Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001789

Physical Location & Seq

Genomic Coordinates Reverse (-)

6754638 .. 6757926

Gene Structure 3289 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g10100.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGATATTACTGAGGTTGAAGAAAGCTTATTCGCGGCCAGCGATGCCAAGTTGCATGGAGAGCTGTGCAAGGCACTCTCTGCAATTTATTGCAAAATAACGTCGATATTTCCTTCTTTGGAAGCAGCTCGACCTAGGAGCAAGTCTGGTATCCAAGCTTTATGTTCGTTGCATGTGGCACTTGAAAAGGCTAAGAATGTTCTTCAGCATTGCTCAGAATGTAGTAAACTTTACTTGGCTATAACTGGGGATTCTGTGCTCTCAAAGTTTGAGAAGGCAAGATGTGCTCTCATGGATAGTCTTAGGCGTGTTGAAGACATTGTTCCACAATCTATTGGTTGTCAGATTGAAGAGATTGTTAGTGAACTTGAGGGTACTGTGCTCTCACTTGATCCCTTAGAGAAGAAAGTTGGCGATGAAATAATTGCACTACTCCAGCAAGGGAAAAAGTTCGACAATTGTAATGACAATAATGAGCTGGAATCTTTTCATCAGGCTGCTATCAAACTTGGTATTACCTCTTCCAGGGCAGCTCTTACTGAGAGAAGAGCTTTAAAGAAAGTCATCCAAAGAGCCCGTGCTGAGGAAGATAAGCGGAAAGAGTCAATTGTGGCTTATTTATTACATCTTATGCGAAAATACTCCAAGCTGTTTAGAAGTGAAATCTCAGATGACAATGATTCACAAGGTTCTGCTCCTTGTTCTCCCACTATTCAGGGTTCCATTGAGGATGCTGGGCCCGGTGGCAATGTTCAGGCATTTGATCGACAACTGTCAAAACTTAGTTCTTTTAATTTCAAAAGTTCTTTTAATTCCAAGCCATACAATCGGAAATCAGGTCAGATGCCTCTTCCACCTGAAGAATTGAGGTGTCCGATATCTTTGCAGCTTATGTATGATCCGGTCATCATCGCTTCTGGTCAGACATATGAAAGAATTTGCATTGAGAAATGGTTCGGTGATGGGCACAATACCTGCCCAAAGACTCAACAGAAGCTGTCTCATCTTTTTTTAACTCCCAATTATTGTGTCAAAGGTCTCATTGCTAGTTGGTGTGAACAGAATGGAATTTGTGTTCCTGATGGTCCCCCAGAGTCTCTTGACCTCAACTATTGGAGGCTTGCATTTGAGTCTGAGTCCACTGATTCAAAATCTATGGGTAATGTTGGCTCTTGCAAGGTGAAGGGTGTCAAGGTGGTTCCTTTAGAGGAGAGCCATACTATAAAGGAGGACGTTGGAAATGAAACAGAAGATGTGTCTCCATTAGAGGAAGAGTCGGAGCTTGATGTTTTCGAAAGTTATCAGGATCTTTTAACCACCTTGAATGAAGAGGAAGACTTCAGGAAGAGGTGCGAGGTAGTGGAGCAAATAAGGCTCTTGCTGAAGGAGGATGAGGAGGCCAGGATGTATATGGGTGCTAATGGATTTGTTGAAGCACTTCTACATTTTCTGAGCTCAGCTTTGCGTGAAGCGGGTTGTTTGGCTCAGGAAAGTGGAGCCATGGCTCTCTTCAATCTTGCTGTCAACAATAACAGAAACAAGGAAGCAATGTTAGCATCAGGGGTAATTTCGTTGCTGGAGGAAATGATCTCCAATCCCAATTCTCATGGACCTGCAACAGCGCTCTATTTGAATCTCTCGTGCCTCAAAGAAGCCAAGCCTATAATTGGAACAAGCCCTGCTGTCCCTTACTTGACCCAGCTCCTTCAAGCGAATGTTGAAACCCAATGCAAGCTTGATGCCCTCCATGCCCTGTACAATCTATCGAGTGTCCCGTCAAATATTCCTAAACTTATGTCAGCTGGTATTATCAGTGGTCTCCAATCCCTTCTTGCGGACTCTGGCGATCAGATGTGGACAGAAAAATGTGTAGCTGTATTGATAAATTTGGGTTCAAGTAGTTCTGCCAGAGATGAAATGATGTCGAATTCGAGACTTGTAAGTGCACTAGCAACAATTTTGGAGGCCGATCAACCCATTGAGCAGGAGCAAGCTGTCTCATGTCTCTATATGTTGTGTAACGGGAGCGAGAAATGTAGTCAGATGGTCCTGAAGGAAGGAGTGATACCGGCGTTGGTGTCTATTTCCGTTAATGGCACATCAACAGGAAAAGAGAAGGCTCAAAAGCTGTTAATGCTGTTCCGTGAGCAGAGACAGAGAGACCAACCACCTCCTGAGGCGGAGGTGCATCTGTCTGTTGAAAAGAGTGACAACCCCATGAGCGCACCGGAACCAAAGCCGCTATGCAAATCCTTCTCAAGAAGAAAGATGAGCAAACCATTTAGGTTTTTATGGAAGAGCAAAAGCTATTCTGTTTACCAGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

776

Amino Acids

85.63

Weight (kDa)

5.4

Isoelectric Point (pI)

49.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530
fragaria_vesca	FvH4_4g24030 FvH4_4g24030 FvH4_4g24030
malus_domestica	MD16G1116600.v1.1
prunus_persica	Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1
pyrus_communis	pycom13g10100 pycom16g09990
rosa_chinensis	RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381
rosa_laevigata	RLG00000002065 RLG00000002066 RLG00000006953
rosa_multiflora	Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237030 Rroxscaffold_5G00372450
rosa_rugosa	Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800
rosa_samantha	Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600
rosa_wichuraiana	Rw4G026200 Rw7G029570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	983, 1621
AccII	CGCG	1 cut(s)	35
AciI	CCGC	6 cut(s)	35, 595, 1472, 1835, 2180, 2240
AclWI	GGATC	3 cut(s)	386, 893, 1314
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	4 cut(s)	936, 1068, 1885, 1927
AcuI	CTGAAG	5 cut(s)	188, 879, 1324, 1403, 2072
AfaI	GTAC	2 cut(s)	376, 1757
AfeI	AGCGCT	1 cut(s)	1623
AfiI	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
AjnI	CCWGG	2 cut(s)	524, 1400
AloI	GAACNNNNNNTCC	2 cut(s)	1059, 1091
Alw21I	GWGCWC	5 cut(s)	261, 289, 384, 1457, 1948
Alw44I	GTGCAC	1 cut(s)	1944
AlwI	GGATC	3 cut(s)	386, 893, 1314
AlwNI	CAGNNNCTG	1 cut(s)	997
Aor51HI	AGCGCT	1 cut(s)	1623
AoxI	GGCC	4 cut(s)	36, 737, 1398, 1965
ApaI	GGGCCC	1 cut(s)	741
ApaLI	GTGCAC	1 cut(s)	1944
ApeKI	GCWGC	4 cut(s)	125, 497, 530, 886
ApoI	RAATTY	4 cut(s)	936, 1068, 1885, 1927
Asp700I	GAANNNNTTC	4 cut(s)	449, 486, 953, 1437
AspA2I	CCTAGG	1 cut(s)	134
AspLEI	GCGC	2 cut(s)	1624, 2225
AspS9I	GGNCC	5 cut(s)	737, 738, 1085, 1610, 2047
AsuC2I	CCSGG	1 cut(s)	741
AsuHPI	GGTGA	2 cut(s)	971, 1192
AsuII	TTCGAA	1 cut(s)	1293
AvaII	GGWCC	3 cut(s)	1085, 1610, 2047
AvrII	CCTAGG	1 cut(s)	134
AxyI	CCTNAGG	1 cut(s)	2175
BaeGI	GKGCMC	3 cut(s)	741, 969, 1948
BaeI	ACNNNNGTAYC	2 cut(s)	2057, 2090
BanII	GRGCYC	3 cut(s)	577, 741, 1457
BarI	GAAGNNNNNNTAC	6 cut(s)	505, 537, 1425, 1457, 2049, 2081
BauI	CACGAG	1 cut(s)	1639
BbsI	GAAGAC	2 cut(s)	321, 1341
Bbv12I	GWGCWC	5 cut(s)	261, 289, 384, 1457, 1948
BbvCI	CCTCAGC	1 cut(s)	582
BbvI	GCAGC	4 cut(s)	137, 484, 542, 898
BccI	CCATC	3 cut(s)	956, 1076, 2038
BcgI	CGANNNNNNTGC	2 cut(s)	865, 899
BciT130I	CCWGG	2 cut(s)	526, 1402
BciVI	GTATCC	1 cut(s)	161
BcnI	CCSGG	1 cut(s)	741
BfaI	CTAG	3 cut(s)	135, 1047, 1949
BfoI	RGCGCY	1 cut(s)	1625
BfuAI	ACCTGC	2 cut(s)	983, 1621
BfuI	GTATCC	1 cut(s)	161
BisI	GCNGC	6 cut(s)	36, 126, 498, 531, 887, 2240
BlnI	CCTAGG	1 cut(s)	134
BlpI	GCTNAGC	1 cut(s)	1456
BlsI	GCNGC	6 cut(s)	37, 127, 499, 532, 888, 2241
Bme1390I	CCNGG	3 cut(s)	526, 741, 1402
Bme18I	GGWCC	3 cut(s)	1085, 1610, 2047
BmgT120I	GGNCC	5 cut(s)	737, 738, 1085, 1610, 2047
BmiI	GGNNCC	6 cut(s)	721, 739, 1087, 1200, 1498, 2232
BmrFI	CCNGG	3 cut(s)	526, 741, 1402
BmrI	ACTGGG	1 cut(s)	255
BmsI	GCATC	6 cut(s)	34, 721, 834, 1565, 1729, 2197
BmuI	ACTGGG	1 cut(s)	255
BoxI	GACNNNNGTC	1 cut(s)	772
BpiI	GAAGAC	2 cut(s)	321, 1341
BpmI	CTGGAG	2 cut(s)	419, 1598
Bpu10I	CCTNAGC	2 cut(s)	582, 1485
Bpu1102I	GCTNAGC	1 cut(s)	1456
Bpu14I	TTCGAA	1 cut(s)	1293
BpuEI	CTTGAG	2 cut(s)	389, 2242
BpuMI	CCSGG	1 cut(s)	741
BsaI	GGTCTC	3 cut(s)	1043, 1823, 2154
BsaJI	CCNNGG	3 cut(s)	134, 525, 1500
BsaWI	WCCGGW	2 cut(s)	901, 2227
Bsc4I	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
Bse118I	RCCGGY	1 cut(s)	2068
Bse1I	ACTGG	2 cut(s)	250, 2320
Bse21I	CCTNAGG	1 cut(s)	2175
Bse3DI	GCAATG	4 cut(s)	208, 754, 1041, 1554
BseBI	CCWGG	2 cut(s)	526, 1402
BseDI	CCNNGG	3 cut(s)	134, 525, 1500
BseGI	GGATG	4 cut(s)	564, 736, 1396, 1410
BseLI	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
BseMI	GCAATG	4 cut(s)	208, 754, 1041, 1554
BseMII	CTCAG	9 cut(s)	228, 531, 573, 681, 1125, 1442, 1470, 1499, 2166
BseNI	ACTGG	2 cut(s)	250, 2320
BseRI	GAGGAG	2 cut(s)	1223, 1409
BseSI	GKGCMC	3 cut(s)	741, 969, 1948
BseXI	GCAGC	4 cut(s)	137, 484, 542, 898
BseYI	CCCAGC	2 cut(s)	734, 1698
Bsh1236I	CGCG	1 cut(s)	35
BshFI	GGCC	4 cut(s)	38, 739, 1400, 1967
BsiHKAI	GWGCWC	5 cut(s)	261, 289, 384, 1457, 1948
BsiSI	CCGG	4 cut(s)	741, 902, 2069, 2228
BslFI	GGGAC	3 cut(s)	1071, 1670, 1757
BslI	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
BsmFI	GGGAC	3 cut(s)	1071, 1670, 1757
BsnI	GGCC	4 cut(s)	38, 739, 1400, 1967
Bso31I	GGTCTC	3 cut(s)	1043, 1823, 2154
Bsp119I	TTCGAA	1 cut(s)	1293
Bsp120I	GGGCCC	1 cut(s)	737
Bsp1286I	GDGCHC	8 cut(s)	261, 289, 384, 577, 741, 969, 1457, 1948
Bsp1407I	TGTACA	1 cut(s)	1755
Bsp143I	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
Bsp1720I	GCTNAGC	1 cut(s)	1456
Bsp19I	CCATGG	1 cut(s)	1500
BspACI	CCGC	6 cut(s)	35, 595, 1472, 1835, 2180, 2240
BspANI	GGCC	4 cut(s)	38, 739, 1400, 1967
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	6 cut(s)	721, 739, 1087, 1200, 1498, 2232
BspMI	ACCTGC	2 cut(s)	983, 1621
BspPI	GGATC	3 cut(s)	386, 893, 1314
BspQI	GCTCTTC	2 cut(s)	541, 2291
BspT104I	TTCGAA	1 cut(s)	1293
BspTNI	GGTCTC	3 cut(s)	1043, 1823, 2154
BsrDI	GCAATG	4 cut(s)	208, 754, 1041, 1554
BsrFI	RCCGGY	1 cut(s)	2068
BsrGI	TGTACA	1 cut(s)	1755
BsrI	ACTGG	2 cut(s)	250, 2320
BssAI	RCCGGY	1 cut(s)	2068
BssECI	CCNNGG	3 cut(s)	134, 525, 1500
BssMI	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
BssSI	CACGAG	1 cut(s)	1639
BssT1I	CCWWGG	2 cut(s)	134, 1500
Bst2BI	CACGAG	1 cut(s)	1639
Bst2UI	CCWGG	2 cut(s)	526, 1402
Bst4CI	ACNGT	2 cut(s)	379, 774
Bst6I	CTCTTC	9 cut(s)	345, 526, 541, 855, 1266, 1323, 1340, 1514, 2291
BstAPI	GCANNNNNTGC	2 cut(s)	80, 284
BstAUI	TGTACA	1 cut(s)	1755
BstBI	TTCGAA	1 cut(s)	1293
BstC8I	GCNNGC	4 cut(s)	40, 1122, 1733, 1992
BstDSI	CCRYGG	1 cut(s)	1500
BstENI	CCTNNNNNAGG	1 cut(s)	523
BstF5I	GGATG	4 cut(s)	564, 736, 1396, 1410
BstFNI	CGCG	1 cut(s)	35
BstH2I	RGCGCY	1 cut(s)	1625
BstHHI	GCGC	2 cut(s)	1624, 2225
BstKTI	GATC	7 cut(s)	394, 766, 901, 1309, 1590, 1849, 1972
BstMBI	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 61, 80, 284, 1372, 1553, 1748, 2134
BstNI	CCWGG	2 cut(s)	526, 1402
BstNSI	RCATGY	1 cut(s)	176
BstPAI	GACNNNNGTC	1 cut(s)	772
BstSCI	CCNGG	3 cut(s)	524, 739, 1400
BstSLI	GKGCMC	3 cut(s)	741, 969, 1948
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	4 cut(s)	137, 484, 542, 898
BstV2I	GAAGAC	2 cut(s)	321, 1341
BstX2I	RGATCY	1 cut(s)	1306
BstYI	RGATCY	1 cut(s)	1306
Bsu36I	CCTNAGG	1 cut(s)	2175
BsuI	GTATCC	1 cut(s)	161
BsuRI	GGCC	4 cut(s)	38, 739, 1400, 1967
BtgI	CCRYGG	1 cut(s)	1500
BtgZI	GCGATG	3 cut(s)	57, 429, 895
BtsCI	GGATG	4 cut(s)	564, 736, 1396, 1410
BtsIMutI	CAGTG	3 cut(s)	1140, 1819, 2327
BveI	ACCTGC	2 cut(s)	983, 1621
Cac8I	GCNNGC	4 cut(s)	40, 1122, 1733, 1992
CaiI	CAGNNNCTG	1 cut(s)	997
CfoI	GCGC	2 cut(s)	1624, 2225
Cfr10I	RCCGGY	1 cut(s)	2068
Cfr13I	GGNCC	5 cut(s)	737, 738, 1085, 1610, 2047
Csp6I	GTAC	2 cut(s)	375, 1756
CviAII	CATG	8 cut(s)	56, 173, 292, 1501, 1607, 1748, 2001, 2218
CviQI	GTAC	2 cut(s)	375, 1756
DpnI	GATC	7 cut(s)	393, 765, 900, 1308, 1589, 1848, 1971
DpnII	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
DraI	TTTAAA	1 cut(s)	555
EaeI	YGGCCR	1 cut(s)	36
Eam1104I	CTCTTC	9 cut(s)	345, 526, 541, 855, 1266, 1323, 1340, 1514, 2291
EarI	CTCTTC	9 cut(s)	345, 526, 541, 855, 1266, 1323, 1340, 1514, 2291
EciI	GGCGGA	1 cut(s)	2195
Ecl136II	GAGCTC	1 cut(s)	1455
Eco130I	CCWWGG	2 cut(s)	134, 1500
Eco24I	GRGCYC	3 cut(s)	577, 741, 1457
Eco31I	GGTCTC	3 cut(s)	1043, 1823, 2154
Eco32I	GATATC	1 cut(s)	879
Eco47I	GGWCC	3 cut(s)	1085, 1610, 2047
Eco47III	AGCGCT	1 cut(s)	1623
Eco53kI	GAGCTC	1 cut(s)	1455
Eco57I	CTGAAG	5 cut(s)	188, 879, 1324, 1403, 2072
Eco81I	CCTNAGG	1 cut(s)	2175
EcoICRI	GAGCTC	1 cut(s)	1455
EcoNI	CCTNNNNNAGG	1 cut(s)	523
EcoRI	GAATTC	1 cut(s)	1927
EcoRII	CCWGG	2 cut(s)	524, 1400
EcoRV	GATATC	1 cut(s)	879
EcoT14I	CCWWGG	2 cut(s)	134, 1500
EcoT38I	GRGCYC	3 cut(s)	577, 741, 1457
ErhI	CCWWGG	2 cut(s)	134, 1500
FaeI	CATG	8 cut(s)	59, 176, 295, 1504, 1610, 1751, 2004, 2221
FaqI	GGGAC	3 cut(s)	1071, 1670, 1757
FatI	CATG	8 cut(s)	55, 172, 291, 1500, 1606, 1747, 2000, 2217
FauI	CCCGC	1 cut(s)	1465
FauNDI	CATATG	1 cut(s)	928
Fnu4HI	GCNGC	6 cut(s)	36, 126, 498, 531, 887, 2240
FokI	GGATG	4 cut(s)	551, 743, 1403, 1417
FriOI	GRGCYC	3 cut(s)	577, 741, 1457
Fsp4HI	GCNGC	6 cut(s)	36, 126, 498, 531, 887, 2240
FspBI	CTAG	3 cut(s)	135, 1047, 1949
GlaI	GCGC	2 cut(s)	1623, 2224
GluI	GCNGC	6 cut(s)	36, 126, 498, 531, 887, 2240
GsaI	CCCAGC	2 cut(s)	738, 1702
GsuI	CTGGAG	2 cut(s)	419, 1598
HaeII	RGCGCY	1 cut(s)	1625
HaeIII	GGCC	4 cut(s)	38, 739, 1400, 1967
HapII	CCGG	4 cut(s)	741, 902, 2069, 2228
HhaI	GCGC	2 cut(s)	1624, 2225
Hin1II	CATG	8 cut(s)	59, 176, 295, 1504, 1610, 1751, 2004, 2221
Hin6I	GCGC	2 cut(s)	1622, 2223
HinP1I	GCGC	2 cut(s)	1622, 2223
HincII	GTYRAC	1 cut(s)	1525
HindII	GTYRAC	1 cut(s)	1525
HindIII	AAGCTT	3 cut(s)	25, 156, 1733
HpaII	CCGG	4 cut(s)	741, 902, 2069, 2228
HphI	GGTGA	2 cut(s)	971, 1192
Hpy166II	GTNNAC	8 cut(s)	227, 365, 1058, 1140, 1525, 1857, 1946, 2317
Hpy188III	TCNNGA	9 cut(s)	1079, 1100, 1304, 1342, 1487, 1932, 2050, 2174, 2259
Hpy8I	GTNNAC	8 cut(s)	227, 365, 1058, 1140, 1525, 1857, 1946, 2317
Hpy99I	CGWCG	1 cut(s)	106
HpyCH4III	ACNGT	2 cut(s)	379, 774
HpyCH4IV	ACGT	2 cut(s)	101, 1233
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 61, 80, 284, 1372, 1553, 1748, 2134
HpySE526I	ACGT	2 cut(s)	101, 1233
Hsp92II	CATG	8 cut(s)	59, 176, 295, 1504, 1610, 1751, 2004, 2221
HspAI	GCGC	2 cut(s)	1622, 2223
Kzo9I	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
LguI	GCTCTTC	2 cut(s)	541, 2291
LmnI	GCTCC	8 cut(s)	138, 700, 1279, 1363, 1496, 1707, 1987, 2025
Lsp1109I	GCAGC	4 cut(s)	137, 484, 542, 898
LweI	GCATC	6 cut(s)	34, 721, 834, 1565, 1729, 2197
MaeI	CTAG	3 cut(s)	135, 1047, 1949
MaeII	ACGT	2 cut(s)	101, 1233
MaeIII	GTNAC	2 cut(s)	2018, 2207
MalI	GATC	7 cut(s)	393, 765, 900, 1308, 1589, 1848, 1971
MboI	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
MfeI	CAATTG	2 cut(s)	457, 606
MflI	RGATCY	1 cut(s)	1306
MhlI	GDGCHC	8 cut(s)	261, 289, 384, 577, 741, 969, 1457, 1948
MlyI	GAGTC	7 cut(s)	611, 979, 1103, 1139, 1145, 1283, 1832
MmeI	TCCRAC	2 cut(s)	1216, 1257
MroXI	GAANNNNTTC	4 cut(s)	449, 486, 953, 1437
MseI	TTAA	7 cut(s)	554, 792, 810, 1013, 1313, 2091, 2132
MspA1I	CMGCKG	1 cut(s)	1802
MspI	CCGG	4 cut(s)	741, 902, 2069, 2228
MspR9I	CCNGG	3 cut(s)	526, 741, 1402
MunI	CAATTG	2 cut(s)	457, 606
MvaI	CCWGG	2 cut(s)	526, 1402
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	8 cut(s)	44, 61, 80, 284, 1372, 1553, 1748, 2134
NciI	CCSGG	1 cut(s)	741
NcoI	CCATGG	1 cut(s)	1500
NdeI	CATATG	1 cut(s)	928
NdeII	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
NlaIII	CATG	8 cut(s)	59, 176, 295, 1504, 1610, 1751, 2004, 2221
NlaIV	GGNNCC	6 cut(s)	721, 739, 1087, 1200, 1498, 2232
NmuCI	GTSAC	1 cut(s)	2207
NspI	RCATGY	1 cut(s)	176
NspV	TTCGAA	1 cut(s)	1293
PciSI	GCTCTTC	2 cut(s)	541, 2291
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 1772
PdmI	GAANNNNTTC	4 cut(s)	449, 486, 953, 1437
PfeI	GAWTC	5 cut(s)	251, 482, 680, 1145, 1633
PkrI	GCNGC	6 cut(s)	37, 127, 499, 532, 888, 2241
PleI	GAGTC	7 cut(s)	610, 979, 1102, 1138, 1144, 1282, 1832
PpsI	GAGTC	7 cut(s)	610, 979, 1102, 1138, 1144, 1282, 1832
PshAI	GACNNNNGTC	1 cut(s)	772
Psp124BI	GAGCTC	1 cut(s)	1457
Psp6I	CCWGG	2 cut(s)	524, 1400
PspFI	CCCAGC	2 cut(s)	734, 1698
PspGI	CCWGG	2 cut(s)	524, 1400
PspN4I	GGNNCC	6 cut(s)	721, 739, 1087, 1200, 1498, 2232
PspOMI	GGGCCC	1 cut(s)	737
PspPI	GGNCC	5 cut(s)	737, 738, 1085, 1610, 2047
PstNI	CAGNNNCTG	1 cut(s)	997
PsuI	RGATCY	1 cut(s)	1306
PvuII	CAGCTG	1 cut(s)	1802
RsaI	GTAC	2 cut(s)	376, 1757
RsaNI	GTAC	2 cut(s)	375, 1756
SacI	GAGCTC	1 cut(s)	1457
SapI	GCTCTTC	2 cut(s)	541, 2291
SaqAI	TTAA	7 cut(s)	554, 792, 810, 1013, 1313, 2091, 2132
SatI	GCNGC	6 cut(s)	36, 126, 498, 531, 887, 2240
Sau3AI	GATC	7 cut(s)	391, 763, 898, 1306, 1587, 1846, 1969
Sau96I	GGNCC	5 cut(s)	737, 738, 1085, 1610, 2047
SchI	GAGTC	7 cut(s)	611, 979, 1103, 1139, 1145, 1283, 1832
ScrFI	CCNGG	3 cut(s)	526, 741, 1402
SduI	GDGCHC	8 cut(s)	261, 289, 384, 577, 741, 969, 1457, 1948
SfaNI	GCATC	6 cut(s)	34, 721, 834, 1565, 1729, 2197
SfuI	TTCGAA	1 cut(s)	1293
SinI	GGWCC	3 cut(s)	1085, 1610, 2047
SmlI	CTYRAG	2 cut(s)	368, 2257
SmoI	CTYRAG	2 cut(s)	368, 2257
SsiI	CCGC	6 cut(s)	35, 595, 1472, 1835, 2180, 2240
SspI	AATATT	1 cut(s)	1783
SspMI	CTAG	3 cut(s)	135, 1047, 1949
SstI	GAGCTC	1 cut(s)	1457
StyD4I	CCNGG	3 cut(s)	524, 739, 1400
StyI	CCWWGG	2 cut(s)	134, 1500
TaaI	ACNGT	2 cut(s)	379, 774
TaiI	ACGT	2 cut(s)	104, 1236
TaqI	TCGA	8 cut(s)	104, 130, 453, 766, 1293, 1766, 1925, 1931
TatI	WGTACW	1 cut(s)	1755
TauI	GCSGC	2 cut(s)	38, 2242
TfiI	GAWTC	5 cut(s)	251, 482, 680, 1145, 1633
Tru1I	TTAA	7 cut(s)	554, 792, 810, 1013, 1313, 2091, 2132
Tru9I	TTAA	7 cut(s)	554, 792, 810, 1013, 1313, 2091, 2132
TscAI	CASTG	3 cut(s)	1147, 1819, 2327
TseFI	GTSAC	1 cut(s)	2207
TseI	GCWGC	4 cut(s)	125, 497, 530, 886
Tsp45I	GTSAC	1 cut(s)	2207
TspDTI	ATGAA	6 cut(s)	432, 479, 945, 1257, 1341, 1929
TspGWI	ACGGA	2 cut(s)	2077, 2132
TspRI	CASTG	3 cut(s)	1147, 1819, 2327
VneI	GTGCAC	1 cut(s)	1944
VpaK11BI	GGWCC	3 cut(s)	1085, 1610, 2047
XagI	CCTNNNNNAGG	1 cut(s)	523
XapI	RAATTY	4 cut(s)	936, 1068, 1885, 1927
XceI	RCATGY	1 cut(s)	176
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1408
XmaJI	CCTAGG	1 cut(s)	134
XmnI	GAANNNNTTC	4 cut(s)	449, 486, 953, 1437
XspI	CTAG	3 cut(s)	135, 1047, 1949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.