(s) 71
AciI CCGC 5 cut(s) 1933, 2122, 2299, 2333, 2551
AclI AACGTT 1 cut(s) 2345
AcoI YGGCCR 4 cut(s) 1522, 1556, 1934, 2330
AcsI RAATTY 6 cut(s) 393, 636, 654, 675, 1231, 1736
AcuI CTGAAG 3 cut(s) 1371, 1665, 2172
AcyI GRCGYC 1 cut(s) 1726
AdeI CACNNNGTG 1 cut(s) 2398
AfaI GTAC 6 cut(s) 747, 779, 808, 1132, 1779, 2238
AfiI CCNNNNNNNGG 6 cut(s) 787, 1127, 1253, 1327, 1531, 2604
AflII CTTAAG 2 cut(s) 119, 143
AflIII ACRYGT 2 cut(s) 1780, 1987
AjuI GAANNNNNNNTTGG 2 cut(s) 2308, 2340
Alw21I GWGCWC 3 cut(s) 171, 1072, 1639
Alw26I GTCTC 6 cut(s) 34, 734, 1688, 1754, 1961, 2196
AlwNI CAGNNNCTG 1 cut(s) 1115
Ama87I CYCGRG 1 cut(s) 2030
Aor13HI TCCGGA 1 cut(s) 71
AoxI GGCC 6 cut(s) 1151, 1219, 1522, 1556, 1934, 2330
ApeKI GCWGC 7 cut(s) 115, 413, 461, 932, 1613, 1949, 2044
ApoI RAATTY 6 cut(s) 393, 636, 654, 675, 1231, 1736
ArsI GACNNNNNNTTYG 4 cut(s) 479, 511, 2552, 2584
AseI ATTAAT 2 cut(s) 269, 533
Asp700I GAANNNNTTC 1 cut(s) 654
Asp718I GGTACC 1 cut(s) 1130
AspLEI GCGC 1 cut(s) 247
AspS9I GGNCC 3 cut(s) 514, 1152, 2132
AsuHPI GGTGA 5 cut(s) 708, 919, 2004, 2774, 2943
AsuII TTCGAA 1 cut(s) 2437
AvaI CYCGRG 1 cut(s) 2030
AvaII GGWCC 2 cut(s) 514, 2132
AxyI CCTNAGG 2 cut(s) 1530, 2829
BaeGI GKGCMC 1 cut(s) 868
BalI TGGCCA 1 cut(s) 1524
BamHI GGATCC 1 cut(s) 1168
BanI GGYRCC 3 cut(s) 863, 1130, 2894
BanII GRGCYC 1 cut(s) 171
BauI CACGAG 1 cut(s) 975
BbsI GAAGAC 3 cut(s) 60, 1359, 2804
Bbv12I GWGCWC 3 cut(s) 171, 1072, 1639
BbvCI CCTCAGC 1 cut(s) 2626
BbvI GCAGC 7 cut(s) 127, 425, 473, 919, 1600, 1936, 2056
BceAI ACGGC 1 cut(s) 2057
BciVI GTATCC 1 cut(s) 1663
BclI TGATCA 3 cut(s) 877, 1816, 1873
BcoDI GTCTC 6 cut(s) 34, 734, 1688, 1754, 1961, 2196
BfaI CTAG 4 cut(s) 345, 1731, 2136, 2613
BfmI CTRYAG 6 cut(s) 276, 408, 1803, 2060, 2673, 2685
BfrI CTTAAG 2 cut(s) 119, 143
BfuI GTATCC 1 cut(s) 1663
BisI GCNGC 9 cut(s) 116, 414, 462, 933, 1614, 1934, 1950, 2045, 2333
BlsI GCNGC 9 cut(s) 117, 415, 463, 934, 1615, 1935, 1951, 2046, 2334
BmcAI AGTACT 1 cut(s) 747
Bme18I GGWCC 2 cut(s) 514, 2132
BmeT110I CYCGRG 1 cut(s) 2030
BmgT120I GGNCC 3 cut(s) 514, 1152, 2132
BmiI GGNNCC 7 cut(s) 865, 1132, 1170, 1537, 2224, 2623, 2896
BmrI ACTGGG 5 cut(s) 1149, 1869, 1911, 2082, 2501
BmsI GCATC 7 cut(s) 232, 332, 498, 919, 1511, 2512, 2923
BmuI ACTGGG 5 cut(s) 1149, 1869, 1911, 2082, 2501
BpiI GAAGAC 3 cut(s) 60, 1359, 2804
BpmI CTGGAG 1 cut(s) 2640
Bpu10I CCTNAGC 3 cut(s) 765, 1638, 2626
Bpu14I TTCGAA 1 cut(s) 2437
BpuEI CTTGAG 1 cut(s) 128
BsaAI YACGTR 1 cut(s) 998
BsaBI GATNNNNATC 1 cut(s) 1501
BsaHI GRCGYC 1 cut(s) 1726
BsaI GGTCTC 3 cut(s) 34, 1754, 1961
BsaJI CCNNGG 5 cut(s) 660, 801, 1044, 1925, 2730
BsaWI WCCGGW 2 cut(s) 71, 358
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 6 cut(s) 787, 1127, 1253, 1327, 1531, 2604
Bse21I CCTNAGG 2 cut(s) 1530, 2829
Bse3DI GCAATG 1 cut(s) 2926
Bse8I GATNNNNATC 1 cut(s) 1501
BseAI TCCGGA 1 cut(s) 71
BseDI CCNNGG 5 cut(s) 660, 801, 1044, 1925, 2730
BseGI GGATG 9 cut(s) 230, 310, 580, 1382, 1421, 1525, 2131, 2725, 2938
BseJI GATNNNNATC 1 cut(s) 1501
BseLI CCNNNNNNNGG 6 cut(s) 787, 1127, 1253, 1327, 1531, 2604
BseMI GCAATG 1 cut(s) 2926
BseRI GAGGAG 2 cut(s) 125, 161
BseSI GKGCMC 1 cut(s) 868
BseX3I CGGCCG 1 cut(s) 1934
BseXI GCAGC 7 cut(s) 127, 425, 473, 919, 1600, 1936, 2056
BseYI CCCAGC 1 cut(s) 2774
Bsh1285I CGRYCG 1 cut(s) 1937
BshFI GGCC 6 cut(s) 1153, 1221, 1524, 1558, 1936, 2332
BshNI GGYRCC 3 cut(s) 863, 1130, 2894
BsiEI CGRYCG 1 cut(s) 1937
BsiHKAI GWGCWC 3 cut(s) 171, 1072, 1639
BsiHKCI CYCGRG 1 cut(s) 2030
BsiSI CCGG 3 cut(s) 72, 359, 1222
BslFI GGGAC 5 cut(s) 1303, 1737, 1912, 2003, 2508
BslI CCNNNNNNNGG 6 cut(s) 787, 1127, 1253, 1327, 1531, 2604
BsmAI GTCTC 6 cut(s) 34, 734, 1688, 1754, 1961, 2196
BsmBI CGTCTC 1 cut(s) 1688
BsmFI GGGAC 5 cut(s) 1303, 1737, 1912, 2003, 2508
BsmI GAATGC 1 cut(s) 1276
BsnI GGCC 6 cut(s) 1153, 1221, 1524, 1558, 1936, 2332
Bso31I GGTCTC 3 cut(s) 34, 1754, 1961
BsoBI CYCGRG 1 cut(s) 2030
Bsp119I TTCGAA 1 cut(s) 2437
Bsp1286I GDGCHC 4 cut(s) 171, 868, 1072, 1639
Bsp13I TCCGGA 1 cut(s) 71
Bsp1407I TGTACA 1 cut(s) 1777
Bsp19I CCATGG 1 cut(s) 801
BspACI CCGC 5 cut(s) 1933, 2122, 2299, 2333, 2551
BspANI GGCC 6 cut(s) 1153, 1221, 1524, 1558, 1936, 2332
BspEI TCCGGA 1 cut(s) 71
BspHI TCATGA 1 cut(s) 640
BspLI GGNNCC 7 cut(s) 865, 1132, 1170, 1537, 2224, 2623, 2896
BspMAI CTGCAG 2 cut(s) 1807, 2677
BspT104I TTCGAA 1 cut(s) 2437
BspT107I GGYRCC 3 cut(s) 863, 1130, 2894
BspTI CTTAAG 2 cut(s) 119, 143
BspTNI GGTCTC 3 cut(s) 34, 1754, 1961
BsrDI GCAATG 1 cut(s) 2926
BsrGI TGTACA 1 cut(s) 1777
BssECI CCNNGG 5 cut(s) 660, 801, 1044, 1925, 2730
BssNAI GTATAC 1 cut(s) 2486
BssNI GRCGYC 1 cut(s) 1726
BssSI CACGAG 1 cut(s) 975
BssT1I CCWWGG 5 cut(s) 660, 801, 1044, 1925, 2730
Bst1107I GTATAC 1 cut(s) 2486
Bst2BI CACGAG 1 cut(s) 975
Bst6I CTCTTC 4 cut(s) 1009, 1641, 2262, 2847
BstACI GRCGYC 1 cut(s) 1726
BstAFI CTTAAG 2 cut(s) 119, 143
BstAPI GCANNNNNTGC 2 cut(s) 2398, 2933
BstAUI TGTACA 1 cut(s) 1777
BstBAI YACGTR 1 cut(s) 998
BstBI TTCGAA 1 cut(s) 2437
BstC8I GCNNGC 8 cut(s) 126, 219, 966, 1306, 1947, 2055, 2580, 2632
BstDSI CCRYGG 1 cut(s) 801
BstENI CCTNNNNNAGG 2 cut(s) 785, 2602
BstF5I GGATG 9 cut(s) 230, 310, 580, 1382, 1421, 1525, 2131, 2725, 2938
BstHHI GCGC 1 cut(s) 247
BstMAI GTCTC 6 cut(s) 34, 734, 1688, 1754, 1961, 2196
BstMCI CGRYCG 1 cut(s) 1937
BstNSI RCATGY 4 cut(s) 590, 607, 1784, 1991
BstSFI CTRYAG 6 cut(s) 276, 408, 1803, 2060, 2673, 2685
BstSLI GKGCMC 1 cut(s) 868
BstV1I GCAGC 7 cut(s) 127, 425, 473, 919, 1600, 1936, 2056
BstV2I GAAGAC 3 cut(s) 60, 1359, 2804
BstX2I RGATCY 6 cut(s) 857, 1168, 1331, 1496, 2156, 2476
BstYI RGATCY 6 cut(s) 857, 1168, 1331, 1496, 2156, 2476
BstZ17I GTATAC 1 cut(s) 2486
BstZI CGGCCG 1 cut(s) 1934
Bsu36I CCTNAGG 2 cut(s) 1530, 2829
BsuI GTATCC 1 cut(s) 1663
BsuRI GGCC 6 cut(s) 1153, 1221, 1524, 1558, 1936, 2332
BtgI CCRYGG 1 cut(s) 801
BtsCI GGATG 9 cut(s) 230, 310, 580, 1382, 1421, 1525, 2131, 2725, 2938
BtsI GCAGTG 1 cut(s) 798
BtsIMutI CAGTG 4 cut(s) 159, 333, 798, 2640
Cac8I GCNNGC 8 cut(s) 126, 219, 966, 1306, 1947, 2055, 2580, 2632
CaiI CAGNNNCTG 1 cut(s) 1115
CciI TCATGA 1 cut(s) 640
CfoI GCGC 1 cut(s) 247
Cfr13I GGNCC 3 cut(s) 514, 1152, 2132
CseI GACGC 2 cut(s) 1734, 2384
Csp6I GTAC 6 cut(s) 746, 778, 807, 1131, 1778, 2237
CviQI GTAC 6 cut(s) 746, 778, 807, 1131, 1778, 2237
DraIII CACNNNGTG 1 cut(s) 2398
DrdI GACNNNNNNGTC 1 cut(s) 88
DseDI GACNNNNNNGTC 1 cut(s) 88
EaeI YGGCCR 4 cut(s) 1522, 1556, 1934, 2330
EagI CGGCCG 1 cut(s) 1934
Eam1104I CTCTTC 4 cut(s) 1009, 1641, 2262, 2847
EarI CTCTTC 4 cut(s) 1009, 1641, 2262, 2847
Ecl136II GAGCTC 1 cut(s) 169
EclXI CGGCCG 1 cut(s) 1934
Eco130I CCWWGG 5 cut(s) 660, 801, 1044, 1925, 2730
Eco24I GRGCYC 1 cut(s) 171
Eco31I GGTCTC 3 cut(s) 34, 1754, 1961
Eco32I GATATC 1 cut(s) 2610
Eco47I GGWCC 2 cut(s) 514, 2132
Eco52I CGGCCG 1 cut(s) 1934
Eco53kI GAGCTC 1 cut(s) 169
Eco57I CTGAAG 3 cut(s) 1371, 1665, 2172
Eco81I CCTNAGG 2 cut(s) 1530, 2829
Eco88I CYCGRG 1 cut(s) 2030
EcoICRI GAGCTC 1 cut(s) 169
EcoNI CCTNNNNNAGG 2 cut(s) 785, 2602
EcoRV GATATC 1 cut(s) 2610
EcoT14I CCWWGG 5 cut(s) 660, 801, 1044, 1925, 2730
EcoT38I GRGCYC 1 cut(s) 171
ErhI CCWWGG 5 cut(s) 660, 801, 1044, 1925, 2730
Esp3I CGTCTC 1 cut(s) 1688
FalI AAGNNNNNCTT 9 cut(s) 30, 231, 263, 1344, 1376, 2145, 2177, 2378, 2410
FaqI GGGAC 5 cut(s) 1303, 1737, 1912, 2003, 2508
FauI CCCGC 1 cut(s) 2115
FauNDI CATATG 1 cut(s) 300
FbaI TGATCA 3 cut(s) 877, 1816, 1873
FblI GTMKAC 1 cut(s) 2485
Fnu4HI GCNGC 9 cut(s) 116, 414, 462, 933, 1614, 1934, 1950, 2045, 2333
FokI GGATG 9 cut(s) 217, 317, 567, 1369, 1408, 1512, 2138, 2732, 2945
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 9 cut(s) 116, 414, 462, 933, 1614, 1934, 1950, 2045, 2333
FspBI CTAG 4 cut(s) 345, 1731, 2136, 2613
GlaI GCGC 1 cut(s) 246
GluI GCNGC 9 cut(s) 116, 414, 462, 933, 1614, 1934, 1950, 2045, 2333
GsaI CCCAGC 1 cut(s) 2778
GsuI CTGGAG 1 cut(s) 2640
HaeIII GGCC 6 cut(s) 1153, 1221, 1524, 1558, 1936, 2332
HapII CCGG 3 cut(s) 72, 359, 1222
HgaI GACGC 2 cut(s) 1734, 2384
HhaI GCGC 1 cut(s) 247
Hin1I GRCGYC 1 cut(s) 1726
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HincII GTYRAC 1 cut(s) 2748
HindII GTYRAC 1 cut(s) 2748
HindIII AAGCTT 1 cut(s) 1943
HpaII CCGG 3 cut(s) 72, 359, 1222
HphI GGTGA 5 cut(s) 708, 919, 2004, 2774, 2943
Hpy166II GTNNAC 4 cut(s) 1343, 1658, 2486, 2748
Hpy8I GTNNAC 4 cut(s) 1343, 1658, 2486, 2748
Hpy99I CGWCG 1 cut(s) 2378
HpyCH4IV ACGT 3 cut(s) 997, 2116, 2345
HpySE526I ACGT 3 cut(s) 997, 2116, 2345
Hsp92I GRCGYC 1 cut(s) 1726
HspAI GCGC 1 cut(s) 245
Kpn2I TCCGGA 1 cut(s) 71
KpnI GGTACC 1 cut(s) 1134
Ksp22I TGATCA 3 cut(s) 877, 1816, 1873
LmnI GCTCC 4 cut(s) 112, 174, 1210, 2621
Lsp1109I GCAGC 7 cut(s) 127, 425, 473, 919, 1600, 1936, 2056
LweI GCATC 7 cut(s) 232, 332, 498, 919, 1511, 2512, 2923
MaeI CTAG 4 cut(s) 345, 1731, 2136, 2613
MaeII ACGT 3 cut(s) 997, 2116, 2345
MfeI CAATTG 1 cut(s) 948
MflI RGATCY 6 cut(s) 857, 1168, 1331, 1496, 2156, 2476
MhlI GDGCHC 4 cut(s) 171, 868, 1072, 1639
MlsI TGGCCA 1 cut(s) 1524
MluNI TGGCCA 1 cut(s) 1524
MlyI GAGTC 7 cut(s) 995, 1408, 1843, 1847, 2018, 2576, 2804
MmeI TCCRAC 3 cut(s) 180, 600, 2940
Mox20I TGGCCA 1 cut(s) 1524
MroI TCCGGA 1 cut(s) 71
MroXI GAANNNNTTC 1 cut(s) 654
MscI TGGCCA 1 cut(s) 1524
MslI CAYNNNNRTG 4 cut(s) 303, 585, 645, 885
Msp20I TGGCCA 1 cut(s) 1524
MspA1I CMGCKG 4 cut(s) 1304, 1613, 1883, 2630
MspCI CTTAAG 2 cut(s) 119, 143
MspI CCGG 3 cut(s) 72, 359, 1222
MunI CAATTG 1 cut(s) 948
Mva1269I GAATGC 1 cut(s) 1276
NcoI CCATGG 1 cut(s) 801
NdeI CATATG 1 cut(s) 300
NlaIV GGNNCC 7 cut(s) 865, 1132, 1170, 1537, 2224, 2623, 2896
NmeAIII GCCGAG 1 cut(s) 1962
NmuCI GTSAC 7 cut(s) 907, 998, 1372, 1411, 1450, 1996, 2010
NspI RCATGY 4 cut(s) 590, 607, 1784, 1991
NspV TTCGAA 1 cut(s) 2437
PagI TCATGA 1 cut(s) 640
PciI ACATGT 2 cut(s) 1780, 1987
PctI GAATGC 1 cut(s) 1276
PdmI GAANNNNTTC 1 cut(s) 654
PfeI GAWTC 9 cut(s) 890, 901, 1055, 1124, 1243, 1541, 1685, 1799, 2468
PflFI GACNNNGTC 2 cut(s) 85, 294
PkrI GCNGC 9 cut(s) 117, 415, 463, 934, 1615, 1935, 1951, 2046, 2334
PleI GAGTC 7 cut(s) 995, 1408, 1843, 1846, 2017, 2575, 2804
PpsI GAGTC 7 cut(s) 995, 1408, 1843, 1846, 2017, 2575, 2804
Ppu21I YACGTR 1 cut(s) 998
PscI ACATGT 2 cut(s) 1780, 1987
PshBI ATTAAT 2 cut(s) 269, 533
PsiI TTATAA 1 cut(s) 2406
Psp124BI GAGCTC 1 cut(s) 171
Psp1406I AACGTT 1 cut(s) 2345
PspFI CCCAGC 1 cut(s) 2774
PspN4I GGNNCC 7 cut(s) 865, 1132, 1170, 1537, 2224, 2623, 2896
PspPI GGNCC 3 cut(s) 514, 1152, 2132
PstI CTGCAG 2 cut(s) 1807, 2677
PstNI CAGNNNCTG 1 cut(s) 1115
PsuI RGATCY 6 cut(s) 857, 1168, 1331, 1496, 2156, 2476
PsyI GACNNNGTC 2 cut(s) 85, 294
PvuII CAGCTG 4 cut(s) 1304, 1613, 1883, 2630
RsaI GTAC 6 cut(s) 747, 779, 808, 1132, 1779, 2238
RsaNI GTAC 6 cut(s) 746, 778, 807, 1131, 1778, 2237
RseI CAYNNNNRTG 4 cut(s) 303, 585, 645, 885
SacI GAGCTC 1 cut(s) 171
SatI GCNGC 9 cut(s) 116, 414, 462, 933, 1614, 1934, 1950, 2045, 2333
Sau96I GGNCC 3 cut(s) 514, 1152, 2132
ScaI AGTACT 1 cut(s) 747
SchI GAGTC 7 cut(s) 995, 1408, 1843, 1847, 2018, 2576, 2804
SduI GDGCHC 4 cut(s) 171, 868, 1072, 1639
SfaNI GCATC 7 cut(s) 232, 332, 498, 919, 1511, 2512, 2923
SfcI CTRYAG 6 cut(s) 276, 408, 1803, 2060, 2673, 2685
SfuI TTCGAA 1 cut(s) 2437
SinI GGWCC 2 cut(s) 514, 2132
SmiMI CAYNNNNRTG 4 cut(s) 303, 585, 645, 885
SmlI CTYRAG 3 cut(s) 107, 119, 143
SmoI CTYRAG 3 cut(s) 107, 119, 143
SsiI CCGC 5 cut(s) 1933, 2122, 2299, 2333, 2551
SspI AATATT 1 cut(s) 554
SspMI CTAG 4 cut(s) 345, 1731, 2136, 2613
SstI GAGCTC 1 cut(s) 171
StyI CCWWGG 5 cut(s) 660, 801, 1044, 1925, 2730
TaiI ACGT 3 cut(s) 1000, 2119, 2348
TaqI TCGA 4 cut(s) 750, 1397, 1631, 2437
TatI WGTACW 2 cut(s) 745, 1777
TauI GCSGC 2 cut(s) 1936, 2335
TfiI GAWTC 9 cut(s) 890, 901, 1055, 1124, 1243, 1541, 1685, 1799, 2468
TscAI CASTG 4 cut(s) 166, 340, 798, 2647
TseFI GTSAC 7 cut(s) 907, 998, 1372, 1411, 1450, 1996, 2010
TseI GCWGC 7 cut(s) 115, 413, 461, 932, 1613, 1949, 2044
Tsp45I GTSAC 7 cut(s) 907, 998, 1372, 1411, 1450, 1996, 2010
TspGWI ACGGA 2 cut(s) 930, 1081
TspRI CASTG 4 cut(s) 166, 340, 798, 2647
Tth111I GACNNNGTC 2 cut(s) 85, 294
Vha464I CTTAAG 2 cut(s) 119, 143
VpaK11BI GGWCC 2 cut(s) 514, 2132
VspI ATTAAT 2 cut(s) 269, 533
XagI CCTNNNNNAGG 2 cut(s) 785, 2602
XapI RAATTY 6 cut(s) 393, 636, 654, 675, 1231, 1736
XbaI TCTAGA 1 cut(s) 2612
XceI RCATGY 4 cut(s) 590, 607, 1784, 1991
XcmI CCANNNNNNNNNTGG 2 cut(s) 857, 1162
XmiI GTMKAC 1 cut(s) 2485
XmnI GAANNNNTTC 1 cut(s) 654
XspI CTAG 4 cut(s) 345, 1731, 2136, 2613
ZrmI AGTACT 1 cut(s) 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.