Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002985

Physical Location & Seq

Genomic Coordinates Reverse (-)

50594166 .. 50604298

Gene Structure 10133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG343300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGCAATGCACCACAAGCTCGCCGTGATTCTCGATCACCCTCAAAACGACGCCGAATTTCTCCTCGTGAAGCAGACGCGCCCTCCCAAATTCGACGACGATGAGTACGACTCGTTCGTCGATTCCGACCTCTGGGACTTGCCCTCCGCGCAATTGAACCTTTCAGAAGGTCAATCCGAGTCCTCAGTCGCCGTTCAAGGCGCAGAGTCGTGGTCGGAGAAGATAGAGTTGACCAAATTTGACCTGGATTCGGCTCTCAATTCGATTTTGGAACAAGTAGGGTTTAAGGCAGCTGATGCTGGAGACTGGAAGCTGTGGAAGTATGTTGAGGAAGCTCAGTTTGGGCCTGGGCCGCCAATCAATTCGGTTTTTGTTAGGGGAAAATTGGTGAATGCAGATCAAACTTTACAAGAGACGTGTAAGTGGATGTCGGTCGAAAGCTGTCTAAGCTGGCTTCAGGAAGTGAAACCAAGATGTGAGCGTGTGGGGCCTGCATATCAACGAGCCAAATTCACAACAGGGCCTTTGATAGTTGCTGGGCTTCTAAATGAATTTGCACAAACAAGAGAGTTGCAGATCCCATCGACCTTACCTTACCAGGAGTACCCTCCTGGTGTTGTGCTTGTACCTATGGGAAGCAGGACAGGAAAACCTTTTCGTACAACAAACCTGATTGTTTTTGCACCTAAAAATGTTCCAAATGATTCTGGAAAGAATGGTTTTATCGCGTGTGGAGATGCGTTGATAGTGGATCCTGGGTGTCAGTCTAAATTCCATGAAGAGCTCAGACAAATTGTAGCTGCTTTGCCGAGAAAGTTAATTGTGTTTGTTACTCATCATCATCGCGATCATGTGGATGGTCTTTCAGTTATTCAACGTTGCAATCCTGAGGCTACATTATTAGCACATGAAAATACCATGCGACGCATTGGGAAAGATGACTGGTCTCTTGGCTTTACTGCTATTTCTGGAACTGAAGAGATTTGCATTGGCGGTCAGCGGTTGATTGCCATTTTCTCTCCGGGACATACAGATGGCCATATGGGACTGCTTCACGCCAGTACTCACTCATTGATTGTAGGTGATCATTGTGTGGGTCAAGGTAGTGCTATACTGGATGTTACTTCCGGGGGAAATATGACTGATTACTTTCAATCAACATACAAATTTATGGAGATTTCCCCACATGCTTTGATTCCCATGCATGGGAGAGTTAACCTATGGCCAAAGCACATGCTTTGTGGATATCTCAGGAACCGTAGAGGTAGAGAAAGTTCCATCTTGAAAGCGATAGAAAATGGAGCTGAAACATTATTTGATATAGTTGCAAATGTATATTCTGAGGTTGACCGTAGCTTTTGGATTCCTGCTGCATCAAATGTGAGGCTTCACGTGGATCATCTAAGCCAGCAAGATAAGTTGCCAAAGGCATTTTCAATTCAGAAGTTCCAGAAAACTTGTAGACTGCATTTCTTCTCTCGATGGATGTGGGCTTACCTCAGTAACGGTGTCCTCGGAAATTGTTCAAAGCCAAGAATATCTCATCTTCTTGTTGCTGGTGTTGTTGCTAGCTCTGCCGTGTTGTACATGTTTAAAAGACGGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0031974 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0046914 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B

Protein Analysis

535

Amino Acids

59.72

Weight (kDa)

6.6

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	244 - 374	1.5e-06	Metallo-beta-lactamase superfamily
WHD_BLACT	PF17778	437 - 473	4.8e-06	Beta-lactamase associated winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25375
fragaria_vesca	FvH4_4g26975 FvH4_4g26975 FvH4_4g26975 FvH4_4g26975
malus_domestica	MD13G1039000.v1.1 MD16G1039700.v1.1
prunus_persica	Prupe.1G314400_v2.0.a1 Prupe.1G314400_v2.0.a1
pyrus_communis	pycom16g03450
rosa_chinensis	RchiOBHm_Chr2g0108931 RchiOBHm_Chr4g0434781 RchiOBHm_Chr5g0042931 RchiOBHm_Chr6g0261541 RchiOBHm_Chr7g0243441
rosa_laevigata	RLG00000006650
rosa_multiflora	Rmu_sc0007829.1_g000001 Rmu_sc0017904.1_g000001 Rmu_sc0017904.1_g000002 Rmu_sc0026857.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312600 Rroxscaffold_5G00375980
rosa_rugosa	Rorug02G0079600 Rorug04G0278300 Rorug06G0479000
rosa_samantha	Rh2AG012800 Rh2BG218400 Rh2CG210400 Rh2DG354000 Rh2DG354100 Rh4AG334700 Rh4BG343300 Rh4CG357700 Rh4DG337000 Rh7BG078500
rosa_wichuraiana	Rw1G015910 Rw4G029190 Rw7G037630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
AccI	GTMKAC	1 cut(s)	1462
AccII	CGCG	4 cut(s)	79, 149, 728, 846
AciI	CCGC	4 cut(s)	147, 353, 993, 1000
AclI	AACGTT	1 cut(s)	877
AclWI	GGATC	4 cut(s)	571, 746, 759, 1404
AcoI	YGGCCR	2 cut(s)	1036, 1223
AcsI	RAATTY	7 cut(s)	56, 89, 236, 509, 551, 770, 1166
AcuI	CTGAAG	2 cut(s)	440, 996
AcvI	CACGTG	1 cut(s)	1393
AcyI	GRCGYC	1 cut(s)	51
AfaI	GTAC	6 cut(s)	107, 605, 627, 661, 1063, 1586
AfiI	CCNNNNNNNGG	4 cut(s)	132, 250, 1205, 1206
AflIII	ACRYGT	2 cut(s)	416, 1587
AgsI	TTSAA	7 cut(s)	157, 197, 875, 1154, 1285, 1437, 1527
AjiI	CACGTC	1 cut(s)	417
AjnI	CCWGG	5 cut(s)	243, 346, 597, 610, 754
AjuI	GAANNNNNNNTTGG	4 cut(s)	324, 356, 1417, 1449
Alw21I	GWGCWC	1 cut(s)	786
Alw26I	GTCTC	3 cut(s)	297, 407, 951
AlwI	GGATC	4 cut(s)	571, 746, 759, 1404
AoxI	GGCC	6 cut(s)	344, 350, 488, 521, 1036, 1223
ApeKI	GCWGC	3 cut(s)	290, 800, 1370
ApoI	RAATTY	7 cut(s)	56, 89, 236, 509, 551, 770, 1166
Asp700I	GAANNNNTTC	1 cut(s)	1522
AspLEI	GCGC	3 cut(s)	81, 151, 203
AspS9I	GGNCC	4 cut(s)	344, 350, 488, 521
AsuC2I	CCSGG	2 cut(s)	1023, 1129
AsuHPI	GGTGA	3 cut(s)	29, 400, 1094
AsuNHI	GCTAGC	1 cut(s)	1568
AxyI	CCTNAGG	1 cut(s)	888
BalI	TGGCCA	2 cut(s)	1038, 1225
BamHI	GGATCC	1 cut(s)	751
BanII	GRGCYC	1 cut(s)	786
BauI	CACGAG	1 cut(s)	65
BbrPI	CACGTG	1 cut(s)	1393
Bbv12I	GWGCWC	1 cut(s)	786
BbvI	GCAGC	3 cut(s)	302, 787, 1357
BccI	CCATC	5 cut(s)	589, 851, 1028, 1286, 1476
BceAI	ACGGC	3 cut(s)	8, 176, 1562
BciT130I	CCWGG	5 cut(s)	245, 348, 599, 612, 756
BclI	TGATCA	1 cut(s)	1084
BcnI	CCSGG	2 cut(s)	1023, 1129
BcoDI	GTCTC	3 cut(s)	297, 407, 951
BfaI	CTAG	1 cut(s)	1569
BisI	GCNGC	4 cut(s)	291, 353, 801, 1371
BlsI	GCNGC	4 cut(s)	292, 354, 802, 1372
BmcAI	AGTACT	1 cut(s)	1063
Bme1390I	CCNGG	7 cut(s)	245, 348, 599, 612, 756, 1023, 1129
BmgBI	CACGTC	1 cut(s)	417
BmgT120I	GGNCC	4 cut(s)	344, 350, 488, 521
BmiI	GGNNCC	3 cut(s)	489, 753, 1256
BmrFI	CCNGG	7 cut(s)	245, 348, 599, 612, 756, 1023, 1129
BmsI	GCATC	3 cut(s)	286, 727, 1382
BmtI	GCTAGC	1 cut(s)	1572
BplI	GAGNNNNNCTC	2 cut(s)	95, 127
BpmI	CTGGAG	1 cut(s)	321
BpuMI	CCSGG	2 cut(s)	1023, 1129
BsaAI	YACGTR	1 cut(s)	1393
BsaHI	GRCGYC	1 cut(s)	51
BsaI	GGTCTC	1 cut(s)	951
BsaJI	CCNNGG	4 cut(s)	347, 755, 1128, 1513
BsaXI	ACNNNNNCTCC	4 cut(s)	67, 97, 128, 158
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 250, 1205, 1206
Bse1I	ACTGG	4 cut(s)	311, 947, 1059, 1119
Bse21I	CCTNAGG	1 cut(s)	888
Bse3DI	GCAATG	1 cut(s)	12
BseBI	CCWGG	5 cut(s)	245, 348, 599, 612, 756
BseDI	CCNNGG	4 cut(s)	347, 755, 1128, 1513
BseGI	GGATG	4 cut(s)	432, 862, 1123, 1491
BseLI	CCNNNNNNNGG	4 cut(s)	132, 250, 1205, 1206
BseMI	GCAATG	1 cut(s)	12
BseMII	CTCAG	7 cut(s)	198, 350, 799, 879, 1264, 1332, 1513
BseNI	ACTGG	4 cut(s)	311, 947, 1059, 1119
BseRI	GAGGAG	1 cut(s)	53
BseXI	GCAGC	3 cut(s)	302, 787, 1357
BseYI	CCCAGC	1 cut(s)	536
Bsh1236I	CGCG	4 cut(s)	79, 149, 728, 846
Bsh1285I	CGRYCG	1 cut(s)	435
BshFI	GGCC	6 cut(s)	346, 352, 490, 523, 1038, 1225
BsiEI	CGRYCG	1 cut(s)	435
BsiHKAI	GWGCWC	1 cut(s)	786
BsiSI	CCGG	2 cut(s)	1022, 1128
BslFI	GGGAC	3 cut(s)	149, 1038, 1059
BslI	CCNNNNNNNGG	4 cut(s)	132, 250, 1205, 1206
BsmAI	GTCTC	3 cut(s)	297, 407, 951
BsmBI	CGTCTC	1 cut(s)	407
BsmFI	GGGAC	3 cut(s)	149, 1038, 1059
BsmI	GAATGC	1 cut(s)	397
BsnI	GGCC	6 cut(s)	346, 352, 490, 523, 1038, 1225
Bso31I	GGTCTC	1 cut(s)	951
Bsp1286I	GDGCHC	1 cut(s)	786
Bsp1407I	TGTACA	1 cut(s)	1584
Bsp143I	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
Bsp68I	TCGCGA	1 cut(s)	846
BspACI	CCGC	4 cut(s)	147, 353, 993, 1000
BspANI	GGCC	6 cut(s)	346, 352, 490, 523, 1038, 1225
BspCNI	CTCAG	7 cut(s)	197, 349, 798, 880, 1263, 1333, 1512
BspFNI	CGCG	4 cut(s)	79, 149, 728, 846
BspLI	GGNNCC	3 cut(s)	489, 753, 1256
BspOI	GCTAGC	1 cut(s)	1572
BspPI	GGATC	4 cut(s)	571, 746, 759, 1404
BspQI	GCTCTTC	1 cut(s)	774
BspTNI	GGTCTC	1 cut(s)	951
BsrDI	GCAATG	1 cut(s)	12
BsrGI	TGTACA	1 cut(s)	1584
BsrI	ACTGG	4 cut(s)	311, 947, 1059, 1119
BssECI	CCNNGG	4 cut(s)	347, 755, 1128, 1513
BssMI	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
BssNI	GRCGYC	1 cut(s)	51
BssSI	CACGAG	1 cut(s)	65
Bst2BI	CACGAG	1 cut(s)	65
Bst2UI	CCWGG	5 cut(s)	245, 348, 599, 612, 756
Bst4CI	ACNGT	3 cut(s)	1259, 1352, 1508
Bst6I	CTCTTC	2 cut(s)	774, 972
BstACI	GRCGYC	1 cut(s)	51
BstAPI	GCANNNNNTGC	1 cut(s)	296
BstAUI	TGTACA	1 cut(s)	1584
BstBAI	YACGTR	1 cut(s)	1393
BstC8I	GCNNGC	5 cut(s)	21, 452, 492, 1409, 1570
BstDEI	CTNAG	9 cut(s)	184, 336, 446, 785, 888, 1250, 1341, 1403, 1499
BstF5I	GGATG	4 cut(s)	432, 862, 1123, 1491
BstFNI	CGCG	4 cut(s)	79, 149, 728, 846
BstHHI	GCGC	3 cut(s)	81, 151, 203
BstKTI	GATC	7 cut(s)	37, 400, 579, 754, 850, 1087, 1399
BstMAI	GTCTC	3 cut(s)	297, 407, 951
BstMBI	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
BstMCI	CGRYCG	1 cut(s)	435
BstMWI	GCNNNNNNNGC	7 cut(s)	16, 148, 296, 352, 447, 487, 1574
BstNI	CCWGG	5 cut(s)	245, 348, 599, 612, 756
BstNSI	RCATGY	3 cut(s)	1190, 1237, 1591
BstSCI	CCNGG	7 cut(s)	243, 346, 597, 610, 754, 1021, 1127
BstUI	CGCG	4 cut(s)	79, 149, 728, 846
BstV1I	GCAGC	3 cut(s)	302, 787, 1357
BstX2I	RGATCY	2 cut(s)	576, 751
BstYI	RGATCY	2 cut(s)	576, 751
Bsu36I	CCTNAGG	1 cut(s)	888
BsuRI	GGCC	6 cut(s)	346, 352, 490, 523, 1038, 1225
BtgZI	GCGATG	1 cut(s)	827
BtrI	CACGTC	1 cut(s)	417
BtsCI	GGATG	4 cut(s)	432, 862, 1123, 1491
BtuMI	TCGCGA	1 cut(s)	846
Cac8I	GCNNGC	5 cut(s)	21, 452, 492, 1409, 1570
CfoI	GCGC	3 cut(s)	81, 151, 203
Cfr13I	GGNCC	4 cut(s)	344, 350, 488, 521
CseI	GACGC	3 cut(s)	59, 85, 933
Csp6I	GTAC	6 cut(s)	106, 604, 626, 660, 1062, 1585
CspCI	CAANNNNNGTGG	2 cut(s)	1173, 1208
CviAII	CATG	9 cut(s)	776, 851, 908, 919, 1187, 1201, 1205, 1234, 1588
CviQI	GTAC	6 cut(s)	106, 604, 626, 660, 1062, 1585
DdeI	CTNAG	9 cut(s)	184, 336, 446, 785, 888, 1250, 1341, 1403, 1499
DpnI	GATC	7 cut(s)	36, 399, 578, 753, 849, 1086, 1398
DpnII	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
DraI	TTTAAA	1 cut(s)	1594
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	2 cut(s)	1036, 1223
Eam1104I	CTCTTC	2 cut(s)	774, 972
EarI	CTCTTC	2 cut(s)	774, 972
Ecl136II	GAGCTC	1 cut(s)	784
Eco24I	GRGCYC	1 cut(s)	786
Eco31I	GGTCTC	1 cut(s)	951
Eco32I	GATATC	1 cut(s)	1247
Eco53kI	GAGCTC	1 cut(s)	784
Eco57I	CTGAAG	2 cut(s)	440, 996
Eco72I	CACGTG	1 cut(s)	1393
Eco81I	CCTNAGG	1 cut(s)	888
EcoICRI	GAGCTC	1 cut(s)	784
EcoO109I	RGGNCCY	2 cut(s)	488, 521
EcoRII	CCWGG	5 cut(s)	243, 346, 597, 610, 754
EcoRV	GATATC	1 cut(s)	1247
EcoT22I	ATGCAT	1 cut(s)	1206
EcoT38I	GRGCYC	1 cut(s)	786
Esp3I	CGTCTC	1 cut(s)	407
FaeI	CATG	9 cut(s)	779, 854, 911, 922, 1190, 1204, 1208, 1237, 1591
FaqI	GGGAC	3 cut(s)	149, 1038, 1059
FatI	CATG	9 cut(s)	775, 850, 907, 918, 1186, 1200, 1204, 1233, 1587
FauNDI	CATATG	1 cut(s)	1041
FbaI	TGATCA	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	1462
Fnu4HI	GCNGC	4 cut(s)	291, 353, 801, 1371
FokI	GGATG	4 cut(s)	439, 869, 1130, 1498
FriOI	GRGCYC	1 cut(s)	786
Fsp4HI	GCNGC	4 cut(s)	291, 353, 801, 1371
FspBI	CTAG	1 cut(s)	1569
GlaI	GCGC	3 cut(s)	80, 150, 202
GluI	GCNGC	4 cut(s)	291, 353, 801, 1371
GsaI	CCCAGC	1 cut(s)	540
GsuI	CTGGAG	1 cut(s)	321
HaeIII	GGCC	6 cut(s)	346, 352, 490, 523, 1038, 1225
HapII	CCGG	2 cut(s)	1022, 1128
HgaI	GACGC	3 cut(s)	59, 85, 933
HhaI	GCGC	3 cut(s)	81, 151, 203
Hin1I	GRCGYC	1 cut(s)	51
Hin1II	CATG	9 cut(s)	779, 854, 911, 922, 1190, 1204, 1208, 1237, 1591
Hin6I	GCGC	3 cut(s)	79, 149, 201
HinP1I	GCGC	3 cut(s)	79, 149, 201
HincII	GTYRAC	3 cut(s)	231, 1216, 1348
HindII	GTYRAC	3 cut(s)	231, 1216, 1348
HinfI	GANTC	9 cut(s)	28, 110, 122, 179, 206, 248, 704, 1195, 1363
HpaI	GTTAAC	1 cut(s)	1216
HpaII	CCGG	2 cut(s)	1022, 1128
HphI	GGTGA	3 cut(s)	29, 400, 1094
Hpy166II	GTNNAC	4 cut(s)	231, 1216, 1348, 1463
Hpy188I	TCNGA	8 cut(s)	127, 166, 178, 217, 788, 1342, 1443, 1517
Hpy8I	GTNNAC	4 cut(s)	231, 1216, 1348, 1463
Hpy99I	CGWCG	5 cut(s)	53, 98, 101, 122, 927
HpyAV	CCTTC	1 cut(s)	161
HpyCH4III	ACNGT	3 cut(s)	1259, 1352, 1508
HpyCH4IV	ACGT	3 cut(s)	416, 877, 1392
HpyF10VI	GCNNNNNNNGC	7 cut(s)	16, 148, 296, 352, 447, 487, 1574
HpyF3I	CTNAG	9 cut(s)	184, 336, 446, 785, 888, 1250, 1341, 1403, 1499
HpySE526I	ACGT	3 cut(s)	416, 877, 1392
Hsp92I	GRCGYC	1 cut(s)	51
Hsp92II	CATG	9 cut(s)	779, 854, 911, 922, 1190, 1204, 1208, 1237, 1591
HspAI	GCGC	3 cut(s)	79, 149, 201
Ksp22I	TGATCA	1 cut(s)	1084
KspAI	GTTAAC	1 cut(s)	1216
Kzo9I	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
LguI	GCTCTTC	1 cut(s)	774
LmnI	GCTCC	1 cut(s)	1301
Lsp1109I	GCAGC	3 cut(s)	302, 787, 1357
LweI	GCATC	3 cut(s)	286, 727, 1382
MaeI	CTAG	1 cut(s)	1569
MaeII	ACGT	3 cut(s)	416, 877, 1392
MaeIII	GTNAC	3 cut(s)	829, 1120, 1502
MalI	GATC	7 cut(s)	36, 399, 578, 753, 849, 1086, 1398
MboI	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
MboII	GAAGA	5 cut(s)	232, 791, 989, 1465, 1538
MfeI	CAATTG	1 cut(s)	152
MflI	RGATCY	2 cut(s)	576, 751
MhlI	GDGCHC	1 cut(s)	786
MlsI	TGGCCA	2 cut(s)	1038, 1225
MluNI	TGGCCA	2 cut(s)	1038, 1225
MlyI	GAGTC	3 cut(s)	104, 188, 215
MmeI	TCCRAC	2 cut(s)	150, 195
Mox20I	TGGCCA	2 cut(s)	1038, 1225
Mph1103I	ATGCAT	1 cut(s)	1206
MroXI	GAANNNNTTC	1 cut(s)	1522
MscI	TGGCCA	2 cut(s)	1038, 1225
MseI	TTAA	4 cut(s)	285, 818, 1215, 1593
MslI	CAYNNNNRTG	2 cut(s)	855, 1032
Msp20I	TGGCCA	2 cut(s)	1038, 1225
MspA1I	CMGCKG	2 cut(s)	293, 1000
MspI	CCGG	2 cut(s)	1022, 1128
MspR9I	CCNGG	7 cut(s)	245, 348, 599, 612, 756, 1023, 1129
MunI	CAATTG	1 cut(s)	152
Mva1269I	GAATGC	1 cut(s)	397
MvaI	CCWGG	5 cut(s)	245, 348, 599, 612, 756
MvnI	CGCG	4 cut(s)	79, 149, 728, 846
MwoI	GCNNNNNNNGC	7 cut(s)	16, 148, 296, 352, 447, 487, 1574
NciI	CCSGG	2 cut(s)	1023, 1129
NdeI	CATATG	1 cut(s)	1041
NdeII	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
NheI	GCTAGC	1 cut(s)	1568
NlaIII	CATG	9 cut(s)	779, 854, 911, 922, 1190, 1204, 1208, 1237, 1591
NlaIV	GGNNCC	3 cut(s)	489, 753, 1256
NmeAIII	GCCGAG	1 cut(s)	834
NruI	TCGCGA	1 cut(s)	846
NsiI	ATGCAT	1 cut(s)	1206
NspI	RCATGY	3 cut(s)	1190, 1237, 1591
PciI	ACATGT	1 cut(s)	1587
PciSI	GCTCTTC	1 cut(s)	774
PcsI	WCGNNNNNNNCGW	3 cut(s)	105, 114, 123
PctI	GAATGC	1 cut(s)	397
PdmI	GAANNNNTTC	1 cut(s)	1522
PfeI	GAWTC	6 cut(s)	28, 122, 248, 704, 1195, 1363
PfoI	TCCNGGA	1 cut(s)	1021
PkrI	GCNGC	4 cut(s)	292, 354, 802, 1372
PleI	GAGTC	3 cut(s)	104, 187, 214
PmaCI	CACGTG	1 cut(s)	1393
PmlI	CACGTG	1 cut(s)	1393
PpsI	GAGTC	3 cut(s)	104, 187, 214
Ppu21I	YACGTR	1 cut(s)	1393
PscI	ACATGT	1 cut(s)	1587
Psp124BI	GAGCTC	1 cut(s)	786
Psp1406I	AACGTT	1 cut(s)	877
Psp6I	CCWGG	5 cut(s)	243, 346, 597, 610, 754
PspCI	CACGTG	1 cut(s)	1393
PspFI	CCCAGC	1 cut(s)	536
PspGI	CCWGG	5 cut(s)	243, 346, 597, 610, 754
PspN4I	GGNNCC	3 cut(s)	489, 753, 1256
PspPI	GGNCC	4 cut(s)	344, 350, 488, 521
PsrI	GAACNNNNNNTAC	4 cut(s)	98, 130, 1258, 1290
PsuI	RGATCY	2 cut(s)	576, 751
PvuII	CAGCTG	1 cut(s)	293
RruI	TCGCGA	1 cut(s)	846
RsaI	GTAC	6 cut(s)	107, 605, 627, 661, 1063, 1586
RsaNI	GTAC	6 cut(s)	106, 604, 626, 660, 1062, 1585
RseI	CAYNNNNRTG	2 cut(s)	855, 1032
SacI	GAGCTC	1 cut(s)	786
SapI	GCTCTTC	1 cut(s)	774
SaqAI	TTAA	4 cut(s)	285, 818, 1215, 1593
SatI	GCNGC	4 cut(s)	291, 353, 801, 1371
Sau3AI	GATC	7 cut(s)	34, 397, 576, 751, 847, 1084, 1396
Sau96I	GGNCC	4 cut(s)	344, 350, 488, 521
ScaI	AGTACT	1 cut(s)	1063
SchI	GAGTC	3 cut(s)	104, 188, 215
ScrFI	CCNGG	7 cut(s)	245, 348, 599, 612, 756, 1023, 1129
SduI	GDGCHC	1 cut(s)	786
SfaNI	GCATC	3 cut(s)	286, 727, 1382
SmiMI	CAYNNNNRTG	2 cut(s)	855, 1032
SsiI	CCGC	4 cut(s)	147, 353, 993, 1000
SspMI	CTAG	1 cut(s)	1569
SstI	GAGCTC	1 cut(s)	786
StyD4I	CCNGG	7 cut(s)	243, 346, 597, 610, 754, 1021, 1127
TaaI	ACNGT	3 cut(s)	1259, 1352, 1508
TaiI	ACGT	3 cut(s)	419, 880, 1395
TaqI	TCGA	7 cut(s)	33, 93, 120, 263, 435, 584, 1480
TaqII	GACCGA	1 cut(s)	421
TatI	WGTACW	2 cut(s)	1061, 1584
TauI	GCSGC	1 cut(s)	355
TfiI	GAWTC	6 cut(s)	28, 122, 248, 704, 1195, 1363
Tru1I	TTAA	4 cut(s)	285, 818, 1215, 1593
Tru9I	TTAA	4 cut(s)	285, 818, 1215, 1593
TseI	GCWGC	3 cut(s)	290, 800, 1370
TspDTI	ATGAA	3 cut(s)	564, 792, 924
XapI	RAATTY	7 cut(s)	56, 89, 236, 509, 551, 770, 1166
XceI	RCATGY	3 cut(s)	1190, 1237, 1591
XcmI	CCANNNNNNNNNTGG	1 cut(s)	241
XmiI	GTMKAC	1 cut(s)	1462
XmnI	GAANNNNTTC	1 cut(s)	1522
XspI	CTAG	1 cut(s)	1569
ZrmI	AGTACT	1 cut(s)	1063
Zsp2I	ATGCAT	1 cut(s)	1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.