RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530 |
| fragaria_vesca | FvH4_4g24030 FvH4_4g24030 FvH4_4g24030 |
| malus_domestica | MD16G1116600.v1.1 |
| prunus_persica | Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 |
| pyrus_communis | pycom13g10100 pycom16g09990 |
| rosa_chinensis | RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381 |
| rosa_laevigata | RLG00000002065 RLG00000002066 RLG00000006953 |
| rosa_multiflora | Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00237030 Rroxscaffold_5G00372450 |
| rosa_rugosa | Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800 |
| rosa_samantha | Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600 |
| rosa_wichuraiana | Rw4G026200 Rw7G029570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 218 |
| AciI | CCGC | 2 cut(s) | 216, 233 |
| AclWI | GGATC | 1 cut(s) | 237 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AluBI | AGCT | 3 cut(s) | 110, 118, 273 |
| AluI | AGCT | 3 cut(s) | 110, 118, 273 |
| Alw26I | GTCTC | 2 cut(s) | 138, 147 |
| AlwI | GGATC | 1 cut(s) | 237 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 118 |
| AspS9I | GGNCC | 1 cut(s) | 37 |
| AsuHPI | GGTGA | 1 cut(s) | 153 |
| AvaII | GGWCC | 1 cut(s) | 37 |
| BccI | CCATC | 3 cut(s) | 28, 254, 256 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 51, 85 |
| BcoDI | GTCTC | 2 cut(s) | 138, 147 |
| BfmI | CTRYAG | 1 cut(s) | 41 |
| BisI | GCNGC | 1 cut(s) | 233 |
| BlsI | GCNGC | 1 cut(s) | 234 |
| Bme18I | GGWCC | 1 cut(s) | 37 |
| BmgT120I | GGNCC | 1 cut(s) | 37 |
| BpmI | CTGGAG | 2 cut(s) | 150, 204 |
| BpuEI | CTTGAG | 1 cut(s) | 235 |
| BsaI | GGTCTC | 1 cut(s) | 147 |
| BseMII | CTCAG | 1 cut(s) | 125 |
| BseRI | GAGGAG | 1 cut(s) | 185 |
| BsmAI | GTCTC | 2 cut(s) | 138, 147 |
| Bso31I | GGTCTC | 1 cut(s) | 147 |
| Bsp143I | GATC | 1 cut(s) | 242 |
| BspACI | CCGC | 2 cut(s) | 216, 233 |
| BspCNI | CTCAG | 1 cut(s) | 124 |
| BspMAI | CTGCAG | 1 cut(s) | 45 |
| BspPI | GGATC | 1 cut(s) | 237 |
| BspTNI | GGTCTC | 1 cut(s) | 147 |
| BsrBI | CCGCTC | 1 cut(s) | 218 |
| BssMI | GATC | 1 cut(s) | 242 |
| BstDEI | CTNAG | 1 cut(s) | 111 |
| BstKTI | GATC | 1 cut(s) | 245 |
| BstMAI | GTCTC | 2 cut(s) | 138, 147 |
| BstMBI | GATC | 1 cut(s) | 242 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 124 |
| BstSFI | CTRYAG | 1 cut(s) | 41 |
| BstX2I | RGATCY | 1 cut(s) | 242 |
| BstYI | RGATCY | 1 cut(s) | 242 |
| CaiI | CAGNNNCTG | 1 cut(s) | 118 |
| Cfr13I | GGNCC | 1 cut(s) | 37 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CviJI | RGCY | 4 cut(s) | 110, 118, 232, 273 |
| CviKI_1 | RGCY | 4 cut(s) | 110, 118, 232, 273 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 1 cut(s) | 111 |
| DpnI | GATC | 1 cut(s) | 244 |
| DpnII | GATC | 1 cut(s) | 242 |
| Eco31I | GGTCTC | 1 cut(s) | 147 |
| Eco47I | GGWCC | 1 cut(s) | 37 |
| FaiI | YATR | 2 cut(s) | 212, 238 |
| FauI | CCCGC | 1 cut(s) | 223 |
| Fnu4HI | GCNGC | 1 cut(s) | 233 |
| Fsp4HI | GCNGC | 1 cut(s) | 233 |
| GluI | GCNGC | 1 cut(s) | 233 |
| GsuI | CTGGAG | 2 cut(s) | 150, 204 |
| HindIII | AAGCTT | 1 cut(s) | 271 |
| HinfI | GANTC | 1 cut(s) | 224 |
| HphI | GGTGA | 1 cut(s) | 153 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 114 |
| Hpy188III | TCNNGA | 5 cut(s) | 93, 134, 167, 221, 252 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 4 cut(s) | 27, 43, 62, 240 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 111 |
| Kzo9I | GATC | 1 cut(s) | 242 |
| LmnI | GCTCC | 1 cut(s) | 223 |
| LpnPI | CCDG | 5 cut(s) | 29, 53, 72, 180, 234 |
| MalI | GATC | 1 cut(s) | 244 |
| MbiI | CCGCTC | 1 cut(s) | 218 |
| MboI | GATC | 1 cut(s) | 242 |
| MboII | GAAGA | 1 cut(s) | 267 |
| MflI | RGATCY | 1 cut(s) | 242 |
| MluCI | AATT | 1 cut(s) | 54 |
| MnlI | CCTC | 3 cut(s) | 89, 163, 174 |
| MseI | TTAA | 2 cut(s) | 81, 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 124 |
| NdeII | GATC | 1 cut(s) | 242 |
| PfeI | GAWTC | 1 cut(s) | 224 |
| PkrI | GCNGC | 1 cut(s) | 234 |
| PspPI | GGNCC | 1 cut(s) | 37 |
| PstI | CTGCAG | 1 cut(s) | 45 |
| PstNI | CAGNNNCTG | 1 cut(s) | 118 |
| PsuI | RGATCY | 1 cut(s) | 242 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| SaqAI | TTAA | 2 cut(s) | 81, 122 |
| SatI | GCNGC | 1 cut(s) | 233 |
| Sau3AI | GATC | 1 cut(s) | 242 |
| Sau96I | GGNCC | 1 cut(s) | 37 |
| SbfI | CCTGCAGG | 1 cut(s) | 45 |
| SdaI | CCTGCAGG | 1 cut(s) | 45 |
| SetI | ASST | 5 cut(s) | 112, 120, 166, 180, 275 |
| SfcI | CTRYAG | 1 cut(s) | 41 |
| SgeI | CNNG | 9 cut(s) | 52, 56, 71, 105, 146, 179, 227, 233, 264 |
| SinI | GGWCC | 1 cut(s) | 37 |
| SmlI | CTYRAG | 1 cut(s) | 250 |
| SmoI | CTYRAG | 1 cut(s) | 250 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 45 |
| Sse9I | AATT | 1 cut(s) | 54 |
| SsiI | CCGC | 2 cut(s) | 216, 233 |
| TaqI | TCGA | 1 cut(s) | 71 |
| TasI | AATT | 1 cut(s) | 54 |
| TauI | GCSGC | 1 cut(s) | 235 |
| TfiI | GAWTC | 1 cut(s) | 224 |
| Tru1I | TTAA | 2 cut(s) | 81, 122 |
| Tru9I | TTAA | 2 cut(s) | 81, 122 |
| TspGWI | ACGGA | 1 cut(s) | 67 |
| VpaK11BI | GGWCC | 1 cut(s) | 37 |