Metallo-beta-lactamase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G25375 |
| fragaria_vesca | FvH4_4g26975 FvH4_4g26975 FvH4_4g26975 FvH4_4g26975 |
| malus_domestica | MD13G1039000.v1.1 MD16G1039700.v1.1 |
| prunus_persica | Prupe.1G314400_v2.0.a1 Prupe.1G314400_v2.0.a1 |
| pyrus_communis | pycom16g03450 |
| rosa_chinensis | RchiOBHm_Chr2g0108931 RchiOBHm_Chr4g0434781 RchiOBHm_Chr5g0042931 RchiOBHm_Chr6g0261541 RchiOBHm_Chr7g0243441 |
| rosa_laevigata | RLG00000006650 |
| rosa_multiflora | Rmu_sc0007829.1_g000001 Rmu_sc0017904.1_g000001 Rmu_sc0017904.1_g000002 Rmu_sc0026857.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00312600 Rroxscaffold_5G00375980 |
| rosa_rugosa | Rorug02G0079600 Rorug04G0278300 Rorug06G0479000 |
| rosa_samantha | Rh2AG012800 Rh2BG218400 Rh2CG210400 Rh2DG354000 Rh2DG354100 Rh4AG334700 Rh4BG343300 Rh4CG357700 Rh4DG337000 Rh7BG078500 |
| rosa_wichuraiana | Rw1G015910 Rw4G029190 Rw7G037630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 155 |
| AclWI | GGATC | 2 cut(s) | 173, 186 |
| AcsI | RAATTY | 2 cut(s) | 12, 197 |
| AcuI | CTGAAG | 1 cut(s) | 267 |
| AfaI | GTAC | 3 cut(s) | 32, 54, 88 |
| AjiI | CACGTC | 1 cut(s) | 26 |
| AjnI | CCWGG | 3 cut(s) | 37, 96, 181 |
| Alw26I | GTCTC | 2 cut(s) | 16, 250 |
| AlwI | GGATC | 2 cut(s) | 173, 186 |
| ApoI | RAATTY | 2 cut(s) | 12, 197 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 14, 47 |
| BamHI | GGATCC | 1 cut(s) | 178 |
| BccI | CCATC | 1 cut(s) | 242 |
| BciT130I | CCWGG | 3 cut(s) | 39, 98, 183 |
| BcoDI | GTCTC | 2 cut(s) | 16, 250 |
| Bme1390I | CCNGG | 3 cut(s) | 39, 98, 183 |
| BmgBI | CACGTC | 1 cut(s) | 26 |
| BmiI | GGNNCC | 1 cut(s) | 180 |
| BmrFI | CCNGG | 3 cut(s) | 39, 98, 183 |
| BmsI | GCATC | 2 cut(s) | 154, 224 |
| BsaJI | CCNNGG | 1 cut(s) | 182 |
| BseBI | CCWGG | 3 cut(s) | 39, 98, 183 |
| BseDI | CCNNGG | 1 cut(s) | 182 |
| BseGI | GGATG | 1 cut(s) | 267 |
| BseMII | CTCAG | 1 cut(s) | 299 |
| Bsh1236I | CGCG | 1 cut(s) | 155 |
| BsmAI | GTCTC | 2 cut(s) | 16, 250 |
| BsmBI | CGTCTC | 2 cut(s) | 16, 250 |
| Bsp143I | GATC | 2 cut(s) | 6, 178 |
| BspCNI | CTCAG | 1 cut(s) | 300 |
| BspFNI | CGCG | 1 cut(s) | 155 |
| BspLI | GGNNCC | 1 cut(s) | 180 |
| BspPI | GGATC | 2 cut(s) | 173, 186 |
| BssECI | CCNNGG | 1 cut(s) | 182 |
| BssMI | GATC | 2 cut(s) | 6, 178 |
| Bst2UI | CCWGG | 3 cut(s) | 39, 98, 183 |
| Bst6I | CTCTTC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 308 |
| BstF5I | GGATG | 1 cut(s) | 267 |
| BstFNI | CGCG | 1 cut(s) | 155 |
| BstKTI | GATC | 2 cut(s) | 9, 181 |
| BstMAI | GTCTC | 2 cut(s) | 16, 250 |
| BstMBI | GATC | 2 cut(s) | 6, 178 |
| BstNI | CCWGG | 3 cut(s) | 39, 98, 183 |
| BstSCI | CCNGG | 3 cut(s) | 37, 96, 181 |
| BstUI | CGCG | 1 cut(s) | 155 |
| BstX2I | RGATCY | 1 cut(s) | 178 |
| BstYI | RGATCY | 1 cut(s) | 178 |
| BtrI | CACGTC | 1 cut(s) | 26 |
| BtsCI | GGATG | 1 cut(s) | 267 |
| CsiI | ACCWGGT | 1 cut(s) | 96 |
| Csp6I | GTAC | 3 cut(s) | 31, 53, 87 |
| CviAII | CATG | 1 cut(s) | 203 |
| CviJI | RGCY | 1 cut(s) | 245 |
| CviKI_1 | RGCY | 1 cut(s) | 245 |
| CviQI | GTAC | 3 cut(s) | 31, 53, 87 |
| DdeI | CTNAG | 1 cut(s) | 308 |
| DpnI | GATC | 2 cut(s) | 8, 180 |
| DpnII | GATC | 2 cut(s) | 6, 178 |
| Eam1104I | CTCTTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 201 |
| Eco57I | CTGAAG | 1 cut(s) | 267 |
| EcoRII | CCWGG | 3 cut(s) | 37, 96, 181 |
| Esp3I | CGTCTC | 2 cut(s) | 16, 250 |
| FaeI | CATG | 1 cut(s) | 206 |
| FaiI | YATR | 2 cut(s) | 59, 204 |
| FatI | CATG | 1 cut(s) | 202 |
| FokI | GGATG | 1 cut(s) | 274 |
| Hin1II | CATG | 1 cut(s) | 206 |
| HinfI | GANTC | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 1 cut(s) | 309 |
| Hpy188III | TCNNGA | 2 cut(s) | 135, 219 |
| HpyAV | CCTTC | 1 cut(s) | 242 |
| HpyCH4IV | ACGT | 1 cut(s) | 25 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 110, 215, 275 |
| HpyF3I | CTNAG | 1 cut(s) | 308 |
| HpySE526I | ACGT | 1 cut(s) | 25 |
| Hsp92II | CATG | 1 cut(s) | 206 |
| Kzo9I | GATC | 2 cut(s) | 6, 178 |
| LweI | GCATC | 2 cut(s) | 154, 224 |
| MabI | ACCWGGT | 1 cut(s) | 96 |
| MaeII | ACGT | 1 cut(s) | 25 |
| MalI | GATC | 2 cut(s) | 8, 180 |
| MboI | GATC | 2 cut(s) | 6, 178 |
| MboII | GAAGA | 2 cut(s) | 218, 287 |
| MflI | RGATCY | 1 cut(s) | 178 |
| MluCI | AATT | 4 cut(s) | 12, 197, 276, 316 |
| MmeI | TCCRAC | 1 cut(s) | 308 |
| MnlI | CCTC | 1 cut(s) | 45 |
| MseI | TTAA | 1 cut(s) | 319 |
| MspR9I | CCNGG | 3 cut(s) | 39, 98, 183 |
| MvaI | CCWGG | 3 cut(s) | 39, 98, 183 |
| MvnI | CGCG | 1 cut(s) | 155 |
| NdeII | GATC | 2 cut(s) | 6, 178 |
| NlaIII | CATG | 1 cut(s) | 206 |
| NlaIV | GGNNCC | 1 cut(s) | 180 |
| PfeI | GAWTC | 1 cut(s) | 131 |
| Psp6I | CCWGG | 3 cut(s) | 37, 96, 181 |
| PspGI | CCWGG | 3 cut(s) | 37, 96, 181 |
| PspN4I | GGNNCC | 1 cut(s) | 180 |
| PsuI | RGATCY | 1 cut(s) | 178 |
| RsaI | GTAC | 3 cut(s) | 32, 54, 88 |
| RsaNI | GTAC | 3 cut(s) | 31, 53, 87 |
| SaqAI | TTAA | 1 cut(s) | 319 |
| Sau3AI | GATC | 2 cut(s) | 6, 178 |
| ScrFI | CCNGG | 3 cut(s) | 39, 98, 183 |
| SetI | ASST | 5 cut(s) | 28, 58, 82, 99, 115 |
| SexAI | ACCWGGT | 1 cut(s) | 96 |
| SfaNI | GCATC | 2 cut(s) | 154, 224 |
| Sse9I | AATT | 4 cut(s) | 12, 197, 276, 316 |
| SspI | AATATT | 1 cut(s) | 228 |
| StyD4I | CCNGG | 3 cut(s) | 37, 96, 181 |
| TaiI | ACGT | 1 cut(s) | 28 |
| TasI | AATT | 4 cut(s) | 12, 197, 276, 316 |
| TfiI | GAWTC | 1 cut(s) | 131 |
| Tru1I | TTAA | 1 cut(s) | 319 |
| Tru9I | TTAA | 1 cut(s) | 319 |
| TspDTI | ATGAA | 2 cut(s) | 219, 287 |
| TspGWI | ACGGA | 1 cut(s) | 274 |
| XapI | RAATTY | 2 cut(s) | 12, 197 |