Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001789

Physical Location & Seq

Genomic Coordinates Reverse (-)

9720733 .. 9724800

Gene Structure 4068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G27910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGATGTTAATGAGGTTGAAGAAAATTTCTTTGCCCCTGGTGATGCCAAGCTACACGGAAAAATGTGCAATGCCCTTTCAGTGATCTACTGCAAGATCATGTCTATTTTCCCGTCGCTTGAAGCTGCTAGGCCGAGAAGCAAATCTGGAATTCAAGCTTTGTGTTCACTTCACGTGGTTTTAGAAAAAGTGAAGAACATTCTACGCCATTGCACTGAATCTAGTAAACTTTATTTGGCTATAACAGGGGATTCAGTAGTTTTGAAATTTGAGAAGGCGAAATCATCTCTTACAGATAGCCTTAGGCGTGTTGAAGATATAGTCCAACAGTCTATTGGATCTCAGCTTTTGGAGATTTTGATGGAGTTAGAGAACACCGAGTTTTCACTTGATCCAGCAGAGAAGGAAATTGGCGATCAAATCATTGGATTGCTGCAACAAGGGGGGAATTTTGAGAGCTCATCTGATAATAATGAACTTGAGGTTTTCCATCAGGCTGCTACTAGACTAGGTATCACTTCTTCTAGAGCAGCTCTCACAGAGCGAAGATGCCTCAAGAAACTCATTGAGAGGGCCCGAATGGAGGATGACAAGAGGAAAGAATCAATTGTGGCTTATTTATTACATCTCATGAGGAAATACTCAAAGCTATTCAGAAGTGAGATCTGGGATGACAATGATTCACAGGGTAGTAGTTCATTGCCTTGTTCACCTACTATCCAGGGTTCTATAGACGATGCCCATGGTCGTGCTTTTGACCGTCAGCTGTCAAAACTGAGTTCCTTTAACTTCAGATCCTGCAATAACAATAGGAGATCTTCGCAGATGTCTGTTCCGCCAGAAGAATTGAGGTGTCCGATATCTTTGCAGCTTATGTATGACCCTGTCATTATCGCGTCTGGGCAAACATATGAGAGAATCTGTATTGAGAAATGGTTTAGTGATGGACACAACACATGTCCCAAAACTCACCAGCAGCTCTCTCATCTTTGCTTGACTCCTAACTACTGTGTCAAGGCTCTAATTTCTAGCTGGTGTGAACAGAACGGCGTTCAGGTCCCTGATGGACCCCCTGAGTCTCTAGACCTTAACTATTGGAGGTTGGCGTTGTCTGTGTCCGAGTCCACCGATACGAGATCAGCAAAACGTGTTGGTTCTTGTAAGTTGAAGGATGTGAAGGTGGTTCCTTTGGAAGAAAGTGGAACCATTAAAGAGGAAGCCTGTGAATCAGAATACCAGGAAGATCAAGTTACTCTTGTTGAAAGATGTACGGAATTGTTGACCACTTTAACTGACGTGGATACCTTAAGAAAGAAATGCAGAGTTGTTGAGCAGATAAGAGTATTGCTAAAAGATGATGAGGAGGCCAGGATTCTCATGGGGGAAAATGGGTGTGTTGAAGCGTTGCTTCAGTTTCTGGGATCAGCTCTGAATGAAAATAACGCTTCAGCCCAAAAAGTTGGAGCCATGGCTCTCTTTAACTTGGCTGTGGACAACAACAGGAACAAAGAGTTGATGCTAGCATCAGGAATTATTCCTTTGCTGGAGGAAATGCTCTGTAATCCACATTCCCATGGTTCAGTGACGGCAATTTATCTGAACCTCTCGTGTCTTGAAGAAGCAAAGCCCGTAATAGGTTCGAGTCTGGCAGTTCCTTTCATGGTAAATCTTCTTTGGACCGAGACTGAAGTCCAGTGCAAAGTCGATGCCCTTCACTCCCTTTTTCACCTGTCCACCTACCCTCCCAATATCCCCTGCCTTTTATCTGCTGACCTTGTCAACGCCCTTCAATCACTCACTATCAGTGATGAGCAACGGTGGACAGAAAAGTCCTTAGCTGTTCTACTTAATTTGGTATTGAACGAGGCAGGAAAAGACGAGATGGTTTCAGCACCTAGCCTTGTGAGCAATCTCTGCACCATTCTTGACACGGGTGAACCAAATGAGCAAGAACAAGCTGTTTCTTTGCTTCTGATATTATGCAATCACAGTGAGATCTGTAGCGAGATGGTTTTACAAGAAGGAGTGATACCTTCTTTGGTATCTATCTCCGTAAACGGTACTCAACGTGGAAGAGAAAGGGCACAGAAGCTACTGACACTATTCAGGGAACTGAGGCAAAGGGATCAAACCCATCTCACAGAACCGCAGCATACAGAAGTCACAAGCCCCGAGGACGGATTCTCTGTTGCTTCAGCCGCTGTAACAGAGACAAAACCGCAGTGTAAATCAGCCTCGAGAAAGAAAATGGGAAGAGCATTCAGCTTTCTATGGAAAAGTAAGAGCTTCTCAGTTTACCAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

768

Amino Acids

85.57

Weight (kDa)

5.4

Isoelectric Point (pI)

50.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	280 - 349	5.2e-19	U-box domain
ARM_ARMC5	PF24768	539 - 692	9.2e-06	ARMC5
ARM_PUB	PF25598	560 - 704	8.6e-10	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530
fragaria_vesca	FvH4_4g24030 FvH4_4g24030 FvH4_4g24030
malus_domestica	MD16G1116600.v1.1
prunus_persica	Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1
pyrus_communis	pycom13g10100 pycom16g09990
rosa_chinensis	RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381
rosa_laevigata	RLG00000002065 RLG00000002066 RLG00000006953
rosa_multiflora	Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237030 Rroxscaffold_5G00372450
rosa_rugosa	Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800
rosa_samantha	Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600
rosa_wichuraiana	Rw4G026200 Rw7G029570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1828
AccII	CGCG	1 cut(s)	896
AciI	CCGC	4 cut(s)	836, 2147, 2199, 2219
AclWI	GGATC	5 cut(s)	346, 386, 789, 1429, 2133
AcsI	RAATTY	4 cut(s)	25, 150, 266, 448
AcuI	CTGAAG	5 cut(s)	775, 1394, 1431, 1707, 2178
AcvI	CACGTG	1 cut(s)	175
AfaI	GTAC	2 cut(s)	1270, 2062
AfiI	CCNNNNNNNGG	3 cut(s)	583, 1634, 2177
AflII	CTTAAG	1 cut(s)	1306
AflIII	ACRYGT	2 cut(s)	956, 1147
AjiI	CACGTC	1 cut(s)	1297
AjnI	CCWGG	4 cut(s)	37, 720, 1236, 1367
Alw21I	GWGCWC	1 cut(s)	461
Alw26I	GTCTC	3 cut(s)	1083, 1676, 2204
AlwI	GGATC	5 cut(s)	346, 386, 789, 1429, 2133
AlwNI	CAGNNNCTG	3 cut(s)	798, 1417, 2201
Ama87I	CYCGRG	2 cut(s)	2171, 2236
AoxI	GGCC	3 cut(s)	131, 573, 1365
ApaI	GGGCCC	1 cut(s)	577
ApeKI	GCWGC	7 cut(s)	125, 433, 497, 530, 868, 976, 2149
ApoI	RAATTY	4 cut(s)	25, 150, 266, 448
AspS9I	GGNCC	5 cut(s)	573, 574, 1057, 1067, 1677
AsuHPI	GGTGA	5 cut(s)	53, 702, 962, 1718, 1946
AsuNHI	GCTAGC	1 cut(s)	1519
AvaI	CYCGRG	2 cut(s)	2171, 2236
AvaII	GGWCC	3 cut(s)	1057, 1067, 1677
AxyI	CCTNAGG	1 cut(s)	302
BaeGI	GKGCMC	2 cut(s)	577, 2086
BanII	GRGCYC	2 cut(s)	461, 577
BarI	GAAGNNNNNNTAC	4 cut(s)	505, 537, 2013, 2045
BauI	CACGAG	1 cut(s)	1606
BbrPI	CACGTG	1 cut(s)	175
Bbv12I	GWGCWC	1 cut(s)	461
BbvI	GCAGC	7 cut(s)	112, 420, 484, 542, 880, 988, 2161
BccI	CCATC	7 cut(s)	355, 498, 938, 1058, 1876, 2002, 2142
BceAI	ACGGC	2 cut(s)	1063, 1602
BcgI	CGANNNNNNTGC	2 cut(s)	847, 881
BciT130I	CCWGG	4 cut(s)	39, 722, 1238, 1369
BciVI	GTATCC	1 cut(s)	1294
BcoDI	GTCTC	3 cut(s)	1083, 1676, 2204
BfaI	CTAG	9 cut(s)	129, 222, 504, 509, 525, 1029, 1082, 1520, 1896
BfmI	CTRYAG	2 cut(s)	729, 1999
BfrI	CTTAAG	1 cut(s)	1306
BfuI	GTATCC	1 cut(s)	1294
BglII	AGATCT	3 cut(s)	663, 815, 1995
BisI	GCNGC	8 cut(s)	126, 434, 498, 531, 869, 977, 2150, 2199
BlsI	GCNGC	8 cut(s)	127, 435, 499, 532, 870, 978, 2151, 2200
Bme1390I	CCNGG	4 cut(s)	39, 722, 1238, 1369
Bme18I	GGWCC	3 cut(s)	1057, 1067, 1677
BmeT110I	CYCGRG	2 cut(s)	2171, 2236
BmgBI	CACGTC	1 cut(s)	1297
BmgT120I	GGNCC	5 cut(s)	573, 574, 1057, 1067, 1677
BmiI	GGNNCC	6 cut(s)	575, 1059, 1069, 1185, 1204, 1465
BmrFI	CCNGG	4 cut(s)	39, 722, 1238, 1369
BmsI	GCATC	6 cut(s)	34, 539, 727, 1506, 1532, 1696
BmtI	GCTAGC	1 cut(s)	1523
BoxI	GACNNNNGTC	1 cut(s)	1688
BplI	GAGNNNNNCTC	2 cut(s)	519, 551
BpmI	CTGGAG	1 cut(s)	1565
Bpu10I	CCTNAGC	1 cut(s)	1834
BpuEI	CTTGAG	2 cut(s)	500, 539
BsaAI	YACGTR	1 cut(s)	175
BsaJI	CCNNGG	6 cut(s)	37, 721, 742, 1467, 1573, 2172
BsaXI	ACNNNNNCTCC	2 cut(s)	1726, 1756
Bsc4I	CCNNNNNNNGG	3 cut(s)	583, 1634, 2177
Bse1I	ACTGG	2 cut(s)	1693, 2299
Bse21I	CCTNAGG	1 cut(s)	302
Bse3DI	GCAATG	3 cut(s)	76, 208, 698
BseBI	CCWGG	4 cut(s)	39, 722, 1238, 1369
BseDI	CCNNGG	6 cut(s)	37, 721, 742, 1467, 1573, 2172
BseGI	GGATG	4 cut(s)	10, 592, 676, 1177
BseLI	CCNNNNNNNGG	3 cut(s)	583, 1634, 2177
BseMI	GCAATG	3 cut(s)	76, 208, 698
BseMII	CTCAG	5 cut(s)	356, 767, 1065, 2105, 2304
BseNI	ACTGG	2 cut(s)	1693, 2299
BseRI	GAGGAG	1 cut(s)	1376
BseSI	GKGCMC	2 cut(s)	577, 2086
BseXI	GCAGC	7 cut(s)	112, 420, 484, 542, 880, 988, 2161
BsgI	GTGCAG	1 cut(s)	1900
Bsh1236I	CGCG	1 cut(s)	896
BshFI	GGCC	3 cut(s)	133, 575, 1367
BsiHKAI	GWGCWC	1 cut(s)	461
BsiHKCI	CYCGRG	2 cut(s)	2171, 2236
BslFI	GGGAC	2 cut(s)	945, 1043
BslI	CCNNNNNNNGG	3 cut(s)	583, 1634, 2177
BsmAI	GTCTC	3 cut(s)	1083, 1676, 2204
BsmFI	GGGAC	2 cut(s)	945, 1043
BsmI	GAATGC	1 cut(s)	2258
BsnI	GGCC	3 cut(s)	133, 575, 1367
BsoBI	CYCGRG	2 cut(s)	2171, 2236
Bsp120I	GGGCCC	1 cut(s)	573
Bsp1286I	GDGCHC	3 cut(s)	461, 577, 2086
Bsp19I	CCATGG	3 cut(s)	742, 1467, 1573
BspACI	CCGC	4 cut(s)	836, 2147, 2199, 2219
BspANI	GGCC	3 cut(s)	133, 575, 1367
BspCNI	CTCAG	5 cut(s)	355, 768, 1066, 2106, 2303
BspFNI	CGCG	1 cut(s)	896
BspHI	TCATGA	1 cut(s)	630
BspLI	GGNNCC	6 cut(s)	575, 1059, 1069, 1185, 1204, 1465
BspOI	GCTAGC	1 cut(s)	1523
BspPI	GGATC	5 cut(s)	346, 386, 789, 1429, 2133
BspQI	GCTCTTC	1 cut(s)	2248
BspTI	CTTAAG	1 cut(s)	1306
BsrDI	GCAATG	3 cut(s)	76, 208, 698
BsrI	ACTGG	2 cut(s)	1693, 2299
BssECI	CCNNGG	6 cut(s)	37, 721, 742, 1467, 1573, 2172
BssSI	CACGAG	1 cut(s)	1606
BssT1I	CCWWGG	3 cut(s)	742, 1467, 1573
Bst2BI	CACGAG	1 cut(s)	1606
Bst2UI	CCWGG	4 cut(s)	39, 722, 1238, 1369
Bst4CI	ACNGT	6 cut(s)	330, 761, 1010, 1818, 1991, 2060
Bst6I	CTCTTC	2 cut(s)	2068, 2248
BstAFI	CTTAAG	1 cut(s)	1306
BstAPI	GCANNNNNTGC	1 cut(s)	1914
BstBAI	YACGTR	1 cut(s)	175
BstC8I	GCNNGC	1 cut(s)	1521
BstDEI	CTNAG	7 cut(s)	302, 342, 776, 1074, 1834, 2114, 2290
BstDSI	CCRYGG	3 cut(s)	742, 1467, 1573
BstF5I	GGATG	4 cut(s)	10, 592, 676, 1177
BstFNI	CGCG	1 cut(s)	896
BstMAI	GTCTC	3 cut(s)	1083, 1676, 2204
BstMWI	GCNNNNNNNGC	3 cut(s)	1905, 1914, 2198
BstNI	CCWGG	4 cut(s)	39, 722, 1238, 1369
BstNSI	RCATGY	1 cut(s)	960
BstPAI	GACNNNNGTC	1 cut(s)	1688
BstSCI	CCNGG	4 cut(s)	37, 720, 1236, 1367
BstSFI	CTRYAG	2 cut(s)	729, 1999
BstSLI	GKGCMC	2 cut(s)	577, 2086
BstUI	CGCG	1 cut(s)	896
BstV1I	GCAGC	7 cut(s)	112, 420, 484, 542, 880, 988, 2161
BstX2I	RGATCY	5 cut(s)	338, 663, 794, 815, 1995
BstXI	CCANNNNNNTGG	1 cut(s)	1460
BstYI	RGATCY	5 cut(s)	338, 663, 794, 815, 1995
Bsu36I	CCTNAGG	1 cut(s)	302
BsuI	GTATCC	1 cut(s)	1294
BsuRI	GGCC	3 cut(s)	133, 575, 1367
BtgI	CCRYGG	3 cut(s)	742, 1467, 1573
BtrI	CACGTC	1 cut(s)	1297
BtsCI	GGATG	4 cut(s)	10, 592, 676, 1177
BtsI	GCAGTG	1 cut(s)	2228
BtsIMutI	CAGTG	8 cut(s)	87, 213, 1587, 1700, 1810, 1996, 2228, 2306
Cac8I	GCNNGC	1 cut(s)	1521
CaiI	CAGNNNCTG	3 cut(s)	798, 1417, 2201
CciI	TCATGA	1 cut(s)	630
Cfr13I	GGNCC	5 cut(s)	573, 574, 1057, 1067, 1677
CseI	GACGC	1 cut(s)	885
Csp6I	GTAC	2 cut(s)	1269, 2061
CviAII	CATG	8 cut(s)	100, 631, 743, 957, 1378, 1468, 1574, 1660
CviQI	GTAC	2 cut(s)	1269, 2061
DdeI	CTNAG	7 cut(s)	302, 342, 776, 1074, 1834, 2114, 2290
DrdI	GACNNNNNNGTC	1 cut(s)	1828
DseDI	GACNNNNNNGTC	1 cut(s)	1828
Eam1104I	CTCTTC	2 cut(s)	2068, 2248
EarI	CTCTTC	2 cut(s)	2068, 2248
EciI	GGCGGA	1 cut(s)	825
Ecl136II	GAGCTC	1 cut(s)	459
Eco130I	CCWWGG	3 cut(s)	742, 1467, 1573
Eco24I	GRGCYC	2 cut(s)	461, 577
Eco32I	GATATC	1 cut(s)	861
Eco47I	GGWCC	3 cut(s)	1057, 1067, 1677
Eco53kI	GAGCTC	1 cut(s)	459
Eco57I	CTGAAG	5 cut(s)	775, 1394, 1431, 1707, 2178
Eco72I	CACGTG	1 cut(s)	175
Eco81I	CCTNAGG	1 cut(s)	302
Eco88I	CYCGRG	2 cut(s)	2171, 2236
EcoICRI	GAGCTC	1 cut(s)	459
EcoO109I	RGGNCCY	2 cut(s)	573, 1057
EcoRI	GAATTC	1 cut(s)	150
EcoRII	CCWGG	4 cut(s)	37, 720, 1236, 1367
EcoRV	GATATC	1 cut(s)	861
EcoT14I	CCWWGG	3 cut(s)	742, 1467, 1573
EcoT38I	GRGCYC	2 cut(s)	461, 577
ErhI	CCWWGG	3 cut(s)	742, 1467, 1573
FaeI	CATG	8 cut(s)	103, 634, 746, 960, 1381, 1471, 1577, 1663
FalI	AAGNNNNNCTT	4 cut(s)	1239, 1271, 1392, 1424
FaqI	GGGAC	2 cut(s)	945, 1043
FatI	CATG	8 cut(s)	99, 630, 742, 956, 1377, 1467, 1573, 1659
FauNDI	CATATG	1 cut(s)	910
Fnu4HI	GCNGC	8 cut(s)	126, 434, 498, 531, 869, 977, 2150, 2199
FokI	GGATG	4 cut(s)	17, 599, 683, 1184
FriOI	GRGCYC	2 cut(s)	461, 577
Fsp4HI	GCNGC	8 cut(s)	126, 434, 498, 531, 869, 977, 2150, 2199
FspBI	CTAG	9 cut(s)	129, 222, 504, 509, 525, 1029, 1082, 1520, 1896
GluI	GCNGC	8 cut(s)	126, 434, 498, 531, 869, 977, 2150, 2199
GsuI	CTGGAG	1 cut(s)	1565
HaeIII	GGCC	3 cut(s)	133, 575, 1367
HgaI	GACGC	1 cut(s)	885
Hin1II	CATG	8 cut(s)	103, 634, 746, 960, 1381, 1471, 1577, 1663
HincII	GTYRAC	2 cut(s)	1281, 1780
HindII	GTYRAC	2 cut(s)	1281, 1780
HindIII	AAGCTT	1 cut(s)	156
HphI	GGTGA	5 cut(s)	53, 702, 962, 1718, 1946
Hpy188I	TCNGA	9 cut(s)	466, 656, 794, 858, 1120, 1231, 1431, 1599, 1974
Hpy188III	TCNNGA	9 cut(s)	147, 525, 556, 631, 1082, 1527, 1613, 1925, 2238
Hpy99I	CGWCG	1 cut(s)	118
HpyAV	CCTTC	8 cut(s)	268, 397, 1162, 1171, 1721, 1796, 2015, 2043
HpyCH4III	ACNGT	6 cut(s)	330, 761, 1010, 1818, 1991, 2060
HpyCH4IV	ACGT	4 cut(s)	174, 1147, 1296, 2068
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1905, 1914, 2198
HpyF3I	CTNAG	7 cut(s)	302, 342, 776, 1074, 1834, 2114, 2290
HpySE526I	ACGT	4 cut(s)	174, 1147, 1296, 2068
Hsp92II	CATG	8 cut(s)	103, 634, 746, 960, 1381, 1471, 1577, 1663
LguI	GCTCTTC	1 cut(s)	2248
LmnI	GCTCC	1 cut(s)	1463
Lsp1109I	GCAGC	7 cut(s)	112, 420, 484, 542, 880, 988, 2161
LweI	GCATC	6 cut(s)	34, 539, 727, 1506, 1532, 1696
MaeI	CTAG	9 cut(s)	129, 222, 504, 509, 525, 1029, 1082, 1520, 1896
MaeII	ACGT	4 cut(s)	174, 1147, 1296, 2068
MaeIII	GTNAC	4 cut(s)	1249, 1582, 2161, 2203
MfeI	CAATTG	1 cut(s)	606
MflI	RGATCY	5 cut(s)	338, 663, 794, 815, 1995
MhlI	GDGCHC	3 cut(s)	461, 577, 2086
MlyI	GAGTC	4 cut(s)	991, 1085, 1130, 1651
MmeI	TCCRAC	2 cut(s)	349, 1441
MseI	TTAA	8 cut(s)	9, 786, 1089, 1209, 1289, 1307, 1479, 1848
MslI	CAYNNNNRTG	2 cut(s)	747, 1572
MspA1I	CMGCKG	2 cut(s)	766, 2201
MspCI	CTTAAG	1 cut(s)	1306
MspR9I	CCNGG	4 cut(s)	39, 722, 1238, 1369
MunI	CAATTG	1 cut(s)	606
Mva1269I	GAATGC	1 cut(s)	2258
MvaI	CCWGG	4 cut(s)	39, 722, 1238, 1369
MvnI	CGCG	1 cut(s)	896
MwoI	GCNNNNNNNGC	3 cut(s)	1905, 1914, 2198
NcoI	CCATGG	3 cut(s)	742, 1467, 1573
NdeI	CATATG	1 cut(s)	910
NheI	GCTAGC	1 cut(s)	1519
NlaIII	CATG	8 cut(s)	103, 634, 746, 960, 1381, 1471, 1577, 1663
NlaIV	GGNNCC	6 cut(s)	575, 1059, 1069, 1185, 1204, 1465
NmeAIII	GCCGAG	1 cut(s)	159
NmuCI	GTSAC	2 cut(s)	1582, 2161
NspI	RCATGY	1 cut(s)	960
PaeR7I	CTCGAG	1 cut(s)	2236
PagI	TCATGA	1 cut(s)	630
PciI	ACATGT	1 cut(s)	956
PciSI	GCTCTTC	1 cut(s)	2248
PctI	GAATGC	1 cut(s)	2258
PfeI	GAWTC	8 cut(s)	218, 251, 602, 680, 918, 1226, 1372, 2181
PflFI	GACNNNGTC	2 cut(s)	884, 1775
PkrI	GCNGC	8 cut(s)	127, 435, 499, 532, 870, 978, 2151, 2200
PleI	GAGTC	4 cut(s)	991, 1084, 1129, 1650
PmaCI	CACGTG	1 cut(s)	175
PmlI	CACGTG	1 cut(s)	175
PpsI	GAGTC	4 cut(s)	991, 1084, 1129, 1650
Ppu21I	YACGTR	1 cut(s)	175
PpuMI	RGGWCCY	1 cut(s)	1057
PscI	ACATGT	1 cut(s)	956
PshAI	GACNNNNGTC	1 cut(s)	1688
Psp124BI	GAGCTC	1 cut(s)	461
Psp5II	RGGWCCY	1 cut(s)	1057
Psp6I	CCWGG	4 cut(s)	37, 720, 1236, 1367
PspCI	CACGTG	1 cut(s)	175
PspGI	CCWGG	4 cut(s)	37, 720, 1236, 1367
PspN4I	GGNNCC	6 cut(s)	575, 1059, 1069, 1185, 1204, 1465
PspOMI	GGGCCC	1 cut(s)	573
PspPI	GGNCC	5 cut(s)	573, 574, 1057, 1067, 1677
PspPPI	RGGWCCY	1 cut(s)	1057
PstNI	CAGNNNCTG	3 cut(s)	798, 1417, 2201
PsuI	RGATCY	5 cut(s)	338, 663, 794, 815, 1995
PsyI	GACNNNGTC	2 cut(s)	884, 1775
PvuII	CAGCTG	1 cut(s)	766
RsaI	GTAC	2 cut(s)	1270, 2062
RsaNI	GTAC	2 cut(s)	1269, 2061
RseI	CAYNNNNRTG	2 cut(s)	747, 1572
SacI	GAGCTC	1 cut(s)	461
SapI	GCTCTTC	1 cut(s)	2248
SaqAI	TTAA	8 cut(s)	9, 786, 1089, 1209, 1289, 1307, 1479, 1848
SatI	GCNGC	8 cut(s)	126, 434, 498, 531, 869, 977, 2150, 2199
Sau96I	GGNCC	5 cut(s)	573, 574, 1057, 1067, 1677
SchI	GAGTC	4 cut(s)	991, 1085, 1130, 1651
ScrFI	CCNGG	4 cut(s)	39, 722, 1238, 1369
SduI	GDGCHC	3 cut(s)	461, 577, 2086
SfaNI	GCATC	6 cut(s)	34, 539, 727, 1506, 1532, 1696
SfcI	CTRYAG	2 cut(s)	729, 1999
Sfr274I	CTCGAG	1 cut(s)	2236
SinI	GGWCC	3 cut(s)	1057, 1067, 1677
SlaI	CTCGAG	1 cut(s)	2236
SmiMI	CAYNNNNRTG	2 cut(s)	747, 1572
SmlI	CTYRAG	4 cut(s)	479, 554, 1306, 2236
SmoI	CTYRAG	4 cut(s)	479, 554, 1306, 2236
SsiI	CCGC	4 cut(s)	836, 2147, 2199, 2219
SspMI	CTAG	9 cut(s)	129, 222, 504, 509, 525, 1029, 1082, 1520, 1896
SstI	GAGCTC	1 cut(s)	461
StyD4I	CCNGG	4 cut(s)	37, 720, 1236, 1367
StyI	CCWWGG	3 cut(s)	742, 1467, 1573
TaaI	ACNGT	6 cut(s)	330, 761, 1010, 1818, 1991, 2060
TaiI	ACGT	4 cut(s)	177, 1150, 1299, 2071
TaqI	TCGA	3 cut(s)	1640, 1704, 2237
TaqII	GACCGA	1 cut(s)	1694
TauI	GCSGC	1 cut(s)	2201
TfiI	GAWTC	8 cut(s)	218, 251, 602, 680, 918, 1226, 1372, 2181
Tru1I	TTAA	8 cut(s)	9, 786, 1089, 1209, 1289, 1307, 1479, 1848
Tru9I	TTAA	8 cut(s)	9, 786, 1089, 1209, 1289, 1307, 1479, 1848
TscAI	CASTG	8 cut(s)	87, 220, 1587, 1700, 1810, 1996, 2228, 2306
TseFI	GTSAC	2 cut(s)	1582, 2161
TseI	GCWGC	7 cut(s)	125, 433, 497, 530, 868, 976, 2149
Tsp45I	GTSAC	2 cut(s)	1582, 2161
TspDTI	ATGAA	4 cut(s)	489, 687, 1449, 1648
TspGWI	ACGGA	4 cut(s)	72, 1286, 2041, 2193
TspRI	CASTG	8 cut(s)	87, 220, 1587, 1700, 1810, 1996, 2228, 2306
Tth111I	GACNNNGTC	2 cut(s)	884, 1775
Vha464I	CTTAAG	1 cut(s)	1306
VpaK11BI	GGWCC	3 cut(s)	1057, 1067, 1677
XapI	RAATTY	4 cut(s)	25, 150, 266, 448
XbaI	TCTAGA	2 cut(s)	524, 1081
XceI	RCATGY	1 cut(s)	960
XcmI	CCANNNNNNNNNTGG	2 cut(s)	332, 1375
XhoI	CTCGAG	1 cut(s)	2236
XspI	CTAG	9 cut(s)	129, 222, 504, 509, 525, 1029, 1082, 1520, 1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.