RchiOBHm_Chr2g0133121

Sister chromatid cohesion protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001637
Physical Location & Seq
Reverse (-)
49800221 .. 49811733
11513 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50432

Sequence Viewer

Length: 2883 bp
ATGTCGTCCTCTAAGAAAGAGCTTGAGGAGCAGCTTAAGCAGGCTGGACATTCTCTCCTTAAGCCTCCTTCCAACACTGATGAGCTCCTCAAACTTCTTGATGAAGTTGAGGATTTGTTGTCAGATGTGGGGCAAGCACCATCTACATCCCTGCAAGATGCGCTTCTACCCACAATGACAGCATTAATCTCTACAGAACTGTTACGACACAGTCATATGGATGTGAAAGTTTCTGTTGCATCATGTATCACTGAGATTACTAGAATAACAGCACCGGAAGCCCCATACAACGATGAACAAATGAAGGAAATTTTTAAGCTGACTGTAGCAGCTTTTGAAAACTTGGCACATCTATCCAGTCGCTCTTACAAAAAGGCAGCTTCCATTCTAAGAGTTGTTGCGAAGGTCAGGTCAAGTGTGATGATGCTGGACCTTGACTGTTACACATTAATTGCTGAGATGTTTCAATATTTCCTAAATATAATCCAGTCCAACCATCCACATGCTGTATTTTCAGACATGCAAACTATTATGACAATGGTTTTAGATGAAATTCATGAAAGTGAAGAAATTCCCTTGGAACTTCTCAAAATTCTTTTATCAAGCGTTAGAAAGGAAAATCAGAATGTTTCGCCTTTTTCTTGGAAATTGGGGGAGACAGTACTCGATAATTGTTCTGCTAAGGTTAAACCGTACCTCATGGAGGCAGTGAAGTCCATGGGTACTGCTATGGACGATTATGCTCATATAGTGGCTTCTATATGCCAAAATGGATCTGGTGCCCTCAAACTTGATCATGTCAATGATTCTGCAAAGAATCTGGTGACAGAGGTAGTTACTGCTGATGCTGCTTGTCCTTCAGCAATTGACAAATCTGTGCCTGCTTCCGCTCGTGATGAACATATAGTTTTACGTGACTCTTCTAAAACATTACAGCGTTGTCATCTTACTAAACATTCCAAGGAGGTTGATTCACAAGATGGTGCTCAACCCAACAAAACATTCTCCGTGAAGGCTGTCAAATCAGTAACTGAGCCAGATTCAGGTACCAAAAAGAAAGCCAAAAGGCCCAGTTCTTCAATGGATCCAGAGGAAAAATCAGAAATTGAGCCATATTCAGCTCCAAAAAAGAGAGGCCGGAAGCCAAATTCTTTAATGAATCCAGAGGAAGGCTACGAGAATTATTGGATGCATTCTGGAAAAAAATCTCCAAAATCAGCTGGCAACAGGAAGTCCCATGAAAAGGGATCTAATAGTTTACCTACTGAAGACCATCTTCGTTTGAAGGTCACTTTGTCATCCACTTTGCCATCGACACTTAAAGAAGTGACTCAGCCATCCACTTTGCCATCTACACATCAAAAAGTGACTGAGCCACCAAATGCTCAACCTAAAATAGAAGGGGAGATAGGATCTGCATCTTCGTTTCTACAAAATGGCCATCCTGAGGGAACCGAATCCAGAAGGGGTCGGCCAAAGAAGCAAGTAGCCATAGCACAACAAGAAGCTAATCCTACTTCCCTTTCAGCTGCGAAGGGAGATTTTTTGAGTGCTCAGGCTGAAGAGAAAAGTCCACGATCAATGGATACCTTGAATATGGAATCTAAGGAGACAAGTAGCTTAAAAGCAAAATCACGGGGACGCCCTAGAAAATTTCGTGCCAAAACAAATGATGAGACCATTATTGCTTCTGTACATGTTGGCACAGAGAAGGAATCTGCAGTTCCATGTGATCAGGAGGAAAAACAACAAGAGTCAGCTTTGACTCTTGGAACTGGGAATATCAATGATCAGTCGGCTGTGCAAAAGGTTGGGACTGGGAATGTGAGTGAAACAAAACCAAGGGGGCGGCCGAGAAAGCTTGCTGCAAAAATAAATCAGGAGACCTTTCTTGCTTCTGCACATGTAGTAGTCACAGAAAAAGAGTCACCAGTCCCATGTGATCCCGAGCAAAAACGGCAGCAAGAGCCAGCTCTACAGTATGATACTGGGAGTATTAAGGATCAATCAGCTATAAAGGGTATCAAGAAACGTAGGCGGGATGATGCTCCTAGTAAAGATAGTGCTGAAGGATCTCTTAGCAAGAAGTTTTCCAAGTGTGAGGCAAAATTGGAGGGAGATAAAAATGTTGTTGAAGGAACCCCTAAGATTGTACGCAAGAGGAAGCGTTCCATTGGAAAGGAAGAGGCTAATCCAATGCCCGATCCTGATGACCGCTTAGTTGGCAAAGGAATAAAGGTTTGGTGGCCGCAGGACAAAACGTATTATGATGGTGTTGTTCGTTCCTACGACACTGTTAAAAAGAAGCACTTGGTGCTTTATAATGATGGGGAGAAAGAAAACCTGAACCTTCGAAAGCAACGGTGGCAACTGATTGGAGATGATTCAAAAGATCCATGTATACAACTGGGACAAAAGAGTGATACACCAAAGACTGATGCTTCTGACATACCACAAAAGAGGAAGCGGAAAGCAAAATCAGAGTCATCTAAGCAAGCAAATGCTGGTTTCTCCTTGAAAAGAACTGGAGCCTCAGCTGGCTTATCCACTGTTGAGTGTATGAAGTCTGACAGTAAATCTGCAGACCGTTCTACAGTTAGTGAGCCTATTAAAGATGAAACACGGGATGACAAGTCCAAGGAAATTGACAGGTTGACGGATGATGAAGGTGAAATATATGCTGGCAAGTTGAAGGCAGATATGAAGACTGGTATTGACTCTACGCAGATCACACCTGAGGCTATGAACTTGTCTAAGGAAGAGAGTGCAAAAGTTGATATTGAACCCTCTGTTAGAGATGGTGCCAAAGAAATGAAAGAATTGAGCAATGGTGCAAAGGATGCAAGTTCCTCCCCTTCACCTGTGTTGGACAAGGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PEARLI-4

Protein Analysis

960

Amino Acids

105.55

Weight (kDa)

8.4

Isoelectric Point (pI)

49.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 234 2.1e-47 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2322
Acc65I GGTACC 1 cut(s) 1046
AccB1I GGYRCC 3 cut(s) 779, 1046, 2801
AccBSI CCGCTC 1 cut(s) 890
AccI GTMKAC 1 cut(s) 2401
AciI CCGC 6 cut(s) 888, 1849, 2038, 2215, 2249, 2467
AcoI YGGCCR 4 cut(s) 1438, 1472, 1850, 2246
AcsI RAATTY 6 cut(s) 309, 552, 570, 591, 1147, 1652
AcuI CTGAAG 4 cut(s) 843, 1287, 1581, 2088
AcyI GRCGYC 1 cut(s) 1642
AdeI CACNNNGTG 1 cut(s) 2314
AfaI GTAC 6 cut(s) 663, 695, 724, 1048, 1695, 2154
AfiI CCNNNNNNNGG 5 cut(s) 703, 1043, 1169, 1243, 1447
AflII CTTAAG 2 cut(s) 35, 59
AflIII ACRYGT 2 cut(s) 1696, 1903
AjuI GAANNNNNNNTTGG 4 cut(s) 986, 1018, 2224, 2256
Alw21I GWGCWC 3 cut(s) 87, 988, 1555
Alw26I GTCTC 4 cut(s) 650, 1604, 1670, 1877
AlwNI CAGNNNCTG 1 cut(s) 1031
Ama87I CYCGRG 1 cut(s) 1946
AoxI GGCC 6 cut(s) 1067, 1135, 1438, 1472, 1850, 2246
ApeKI GCWGC 7 cut(s) 31, 329, 377, 848, 1529, 1865, 1960
ApoI RAATTY 6 cut(s) 309, 552, 570, 591, 1147, 1652
ArsI GACNNNNNNTTYG 4 cut(s) 395, 427, 2468, 2500
AseI ATTAAT 2 cut(s) 185, 449
Asp700I GAANNNNTTC 1 cut(s) 570
Asp718I GGTACC 1 cut(s) 1046
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 2 cut(s) 430, 1068
AsuHPI GGTGA 4 cut(s) 835, 1920, 2681, 2850
AsuII TTCGAA 1 cut(s) 2353
AvaI CYCGRG 1 cut(s) 1946
AvaII GGWCC 1 cut(s) 430
AxyI CCTNAGG 2 cut(s) 1446, 2736
BaeGI GKGCMC 1 cut(s) 784
BalI TGGCCA 1 cut(s) 1440
BamHI GGATCC 1 cut(s) 1084
BanI GGYRCC 3 cut(s) 779, 1046, 2801
BanII GRGCYC 1 cut(s) 87
BauI CACGAG 1 cut(s) 891
BbsI GAAGAC 2 cut(s) 1275, 2711
Bbv12I GWGCWC 3 cut(s) 87, 988, 1555
BbvCI CCTCAGC 1 cut(s) 2533
BbvI GCAGC 7 cut(s) 43, 341, 389, 835, 1516, 1852, 1972
BceAI ACGGC 1 cut(s) 1973
BciVI GTATCC 1 cut(s) 1579
BclI TGATCA 3 cut(s) 793, 1732, 1789
BcoDI GTCTC 4 cut(s) 650, 1604, 1670, 1877
BfaI CTAG 3 cut(s) 261, 1647, 2052
BfmI CTRYAG 6 cut(s) 192, 324, 1719, 1976, 2580, 2592
BfrI CTTAAG 2 cut(s) 35, 59
BfuI GTATCC 1 cut(s) 1579
BisI GCNGC 9 cut(s) 32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
BlsI GCNGC 9 cut(s) 33, 331, 379, 850, 1531, 1851, 1867, 1962, 2250
BmcAI AGTACT 1 cut(s) 663
Bme18I GGWCC 1 cut(s) 430
BmeT110I CYCGRG 1 cut(s) 1946
BmgT120I GGNCC 2 cut(s) 430, 1068
BmiI GGNNCC 7 cut(s) 781, 1048, 1086, 1453, 2140, 2530, 2803
BmrI ACTGGG 5 cut(s) 1065, 1785, 1827, 1998, 2417
BmsI GCATC 9 cut(s) 148, 248, 414, 835, 1179, 1427, 2035, 2428, 2830
BmuI ACTGGG 5 cut(s) 1065, 1785, 1827, 1998, 2417
BpiI GAAGAC 2 cut(s) 1275, 2711
BpmI CTGGAG 1 cut(s) 2547
Bpu10I CCTNAGC 3 cut(s) 681, 1554, 2533
Bpu14I TTCGAA 1 cut(s) 2353
BpuEI CTTGAG 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 914
BsaBI GATNNNNATC 1 cut(s) 1417
BsaHI GRCGYC 1 cut(s) 1642
BsaI GGTCTC 2 cut(s) 1670, 1877
BsaJI CCNNGG 5 cut(s) 576, 717, 960, 1841, 2637
BsaWI WCCGGW 1 cut(s) 274
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bsc4I CCNNNNNNNGG 5 cut(s) 703, 1043, 1169, 1243, 1447
Bse21I CCTNAGG 2 cut(s) 1446, 2736
Bse3DI GCAATG 1 cut(s) 2833
Bse8I GATNNNNATC 1 cut(s) 1417
BseDI CCNNGG 5 cut(s) 576, 717, 960, 1841, 2637
BseJI GATNNNNATC 1 cut(s) 1417
BseLI CCNNNNNNNGG 5 cut(s) 703, 1043, 1169, 1243, 1447
BseMI GCAATG 1 cut(s) 2833
BseMII CTCAG 9 cut(s) 243, 447, 1023, 1346, 1362, 1437, 1568, 2547, 2727
BseRI GAGGAG 2 cut(s) 41, 77
BseSI GKGCMC 1 cut(s) 784
BseX3I CGGCCG 1 cut(s) 1850
BseXI GCAGC 7 cut(s) 43, 341, 389, 835, 1516, 1852, 1972
BsgI GTGCAG 1 cut(s) 1884
Bsh1285I CGRYCG 1 cut(s) 1853
BshFI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
BshNI GGYRCC 3 cut(s) 779, 1046, 2801
BsiEI CGRYCG 1 cut(s) 1853
BsiHKAI GWGCWC 3 cut(s) 87, 988, 1555
BsiHKCI CYCGRG 1 cut(s) 1946
BsiSI CCGG 2 cut(s) 275, 1138
BslFI GGGAC 5 cut(s) 1219, 1653, 1828, 1919, 2424
BslI CCNNNNNNNGG 5 cut(s) 703, 1043, 1169, 1243, 1447
BsmAI GTCTC 4 cut(s) 650, 1604, 1670, 1877
BsmFI GGGAC 5 cut(s) 1219, 1653, 1828, 1919, 2424
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
Bso31I GGTCTC 2 cut(s) 1670, 1877
BsoBI CYCGRG 1 cut(s) 1946
Bsp119I TTCGAA 1 cut(s) 2353
Bsp1286I GDGCHC 4 cut(s) 87, 784, 988, 1555
Bsp1407I TGTACA 1 cut(s) 1693
Bsp19I CCATGG 1 cut(s) 717
BspACI CCGC 6 cut(s) 888, 1849, 2038, 2215, 2249, 2467
BspANI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
BspCNI CTCAG 9 cut(s) 244, 448, 1024, 1345, 1363, 1438, 1567, 2546, 2728
BspHI TCATGA 1 cut(s) 556
BspLI GGNNCC 7 cut(s) 781, 1048, 1086, 1453, 2140, 2530, 2803
BspMAI CTGCAG 2 cut(s) 1723, 2584
BspT104I TTCGAA 1 cut(s) 2353
BspT107I GGYRCC 3 cut(s) 779, 1046, 2801
BspTI CTTAAG 2 cut(s) 35, 59
BspTNI GGTCTC 2 cut(s) 1670, 1877
BsrBI CCGCTC 1 cut(s) 890
BsrDI GCAATG 1 cut(s) 2833
BsrGI TGTACA 1 cut(s) 1693
BssECI CCNNGG 5 cut(s) 576, 717, 960, 1841, 2637
BssNAI GTATAC 1 cut(s) 2402
BssNI GRCGYC 1 cut(s) 1642
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 5 cut(s) 576, 717, 960, 1841, 2637
Bst1107I GTATAC 1 cut(s) 2402
Bst2BI CACGAG 1 cut(s) 891
Bst6I CTCTTC 4 cut(s) 925, 1557, 2178, 2754
BstACI GRCGYC 1 cut(s) 1642
BstAFI CTTAAG 2 cut(s) 35, 59
BstAPI GCANNNNNTGC 2 cut(s) 2314, 2840
BstAUI TGTACA 1 cut(s) 1693
BstBAI YACGTR 1 cut(s) 914
BstBI TTCGAA 1 cut(s) 2353
BstC8I GCNNGC 9 cut(s) 42, 135, 882, 1222, 1863, 1971, 2496, 2539, 2683
BstDSI CCRYGG 1 cut(s) 717
BstENI CCTNNNNNAGG 1 cut(s) 701
BstHHI GCGC 1 cut(s) 163
BstMAI GTCTC 4 cut(s) 650, 1604, 1670, 1877
BstMCI CGRYCG 1 cut(s) 1853
BstNSI RCATGY 4 cut(s) 506, 523, 1700, 1907
BstSFI CTRYAG 6 cut(s) 192, 324, 1719, 1976, 2580, 2592
BstSLI GKGCMC 1 cut(s) 784
BstV1I GCAGC 7 cut(s) 43, 341, 389, 835, 1516, 1852, 1972
BstV2I GAAGAC 2 cut(s) 1275, 2711
BstX2I RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
BstYI RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
BstZ17I GTATAC 1 cut(s) 2402
BstZI CGGCCG 1 cut(s) 1850
Bsu36I CCTNAGG 2 cut(s) 1446, 2736
BsuI GTATCC 1 cut(s) 1579
BsuRI GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
BtgI CCRYGG 1 cut(s) 717
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 5 cut(s) 75, 249, 714, 2292, 2547
Cac8I GCNNGC 9 cut(s) 42, 135, 882, 1222, 1863, 1971, 2496, 2539, 2683
CaiI CAGNNNCTG 1 cut(s) 1031
CciI TCATGA 1 cut(s) 556
CfoI GCGC 1 cut(s) 163
Cfr13I GGNCC 2 cut(s) 430, 1068
CseI GACGC 1 cut(s) 1650
Csp6I GTAC 6 cut(s) 662, 694, 723, 1047, 1694, 2153
CviQI GTAC 6 cut(s) 662, 694, 723, 1047, 1694, 2153
DraIII CACNNNGTG 1 cut(s) 2314
EaeI YGGCCR 4 cut(s) 1438, 1472, 1850, 2246
EagI CGGCCG 1 cut(s) 1850
Eam1104I CTCTTC 4 cut(s) 925, 1557, 2178, 2754
EarI CTCTTC 4 cut(s) 925, 1557, 2178, 2754
Ecl136II GAGCTC 1 cut(s) 85
EclXI CGGCCG 1 cut(s) 1850
Eco130I CCWWGG 5 cut(s) 576, 717, 960, 1841, 2637
Eco24I GRGCYC 1 cut(s) 87
Eco31I GGTCTC 2 cut(s) 1670, 1877
Eco47I GGWCC 1 cut(s) 430
Eco52I CGGCCG 1 cut(s) 1850
Eco53kI GAGCTC 1 cut(s) 85
Eco57I CTGAAG 4 cut(s) 843, 1287, 1581, 2088
Eco81I CCTNAGG 2 cut(s) 1446, 2736
Eco88I CYCGRG 1 cut(s) 1946
EcoICRI GAGCTC 1 cut(s) 85
EcoNI CCTNNNNNAGG 1 cut(s) 701
EcoT14I CCWWGG 5 cut(s) 576, 717, 960, 1841, 2637
EcoT22I ATGCAT 1 cut(s) 1194
EcoT38I GRGCYC 1 cut(s) 87
ErhI CCWWGG 5 cut(s) 576, 717, 960, 1841, 2637
FalI AAGNNNNNCTT 8 cut(s) 147, 179, 1260, 1292, 2061, 2093, 2294, 2326
FaqI GGGAC 5 cut(s) 1219, 1653, 1828, 1919, 2424
FauI CCCGC 1 cut(s) 2031
FauNDI CATATG 1 cut(s) 216
FbaI TGATCA 3 cut(s) 793, 1732, 1789
FblI GTMKAC 1 cut(s) 2401
Fnu4HI GCNGC 9 cut(s) 32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
FriOI GRGCYC 1 cut(s) 87
Fsp4HI GCNGC 9 cut(s) 32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
FspBI CTAG 3 cut(s) 261, 1647, 2052
GlaI GCGC 1 cut(s) 162
GluI GCNGC 9 cut(s) 32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
GsuI CTGGAG 1 cut(s) 2547
HaeIII GGCC 6 cut(s) 1069, 1137, 1440, 1474, 1852, 2248
HapII CCGG 2 cut(s) 275, 1138
HgaI GACGC 1 cut(s) 1650
HhaI GCGC 1 cut(s) 163
Hin1I GRCGYC 1 cut(s) 1642
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HincII GTYRAC 1 cut(s) 2655
HindII GTYRAC 1 cut(s) 2655
HindIII AAGCTT 1 cut(s) 1859
HpaII CCGG 2 cut(s) 275, 1138
HphI GGTGA 4 cut(s) 835, 1920, 2681, 2850
Hpy166II GTNNAC 4 cut(s) 1259, 1574, 2402, 2655
Hpy188I TCNGA 7 cut(s) 124, 517, 624, 1102, 2446, 2482, 2569
Hpy8I GTNNAC 4 cut(s) 1259, 1574, 2402, 2655
HpyCH4IV ACGT 3 cut(s) 913, 2032, 2261
HpySE526I ACGT 3 cut(s) 913, 2032, 2261
Hsp92I GRCGYC 1 cut(s) 1642
HspAI GCGC 1 cut(s) 161
KpnI GGTACC 1 cut(s) 1050
Ksp22I TGATCA 3 cut(s) 793, 1732, 1789
LmnI GCTCC 5 cut(s) 28, 90, 1126, 2053, 2528
Lsp1109I GCAGC 7 cut(s) 43, 341, 389, 835, 1516, 1852, 1972
LweI GCATC 9 cut(s) 148, 248, 414, 835, 1179, 1427, 2035, 2428, 2830
MaeI CTAG 3 cut(s) 261, 1647, 2052
MaeII ACGT 3 cut(s) 913, 2032, 2261
MbiI CCGCTC 1 cut(s) 890
MfeI CAATTG 1 cut(s) 864
MflI RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
MhlI GDGCHC 4 cut(s) 87, 784, 988, 1555
MlsI TGGCCA 1 cut(s) 1440
MluNI TGGCCA 1 cut(s) 1440
MlyI GAGTC 7 cut(s) 911, 1324, 1759, 1763, 1934, 2492, 2711
MmeI TCCRAC 3 cut(s) 96, 516, 2847
Mox20I TGGCCA 1 cut(s) 1440
Mph1103I ATGCAT 1 cut(s) 1194
MroXI GAANNNNTTC 1 cut(s) 570
MscI TGGCCA 1 cut(s) 1440
MslI CAYNNNNRTG 4 cut(s) 219, 501, 561, 801
Msp20I TGGCCA 1 cut(s) 1440
MspA1I CMGCKG 3 cut(s) 1220, 1529, 2537
MspCI CTTAAG 2 cut(s) 35, 59
MspI CCGG 2 cut(s) 275, 1138
MunI CAATTG 1 cut(s) 864
Mva1269I GAATGC 1 cut(s) 1192
NcoI CCATGG 1 cut(s) 717
NdeI CATATG 1 cut(s) 216
NlaIV GGNNCC 7 cut(s) 781, 1048, 1086, 1453, 2140, 2530, 2803
NmeAIII GCCGAG 1 cut(s) 1878
NmuCI GTSAC 7 cut(s) 823, 914, 1288, 1327, 1366, 1912, 1926
NsiI ATGCAT 1 cut(s) 1194
NspI RCATGY 4 cut(s) 506, 523, 1700, 1907
NspV TTCGAA 1 cut(s) 2353
PagI TCATGA 1 cut(s) 556
PciI ACATGT 2 cut(s) 1696, 1903
PctI GAATGC 1 cut(s) 1192
PdmI GAANNNNTTC 1 cut(s) 570
PfeI GAWTC 9 cut(s) 806, 817, 971, 1040, 1159, 1457, 1601, 1715, 2384
PflFI GACNNNGTC 1 cut(s) 210
PkrI GCNGC 9 cut(s) 33, 331, 379, 850, 1531, 1851, 1867, 1962, 2250
PleI GAGTC 7 cut(s) 911, 1324, 1759, 1762, 1933, 2491, 2711
PpsI GAGTC 7 cut(s) 911, 1324, 1759, 1762, 1933, 2491, 2711
Ppu21I YACGTR 1 cut(s) 914
PscI ACATGT 2 cut(s) 1696, 1903
PshBI ATTAAT 2 cut(s) 185, 449
PsiI TTATAA 1 cut(s) 2322
Psp124BI GAGCTC 1 cut(s) 87
PspN4I GGNNCC 7 cut(s) 781, 1048, 1086, 1453, 2140, 2530, 2803
PspPI GGNCC 2 cut(s) 430, 1068
PstI CTGCAG 2 cut(s) 1723, 2584
PstNI CAGNNNCTG 1 cut(s) 1031
PsuI RGATCY 6 cut(s) 773, 1084, 1247, 1412, 2072, 2392
PsyI GACNNNGTC 1 cut(s) 210
PvuII CAGCTG 3 cut(s) 1220, 1529, 2537
RsaI GTAC 6 cut(s) 663, 695, 724, 1048, 1695, 2154
RsaNI GTAC 6 cut(s) 662, 694, 723, 1047, 1694, 2153
RseI CAYNNNNRTG 4 cut(s) 219, 501, 561, 801
SacI GAGCTC 1 cut(s) 87
SatI GCNGC 9 cut(s) 32, 330, 378, 849, 1530, 1850, 1866, 1961, 2249
Sau96I GGNCC 2 cut(s) 430, 1068
ScaI AGTACT 1 cut(s) 663
SchI GAGTC 7 cut(s) 911, 1324, 1759, 1763, 1934, 2492, 2711
SduI GDGCHC 4 cut(s) 87, 784, 988, 1555
SfaNI GCATC 9 cut(s) 148, 248, 414, 835, 1179, 1427, 2035, 2428, 2830
SfcI CTRYAG 6 cut(s) 192, 324, 1719, 1976, 2580, 2592
SfuI TTCGAA 1 cut(s) 2353
SinI GGWCC 1 cut(s) 430
SmiMI CAYNNNNRTG 4 cut(s) 219, 501, 561, 801
SmlI CTYRAG 3 cut(s) 23, 35, 59
SmoI CTYRAG 3 cut(s) 23, 35, 59
SsiI CCGC 6 cut(s) 888, 1849, 2038, 2215, 2249, 2467
SspI AATATT 1 cut(s) 470
SspMI CTAG 3 cut(s) 261, 1647, 2052
SstI GAGCTC 1 cut(s) 87
StyI CCWWGG 5 cut(s) 576, 717, 960, 1841, 2637
TaiI ACGT 3 cut(s) 916, 2035, 2264
TaqI TCGA 3 cut(s) 666, 1313, 2353
TatI WGTACW 2 cut(s) 661, 1693
TauI GCSGC 2 cut(s) 1852, 2251
TfiI GAWTC 9 cut(s) 806, 817, 971, 1040, 1159, 1457, 1601, 1715, 2384
TscAI CASTG 5 cut(s) 82, 256, 714, 2299, 2554
TseFI GTSAC 7 cut(s) 823, 914, 1288, 1327, 1366, 1912, 1926
TseI GCWGC 7 cut(s) 31, 329, 377, 848, 1529, 1865, 1960
Tsp45I GTSAC 7 cut(s) 823, 914, 1288, 1327, 1366, 1912, 1926
TspGWI ACGGA 2 cut(s) 997, 2672
TspRI CASTG 5 cut(s) 82, 256, 714, 2299, 2554
Tth111I GACNNNGTC 1 cut(s) 210
Vha464I CTTAAG 2 cut(s) 35, 59
VpaK11BI GGWCC 1 cut(s) 430
VspI ATTAAT 2 cut(s) 185, 449
XagI CCTNNNNNAGG 1 cut(s) 701
XapI RAATTY 6 cut(s) 309, 552, 570, 591, 1147, 1652
XceI RCATGY 4 cut(s) 506, 523, 1700, 1907
XcmI CCANNNNNNNNNTGG 2 cut(s) 773, 1078
XmiI GTMKAC 1 cut(s) 2401
XmnI GAANNNNTTC 1 cut(s) 570
XspI CTAG 3 cut(s) 261, 1647, 2052
ZrmI AGTACT 1 cut(s) 663
Zsp2I ATGCAT 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.