Rh7BG078500
ERF Family

Metallo-beta-lactamase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
5609258 .. 5626920
17663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG078500.1

Sequence Viewer

Length: 1350 bp
ATGTTGAAGAAGAGCGGTGCCGGCGCCGACGCGGAGATTGCTTGGCTTCTCTGCTACTTGGTGGTGGAGCAAGTCGGGTTCTGGTCGGGAAGGACCGGAAGACGCGAGATGAAATGCTGTGGATTGATGATAATGGTTGGAATTGCAGAGGTTTACTGTGCCAGGTTTCTGATTTTGAATTGTGATATTTTTTGCTTTGCAAGTTCTCTTAGGTTGTACCCAAAACTAGACTCCATTTTGTCTCAAGTGCTGAATGATAAAGAAAAGAAGAGGAAATTAGGGAGTAGCTTAAGTCAGTCATCTTCCATCCAGGATAACTGGAGGGGAATTCCTACTAAATTGAATAGCATCCCACACTCTAGAGACATCAGGAACTATTTTTATGATGATGTACTGCAAGCCACCAAAAGATCTATAAATGATGGAGGAATTCGATTAAAGGTGGAAATTAATATTCCAGAGCTGAACCCAGAAATGGATGTTTATCGAATAGGTACCTTAATGGAACTTGTTCGAACTCTAGCTCTTTCATTTGCTGATGATGGGAAATCTGTCAAGGCAATAGAGTTGTTGCTCCATGGCAGGCAACATGATCTCATCAAGCTTGGCACTCAAAAGGGTGGGATATGCAAAAAATATGGGATCAACAAGGTTTCATTTCTCCTTTTGGAACAAGTACGGTTTAAGGCAGCTGATGCCGGAGACTGGAAGCTGTGGAAGTATGTGGACGAAGCTCAGTTTGGGCCTGGGCCGCCCATCAATTCGGTGTTTGTTAGGGAAAAATTAGTGAATGCAGATCAAAATTTACAAGAGACGTGTAAGTGGATGTCGGTCGAAAGCTGTCTAAGCTGGCTTCAGGAAGTGAAACCAAGATGTGAGCGTGTGGGGCCTTTGATAGTTGCTGGGCTTCCAAATGAATTTGCACAAACAAGAGAGTTGCAGATCCCATCGACCTTACCTTACCAGGAGTACCCTCCTGGTGTTGTGCTTGTACCTATGGCAAGCAGGACAGGAAAACCTTTTCGTACAACAAACCTGGTTGTTTTTGCACCTAAAAATGTTCCAAATGATTCTGAAAAGAATGGTTTTATCGCGTGTGGAGATGCGTTGATAGTGGATCTTGGGTGTCAGTCTAAATTCCATGAAGAGGCTTTGGATAAATCGAAGTATATGAATGTCCTTCGAGCAGTAAGGAAGCACATTCAGAAGCTGAAACTGGACCTTGAGTTGCTTAAAGCACATGCTAAAAGAAAAGTTGAATTTAGTTCTGATGCTATTGAAGAAACTTCAGAAGATAATGAGAGTGTAGAGTCTGGGAGCTCCTCAAACTTCAAGCTCCTCAGACTCTAA

Protein Analysis

449

Amino Acids

50.49

Weight (kDa)

8.76

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 494
AccB1I GGYRCC 3 cut(s) 17, 23, 494
AccBSI CCGCTC 1 cut(s) 15
AccII CGCG 3 cut(s) 32, 105, 1094
AciI CCGC 3 cut(s) 15, 32, 752
AclWI GGATC 3 cut(s) 650, 937, 1125
AcsI RAATTY 6 cut(s) 327, 429, 802, 917, 1136, 1259
AcuI CTGAAG 2 cut(s) 839, 1272
AcyI GRCGYC 1 cut(s) 24
AfaI GTAC 7 cut(s) 218, 393, 496, 678, 971, 993, 1027
AfiI CCNNNNNNNGG 3 cut(s) 475, 705, 1147
AflII CTTAAG 1 cut(s) 289
AflIII ACRYGT 1 cut(s) 815
AgsI TTSAA 6 cut(s) 7, 178, 343, 1259, 1280, 1333
AjiI CACGTC 1 cut(s) 816
AjnI CCWGG 6 cut(s) 161, 309, 745, 963, 976, 1035
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
Alw21I GWGCWC 1 cut(s) 1322
Alw26I GTCTC 4 cut(s) 246, 357, 696, 806
AlwI GGATC 3 cut(s) 650, 937, 1125
AlwNI CAGNNNCTG 1 cut(s) 1210
AoxI GGCC 3 cut(s) 743, 749, 887
ApeKI GCWGC 1 cut(s) 689
ApoI RAATTY 6 cut(s) 327, 429, 802, 917, 1136, 1259
AseI ATTAAT 1 cut(s) 450
Asp700I GAANNNNTTC 1 cut(s) 510
Asp718I GGTACC 1 cut(s) 494
AspLEI GCGC 1 cut(s) 26
AspS9I GGNCC 5 cut(s) 93, 743, 749, 887, 1219
AsuII TTCGAA 1 cut(s) 514
AvaII GGWCC 2 cut(s) 93, 1219
BanI GGYRCC 3 cut(s) 17, 23, 494
BanII GRGCYC 1 cut(s) 1322
BbsI GAAGAC 1 cut(s) 106
Bbv12I GWGCWC 1 cut(s) 1322
BbvI GCAGC 1 cut(s) 701
BccI CCATC 5 cut(s) 314, 416, 536, 764, 955
BciT130I CCWGG 6 cut(s) 163, 311, 747, 965, 978, 1037
BcoDI GTCTC 4 cut(s) 246, 357, 696, 806
BfaI CTAG 3 cut(s) 227, 360, 521
BfoI RGCGCY 1 cut(s) 27
BfrI CTTAAG 1 cut(s) 289
BglII AGATCT 1 cut(s) 410
BisI GCNGC 2 cut(s) 690, 752
BlsI GCNGC 2 cut(s) 691, 753
Bme1390I CCNGG 6 cut(s) 163, 311, 747, 965, 978, 1037
Bme18I GGWCC 2 cut(s) 93, 1219
BmgBI CACGTC 1 cut(s) 816
BmgT120I GGNCC 5 cut(s) 93, 743, 749, 887, 1219
BmiI GGNNCC 4 cut(s) 19, 25, 496, 888
BmrFI CCNGG 6 cut(s) 163, 311, 747, 965, 978, 1037
BmsI GCATC 4 cut(s) 357, 685, 1093, 1261
BpiI GAAGAC 1 cut(s) 106
BpmI CTGGAG 1 cut(s) 340
Bpu14I TTCGAA 1 cut(s) 514
BpuEI CTTGAG 2 cut(s) 228, 1244
BsaBI GATNNNNATC 1 cut(s) 483
BsaHI GRCGYC 1 cut(s) 24
BsaJI CCNNGG 2 cut(s) 577, 746
BsaWI WCCGGW 1 cut(s) 95
Bsc4I CCNNNNNNNGG 3 cut(s) 475, 705, 1147
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 3 cut(s) 323, 710, 1221
Bse8I GATNNNNATC 1 cut(s) 483
BseBI CCWGG 6 cut(s) 163, 311, 747, 965, 978, 1037
BseDI CCNNGG 2 cut(s) 577, 746
BseGI GGATG 4 cut(s) 306, 348, 484, 831
BseJI GATNNNNATC 1 cut(s) 483
BseLI CCNNNNNNNGG 3 cut(s) 475, 705, 1147
BseMII CTCAG 1 cut(s) 749
BseNI ACTGG 3 cut(s) 323, 710, 1221
BseRI GAGGAG 2 cut(s) 1312, 1328
BseXI GCAGC 1 cut(s) 701
BseYI CCCAGC 1 cut(s) 902
Bsh1236I CGCG 3 cut(s) 32, 105, 1094
Bsh1285I CGRYCG 1 cut(s) 834
BshFI GGCC 3 cut(s) 745, 751, 889
BshNI GGYRCC 3 cut(s) 17, 23, 494
BsiEI CGRYCG 1 cut(s) 834
BsiHKAI GWGCWC 1 cut(s) 1322
BsiSI CCGG 3 cut(s) 21, 96, 699
BslI CCNNNNNNNGG 3 cut(s) 475, 705, 1147
BsmAI GTCTC 4 cut(s) 246, 357, 696, 806
BsmBI CGTCTC 1 cut(s) 806
BsmI GAATGC 1 cut(s) 796
BsnI GGCC 3 cut(s) 745, 751, 889
Bsp119I TTCGAA 1 cut(s) 514
Bsp1286I GDGCHC 1 cut(s) 1322
Bsp143I GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
Bsp19I CCATGG 1 cut(s) 577
BspACI CCGC 3 cut(s) 15, 32, 752
BspANI GGCC 3 cut(s) 745, 751, 889
BspCNI CTCAG 1 cut(s) 748
BspFNI CGCG 3 cut(s) 32, 105, 1094
BspLI GGNNCC 4 cut(s) 19, 25, 496, 888
BspPI GGATC 3 cut(s) 650, 937, 1125
BspQI GCTCTTC 1 cut(s) 5
BspT104I TTCGAA 1 cut(s) 514
BspT107I GGYRCC 3 cut(s) 17, 23, 494
BspTI CTTAAG 1 cut(s) 289
BsrBI CCGCTC 1 cut(s) 15
BsrFI RCCGGY 1 cut(s) 20
BsrI ACTGG 3 cut(s) 323, 710, 1221
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 2 cut(s) 577, 746
BssMI GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
BssNI GRCGYC 1 cut(s) 24
BssT1I CCWWGG 1 cut(s) 577
Bst2UI CCWGG 6 cut(s) 163, 311, 747, 965, 978, 1037
Bst4CI ACNGT 2 cut(s) 158, 681
Bst6I CTCTTC 3 cut(s) 5, 263, 1140
BstACI GRCGYC 1 cut(s) 24
BstAFI CTTAAG 1 cut(s) 289
BstAPI GCANNNNNTGC 1 cut(s) 695
BstBI TTCGAA 1 cut(s) 514
BstC8I GCNNGC 5 cut(s) 22, 399, 584, 851, 1003
BstDEI CTNAG 4 cut(s) 209, 735, 845, 1340
BstDSI CCRYGG 1 cut(s) 577
BstF5I GGATG 4 cut(s) 306, 348, 484, 831
BstFNI CGCG 3 cut(s) 32, 105, 1094
BstH2I RGCGCY 1 cut(s) 27
BstHHI GCGC 1 cut(s) 26
BstKTI GATC 6 cut(s) 413, 595, 645, 799, 945, 1120
BstMAI GTCTC 4 cut(s) 246, 357, 696, 806
BstMBI GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
BstMCI CGRYCG 1 cut(s) 834
BstMWI GCNNNNNNNGC 6 cut(s) 21, 38, 695, 751, 846, 886
BstNI CCWGG 6 cut(s) 163, 311, 747, 965, 978, 1037
BstNSI RCATGY 1 cut(s) 1244
BstSCI CCNGG 6 cut(s) 161, 309, 745, 963, 976, 1035
BstUI CGCG 3 cut(s) 32, 105, 1094
BstV1I GCAGC 1 cut(s) 701
BstV2I GAAGAC 1 cut(s) 106
BstX2I RGATCY 3 cut(s) 410, 942, 1117
BstYI RGATCY 3 cut(s) 410, 942, 1117
BsuRI GGCC 3 cut(s) 745, 751, 889
BtgI CCRYGG 1 cut(s) 577
BtrI CACGTC 1 cut(s) 816
BtsCI GGATG 4 cut(s) 306, 348, 484, 831
Cac8I GCNNGC 5 cut(s) 22, 399, 584, 851, 1003
CaiI CAGNNNCTG 1 cut(s) 1210
CfoI GCGC 1 cut(s) 26
Cfr10I RCCGGY 1 cut(s) 20
Cfr13I GGNCC 5 cut(s) 93, 743, 749, 887, 1219
CseI GACGC 2 cut(s) 38, 111
CsiI ACCWGGT 1 cut(s) 1035
Csp6I GTAC 7 cut(s) 217, 392, 495, 677, 970, 992, 1026
CviAII CATG 4 cut(s) 578, 590, 1142, 1241
CviQI GTAC 7 cut(s) 217, 392, 495, 677, 970, 992, 1026
DdeI CTNAG 4 cut(s) 209, 735, 845, 1340
DinI GGCGCC 1 cut(s) 25
DpnI GATC 6 cut(s) 412, 594, 644, 798, 944, 1119
DpnII GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
Eam1104I CTCTTC 3 cut(s) 5, 263, 1140
EarI CTCTTC 3 cut(s) 5, 263, 1140
Ecl136II GAGCTC 1 cut(s) 1320
Eco130I CCWWGG 1 cut(s) 577
Eco24I GRGCYC 1 cut(s) 1322
Eco47I GGWCC 2 cut(s) 93, 1219
Eco53kI GAGCTC 1 cut(s) 1320
Eco57I CTGAAG 2 cut(s) 839, 1272
EcoICRI GAGCTC 1 cut(s) 1320
EcoO109I RGGNCCY 1 cut(s) 887
EcoRI GAATTC 2 cut(s) 327, 429
EcoRII CCWGG 6 cut(s) 161, 309, 745, 963, 976, 1035
EcoT14I CCWWGG 1 cut(s) 577
EcoT38I GRGCYC 1 cut(s) 1322
EgeI GGCGCC 1 cut(s) 25
EheI GGCGCC 1 cut(s) 25
ErhI CCWWGG 1 cut(s) 577
Esp3I CGTCTC 1 cut(s) 806
FaeI CATG 4 cut(s) 581, 593, 1145, 1244
FatI CATG 4 cut(s) 577, 589, 1141, 1240
Fnu4HI GCNGC 2 cut(s) 690, 752
FokI GGATG 4 cut(s) 293, 335, 491, 838
FriOI GRGCYC 1 cut(s) 1322
Fsp4HI GCNGC 2 cut(s) 690, 752
FspBI CTAG 3 cut(s) 227, 360, 521
GlaI GCGC 1 cut(s) 25
GluI GCNGC 2 cut(s) 690, 752
GsaI CCCAGC 1 cut(s) 906
GsuI CTGGAG 1 cut(s) 340
HaeII RGCGCY 1 cut(s) 27
HaeIII GGCC 3 cut(s) 745, 751, 889
HapII CCGG 3 cut(s) 21, 96, 699
HgaI GACGC 2 cut(s) 38, 111
HhaI GCGC 1 cut(s) 26
Hin1I GRCGYC 1 cut(s) 24
Hin1II CATG 4 cut(s) 581, 593, 1145, 1244
Hin6I GCGC 1 cut(s) 24
HinP1I GCGC 1 cut(s) 24
HindIII AAGCTT 1 cut(s) 602
HinfI GANTC 4 cut(s) 230, 1070, 1310, 1344
HpaII CCGG 3 cut(s) 21, 96, 699
Hpy166II GTNNAC 2 cut(s) 154, 727
Hpy188I TCNGA 6 cut(s) 171, 1075, 1206, 1270, 1291, 1343
Hpy188III TCNNGA 5 cut(s) 87, 360, 370, 458, 857
Hpy8I GTNNAC 2 cut(s) 154, 727
Hpy99I CGWCG 1 cut(s) 32
HpyAV CCTTC 2 cut(s) 84, 1190
HpyCH4III ACNGT 2 cut(s) 158, 681
HpyCH4IV ACGT 1 cut(s) 815
HpyCH4V TGCA 8 cut(s) 146, 200, 397, 630, 794, 923, 940, 1049
HpyF10VI GCNNNNNNNGC 6 cut(s) 21, 38, 695, 751, 846, 886
HpyF3I CTNAG 4 cut(s) 209, 735, 845, 1340
HpySE526I ACGT 1 cut(s) 815
Hsp92I GRCGYC 1 cut(s) 24
Hsp92II CATG 4 cut(s) 581, 593, 1145, 1244
HspAI GCGC 1 cut(s) 24
KasI GGCGCC 1 cut(s) 23
KpnI GGTACC 1 cut(s) 498
KroI GCCGGC 1 cut(s) 20
KroNI GCCGGC 1 cut(s) 22
Kzo9I GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
LguI GCTCTTC 1 cut(s) 5
LmnI GCTCC 5 cut(s) 67, 579, 1317, 1325, 1341
Lsp1109I GCAGC 1 cut(s) 701
LweI GCATC 4 cut(s) 357, 685, 1093, 1261
MabI ACCWGGT 1 cut(s) 1035
MaeI CTAG 3 cut(s) 227, 360, 521
MaeII ACGT 1 cut(s) 815
MalI GATC 6 cut(s) 412, 594, 644, 798, 944, 1119
MbiI CCGCTC 1 cut(s) 15
MboI GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
MboII GAAGA 8 cut(s) 19, 22, 111, 280, 294, 1157, 1292, 1304
MflI RGATCY 3 cut(s) 410, 942, 1117
MhlI GDGCHC 1 cut(s) 1322
Mly113I GGCGCC 1 cut(s) 24
MlyI GAGTC 3 cut(s) 224, 1319, 1338
MmeI TCCRAC 1 cut(s) 118
MnlI CCTC 8 cut(s) 142, 264, 315, 419, 984, 1141, 1333, 1349
MroNI GCCGGC 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 510
MseI TTAA 6 cut(s) 290, 437, 450, 500, 684, 1233
MspA1I CMGCKG 1 cut(s) 692
MspCI CTTAAG 1 cut(s) 289
MspI CCGG 3 cut(s) 21, 96, 699
MspR9I CCNGG 6 cut(s) 163, 311, 747, 965, 978, 1037
Mva1269I GAATGC 1 cut(s) 796
MvaI CCWGG 6 cut(s) 163, 311, 747, 965, 978, 1037
MvnI CGCG 3 cut(s) 32, 105, 1094
MwoI GCNNNNNNNGC 6 cut(s) 21, 38, 695, 751, 846, 886
NaeI GCCGGC 1 cut(s) 22
NarI GGCGCC 1 cut(s) 24
NcoI CCATGG 1 cut(s) 577
NdeII GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
NgoMIV GCCGGC 1 cut(s) 20
NlaIII CATG 4 cut(s) 581, 593, 1145, 1244
NlaIV GGNNCC 4 cut(s) 19, 25, 496, 888
NspI RCATGY 1 cut(s) 1244
NspV TTCGAA 1 cut(s) 514
PciSI GCTCTTC 1 cut(s) 5
PctI GAATGC 1 cut(s) 796
PdiI GCCGGC 1 cut(s) 22
PdmI GAANNNNTTC 1 cut(s) 510
PfeI GAWTC 1 cut(s) 1070
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 2 cut(s) 691, 753
PleI GAGTC 3 cut(s) 224, 1318, 1338
PluTI GGCGCC 1 cut(s) 27
PpsI GAGTC 3 cut(s) 224, 1318, 1338
PshBI ATTAAT 1 cut(s) 450
Psp124BI GAGCTC 1 cut(s) 1322
Psp6I CCWGG 6 cut(s) 161, 309, 745, 963, 976, 1035
PspFI CCCAGC 1 cut(s) 902
PspGI CCWGG 6 cut(s) 161, 309, 745, 963, 976, 1035
PspN4I GGNNCC 4 cut(s) 19, 25, 496, 888
PspPI GGNCC 5 cut(s) 93, 743, 749, 887, 1219
PstNI CAGNNNCTG 1 cut(s) 1210
PsuI RGATCY 3 cut(s) 410, 942, 1117
PvuII CAGCTG 1 cut(s) 692
RsaI GTAC 7 cut(s) 218, 393, 496, 678, 971, 993, 1027
RsaNI GTAC 7 cut(s) 217, 392, 495, 677, 970, 992, 1026
SacI GAGCTC 1 cut(s) 1322
SapI GCTCTTC 1 cut(s) 5
SaqAI TTAA 6 cut(s) 290, 437, 450, 500, 684, 1233
SatI GCNGC 2 cut(s) 690, 752
Sau3AI GATC 6 cut(s) 410, 592, 642, 796, 942, 1117
Sau96I GGNCC 5 cut(s) 93, 743, 749, 887, 1219
SchI GAGTC 3 cut(s) 224, 1319, 1338
ScrFI CCNGG 6 cut(s) 163, 311, 747, 965, 978, 1037
SduI GDGCHC 1 cut(s) 1322
SexAI ACCWGGT 1 cut(s) 1035
SfaNI GCATC 4 cut(s) 357, 685, 1093, 1261
SfoI GGCGCC 1 cut(s) 25
SfuI TTCGAA 1 cut(s) 514
SinI GGWCC 2 cut(s) 93, 1219
SmlI CTYRAG 3 cut(s) 243, 289, 1223
SmoI CTYRAG 3 cut(s) 243, 289, 1223
SsiI CCGC 3 cut(s) 15, 32, 752
SspDI GGCGCC 1 cut(s) 23
SspI AATATT 1 cut(s) 454
SspMI CTAG 3 cut(s) 227, 360, 521
SstI GAGCTC 1 cut(s) 1322
StyD4I CCNGG 6 cut(s) 161, 309, 745, 963, 976, 1035
StyI CCWWGG 1 cut(s) 577
TaaI ACNGT 2 cut(s) 158, 681
TaiI ACGT 1 cut(s) 818
TaqI TCGA 7 cut(s) 433, 487, 514, 834, 950, 1163, 1183
TaqII GACCGA 1 cut(s) 820
TatI WGTACW 1 cut(s) 391
TauI GCSGC 1 cut(s) 754
TfiI GAWTC 1 cut(s) 1070
Tru1I TTAA 6 cut(s) 290, 437, 450, 500, 684, 1233
Tru9I TTAA 6 cut(s) 290, 437, 450, 500, 684, 1233
TseI GCWGC 1 cut(s) 689
TspDTI ATGAA 6 cut(s) 125, 519, 645, 930, 1158, 1187
Vha464I CTTAAG 1 cut(s) 289
VpaK11BI GGWCC 2 cut(s) 93, 1219
VspI ATTAAT 1 cut(s) 450
XapI RAATTY 6 cut(s) 327, 429, 802, 917, 1136, 1259
XbaI TCTAGA 1 cut(s) 359
XceI RCATGY 1 cut(s) 1244
XmnI GAANNNNTTC 1 cut(s) 510
XspI CTAG 3 cut(s) 227, 360, 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.