RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530 |
| fragaria_vesca | FvH4_4g24030 FvH4_4g24030 FvH4_4g24030 |
| malus_domestica | MD16G1116600.v1.1 |
| prunus_persica | Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 |
| pyrus_communis | pycom13g10100 pycom16g09990 |
| rosa_chinensis | RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381 |
| rosa_laevigata | RLG00000002065 RLG00000002066 RLG00000006953 |
| rosa_multiflora | Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00237030 Rroxscaffold_5G00372450 |
| rosa_rugosa | Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800 |
| rosa_samantha | Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600 |
| rosa_wichuraiana | Rw4G026200 Rw7G029570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 311 |
| AccIII | TCCGGA | 1 cut(s) | 259 |
| AciI | CCGC | 2 cut(s) | 136, 309 |
| AfaI | GTAC | 1 cut(s) | 273 |
| AgsI | TTSAA | 1 cut(s) | 9 |
| AluBI | AGCT | 5 cut(s) | 19, 77, 203, 211, 363 |
| AluI | AGCT | 5 cut(s) | 19, 77, 203, 211, 363 |
| Alw26I | GTCTC | 5 cut(s) | 85, 92, 231, 240, 344 |
| Aor13HI | TCCGGA | 1 cut(s) | 259 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| AseI | ATTAAT | 1 cut(s) | 215 |
| AspS9I | GGNCC | 1 cut(s) | 130 |
| AsuHPI | GGTGA | 1 cut(s) | 246 |
| AvaII | GGWCC | 1 cut(s) | 130 |
| BbvI | GCAGC | 1 cut(s) | 47 |
| BccI | CCATC | 2 cut(s) | 121, 347 |
| BcoDI | GTCTC | 5 cut(s) | 85, 92, 231, 240, 344 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| Bme18I | GGWCC | 1 cut(s) | 130 |
| BmgT120I | GGNCC | 1 cut(s) | 130 |
| BpmI | CTGGAG | 2 cut(s) | 65, 297 |
| BpuEI | CTTGAG | 1 cut(s) | 326 |
| BsaI | GGTCTC | 1 cut(s) | 240 |
| BsaWI | WCCGGW | 1 cut(s) | 259 |
| BseAI | TCCGGA | 1 cut(s) | 259 |
| BseMII | CTCAG | 1 cut(s) | 218 |
| BseRI | GAGGAG | 1 cut(s) | 278 |
| BseXI | GCAGC | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 260 |
| BsmAI | GTCTC | 5 cut(s) | 85, 92, 231, 240, 344 |
| BsmBI | CGTCTC | 1 cut(s) | 344 |
| Bso31I | GGTCTC | 1 cut(s) | 240 |
| Bsp13I | TCCGGA | 1 cut(s) | 259 |
| BspACI | CCGC | 2 cut(s) | 136, 309 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspEI | TCCGGA | 1 cut(s) | 259 |
| BspTNI | GGTCTC | 1 cut(s) | 240 |
| BsrBI | CCGCTC | 1 cut(s) | 311 |
| BstC8I | GCNNGC | 1 cut(s) | 75 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstMAI | GTCTC | 5 cut(s) | 85, 92, 231, 240, 344 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 35, 217 |
| BstV1I | GCAGC | 1 cut(s) | 47 |
| BtsIMutI | CAGTG | 1 cut(s) | 31 |
| Cac8I | GCNNGC | 1 cut(s) | 75 |
| Cfr13I | GGNCC | 1 cut(s) | 130 |
| Csp6I | GTAC | 1 cut(s) | 272 |
| CviAII | CATG | 1 cut(s) | 84 |
| CviJI | RGCY | 7 cut(s) | 19, 50, 77, 203, 211, 325, 363 |
| CviKI_1 | RGCY | 7 cut(s) | 19, 50, 77, 203, 211, 325, 363 |
| CviQI | GTAC | 1 cut(s) | 272 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| Eco31I | GGTCTC | 1 cut(s) | 240 |
| Eco47I | GGWCC | 1 cut(s) | 130 |
| Esp3I | CGTCTC | 1 cut(s) | 344 |
| FaeI | CATG | 1 cut(s) | 87 |
| FaiI | YATR | 4 cut(s) | 85, 95, 305, 329 |
| FatI | CATG | 1 cut(s) | 83 |
| FauI | CCCGC | 2 cut(s) | 129, 316 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 36 |
| GsuI | CTGGAG | 2 cut(s) | 65, 297 |
| HapII | CCGG | 1 cut(s) | 260 |
| Hin1II | CATG | 1 cut(s) | 87 |
| HindIII | AAGCTT | 2 cut(s) | 17, 361 |
| HinfI | GANTC | 1 cut(s) | 317 |
| HpaII | CCGG | 1 cut(s) | 260 |
| HphI | GGTGA | 1 cut(s) | 246 |
| Hpy188I | TCNGA | 2 cut(s) | 126, 207 |
| Hpy188III | TCNNGA | 5 cut(s) | 44, 186, 260, 314, 343 |
| HpyAV | CCTTC | 2 cut(s) | 134, 262 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 120, 155, 331 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 35, 217 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Hsp92II | CATG | 1 cut(s) | 87 |
| Kpn2I | TCCGGA | 1 cut(s) | 259 |
| LmnI | GCTCC | 2 cut(s) | 70, 316 |
| LpnPI | CCDG | 6 cut(s) | 29, 53, 146, 165, 273, 327 |
| Lsp1109I | GCAGC | 1 cut(s) | 47 |
| MbiI | CCGCTC | 1 cut(s) | 311 |
| MboII | GAAGA | 1 cut(s) | 358 |
| MluCI | AATT | 1 cut(s) | 147 |
| MnlI | CCTC | 4 cut(s) | 40, 182, 256, 267 |
| MroI | TCCGGA | 1 cut(s) | 259 |
| MseI | TTAA | 2 cut(s) | 174, 215 |
| MspI | CCGG | 1 cut(s) | 260 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 35, 217 |
| NlaIII | CATG | 1 cut(s) | 87 |
| PfeI | GAWTC | 1 cut(s) | 317 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PshBI | ATTAAT | 1 cut(s) | 215 |
| PspPI | GGNCC | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 273 |
| RsaNI | GTAC | 1 cut(s) | 272 |
| SaqAI | TTAA | 2 cut(s) | 174, 215 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau96I | GGNCC | 1 cut(s) | 130 |
| SetI | ASST | 7 cut(s) | 21, 79, 205, 213, 259, 273, 365 |
| SinI | GGWCC | 1 cut(s) | 130 |
| SmlI | CTYRAG | 1 cut(s) | 341 |
| SmoI | CTYRAG | 1 cut(s) | 341 |
| Sse9I | AATT | 1 cut(s) | 147 |
| SsiI | CCGC | 2 cut(s) | 136, 309 |
| TasI | AATT | 1 cut(s) | 147 |
| TfiI | GAWTC | 1 cut(s) | 317 |
| Tru1I | TTAA | 2 cut(s) | 174, 215 |
| Tru9I | TTAA | 2 cut(s) | 174, 215 |
| TscAI | CASTG | 1 cut(s) | 31 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspGWI | ACGGA | 2 cut(s) | 160, 326 |
| TspRI | CASTG | 1 cut(s) | 31 |
| VpaK11BI | GGWCC | 1 cut(s) | 130 |
| VspI | ATTAAT | 1 cut(s) | 215 |