Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002985

Physical Location & Seq

Genomic Coordinates Reverse (-)

8900110 .. 8903428

Gene Structure 3319 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G25375.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGGAAATCTGAAACTTGCTTTGATCATCAAGAGCCCTAGAGACGACGTTGAGTTCCTACTCGAGAAGCAAAAACAGCCGGCGAAATTTGGAGATGAAGCTTACGATTCCTTTGTCGATTCCGATCTCTGGGACTTACCGTCAACAGATTTACAGGCTCTGGAAGACGGAGTGAGGTCCGGATTTAGTATTTCTATACTTGACTCATGCTCGGAGGAGGTTGATTTGATGAATTTCGACTTCGAATCCACACTGATTCTGCTGCTGGAGAATTTAGGGATTGATATTAGCGATGTAGGAGAGTGGAGATTCGTCAGGTCTGTAGAAGAGCCTGAGTTTGGACCTGACTCTTGTGTCCGTACTTGTTTTATCTCCGGGAAGCTCTTAAATACAGATCAAAGTTTACAAGACAACTGTAAGTGGATGTCAATGGAATCATGCTTCGACTCTCTTATAGATGTAAAATTGGGCAGTGATCGCGTTGGACCATTAGTACTACTTGGACTTGGGGATGGTTCCCGTCAGTCTATGAAGCATAAGTTGTCATCTTCTCTGGCTATCCAGGAATATCCACCTGGTGTTATGATTGTGCCGATGCATAGCAAAACATTGAAACCTTTCAGGACAACAAATTTGGTTGTGTTTGCTCCAGAAAATGGTTTGGGGGACCATCAAGGGGCTGATTTTGTAGCTCATGGGGATGCGTTGATAGTGGATCCTGGATGTCTCTCTAAACTCCACGTTGAGCTCAAGAAAATCGTTGATGCTTTACCTAGAAAGCTAATTGTCTTTGTTACACATCACCATCGTGATCACATTGATGGTCTTTCTGCTATACAAGAGAGCAATCCTGATGCTATTCTAGTGGCACATGCTAAAACTAGGCATCGCATTGGTGGTTGGTCTGGTAACTATACCCCAGTTTCTGGAGGAGAAAACATCTATGTCAACGGTCAAAAACTGACCGTCATTTTTGCTCCGGGACACACAGATGGTCATATGTCACTACTTCATACCTCCACTCAATCTCTGATTGTTGGTGATCATTGTGTTGGTCAAGGAAGTGCTTTCTTGGACATCAGGGCAGGTGGTAACATGACAGATTACTTTCAGTCGACATATAAATTCCTGGAGCTTTCTCCAAATGTGGTGATTCCCATGCATGGAAGGGTCAATTTGTGGCCGAAACACATGCTTTGTGGATATCTCAAAAACCGCAGAAGCAGAGAAAAATCAATCCTAAAGGCCACTGTGGATGGAGCTCAGACGTTATATGACATTGTTGCTAAGGTGTACTCAAGTGTGGATCGCAAATTCTGGTGGGCTGCATCATCAAACGTAAGGCTGCATATCGAGAAGCTGGCAGTAGAAAACAAATTACCAGAGGGATTCTCAATCCAAAAGTTCAAAGCAAGTTGCGGATTACGTTTTGCGATACGGTGTACAGTGGGTTATATCATTAGCAAGATTCCGTTCAAGATCAATAAGCCAGGTTTCATTATGTCAGTGATGGCTGCAGGAGCTGGATATTTTCTTCTGTACACATCCAAAAAGAAGAACCAGATTGAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0031974 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B

Protein Analysis

524

Amino Acids

58.07

Weight (kDa)

6.53

Isoelectric Point (pI)

40.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	232 - 388	1.1e-09	Metallo-beta-lactamase superfamily
WHD_BLACT	PF17778	423 - 459	3.6e-06	Beta-lactamase associated winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25375
fragaria_vesca	FvH4_4g26975 FvH4_4g26975 FvH4_4g26975 FvH4_4g26975
malus_domestica	MD13G1039000.v1.1 MD16G1039700.v1.1
prunus_persica	Prupe.1G314400_v2.0.a1 Prupe.1G314400_v2.0.a1
pyrus_communis	pycom16g03450
rosa_chinensis	RchiOBHm_Chr2g0108931 RchiOBHm_Chr4g0434781 RchiOBHm_Chr5g0042931 RchiOBHm_Chr6g0261541 RchiOBHm_Chr7g0243441
rosa_laevigata	RLG00000006650
rosa_multiflora	Rmu_sc0007829.1_g000001 Rmu_sc0017904.1_g000001 Rmu_sc0017904.1_g000002 Rmu_sc0026857.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312600 Rroxscaffold_5G00375980
rosa_rugosa	Rorug02G0079600 Rorug04G0278300 Rorug06G0479000
rosa_samantha	Rh2AG012800 Rh2BG218400 Rh2CG210400 Rh2DG354000 Rh2DG354100 Rh4AG334700 Rh4BG343300 Rh4CG357700 Rh4DG337000 Rh7BG078500
rosa_wichuraiana	Rw1G015910 Rw4G029190 Rw7G037630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1076
AasI	GACNNNNNNGTC	1 cut(s)	353
Acc36I	ACCTGC	1 cut(s)	1076
AccB7I	CCANNNNNTGG	2 cut(s)	656, 926
AccI	GTMKAC	1 cut(s)	1115
AccII	CGCG	1 cut(s)	480
AccIII	TCCGGA	1 cut(s)	179
AciI	CCGC	2 cut(s)	1216, 1419
AclWI	GGATC	3 cut(s)	710, 723, 1314
AcoI	YGGCCR	1 cut(s)	1181
AcsI	RAATTY	6 cut(s)	86, 232, 271, 631, 1124, 1313
AdeI	CACNNNGTG	1 cut(s)	578
AfaI	GTAC	5 cut(s)	361, 495, 1295, 1444, 1541
AfiI	CCNNNNNNNGG	6 cut(s)	129, 338, 656, 676, 926, 1163
AgsI	TTSAA	4 cut(s)	613, 1408, 1477, 1568
AhdI	GACNNNNNGTC	1 cut(s)	139
AjnI	CCWGG	5 cut(s)	561, 574, 718, 1128, 1489
AleI	CACNNNNGTG	1 cut(s)	807
AluBI	AGCT	9 cut(s)	101, 382, 692, 748, 781, 1135, 1262, 1360, 1523
AluI	AGCT	9 cut(s)	101, 382, 692, 748, 781, 1135, 1262, 1360, 1523
Alw21I	GWGCWC	2 cut(s)	750, 1264
Alw26I	GTCTC	2 cut(s)	36, 731
AlwI	GGATC	3 cut(s)	710, 723, 1314
AlwNI	CAGNNNCTG	3 cut(s)	160, 926, 1523
Ama87I	CYCGRG	1 cut(s)	62
Aor13HI	TCCGGA	1 cut(s)	179
AoxI	GGCC	2 cut(s)	1181, 1245
ApeKI	GCWGC	4 cut(s)	262, 1325, 1345, 1514
ApoI	RAATTY	6 cut(s)	86, 232, 271, 631, 1124, 1313
ArsI	GACNNNNNNTTYG	2 cut(s)	616, 648
Asp700I	GAANNNNTTC	1 cut(s)	617
AspS9I	GGNCC	4 cut(s)	177, 341, 485, 667
AsuC2I	CCSGG	2 cut(s)	376, 981
AsuHPI	GGTGA	3 cut(s)	794, 1052, 1162
AsuII	TTCGAA	1 cut(s)	243
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	4 cut(s)	177, 341, 485, 667
BamHI	GGATCC	1 cut(s)	715
BanII	GRGCYC	3 cut(s)	38, 750, 1264
BbsI	GAAGAC	1 cut(s)	171
Bbv12I	GWGCWC	2 cut(s)	750, 1264
BbvI	GCAGC	4 cut(s)	249, 1312, 1332, 1501
BccI	CCATC	7 cut(s)	506, 678, 813, 815, 986, 1250, 1504
BcgI	CGANNNNNNTGC	2 cut(s)	1174, 1208
BciT130I	CCWGG	5 cut(s)	563, 576, 720, 1130, 1491
BclI	TGATCA	3 cut(s)	24, 811, 1042
BcnI	CCSGG	2 cut(s)	376, 981
BcoDI	GTCTC	2 cut(s)	36, 731
BfaI	CTAG	4 cut(s)	39, 774, 863, 882
BfmI	CTRYAG	2 cut(s)	321, 1515
BfuAI	ACCTGC	1 cut(s)	1076
BisI	GCNGC	4 cut(s)	263, 1326, 1346, 1515
BlsI	GCNGC	4 cut(s)	264, 1327, 1347, 1516
BmcAI	AGTACT	1 cut(s)	495
Bme1390I	CCNGG	7 cut(s)	376, 563, 576, 720, 981, 1130, 1491
Bme18I	GGWCC	4 cut(s)	177, 341, 485, 667
BmeRI	GACNNNNNGTC	1 cut(s)	139
BmeT110I	CYCGRG	1 cut(s)	62
BmgT120I	GGNCC	4 cut(s)	177, 341, 485, 667
BmiI	GGNNCC	3 cut(s)	517, 668, 717
BmrFI	CCNGG	7 cut(s)	376, 563, 576, 720, 981, 1130, 1491
BmrI	ACTGGG	1 cut(s)	914
BmsI	GCATC	6 cut(s)	585, 691, 754, 844, 895, 1337
BmuI	ACTGGG	1 cut(s)	914
BpiI	GAAGAC	1 cut(s)	171
BplI	GAGNNNNNCTC	2 cut(s)	1376, 1408
BpmI	CTGGAG	4 cut(s)	287, 633, 948, 1151
Bpu10I	CCTNAGC	1 cut(s)	1287
Bpu14I	TTCGAA	1 cut(s)	243
BpuEI	CTTGAG	2 cut(s)	734, 1282
BpuMI	CCSGG	2 cut(s)	376, 981
BsaBI	GATNNNNATC	1 cut(s)	123
BsaWI	WCCGGW	1 cut(s)	179
Bsc4I	CCNNNNNNNGG	6 cut(s)	129, 338, 656, 676, 926, 1163
Bse118I	RCCGGY	1 cut(s)	79
Bse1I	ACTGG	1 cut(s)	920
Bse8I	GATNNNNATC	1 cut(s)	123
BseAI	TCCGGA	1 cut(s)	179
BseBI	CCWGG	5 cut(s)	563, 576, 720, 1130, 1491
BseGI	GGATG	6 cut(s)	429, 517, 706, 728, 1261, 1544
BseJI	GATNNNNATC	1 cut(s)	123
BseLI	CCNNNNNNNGG	6 cut(s)	129, 338, 656, 676, 926, 1163
BseMII	CTCAG	2 cut(s)	324, 1277
BseNI	ACTGG	1 cut(s)	920
BseRI	GAGGAG	2 cut(s)	230, 945
BseXI	GCAGC	4 cut(s)	249, 1312, 1332, 1501
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	2 cut(s)	1183, 1247
BsiHKAI	GWGCWC	2 cut(s)	750, 1264
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	4 cut(s)	80, 180, 375, 980
BslFI	GGGAC	3 cut(s)	146, 680, 996
BslI	CCNNNNNNNGG	6 cut(s)	129, 338, 656, 676, 926, 1163
BsmAI	GTCTC	2 cut(s)	36, 731
BsmBI	CGTCTC	1 cut(s)	36
BsmFI	GGGAC	3 cut(s)	146, 680, 996
BsnI	GGCC	2 cut(s)	1183, 1247
BsoBI	CYCGRG	1 cut(s)	62
Bsp119I	TTCGAA	1 cut(s)	243
Bsp1286I	GDGCHC	3 cut(s)	38, 750, 1264
Bsp13I	TCCGGA	1 cut(s)	179
Bsp1407I	TGTACA	2 cut(s)	1442, 1539
Bsp143I	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
BspACI	CCGC	2 cut(s)	1216, 1419
BspANI	GGCC	2 cut(s)	1183, 1247
BspCNI	CTCAG	2 cut(s)	325, 1276
BspEI	TCCGGA	1 cut(s)	179
BspFNI	CGCG	1 cut(s)	480
BspLI	GGNNCC	3 cut(s)	517, 668, 717
BspMAI	CTGCAG	1 cut(s)	1519
BspMI	ACCTGC	1 cut(s)	1076
BspPI	GGATC	3 cut(s)	710, 723, 1314
BspQI	GCTCTTC	1 cut(s)	321
BspT104I	TTCGAA	1 cut(s)	243
BsrFI	RCCGGY	1 cut(s)	79
BsrGI	TGTACA	2 cut(s)	1442, 1539
BsrI	ACTGG	1 cut(s)	920
BssAI	RCCGGY	1 cut(s)	79
BssMI	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
Bst2UI	CCWGG	5 cut(s)	563, 576, 720, 1130, 1491
Bst4CI	ACNGT	7 cut(s)	141, 416, 953, 967, 1252, 1440, 1447
Bst6I	CTCTTC	1 cut(s)	321
BstAUI	TGTACA	2 cut(s)	1442, 1539
BstBI	TTCGAA	1 cut(s)	243
BstC8I	GCNNGC	2 cut(s)	81, 1362
BstDEI	CTNAG	3 cut(s)	333, 1263, 1287
BstF5I	GGATG	6 cut(s)	429, 517, 706, 728, 1261, 1544
BstFNI	CGCG	1 cut(s)	480
BstKTI	GATC	9 cut(s)	27, 127, 397, 478, 718, 814, 1045, 1309, 1482
BstMAI	GTCTC	2 cut(s)	36, 731
BstMBI	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
BstMWI	GCNNNNNNNGC	3 cut(s)	76, 477, 1520
BstNI	CCWGG	5 cut(s)	563, 576, 720, 1130, 1491
BstNSI	RCATGY	2 cut(s)	875, 1195
BstSCI	CCNGG	7 cut(s)	374, 561, 574, 718, 979, 1128, 1489
BstSFI	CTRYAG	2 cut(s)	321, 1515
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	4 cut(s)	249, 1312, 1332, 1501
BstV2I	GAAGAC	1 cut(s)	171
BstX2I	RGATCY	1 cut(s)	715
BstYI	RGATCY	1 cut(s)	715
BsuRI	GGCC	2 cut(s)	1183, 1247
BtgZI	GCGATG	2 cut(s)	306, 872
BtsCI	GGATG	6 cut(s)	429, 517, 706, 728, 1261, 1544
BtsI	GCAGTG	1 cut(s)	478
BtsIMutI	CAGTG	5 cut(s)	251, 478, 1248, 1452, 1512
BveI	ACCTGC	1 cut(s)	1076
Cac8I	GCNNGC	2 cut(s)	81, 1362
CaiI	CAGNNNCTG	3 cut(s)	160, 926, 1523
Cfr10I	RCCGGY	1 cut(s)	79
Cfr13I	GGNCC	4 cut(s)	177, 341, 485, 667
CsiI	ACCWGGT	1 cut(s)	574
Csp6I	GTAC	5 cut(s)	360, 494, 1294, 1443, 1540
CviAII	CATG	8 cut(s)	207, 438, 695, 872, 1096, 1159, 1163, 1192
CviQI	GTAC	5 cut(s)	360, 494, 1294, 1443, 1540
DdeI	CTNAG	3 cut(s)	333, 1263, 1287
DpnI	GATC	9 cut(s)	26, 126, 396, 477, 717, 813, 1044, 1308, 1481
DpnII	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
DraIII	CACNNNGTG	1 cut(s)	578
DrdI	GACNNNNNNGTC	1 cut(s)	353
DriI	GACNNNNNGTC	1 cut(s)	139
DseDI	GACNNNNNNGTC	1 cut(s)	353
EaeI	YGGCCR	1 cut(s)	1181
Eam1104I	CTCTTC	1 cut(s)	321
Eam1105I	GACNNNNNGTC	1 cut(s)	139
EarI	CTCTTC	1 cut(s)	321
Ecl136II	GAGCTC	2 cut(s)	748, 1262
Eco24I	GRGCYC	3 cut(s)	38, 750, 1264
Eco32I	GATATC	1 cut(s)	1205
Eco47I	GGWCC	4 cut(s)	177, 341, 485, 667
Eco53kI	GAGCTC	2 cut(s)	748, 1262
Eco88I	CYCGRG	1 cut(s)	62
EcoICRI	GAGCTC	2 cut(s)	748, 1262
EcoRII	CCWGG	5 cut(s)	561, 574, 718, 1128, 1489
EcoRV	GATATC	1 cut(s)	1205
EcoT22I	ATGCAT	2 cut(s)	600, 1164
EcoT38I	GRGCYC	3 cut(s)	38, 750, 1264
Esp3I	CGTCTC	1 cut(s)	36
FaeI	CATG	8 cut(s)	210, 441, 698, 875, 1099, 1162, 1166, 1195
FaqI	GGGAC	3 cut(s)	146, 680, 996
FatI	CATG	8 cut(s)	206, 437, 694, 871, 1095, 1158, 1162, 1191
FauNDI	CATATG	1 cut(s)	999
FbaI	TGATCA	3 cut(s)	24, 811, 1042
FblI	GTMKAC	1 cut(s)	1115
Fnu4HI	GCNGC	4 cut(s)	263, 1326, 1346, 1515
FokI	GGATG	6 cut(s)	436, 524, 713, 735, 1268, 1531
FriOI	GRGCYC	3 cut(s)	38, 750, 1264
Fsp4HI	GCNGC	4 cut(s)	263, 1326, 1346, 1515
FspBI	CTAG	4 cut(s)	39, 774, 863, 882
GluI	GCNGC	4 cut(s)	263, 1326, 1346, 1515
GsuI	CTGGAG	4 cut(s)	287, 633, 948, 1151
HaeIII	GGCC	2 cut(s)	1183, 1247
HapII	CCGG	4 cut(s)	80, 180, 375, 980
Hin1II	CATG	8 cut(s)	210, 441, 698, 875, 1099, 1162, 1166, 1195
HincII	GTYRAC	3 cut(s)	144, 949, 1116
HindII	GTYRAC	3 cut(s)	144, 949, 1116
HindIII	AAGCTT	1 cut(s)	99
HpaII	CCGG	4 cut(s)	80, 180, 375, 980
HphI	GGTGA	3 cut(s)	794, 1052, 1162
Hpy166II	GTNNAC	7 cut(s)	144, 404, 949, 1116, 1294, 1443, 1542
Hpy188I	TCNGA	5 cut(s)	12, 124, 214, 1032, 1266
Hpy8I	GTNNAC	7 cut(s)	144, 404, 949, 1116, 1294, 1443, 1542
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	1 cut(s)	1161
HpyCH4III	ACNGT	7 cut(s)	141, 416, 953, 967, 1252, 1440, 1447
HpyCH4IV	ACGT	5 cut(s)	48, 741, 1268, 1338, 1426
HpyCH4V	TGCA	5 cut(s)	598, 1162, 1328, 1348, 1517
HpyF10VI	GCNNNNNNNGC	3 cut(s)	76, 477, 1520
HpyF3I	CTNAG	3 cut(s)	333, 1263, 1287
HpySE526I	ACGT	5 cut(s)	48, 741, 1268, 1338, 1426
Hsp92II	CATG	8 cut(s)	210, 441, 698, 875, 1099, 1162, 1166, 1195
Kpn2I	TCCGGA	1 cut(s)	179
KroI	GCCGGC	1 cut(s)	79
KroNI	GCCGGC	1 cut(s)	81
Ksp22I	TGATCA	3 cut(s)	24, 811, 1042
Kzo9I	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
LguI	GCTCTTC	1 cut(s)	321
LmnI	GCTCC	5 cut(s)	652, 982, 1132, 1259, 1520
Lsp1109I	GCAGC	4 cut(s)	249, 1312, 1332, 1501
LweI	GCATC	6 cut(s)	585, 691, 754, 844, 895, 1337
MabI	ACCWGGT	1 cut(s)	574
MaeI	CTAG	4 cut(s)	39, 774, 863, 882
MaeII	ACGT	5 cut(s)	48, 741, 1268, 1338, 1426
MaeIII	GTNAC	4 cut(s)	793, 908, 1002, 1091
MalI	GATC	9 cut(s)	26, 126, 396, 477, 717, 813, 1044, 1308, 1481
MboI	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
MboII	GAAGA	5 cut(s)	176, 338, 540, 1526, 1567
MflI	RGATCY	1 cut(s)	715
MhlI	GDGCHC	3 cut(s)	38, 750, 1264
MlyI	GAGTC	3 cut(s)	197, 341, 440
MmeI	TCCRAC	1 cut(s)	463
MnlI	CCTC	6 cut(s)	168, 208, 211, 923, 1027, 1378
Mph1103I	ATGCAT	2 cut(s)	600, 1164
MroI	TCCGGA	1 cut(s)	179
MroNI	GCCGGC	1 cut(s)	79
MroXI	GAANNNNTTC	1 cut(s)	617
MseI	TTAA	1 cut(s)	386
MslI	CAYNNNNRTG	4 cut(s)	699, 807, 819, 990
MspI	CCGG	4 cut(s)	80, 180, 375, 980
MspR9I	CCNGG	7 cut(s)	376, 563, 576, 720, 981, 1130, 1491
MvaI	CCWGG	5 cut(s)	563, 576, 720, 1130, 1491
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	3 cut(s)	76, 477, 1520
NaeI	GCCGGC	1 cut(s)	81
NciI	CCSGG	2 cut(s)	376, 981
NdeI	CATATG	1 cut(s)	999
NdeII	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
NgoMIV	GCCGGC	1 cut(s)	79
NlaIII	CATG	8 cut(s)	210, 441, 698, 875, 1099, 1162, 1166, 1195
NlaIV	GGNNCC	3 cut(s)	517, 668, 717
NmuCI	GTSAC	1 cut(s)	1002
NsiI	ATGCAT	2 cut(s)	600, 1164
NspI	RCATGY	2 cut(s)	875, 1195
NspV	TTCGAA	1 cut(s)	243
OliI	CACNNNNGTG	1 cut(s)	807
PaeR7I	CTCGAG	1 cut(s)	62
PaqCI	CACCTGC	1 cut(s)	1076
PciSI	GCTCTTC	1 cut(s)	321
PdiI	GCCGGC	1 cut(s)	81
PdmI	GAANNNNTTC	1 cut(s)	617
PflMI	CCANNNNNTGG	2 cut(s)	656, 926
PfoI	TCCNGGA	5 cut(s)	374, 561, 718, 979, 1128
PkrI	GCNGC	4 cut(s)	264, 1327, 1347, 1516
PleI	GAGTC	3 cut(s)	197, 341, 440
PpsI	GAGTC	3 cut(s)	197, 341, 440
Psp124BI	GAGCTC	2 cut(s)	750, 1264
Psp6I	CCWGG	5 cut(s)	561, 574, 718, 1128, 1489
PspGI	CCWGG	5 cut(s)	561, 574, 718, 1128, 1489
PspN4I	GGNNCC	3 cut(s)	517, 668, 717
PspPI	GGNCC	4 cut(s)	177, 341, 485, 667
PstI	CTGCAG	1 cut(s)	1519
PstNI	CAGNNNCTG	3 cut(s)	160, 926, 1523
PsuI	RGATCY	1 cut(s)	715
RsaI	GTAC	5 cut(s)	361, 495, 1295, 1444, 1541
RsaNI	GTAC	5 cut(s)	360, 494, 1294, 1443, 1540
RseI	CAYNNNNRTG	4 cut(s)	699, 807, 819, 990
SacI	GAGCTC	2 cut(s)	750, 1264
SalI	GTCGAC	1 cut(s)	1114
SapI	GCTCTTC	1 cut(s)	321
SaqAI	TTAA	1 cut(s)	386
SatI	GCNGC	4 cut(s)	263, 1326, 1346, 1515
Sau3AI	GATC	9 cut(s)	24, 124, 394, 475, 715, 811, 1042, 1306, 1479
Sau96I	GGNCC	4 cut(s)	177, 341, 485, 667
ScaI	AGTACT	1 cut(s)	495
SchI	GAGTC	3 cut(s)	197, 341, 440
ScrFI	CCNGG	7 cut(s)	376, 563, 576, 720, 981, 1130, 1491
SduI	GDGCHC	3 cut(s)	38, 750, 1264
SexAI	ACCWGGT	1 cut(s)	574
SfaNI	GCATC	6 cut(s)	585, 691, 754, 844, 895, 1337
SfcI	CTRYAG	2 cut(s)	321, 1515
Sfr274I	CTCGAG	1 cut(s)	62
SfuI	TTCGAA	1 cut(s)	243
SinI	GGWCC	4 cut(s)	177, 341, 485, 667
SlaI	CTCGAG	1 cut(s)	62
SmiMI	CAYNNNNRTG	4 cut(s)	699, 807, 819, 990
SmlI	CTYRAG	3 cut(s)	62, 749, 1297
SmoI	CTYRAG	3 cut(s)	62, 749, 1297
SsiI	CCGC	2 cut(s)	1216, 1419
SspMI	CTAG	4 cut(s)	39, 774, 863, 882
SstI	GAGCTC	2 cut(s)	750, 1264
StyD4I	CCNGG	7 cut(s)	374, 561, 574, 718, 979, 1128, 1489
TaaI	ACNGT	7 cut(s)	141, 416, 953, 967, 1252, 1440, 1447
TaiI	ACGT	5 cut(s)	51, 744, 1271, 1341, 1429
TaqI	TCGA	7 cut(s)	63, 117, 237, 243, 444, 1115, 1353
TatI	WGTACW	4 cut(s)	493, 1293, 1442, 1539
Tru1I	TTAA	1 cut(s)	386
Tru9I	TTAA	1 cut(s)	386
TscAI	CASTG	5 cut(s)	258, 478, 1255, 1452, 1512
TseFI	GTSAC	1 cut(s)	1002
TseI	GCWGC	4 cut(s)	262, 1325, 1345, 1514
Tsp45I	GTSAC	1 cut(s)	1002
TspDTI	ATGAA	5 cut(s)	111, 245, 545, 1001, 1486
TspGWI	ACGGA	3 cut(s)	183, 347, 1461
TspRI	CASTG	5 cut(s)	258, 478, 1255, 1452, 1512
Van91I	CCANNNNNTGG	2 cut(s)	656, 926
VpaK11BI	GGWCC	4 cut(s)	177, 341, 485, 667
XapI	RAATTY	6 cut(s)	86, 232, 271, 631, 1124, 1313
XceI	RCATGY	2 cut(s)	875, 1195
XhoI	CTCGAG	1 cut(s)	62
XmiI	GTMKAC	1 cut(s)	1115
XmnI	GAANNNNTTC	1 cut(s)	617
XspI	CTAG	4 cut(s)	39, 774, 863, 882
ZrmI	AGTACT	1 cut(s)	495
Zsp2I	ATGCAT	2 cut(s)	600, 1164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.