Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002985

Physical Location & Seq

Genomic Coordinates Reverse (-)

2813271 .. 2817918

Gene Structure 4648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1039700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCAGCGCACCAAAAGCTCGCTGTGATTCTCGAGAATCCTCAAAACGACGCCGAATTCCTCCTCGTGAAACAGACGCGACCGCCGAAGTTCGACGACGAAGAGTACGACTCGTTCGTCGATTCCGATCTCTGGGACTTGCCCGCCTCCCAATTGAACCTTCTAGAAGGACAATCGAAGCCCTCGATTGCAGTGGCAGGCGCAGAATCGTTGTCGGGGAAGATCGATTTGGAAAAATTCGATTTCGATTCTGCTCTCAACCAGGTTCTGGAACAAGTAGGGTTTAAGCCAGCTGACGGTGGAGATTGGAGGTTGTCCAAGTACGTGGAGGAAGGTCAGTTTGGACCCGGTCCGCCCATTAACTCGGTGTTCATTAGGGGAAAATTAGTAGCACCGGAGCAAAATTTACAAGAATCGTGTAGATGGATGTCTGTCCCGAGTTGTCTAAGCTGGCTTGTTGAAGTGAAACCAAGCAGTGATCGTGTGGGGCCGTTGATAGTTGCAGGTCTTCTAAATGAATCTGAGCAATTGAGAGAGATGAACATTCCATCCACCTTACCTTTCCAGGAGTACCCTCCTGGTGTTGTGCTTGTACCTATGGGAAGCAGGACAGCAAAACCTTTTTATACAACAAACCTGGTTGTTTTTGCACCCAAAAATGCTTCAAATGAATCTGGGAAGAATGATTTTATTGCTTGTGGAGATGCATTGATAGTGGATCCTGGGTGCCGGTCTGAATTCCATGAAGAGCTCGCACAAATTGTGACTTCATTGCCAAGAAAGTTAGTTGTCTTTGTTACGCATCACCATCAGGATCATGTGGATGGTCTTTCAGTTATTCAGCGTTGCAATCCTGATGCTACTTTATTAGCACATGAAAATACTGTGCGACGCATTGGAAAAGATGACTGGTCTCTTGGCTTCACTGCAATTTCTGGAACTGAAGAGATTTGCATTGGTGGTCAGCGATTGATTGCCGTCTTTTCTCCAGGGCATACAGATGGGCATATGGCACTGCTTCATGCCAGTACTCACACATTGATTGTCGGTGATCATTGCGTGGGTCAAGGTAGTGCTGTACTGGATGTTACTGCCGGGGGAAATATGACTGATTACTTTCAATCAACTTACAAATTCATGGAGCTTTCCCCACATGCCTTGGTCCCCATGCATGGGAGAGTTAACCTATGGCCAAAGCACTTGCTTTGTGGATATCTCAAGAACCGCAGAGCTAGAGAAAGTTCTGTCTTGAAAGCGATAGAAAATGGAGCAGAAACTTTGTTCGACATAGTTGCCACCGTATATTCGGAGGTTGATCGTAGATTTTGGATTCCTGCTGCATCTAATGTGAGGCTTCATGTGGATCATCTTGCCCAGCAAGATAAGTTACCAAAGGGATTCTCTTTAGAAACTTTCCATAGCAGTTTGGCTGAATTCTCTGCCAAGGAATTCTCGATTCAGAGGTTTCAAAAAACTTGTAGGCTGCACTTCTTCTCTCGATGGATTGGGGCATATTTAAGTAGTGTTGTCAGGTTAAATTGTTCGAAGCCAAGGAAATCTCAGGTTCTTGTTGCCGGGGCGGTGGCTAGCTTTGCTGTTGTGTTGTACATGTTTAAAAACAGGCTTAGTCCCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0031974 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B

Protein Analysis

546

Amino Acids

60.38

Weight (kDa)

6.18

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	234 - 391	1.9e-08	Metallo-beta-lactamase superfamily
WHD_BLACT	PF17778	426 - 462	1.8e-06	Beta-lactamase associated winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25375
fragaria_vesca	FvH4_4g26975 FvH4_4g26975 FvH4_4g26975 FvH4_4g26975
malus_domestica	MD13G1039000.v1.1 MD16G1039700.v1.1
prunus_persica	Prupe.1G314400_v2.0.a1 Prupe.1G314400_v2.0.a1
pyrus_communis	pycom16g03450
rosa_chinensis	RchiOBHm_Chr2g0108931 RchiOBHm_Chr4g0434781 RchiOBHm_Chr5g0042931 RchiOBHm_Chr6g0261541 RchiOBHm_Chr7g0243441
rosa_laevigata	RLG00000006650
rosa_multiflora	Rmu_sc0007829.1_g000001 Rmu_sc0017904.1_g000001 Rmu_sc0017904.1_g000002 Rmu_sc0026857.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312600 Rroxscaffold_5G00375980
rosa_rugosa	Rorug02G0079600 Rorug04G0278300 Rorug06G0479000
rosa_samantha	Rh2AG012800 Rh2BG218400 Rh2CG210400 Rh2DG354000 Rh2DG354100 Rh4AG334700 Rh4BG343300 Rh4CG357700 Rh4DG337000 Rh7BG078500
rosa_wichuraiana	Rw1G015910 Rw4G029190 Rw7G037630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc36I	ACCTGC	1 cut(s)	494
AccB1I	GGYRCC	1 cut(s)	726
AccB7I	CCANNNNNTGG	1 cut(s)	268
AccII	CGCG	1 cut(s)	79
AciI	CCGC	5 cut(s)	83, 144, 353, 1225, 1580
AclWI	GGATC	4 cut(s)	713, 726, 822, 1371
AcoI	YGGCCR	1 cut(s)	1190
AcsI	RAATTY	7 cut(s)	56, 236, 403, 737, 1133, 1433, 1448
AcuI	CTGAAG	1 cut(s)	963
AcyI	GRCGYC	1 cut(s)	51
AfaI	GTAC	7 cut(s)	107, 323, 572, 594, 1030, 1080, 1607
AfiI	CCNNNNNNNGG	5 cut(s)	132, 268, 296, 1172, 1173
AflIII	ACRYGT	1 cut(s)	1608
AgsI	TTSAA	6 cut(s)	157, 461, 666, 1121, 1252, 1469
AjnI	CCWGG	6 cut(s)	261, 564, 577, 636, 721, 988
AjuI	GAANNNNNNNTTGG	6 cut(s)	144, 176, 212, 244, 324, 356
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
AluBI	AGCT	7 cut(s)	19, 293, 450, 751, 1144, 1232, 1590
AluI	AGCT	7 cut(s)	19, 293, 450, 751, 1144, 1232, 1590
Alw21I	GWGCWC	1 cut(s)	753
Alw26I	GTCTC	1 cut(s)	918
AlwI	GGATC	4 cut(s)	713, 726, 822, 1371
AlwNI	CAGNNNCTG	1 cut(s)	268
Ama87I	CYCGRG	2 cut(s)	32, 436
AoxI	GGCC	2 cut(s)	488, 1190
ApeKI	GCWGC	3 cut(s)	5, 1337, 1483
ApoI	RAATTY	7 cut(s)	56, 236, 403, 737, 1133, 1433, 1448
AspLEI	GCGC	2 cut(s)	10, 203
AspS9I	GGNCC	4 cut(s)	344, 350, 488, 1162
AsuC2I	CCSGG	3 cut(s)	348, 1096, 1576
AsuHPI	GGTGA	2 cut(s)	797, 1061
AsuII	TTCGAA	1 cut(s)	1544
AsuNHI	GCTAGC	1 cut(s)	1586
AvaI	CYCGRG	2 cut(s)	32, 436
AvaII	GGWCC	3 cut(s)	344, 350, 1162
BalI	TGGCCA	1 cut(s)	1192
BamHI	GGATCC	1 cut(s)	718
BanI	GGYRCC	1 cut(s)	726
BanII	GRGCYC	1 cut(s)	753
BauI	CACGAG	1 cut(s)	65
BbsI	GAAGAC	1 cut(s)	500
Bbv12I	GWGCWC	1 cut(s)	753
BbvI	GCAGC	3 cut(s)	17, 1324, 1470
BccI	CCATC	6 cut(s)	417, 556, 816, 818, 995, 1494
BceAI	ACGGC	2 cut(s)	475, 962
BcgI	CGANNNNNNTGC	2 cut(s)	1274, 1308
BciT130I	CCWGG	6 cut(s)	263, 566, 579, 638, 723, 990
BclI	TGATCA	1 cut(s)	1051
BcnI	CCSGG	3 cut(s)	348, 1096, 1576
BcoDI	GTCTC	1 cut(s)	918
BfaI	CTAG	3 cut(s)	164, 1233, 1587
BfuAI	ACCTGC	1 cut(s)	494
BisI	GCNGC	3 cut(s)	6, 1338, 1484
BlsI	GCNGC	3 cut(s)	7, 1339, 1485
BmcAI	AGTACT	1 cut(s)	1030
Bme1390I	CCNGG	9 cut(s)	263, 348, 566, 579, 638, 723, 990, 1096, 1576
Bme18I	GGWCC	3 cut(s)	344, 350, 1162
BmeT110I	CYCGRG	2 cut(s)	32, 436
BmgT120I	GGNCC	4 cut(s)	344, 350, 488, 1162
BmiI	GGNNCC	5 cut(s)	346, 489, 720, 728, 1164
BmrFI	CCNGG	9 cut(s)	263, 348, 566, 579, 638, 723, 990, 1096, 1576
BmsI	GCATC	4 cut(s)	694, 811, 847, 1349
BmtI	GCTAGC	1 cut(s)	1590
BpiI	GAAGAC	1 cut(s)	500
BplI	GAGNNNNNCTC	2 cut(s)	95, 127
BpmI	CTGGAG	1 cut(s)	972
Bpu14I	TTCGAA	1 cut(s)	1544
BpuEI	CTTGAG	1 cut(s)	1202
BpuMI	CCSGG	3 cut(s)	348, 1096, 1576
Bsa29I	ATCGAT	1 cut(s)	225
BsaAI	YACGTR	1 cut(s)	325
BsaBI	GATNNNNATC	1 cut(s)	126
BsaHI	GRCGYC	1 cut(s)	51
BsaI	GGTCTC	1 cut(s)	918
BsaJI	CCNNGG	7 cut(s)	722, 989, 1095, 1158, 1443, 1550, 1575
BsaWI	WCCGGW	1 cut(s)	394
Bsc4I	CCNNNNNNNGG	5 cut(s)	132, 268, 296, 1172, 1173
Bse118I	RCCGGY	1 cut(s)	729
Bse1I	ACTGG	3 cut(s)	914, 1026, 1086
Bse3DI	GCAATG	2 cut(s)	770, 1054
Bse8I	GATNNNNATC	1 cut(s)	126
BseBI	CCWGG	6 cut(s)	263, 566, 579, 638, 723, 990
BseCI	ATCGAT	1 cut(s)	225
BseDI	CCNNGG	7 cut(s)	722, 989, 1095, 1158, 1443, 1550, 1575
BseGI	GGATG	4 cut(s)	432, 548, 829, 1090
BseJI	GATNNNNATC	1 cut(s)	126
BseLI	CCNNNNNNNGG	5 cut(s)	132, 268, 296, 1172, 1173
BseMI	GCAATG	2 cut(s)	770, 1054
BseMII	CTCAG	2 cut(s)	513, 1574
BseNI	ACTGG	3 cut(s)	914, 1026, 1086
BseRI	GAGGAG	1 cut(s)	53
BseXI	GCAGC	3 cut(s)	17, 1324, 1470
BseYI	CCCAGC	1 cut(s)	1374
BsgI	GTGCAG	1 cut(s)	1469
Bsh1236I	CGCG	1 cut(s)	79
Bsh1285I	CGRYCG	1 cut(s)	83
BshFI	GGCC	2 cut(s)	490, 1192
BshNI	GGYRCC	1 cut(s)	726
BshVI	ATCGAT	1 cut(s)	225
BsiEI	CGRYCG	1 cut(s)	83
BsiHKAI	GWGCWC	1 cut(s)	753
BsiHKCI	CYCGRG	2 cut(s)	32, 436
BsiSI	CCGG	5 cut(s)	348, 395, 730, 1095, 1575
BslFI	GGGAC	4 cut(s)	149, 419, 1148, 1614
BslI	CCNNNNNNNGG	5 cut(s)	132, 268, 296, 1172, 1173
BsmAI	GTCTC	1 cut(s)	918
BsmFI	GGGAC	4 cut(s)	149, 419, 1148, 1614
BsnI	GGCC	2 cut(s)	490, 1192
Bso31I	GGTCTC	1 cut(s)	918
BsoBI	CYCGRG	2 cut(s)	32, 436
Bsp119I	TTCGAA	1 cut(s)	1544
Bsp1286I	GDGCHC	1 cut(s)	753
Bsp1407I	TGTACA	1 cut(s)	1605
Bsp143I	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
BspACI	CCGC	5 cut(s)	83, 144, 353, 1225, 1580
BspANI	GGCC	2 cut(s)	490, 1192
BspCNI	CTCAG	2 cut(s)	514, 1573
BspDI	ATCGAT	1 cut(s)	225
BspFNI	CGCG	1 cut(s)	79
BspLI	GGNNCC	5 cut(s)	346, 489, 720, 728, 1164
BspMI	ACCTGC	1 cut(s)	494
BspOI	GCTAGC	1 cut(s)	1590
BspPI	GGATC	4 cut(s)	713, 726, 822, 1371
BspQI	GCTCTTC	1 cut(s)	741
BspT104I	TTCGAA	1 cut(s)	1544
BspT107I	GGYRCC	1 cut(s)	726
BspTNI	GGTCTC	1 cut(s)	918
BsrDI	GCAATG	2 cut(s)	770, 1054
BsrFI	RCCGGY	1 cut(s)	729
BsrGI	TGTACA	1 cut(s)	1605
BsrI	ACTGG	3 cut(s)	914, 1026, 1086
BssAI	RCCGGY	1 cut(s)	729
BssECI	CCNNGG	7 cut(s)	722, 989, 1095, 1158, 1443, 1550, 1575
BssMI	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
BssNI	GRCGYC	1 cut(s)	51
BssSI	CACGAG	1 cut(s)	65
BssT1I	CCWWGG	3 cut(s)	1158, 1443, 1550
Bst2BI	CACGAG	1 cut(s)	65
Bst2UI	CCWGG	6 cut(s)	263, 566, 579, 638, 723, 990
Bst4CI	ACNGT	3 cut(s)	299, 886, 1300
Bst6I	CTCTTC	3 cut(s)	96, 741, 939
BstACI	GRCGYC	1 cut(s)	51
BstAUI	TGTACA	1 cut(s)	1605
BstBAI	YACGTR	1 cut(s)	325
BstBI	TTCGAA	1 cut(s)	1544
BstC8I	GCNNGC	7 cut(s)	21, 144, 199, 291, 452, 753, 1588
BstDEI	CTNAG	4 cut(s)	446, 522, 1560, 1625
BstF5I	GGATG	4 cut(s)	432, 548, 829, 1090
BstFNI	CGCG	1 cut(s)	79
BstHHI	GCGC	2 cut(s)	10, 203
BstKTI	GATC	8 cut(s)	130, 225, 481, 721, 817, 1054, 1318, 1366
BstMAI	GTCTC	1 cut(s)	918
BstMBI	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
BstMCI	CGRYCG	1 cut(s)	83
BstMWI	GCNNNNNNNGC	2 cut(s)	16, 1592
BstNI	CCWGG	6 cut(s)	263, 566, 579, 638, 723, 990
BstNSI	RCATGY	2 cut(s)	1157, 1612
BstSCI	CCNGG	9 cut(s)	261, 346, 564, 577, 636, 721, 988, 1094, 1574
BstUI	CGCG	1 cut(s)	79
BstV1I	GCAGC	3 cut(s)	17, 1324, 1470
BstV2I	GAAGAC	1 cut(s)	500
BstX2I	RGATCY	1 cut(s)	718
BstXI	CCANNNNNNTGG	1 cut(s)	325
BstYI	RGATCY	1 cut(s)	718
Bsu15I	ATCGAT	1 cut(s)	225
BsuRI	GGCC	2 cut(s)	490, 1192
BsuTUI	ATCGAT	1 cut(s)	225
BtsCI	GGATG	4 cut(s)	432, 548, 829, 1090
BtsI	GCAGTG	4 cut(s)	198, 481, 924, 1013
BtsIMutI	CAGTG	4 cut(s)	198, 481, 924, 1013
BveI	ACCTGC	1 cut(s)	494
Cac8I	GCNNGC	7 cut(s)	21, 144, 199, 291, 452, 753, 1588
CaiI	CAGNNNCTG	1 cut(s)	268
CfoI	GCGC	2 cut(s)	10, 203
Cfr10I	RCCGGY	1 cut(s)	729
Cfr13I	GGNCC	4 cut(s)	344, 350, 488, 1162
ClaI	ATCGAT	1 cut(s)	225
CpoI	CGGWCCG	1 cut(s)	350
CseI	GACGC	3 cut(s)	59, 85, 900
CsiI	ACCWGGT	2 cut(s)	261, 636
Csp6I	GTAC	7 cut(s)	106, 322, 571, 593, 1029, 1079, 1606
CspCI	CAANNNNNGTGG	2 cut(s)	1140, 1175
CspI	CGGWCCG	1 cut(s)	350
CviQI	GTAC	7 cut(s)	106, 322, 571, 593, 1029, 1079, 1606
DdeI	CTNAG	4 cut(s)	446, 522, 1560, 1625
DpnI	GATC	8 cut(s)	129, 224, 480, 720, 816, 1053, 1317, 1365
DpnII	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
DraI	TTTAAA	1 cut(s)	1615
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	1190
Eam1104I	CTCTTC	3 cut(s)	96, 741, 939
EarI	CTCTTC	3 cut(s)	96, 741, 939
EciI	GGCGGA	1 cut(s)	342
Ecl136II	GAGCTC	1 cut(s)	751
Eco130I	CCWWGG	3 cut(s)	1158, 1443, 1550
Eco24I	GRGCYC	1 cut(s)	753
Eco31I	GGTCTC	1 cut(s)	918
Eco32I	GATATC	1 cut(s)	1214
Eco47I	GGWCC	3 cut(s)	344, 350, 1162
Eco53kI	GAGCTC	1 cut(s)	751
Eco57I	CTGAAG	1 cut(s)	963
Eco88I	CYCGRG	2 cut(s)	32, 436
EcoICRI	GAGCTC	1 cut(s)	751
EcoRI	GAATTC	4 cut(s)	56, 737, 1433, 1448
EcoRII	CCWGG	6 cut(s)	261, 564, 577, 636, 721, 988
EcoRV	GATATC	1 cut(s)	1214
EcoT14I	CCWWGG	3 cut(s)	1158, 1443, 1550
EcoT22I	ATGCAT	2 cut(s)	709, 1173
EcoT38I	GRGCYC	1 cut(s)	753
ErhI	CCWWGG	3 cut(s)	1158, 1443, 1550
FaqI	GGGAC	4 cut(s)	149, 419, 1148, 1614
FauI	CCCGC	1 cut(s)	151
FauNDI	CATATG	1 cut(s)	1008
FbaI	TGATCA	1 cut(s)	1051
Fnu4HI	GCNGC	3 cut(s)	6, 1338, 1484
FokI	GGATG	4 cut(s)	439, 535, 836, 1097
FriOI	GRGCYC	1 cut(s)	753
Fsp4HI	GCNGC	3 cut(s)	6, 1338, 1484
FspBI	CTAG	3 cut(s)	164, 1233, 1587
GlaI	GCGC	2 cut(s)	9, 202
GluI	GCNGC	3 cut(s)	6, 1338, 1484
GsaI	CCCAGC	1 cut(s)	1378
GsuI	CTGGAG	1 cut(s)	972
HaeIII	GGCC	2 cut(s)	490, 1192
HapII	CCGG	5 cut(s)	348, 395, 730, 1095, 1575
HgaI	GACGC	3 cut(s)	59, 85, 900
HhaI	GCGC	2 cut(s)	10, 203
Hin1I	GRCGYC	1 cut(s)	51
Hin6I	GCGC	2 cut(s)	8, 201
HinP1I	GCGC	2 cut(s)	8, 201
HincII	GTYRAC	1 cut(s)	1183
HindII	GTYRAC	1 cut(s)	1183
HpaI	GTTAAC	1 cut(s)	1183
HpaII	CCGG	5 cut(s)	348, 395, 730, 1095, 1575
HphI	GGTGA	2 cut(s)	797, 1061
Hpy166II	GTNNAC	1 cut(s)	1183
Hpy188I	TCNGA	5 cut(s)	127, 523, 736, 1309, 1461
Hpy8I	GTNNAC	1 cut(s)	1183
Hpy99I	CGWCG	5 cut(s)	53, 98, 101, 122, 894
HpyAV	CCTTC	3 cut(s)	161, 170, 326
HpyCH4III	ACNGT	3 cut(s)	299, 886, 1300
HpyCH4IV	ACGT	1 cut(s)	324
HpyF10VI	GCNNNNNNNGC	2 cut(s)	16, 1592
HpyF3I	CTNAG	4 cut(s)	446, 522, 1560, 1625
HpySE526I	ACGT	1 cut(s)	324
Hsp92I	GRCGYC	1 cut(s)	51
HspAI	GCGC	2 cut(s)	8, 201
Ksp22I	TGATCA	1 cut(s)	1051
KspAI	GTTAAC	1 cut(s)	1183
Kzo9I	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
LguI	GCTCTTC	1 cut(s)	741
LmnI	GCTCC	3 cut(s)	397, 1141, 1268
Lsp1109I	GCAGC	3 cut(s)	17, 1324, 1470
LweI	GCATC	4 cut(s)	694, 811, 847, 1349
MabI	ACCWGGT	2 cut(s)	261, 636
MaeI	CTAG	3 cut(s)	164, 1233, 1587
MaeII	ACGT	1 cut(s)	324
MaeIII	GTNAC	4 cut(s)	763, 796, 1087, 1386
MalI	GATC	8 cut(s)	129, 224, 480, 720, 816, 1053, 1317, 1365
MboI	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
MboII	GAAGA	7 cut(s)	113, 232, 500, 691, 758, 956, 1483
MfeI	CAATTG	2 cut(s)	152, 527
MflI	RGATCY	1 cut(s)	718
MhlI	GDGCHC	1 cut(s)	753
MlsI	TGGCCA	1 cut(s)	1192
MluNI	TGGCCA	1 cut(s)	1192
MlyI	GAGTC	1 cut(s)	104
Mox20I	TGGCCA	1 cut(s)	1192
Mph1103I	ATGCAT	2 cut(s)	709, 1173
MscI	TGGCCA	1 cut(s)	1192
MseI	TTAA	6 cut(s)	285, 360, 1182, 1517, 1535, 1614
MslI	CAYNNNNRTG	2 cut(s)	822, 999
Msp20I	TGGCCA	1 cut(s)	1192
MspA1I	CMGCKG	1 cut(s)	293
MspI	CCGG	5 cut(s)	348, 395, 730, 1095, 1575
MspR9I	CCNGG	9 cut(s)	263, 348, 566, 579, 638, 723, 990, 1096, 1576
MunI	CAATTG	2 cut(s)	152, 527
MvaI	CCWGG	6 cut(s)	263, 566, 579, 638, 723, 990
MvnI	CGCG	1 cut(s)	79
MwoI	GCNNNNNNNGC	2 cut(s)	16, 1592
NciI	CCSGG	3 cut(s)	348, 1096, 1576
NdeI	CATATG	1 cut(s)	1008
NdeII	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
NheI	GCTAGC	1 cut(s)	1586
NlaIV	GGNNCC	5 cut(s)	346, 489, 720, 728, 1164
NmuCI	GTSAC	1 cut(s)	763
NsiI	ATGCAT	2 cut(s)	709, 1173
NspI	RCATGY	2 cut(s)	1157, 1612
NspV	TTCGAA	1 cut(s)	1544
PaeR7I	CTCGAG	1 cut(s)	32
PciI	ACATGT	1 cut(s)	1608
PciSI	GCTCTTC	1 cut(s)	741
PcsI	WCGNNNNNNNCGW	5 cut(s)	83, 105, 114, 123, 182
PflFI	GACNNNGTC	1 cut(s)	348
PflMI	CCANNNNNTGG	1 cut(s)	268
PfoI	TCCNGGA	1 cut(s)	564
PkrI	GCNGC	3 cut(s)	7, 1339, 1485
PleI	GAGTC	1 cut(s)	104
PpsI	GAGTC	1 cut(s)	104
Ppu21I	YACGTR	1 cut(s)	325
PscI	ACATGT	1 cut(s)	1608
Psp124BI	GAGCTC	1 cut(s)	753
Psp6I	CCWGG	6 cut(s)	261, 564, 577, 636, 721, 988
PspFI	CCCAGC	1 cut(s)	1374
PspGI	CCWGG	6 cut(s)	261, 564, 577, 636, 721, 988
PspN4I	GGNNCC	5 cut(s)	346, 489, 720, 728, 1164
PspPI	GGNCC	4 cut(s)	344, 350, 488, 1162
PsrI	GAACNNNNNNTAC	2 cut(s)	98, 130
PstNI	CAGNNNCTG	1 cut(s)	268
PsuI	RGATCY	1 cut(s)	718
PsyI	GACNNNGTC	1 cut(s)	348
PvuII	CAGCTG	1 cut(s)	293
RsaI	GTAC	7 cut(s)	107, 323, 572, 594, 1030, 1080, 1607
RsaNI	GTAC	7 cut(s)	106, 322, 571, 593, 1029, 1079, 1606
RseI	CAYNNNNRTG	2 cut(s)	822, 999
Rsr2I	CGGWCCG	1 cut(s)	350
RsrII	CGGWCCG	1 cut(s)	350
SacI	GAGCTC	1 cut(s)	753
SapI	GCTCTTC	1 cut(s)	741
SaqAI	TTAA	6 cut(s)	285, 360, 1182, 1517, 1535, 1614
SatI	GCNGC	3 cut(s)	6, 1338, 1484
Sau3AI	GATC	8 cut(s)	127, 222, 478, 718, 814, 1051, 1315, 1363
Sau96I	GGNCC	4 cut(s)	344, 350, 488, 1162
ScaI	AGTACT	1 cut(s)	1030
SchI	GAGTC	1 cut(s)	104
ScrFI	CCNGG	9 cut(s)	263, 348, 566, 579, 638, 723, 990, 1096, 1576
SduI	GDGCHC	1 cut(s)	753
SexAI	ACCWGGT	2 cut(s)	261, 636
SfaNI	GCATC	4 cut(s)	694, 811, 847, 1349
Sfr274I	CTCGAG	1 cut(s)	32
SfuI	TTCGAA	1 cut(s)	1544
SinI	GGWCC	3 cut(s)	344, 350, 1162
SlaI	CTCGAG	1 cut(s)	32
SmiMI	CAYNNNNRTG	2 cut(s)	822, 999
SmlI	CTYRAG	2 cut(s)	32, 1217
SmoI	CTYRAG	2 cut(s)	32, 1217
SsiI	CCGC	5 cut(s)	83, 144, 353, 1225, 1580
SspMI	CTAG	3 cut(s)	164, 1233, 1587
SstI	GAGCTC	1 cut(s)	753
StyD4I	CCNGG	9 cut(s)	261, 346, 564, 577, 636, 721, 988, 1094, 1574
StyI	CCWWGG	3 cut(s)	1158, 1443, 1550
TaaI	ACNGT	3 cut(s)	299, 886, 1300
TaiI	ACGT	1 cut(s)	327
TatI	WGTACW	3 cut(s)	1028, 1078, 1605
Tru1I	TTAA	6 cut(s)	285, 360, 1182, 1517, 1535, 1614
Tru9I	TTAA	6 cut(s)	285, 360, 1182, 1517, 1535, 1614
TscAI	CASTG	4 cut(s)	198, 481, 931, 1020
TseFI	GTSAC	1 cut(s)	763
TseI	GCWGC	3 cut(s)	5, 1337, 1483
Tsp45I	GTSAC	1 cut(s)	763
TspRI	CASTG	4 cut(s)	198, 481, 931, 1020
Tth111I	GACNNNGTC	1 cut(s)	348
Van91I	CCANNNNNTGG	1 cut(s)	268
VpaK11BI	GGWCC	3 cut(s)	344, 350, 1162
XapI	RAATTY	7 cut(s)	56, 236, 403, 737, 1133, 1433, 1448
XbaI	TCTAGA	1 cut(s)	163
XceI	RCATGY	2 cut(s)	1157, 1612
XhoI	CTCGAG	1 cut(s)	32
XspI	CTAG	3 cut(s)	164, 1233, 1587
ZrmI	AGTACT	1 cut(s)	1030
Zsp2I	ATGCAT	2 cut(s)	709, 1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.