Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002985

Physical Location & Seq

Genomic Coordinates Reverse (-)

28159768 .. 28164771

Gene Structure 5004 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g26975.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGCAATGCATCACAAGCTCGCCGTGATCCTCGATCACCCTCAAAACGACGCCGCATTCCTCCTCGTGAAGCAGACGCGCCCTCCCAAATTCGACGACGAGGAGTACGATTCCTTCGTCGATTCCGACCTCTGGGACTTGCCCTCCGCGCAATTAAACCTTCTAGAACCACAATCCCGGCCCTCAATCGCAGTTCACGGCGCCGAGTCGTGGTCAAACAAGATAGAGTTGACCAAATTTGACCTGGATTCCGCTCTCAATCAGATTTTGGAGCAAGTAGGGTTTAAGGCCGATGATGCTGGAGAGTGGAGGTTGTGGAAGTATGTGGAGGAAGCTCAGTTTGGGCCTGGACCGCCTATCGATTCGGTGTTTGTTAGGGGAAAATTGGTGGCTGCTCATCGAAATTTACAAGAGACGTGTAAGTGGATGTCTGTCGAGAGCTGTCTAAGCTGGCTTCAGGAAGTGAAACCGAGGAGTGAGCGTGTGGGGCATTTGATAGTTGCTGGCCTTGAAAATGAGTTTGCGCAAACAAGAGAATTGAAGATTCCGTTGAGCTTACCTTACCAGGAGTACCCTCCTGGTGTTGTGCTTGTGCCTATGGGAAGCAGGACAGGAAAACCTTTTCGCACAACAAACTTGGTTGTTTTCGCACCTAAAAATGTTCTGAATGATTGTCGAGAGGATGGTTTTATTGCGTGTGGAGATGCTTTGATAGTGGATCCTGGGTGTCAATCCAAATTCCATGAAGAGCTCAGACAAATTGTAGCTGCTTTGCCAAGAAAATTAATTGTCTTTGTTACTCATCACCATCATGATCATGTGGACGGTCTCTCAGTTATTCAACGTTGCAATCCAGAGGCTACATTATTAGCACATGAAAACACTATGCGACGCATTAGAAAAGATGACTGGTCTCTCGGCTTTACTGCAATTTCTGGCACTGAAGAAATTTGCATTGGTGGTCAGCGGTTGACTGCAATTTTCTCTCCGGGACATACAGATGGCCATATGGGGCTGCTTCATGCCAGTACTCACTCCTTGATTGTTGGTGATCATTGTGTGGGTCAAGGTAGTGCTATACTGGATGTTACTTCCGGTGGAAATATGACTGATTACTTTCAATCTACATTCAAATTTATGGAGATTTCCCCTCATGCTTTGATCCCCATGCATGGGAGAGTTAACCTATGGCCTAACCACATGCTTTGTGGATATCTCAGGAATCGCAGAGGCAGAGAAAGTTCCATCTTGAAAGCGATAGAAAATGGAGCAGAAACATTATTTGACATAGTTGCAAATGTATATTGTGATGTTGATCGTAGCTATTGGGTTCCTGCTGCGTCAAATGTGAGGCTTCATGTGGATCATCTAGCCCAGCAAGATAAGTTGCCAAAGGCATTTTCGATCCAGAAGTTTCAGAAAACATGTAGACTGCATTTCTTCTCTCGATGGATGTGGGCTTACCTCAGTAACGGTGTCCTCGTAAATTGTTTGAAGCCAAGAATATCTCATCTTCTTGTTGGCGTTGTAGCTAGCTCAGCTGTGTTATACATGTTTAAAAGACGGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0031974 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B

Protein Analysis

524

Amino Acids

58.91

Weight (kDa)

6.58

Isoelectric Point (pI)

44.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	233 - 354	1.6e-07	Metallo-beta-lactamase superfamily
WHD_BLACT	PF17778	426 - 462	2.3e-06	Beta-lactamase associated winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25375
fragaria_vesca	FvH4_4g26975 FvH4_4g26975 FvH4_4g26975 FvH4_4g26975
malus_domestica	MD13G1039000.v1.1 MD16G1039700.v1.1
prunus_persica	Prupe.1G314400_v2.0.a1 Prupe.1G314400_v2.0.a1
pyrus_communis	pycom16g03450
rosa_chinensis	RchiOBHm_Chr2g0108931 RchiOBHm_Chr4g0434781 RchiOBHm_Chr5g0042931 RchiOBHm_Chr6g0261541 RchiOBHm_Chr7g0243441
rosa_laevigata	RLG00000006650
rosa_multiflora	Rmu_sc0007829.1_g000001 Rmu_sc0017904.1_g000001 Rmu_sc0017904.1_g000002 Rmu_sc0026857.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312600 Rroxscaffold_5G00375980
rosa_rugosa	Rorug02G0079600 Rorug04G0278300 Rorug06G0479000
rosa_samantha	Rh2AG012800 Rh2BG218400 Rh2CG210400 Rh2DG354000 Rh2DG354100 Rh4AG334700 Rh4BG343300 Rh4CG357700 Rh4DG337000 Rh7BG078500
rosa_wichuraiana	Rw1G015910 Rw4G029190 Rw7G037630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	525
AccB1I	GGYRCC	1 cut(s)	200
AccBSI	CCGCTC	1 cut(s)	254
AccI	GTMKAC	1 cut(s)	1429
AccII	CGCG	2 cut(s)	79, 149
AciI	CCGC	5 cut(s)	54, 147, 252, 353, 967
AclI	AACGTT	1 cut(s)	844
AclWI	GGATC	6 cut(s)	22, 713, 726, 1156, 1371, 1399
AcoI	YGGCCR	1 cut(s)	1003
AcsI	RAATTY	6 cut(s)	89, 236, 403, 737, 948, 1133
AcuI	CTGAAG	2 cut(s)	440, 963
AcyI	GRCGYC	2 cut(s)	51, 201
AfaI	GTAC	3 cut(s)	107, 572, 1030
AfiI	CCNNNNNNNGG	4 cut(s)	132, 210, 1172, 1173
AflIII	ACRYGT	3 cut(s)	416, 1424, 1551
AgsI	TTSAA	7 cut(s)	512, 541, 842, 1121, 1132, 1252, 1495
AjiI	CACGTC	1 cut(s)	417
AjnI	CCWGG	5 cut(s)	243, 346, 564, 577, 721
AjuI	GAANNNNNNNTTGG	6 cut(s)	324, 356, 939, 971, 1384, 1416
Alw21I	GWGCWC	1 cut(s)	753
Alw26I	GTCTC	3 cut(s)	407, 833, 918
AlwI	GGATC	6 cut(s)	22, 713, 726, 1156, 1371, 1399
AoxI	GGCC	6 cut(s)	179, 288, 344, 505, 1003, 1190
ApeKI	GCWGC	4 cut(s)	392, 767, 1015, 1337
ApoI	RAATTY	6 cut(s)	89, 236, 403, 737, 948, 1133
AseI	ATTAAT	1 cut(s)	785
AspLEI	GCGC	4 cut(s)	81, 151, 203, 526
AspS9I	GGNCC	3 cut(s)	180, 344, 350
AsuC2I	CCSGG	2 cut(s)	178, 990
AsuHPI	GGTGA	3 cut(s)	29, 797, 1061
AsuNHI	GCTAGC	1 cut(s)	1532
AvaII	GGWCC	1 cut(s)	350
BalI	TGGCCA	1 cut(s)	1005
BamHI	GGATCC	1 cut(s)	718
BanI	GGYRCC	1 cut(s)	200
BanII	GRGCYC	1 cut(s)	753
BarI	GAAGNNNNNNTAC	2 cut(s)	98, 130
BauI	CACGAG	1 cut(s)	65
Bbv12I	GWGCWC	1 cut(s)	753
BbvI	GCAGC	4 cut(s)	379, 754, 1002, 1324
BccI	CCATC	5 cut(s)	677, 816, 995, 1253, 1443
BceAI	ACGGC	2 cut(s)	8, 214
BciT130I	CCWGG	5 cut(s)	245, 348, 566, 579, 723
BclI	TGATCA	2 cut(s)	814, 1051
BcnI	CCSGG	2 cut(s)	178, 990
BcoDI	GTCTC	3 cut(s)	407, 833, 918
BfaI	CTAG	3 cut(s)	164, 1370, 1533
BfoI	RGCGCY	1 cut(s)	204
BisI	GCNGC	5 cut(s)	54, 393, 768, 1016, 1338
BlpI	GCTNAGC	1 cut(s)	1537
BlsI	GCNGC	5 cut(s)	55, 394, 769, 1017, 1339
BmcAI	AGTACT	1 cut(s)	1030
Bme1390I	CCNGG	7 cut(s)	178, 245, 348, 566, 579, 723, 990
Bme18I	GGWCC	1 cut(s)	350
BmgBI	CACGTC	1 cut(s)	417
BmgT120I	GGNCC	3 cut(s)	180, 344, 350
BmiI	GGNNCC	3 cut(s)	202, 720, 1332
BmrFI	CCNGG	7 cut(s)	178, 245, 348, 566, 579, 723, 990
BmsI	GCATC	3 cut(s)	19, 286, 694
BmtI	GCTAGC	1 cut(s)	1536
BpmI	CTGGAG	1 cut(s)	321
Bpu1102I	GCTNAGC	1 cut(s)	1537
BpuMI	CCSGG	2 cut(s)	178, 990
Bsa29I	ATCGAT	1 cut(s)	360
BsaBI	GATNNNNATC	1 cut(s)	1314
BsaHI	GRCGYC	2 cut(s)	51, 201
BsaI	GGTCTC	2 cut(s)	833, 918
BsaJI	CCNNGG	2 cut(s)	470, 722
BsaWI	WCCGGW	1 cut(s)	1094
BsaXI	ACNNNNNCTCC	6 cut(s)	67, 97, 128, 158, 466, 496
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 210, 1172, 1173
Bse1I	ACTGG	3 cut(s)	914, 1026, 1086
Bse3DI	GCAATG	1 cut(s)	12
Bse8I	GATNNNNATC	1 cut(s)	1314
BseBI	CCWGG	5 cut(s)	245, 348, 566, 579, 723
BseCI	ATCGAT	1 cut(s)	360
BseDI	CCNNGG	2 cut(s)	470, 722
BseGI	GGATG	4 cut(s)	432, 688, 1090, 1458
BseJI	GATNNNNATC	1 cut(s)	1314
BseLI	CCNNNNNNNGG	4 cut(s)	132, 210, 1172, 1173
BseMI	GCAATG	1 cut(s)	12
BseMII	CTCAG	6 cut(s)	350, 766, 846, 1231, 1480, 1551
BseNI	ACTGG	3 cut(s)	914, 1026, 1086
BseRI	GAGGAG	3 cut(s)	53, 116, 487
BseXI	GCAGC	4 cut(s)	379, 754, 1002, 1324
BseYI	CCCAGC	1 cut(s)	1374
Bsh1236I	CGCG	2 cut(s)	79, 149
BshFI	GGCC	6 cut(s)	181, 290, 346, 507, 1005, 1192
BshNI	GGYRCC	1 cut(s)	200
BshVI	ATCGAT	1 cut(s)	360
BsiHKAI	GWGCWC	1 cut(s)	753
BsiSI	CCGG	3 cut(s)	178, 989, 1095
BslFI	GGGAC	2 cut(s)	149, 1005
BslI	CCNNNNNNNGG	4 cut(s)	132, 210, 1172, 1173
BsmAI	GTCTC	3 cut(s)	407, 833, 918
BsmBI	CGTCTC	1 cut(s)	407
BsmFI	GGGAC	2 cut(s)	149, 1005
BsmI	GAATGC	1 cut(s)	56
BsnI	GGCC	6 cut(s)	181, 290, 346, 507, 1005, 1192
Bso31I	GGTCTC	2 cut(s)	833, 918
Bsp1286I	GDGCHC	1 cut(s)	753
Bsp143I	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
Bsp1720I	GCTNAGC	1 cut(s)	1537
BspACI	CCGC	5 cut(s)	54, 147, 252, 353, 967
BspANI	GGCC	6 cut(s)	181, 290, 346, 507, 1005, 1192
BspCNI	CTCAG	6 cut(s)	349, 765, 845, 1230, 1479, 1550
BspDI	ATCGAT	1 cut(s)	360
BspFNI	CGCG	2 cut(s)	79, 149
BspHI	TCATGA	1 cut(s)	811
BspLI	GGNNCC	3 cut(s)	202, 720, 1332
BspOI	GCTAGC	1 cut(s)	1536
BspPI	GGATC	6 cut(s)	22, 713, 726, 1156, 1371, 1399
BspQI	GCTCTTC	1 cut(s)	741
BspT107I	GGYRCC	1 cut(s)	200
BspTNI	GGTCTC	2 cut(s)	833, 918
BsrBI	CCGCTC	1 cut(s)	254
BsrDI	GCAATG	1 cut(s)	12
BsrI	ACTGG	3 cut(s)	914, 1026, 1086
BssECI	CCNNGG	2 cut(s)	470, 722
BssMI	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
BssNI	GRCGYC	2 cut(s)	51, 201
BssSI	CACGAG	1 cut(s)	65
Bst2BI	CACGAG	1 cut(s)	65
Bst2UI	CCWGG	5 cut(s)	245, 348, 566, 579, 723
Bst4CI	ACNGT	2 cut(s)	827, 1475
Bst6I	CTCTTC	1 cut(s)	741
BstACI	GRCGYC	2 cut(s)	51, 201
BstC8I	GCNNGC	4 cut(s)	21, 452, 505, 1534
BstDEI	CTNAG	7 cut(s)	336, 446, 752, 832, 1217, 1466, 1537
BstF5I	GGATG	4 cut(s)	432, 688, 1090, 1458
BstFNI	CGCG	2 cut(s)	79, 149
BstH2I	RGCGCY	1 cut(s)	204
BstHHI	GCGC	4 cut(s)	81, 151, 203, 526
BstKTI	GATC	9 cut(s)	30, 37, 721, 817, 1054, 1164, 1318, 1366, 1407
BstMAI	GTCTC	3 cut(s)	407, 833, 918
BstMBI	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
BstMWI	GCNNNNNNNGC	7 cut(s)	16, 148, 296, 352, 447, 487, 1538
BstNI	CCWGG	5 cut(s)	245, 348, 566, 579, 723
BstNSI	RCATGY	3 cut(s)	1204, 1428, 1555
BstSCI	CCNGG	7 cut(s)	176, 243, 346, 564, 577, 721, 988
BstUI	CGCG	2 cut(s)	79, 149
BstV1I	GCAGC	4 cut(s)	379, 754, 1002, 1324
BstX2I	RGATCY	1 cut(s)	718
BstYI	RGATCY	1 cut(s)	718
Bsu15I	ATCGAT	1 cut(s)	360
BsuRI	GGCC	6 cut(s)	181, 290, 346, 507, 1005, 1192
BsuTUI	ATCGAT	1 cut(s)	360
BtrI	CACGTC	1 cut(s)	417
BtsCI	GGATG	4 cut(s)	432, 688, 1090, 1458
BtsIMutI	CAGTG	1 cut(s)	939
Cac8I	GCNNGC	4 cut(s)	21, 452, 505, 1534
CciI	TCATGA	1 cut(s)	811
CfoI	GCGC	4 cut(s)	81, 151, 203, 526
Cfr13I	GGNCC	3 cut(s)	180, 344, 350
ClaI	ATCGAT	1 cut(s)	360
CseI	GACGC	4 cut(s)	59, 85, 900, 1329
Csp6I	GTAC	3 cut(s)	106, 571, 1029
CspCI	CAANNNNNGTGG	2 cut(s)	1187, 1222
CviQI	GTAC	3 cut(s)	106, 571, 1029
DdeI	CTNAG	7 cut(s)	336, 446, 752, 832, 1217, 1466, 1537
DinI	GGCGCC	1 cut(s)	202
DpnI	GATC	9 cut(s)	29, 36, 720, 816, 1053, 1163, 1317, 1365, 1406
DpnII	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
DraI	TTTAAA	1 cut(s)	1558
EaeI	YGGCCR	1 cut(s)	1003
Eam1104I	CTCTTC	1 cut(s)	741
EarI	CTCTTC	1 cut(s)	741
Ecl136II	GAGCTC	1 cut(s)	751
Eco24I	GRGCYC	1 cut(s)	753
Eco31I	GGTCTC	2 cut(s)	833, 918
Eco32I	GATATC	1 cut(s)	1214
Eco47I	GGWCC	1 cut(s)	350
Eco53kI	GAGCTC	1 cut(s)	751
Eco57I	CTGAAG	2 cut(s)	440, 963
EcoICRI	GAGCTC	1 cut(s)	751
EcoRII	CCWGG	5 cut(s)	243, 346, 564, 577, 721
EcoRV	GATATC	1 cut(s)	1214
EcoT22I	ATGCAT	2 cut(s)	12, 1173
EcoT38I	GRGCYC	1 cut(s)	753
EgeI	GGCGCC	1 cut(s)	202
EheI	GGCGCC	1 cut(s)	202
Esp3I	CGTCTC	1 cut(s)	407
FaqI	GGGAC	2 cut(s)	149, 1005
FauNDI	CATATG	1 cut(s)	1008
FbaI	TGATCA	2 cut(s)	814, 1051
FblI	GTMKAC	1 cut(s)	1429
Fnu4HI	GCNGC	5 cut(s)	54, 393, 768, 1016, 1338
FokI	GGATG	4 cut(s)	439, 695, 1097, 1465
FriOI	GRGCYC	1 cut(s)	753
Fsp4HI	GCNGC	5 cut(s)	54, 393, 768, 1016, 1338
FspBI	CTAG	3 cut(s)	164, 1370, 1533
FspI	TGCGCA	1 cut(s)	525
GlaI	GCGC	4 cut(s)	80, 150, 202, 525
GluI	GCNGC	5 cut(s)	54, 393, 768, 1016, 1338
GsaI	CCCAGC	1 cut(s)	1378
GsuI	CTGGAG	1 cut(s)	321
HaeII	RGCGCY	1 cut(s)	204
HaeIII	GGCC	6 cut(s)	181, 290, 346, 507, 1005, 1192
HapII	CCGG	3 cut(s)	178, 989, 1095
HgaI	GACGC	4 cut(s)	59, 85, 900, 1329
HhaI	GCGC	4 cut(s)	81, 151, 203, 526
Hin1I	GRCGYC	2 cut(s)	51, 201
Hin6I	GCGC	4 cut(s)	79, 149, 201, 524
HinP1I	GCGC	4 cut(s)	79, 149, 201, 524
HincII	GTYRAC	3 cut(s)	231, 972, 1183
HindII	GTYRAC	3 cut(s)	231, 972, 1183
HinfI	GANTC	7 cut(s)	110, 122, 206, 248, 362, 544, 1222
HpaI	GTTAAC	1 cut(s)	1183
HpaII	CCGG	3 cut(s)	178, 989, 1095
HphI	GGTGA	3 cut(s)	29, 797, 1061
Hpy166II	GTNNAC	6 cut(s)	196, 231, 823, 972, 1183, 1430
Hpy188I	TCNGA	5 cut(s)	127, 264, 666, 755, 1419
Hpy8I	GTNNAC	6 cut(s)	196, 231, 823, 972, 1183, 1430
Hpy99I	CGWCG	5 cut(s)	53, 98, 101, 122, 894
HpyAV	CCTTC	2 cut(s)	124, 170
HpyCH4III	ACNGT	2 cut(s)	827, 1475
HpyCH4IV	ACGT	2 cut(s)	416, 844
HpyCH4V	TGCA	8 cut(s)	10, 849, 929, 954, 977, 1171, 1295, 1435
HpyF10VI	GCNNNNNNNGC	7 cut(s)	16, 148, 296, 352, 447, 487, 1538
HpyF3I	CTNAG	7 cut(s)	336, 446, 752, 832, 1217, 1466, 1537
HpySE526I	ACGT	2 cut(s)	416, 844
Hsp92I	GRCGYC	2 cut(s)	51, 201
HspAI	GCGC	4 cut(s)	79, 149, 201, 524
KasI	GGCGCC	1 cut(s)	200
Ksp22I	TGATCA	2 cut(s)	814, 1051
KspAI	GTTAAC	1 cut(s)	1183
Kzo9I	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
LguI	GCTCTTC	1 cut(s)	741
LmnI	GCTCC	2 cut(s)	271, 1268
Lsp1109I	GCAGC	4 cut(s)	379, 754, 1002, 1324
LweI	GCATC	3 cut(s)	19, 286, 694
MaeI	CTAG	3 cut(s)	164, 1370, 1533
MaeII	ACGT	2 cut(s)	416, 844
MaeIII	GTNAC	3 cut(s)	796, 1087, 1469
MalI	GATC	9 cut(s)	29, 36, 720, 816, 1053, 1163, 1317, 1365, 1406
MbiI	CCGCTC	1 cut(s)	254
MboI	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
MboII	GAAGA	5 cut(s)	553, 758, 956, 1432, 1505
MflI	RGATCY	1 cut(s)	718
MhlI	GDGCHC	1 cut(s)	753
MlsI	TGGCCA	1 cut(s)	1005
MluNI	TGGCCA	1 cut(s)	1005
Mly113I	GGCGCC	1 cut(s)	201
MlyI	GAGTC	1 cut(s)	215
MmeI	TCCRAC	1 cut(s)	150
Mox20I	TGGCCA	1 cut(s)	1005
Mph1103I	ATGCAT	2 cut(s)	12, 1173
MscI	TGGCCA	1 cut(s)	1005
MseI	TTAA	5 cut(s)	155, 285, 785, 1182, 1557
MslI	CAYNNNNRTG	3 cut(s)	810, 816, 999
Msp20I	TGGCCA	1 cut(s)	1005
MspA1I	CMGCKG	2 cut(s)	967, 1541
MspI	CCGG	3 cut(s)	178, 989, 1095
MspR9I	CCNGG	7 cut(s)	178, 245, 348, 566, 579, 723, 990
Mva1269I	GAATGC	1 cut(s)	56
MvaI	CCWGG	5 cut(s)	245, 348, 566, 579, 723
MvnI	CGCG	2 cut(s)	79, 149
MwoI	GCNNNNNNNGC	7 cut(s)	16, 148, 296, 352, 447, 487, 1538
NarI	GGCGCC	1 cut(s)	201
NciI	CCSGG	2 cut(s)	178, 990
NdeI	CATATG	1 cut(s)	1008
NdeII	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
NheI	GCTAGC	1 cut(s)	1532
NlaIV	GGNNCC	3 cut(s)	202, 720, 1332
NmeAIII	GCCGAG	2 cut(s)	229, 897
NsbI	TGCGCA	1 cut(s)	525
NsiI	ATGCAT	2 cut(s)	12, 1173
NspI	RCATGY	3 cut(s)	1204, 1428, 1555
PagI	TCATGA	1 cut(s)	811
PciI	ACATGT	2 cut(s)	1424, 1551
PciSI	GCTCTTC	1 cut(s)	741
PcsI	WCGNNNNNNNCGW	4 cut(s)	105, 114, 123, 1479
PctI	GAATGC	1 cut(s)	56
PfeI	GAWTC	6 cut(s)	110, 122, 248, 362, 544, 1222
PfoI	TCCNGGA	1 cut(s)	988
PkrI	GCNGC	5 cut(s)	55, 394, 769, 1017, 1339
PleI	GAGTC	1 cut(s)	214
PluTI	GGCGCC	1 cut(s)	204
PpsI	GAGTC	1 cut(s)	214
PscI	ACATGT	2 cut(s)	1424, 1551
PshBI	ATTAAT	1 cut(s)	785
Psp124BI	GAGCTC	1 cut(s)	753
Psp1406I	AACGTT	1 cut(s)	844
Psp6I	CCWGG	5 cut(s)	243, 346, 564, 577, 721
PspFI	CCCAGC	1 cut(s)	1374
PspGI	CCWGG	5 cut(s)	243, 346, 564, 577, 721
PspN4I	GGNNCC	3 cut(s)	202, 720, 1332
PspPI	GGNCC	3 cut(s)	180, 344, 350
PsuI	RGATCY	1 cut(s)	718
PvuII	CAGCTG	1 cut(s)	1541
RsaI	GTAC	3 cut(s)	107, 572, 1030
RsaNI	GTAC	3 cut(s)	106, 571, 1029
RseI	CAYNNNNRTG	3 cut(s)	810, 816, 999
SacI	GAGCTC	1 cut(s)	753
SapI	GCTCTTC	1 cut(s)	741
SaqAI	TTAA	5 cut(s)	155, 285, 785, 1182, 1557
SatI	GCNGC	5 cut(s)	54, 393, 768, 1016, 1338
Sau3AI	GATC	9 cut(s)	27, 34, 718, 814, 1051, 1161, 1315, 1363, 1404
Sau96I	GGNCC	3 cut(s)	180, 344, 350
ScaI	AGTACT	1 cut(s)	1030
SchI	GAGTC	1 cut(s)	215
ScrFI	CCNGG	7 cut(s)	178, 245, 348, 566, 579, 723, 990
SduI	GDGCHC	1 cut(s)	753
SfaNI	GCATC	3 cut(s)	19, 286, 694
SfoI	GGCGCC	1 cut(s)	202
SinI	GGWCC	1 cut(s)	350
SmiMI	CAYNNNNRTG	3 cut(s)	810, 816, 999
SsiI	CCGC	5 cut(s)	54, 147, 252, 353, 967
SspDI	GGCGCC	1 cut(s)	200
SspMI	CTAG	3 cut(s)	164, 1370, 1533
SstI	GAGCTC	1 cut(s)	753
StyD4I	CCNGG	7 cut(s)	176, 243, 346, 564, 577, 721, 988
TaaI	ACNGT	2 cut(s)	827, 1475
TaiI	ACGT	2 cut(s)	419, 847
TaqI	TCGA	9 cut(s)	33, 93, 120, 360, 400, 435, 676, 1403, 1447
TatI	WGTACW	1 cut(s)	1028
TauI	GCSGC	1 cut(s)	56
TfiI	GAWTC	6 cut(s)	110, 122, 248, 362, 544, 1222
Tru1I	TTAA	5 cut(s)	155, 285, 785, 1182, 1557
Tru9I	TTAA	5 cut(s)	155, 285, 785, 1182, 1557
TscAI	CASTG	1 cut(s)	946
TseI	GCWGC	4 cut(s)	392, 767, 1015, 1337
TspDTI	ATGAA	4 cut(s)	759, 891, 1010, 1346
TspGWI	ACGGA	1 cut(s)	537
TspRI	CASTG	1 cut(s)	946
VpaK11BI	GGWCC	1 cut(s)	350
VspI	ATTAAT	1 cut(s)	785
XapI	RAATTY	6 cut(s)	89, 236, 403, 737, 948, 1133
XbaI	TCTAGA	1 cut(s)	163
XceI	RCATGY	3 cut(s)	1204, 1428, 1555
XcmI	CCANNNNNNNNNTGG	2 cut(s)	241, 1205
XmiI	GTMKAC	1 cut(s)	1429
XspI	CTAG	3 cut(s)	164, 1370, 1533
ZrmI	AGTACT	1 cut(s)	1030
Zsp2I	ATGCAT	2 cut(s)	12, 1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.