Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001789

Physical Location & Seq

Genomic Coordinates Forward (+)

61443597 .. 61448297

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG301500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGTGCAAGACGCTCTCTGCAATTTATTGCAAAGTAATGTCAATATTTCCTTCCTTGGAAGCGGCTCGGCCTAGGAGCAAATCTGGCATCCAAGCTTTATGTTCATTGCATGTAGGGCTTGAAAAGGCGAAGAATGTGCTTCAACACTGCTCAGAATGTAGTAAACTTTACCTGGCTATAACTGGGGATTCTGTGCTCTCAAAATTTGAGAAGGCAAGAAGTGCTCTCATGGATAGTCTCAGGCGTGTTGAAGATATTGTTCCACAATCTATTGGTTGTCAGATTCAAGAGGTTCTTAGTGAACTTGAGTGTACTGTCTTCTCACTTGATCCCTCAGAGAAGCAAGTTGGTGATGACATAATTGCTCTGCTCCAGCAAGGGAGAAAATTTGACAACTGCAGTGACATTAACGAGCTAGAATCTTTTCATCAGGCTGCTATCAAGCTTGGTATTACGTCTTCTACGGCAGCTCTTAGAGAGAGAAGAGCTCTAAAAAAACTCATCCAAAGAGCCCGTGCTGAGGAGGATAAGCGGAAGGAGTCAATCGTGGCTTATCTATTGCATCTTATGAGAAAGTACTCCAAGTTGTTTAGAAGTGATTTCTCAGATGATAATGATTCACAGGGTTCTGCACCTTGTTCTCCCACTGTTCAATGTTCTAATGAGGATACTGGGTCTGGGGGTAATGGTCAAGCATTTGACCGACAATTGTCAAAAGTTAGTTCTTTTAATTTCAAGACCTCTTTTAGTTACAAGTCGAACACTAGAAAATCAGGTCAGATGGCTCTTCCACCTGAAGAATTGAGGTGTCCAATATCATTGCAGCTTATGTATGACCCGGTCATCATTGCTTCTGGTCAAACCTATGAAAGGATTTGCATTGAAAAATGGTTCAGTGATGGGCATAGTACTTGCCCAAAGACTAAACAAAAGCTGAGTCATCTTTCTCTTACTCCCAATTTCTGTGTCAAGGGTCTCATTTCTAGTTGGTGTGAACAGAATGGAATTTCCATTCCTGATGGCCCCCCAGAGTCGCTTGACCTTAACTATTGGAGGCTGGCATTTTCTGAATCTGAGTCCAGTAATTCAAAATCTATGGGTAGTGTTGGCTCTTGCAAGTTGAAGGGTGCCAAAGTGGTTCCTATAGAGGAGAGTGGTACAATAGAGGAGGCTGTTGGAAATGAAACAGAAGAGTTGTCTCCGGCATCAGAAGAGTCCGAGCCTGATGCTTTTGAGAGTTATCAGGATCTTTTAACTGTCTTGAATGAAGGGGAGGATTTCAGGATAAAGTGCAAGGTGGTGGAGCAAATAAGGCTCCTGCTGAAGGATGATGAGGAGGCCAGGATGTACATGGGGGCTAATGGGTTTGTTGAAGCACTTCTACACTTTCTTAACTCAGCTTTGCGTGAAGCAAATGTTTTGGCTCAAGAAAGTGGAGCTATGGCTCTATTCAATCTTGCTGTGAATAATAACAGAAATAAGGAGACAATGCTTGCGTCAGGGGTAATTTTGTTGCTGGAGGAAATGATCTCCTATCCCAGTTCTCATGGACCTGCGACAGCCCTTTATCTGAATCTCTCCTGCCTTGAAGAAGCCAAGCCTCTAATTGGCACAAGCCCTGCTGTCCCTTTCTTAACCCAACTCCTTCAAGCTAATGCTGAAACCCAATGCAAGCTTGATGCCCTCCATGCCCTATACAACCTTTCTAGCATTCCCTCAAACATTCCAAATCTTCTTTCAGCCAGTATCATCAGTGGTTTGCAATCCCTTCTTGCAGACTCTGGTGAACATTCATGGACAGAAAAATGTATAGCTGTTTTGATAAATTTGGCTTCAAGTAATTCTGCGAAAGATGAAATGATTTCAAATACGAAGCTTATCAGTGCACTAGCAGCACTTCTGGAGGCTGAGCAACCCATTGAGCAGGAGCAAGCTGTCTCATGTCTCTTTATGTTGTGTAATGGGAATGAGAAATGCAGTCAGATGGTCCTGCAGGAAGGGGTAATTCCCGCATTGGTGTCGATGTCCGTTAATGGAACATCAAGAGGAAAAGAGAAAGCTCAGAAGCTGTTAATGCTGTTTCGTGAGCAGAGACAAAGAGACCAATCACCTCCGGAGGAGAAGGTGCAACTCTGTGAACAAAATGACAACAATCCCACACCCGCTCCAGAATCAAAGCCGCTATGCAAATCCATCTCAAGAAGAAAGATGGGCAAAGCTTTTAGCTTCTTATGGAAGAGCAAAAGCTATTCTGTTTACCAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

755

Amino Acids

83.13

Weight (kDa)

5.54

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	265 - 334	5.7e-19	U-box domain
ARM_ARMC5	PF24768	536 - 685	1.1e-11	ARMC5
ARM_PUB	PF25598	546 - 699	2.1e-10	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530
fragaria_vesca	FvH4_4g24030 FvH4_4g24030 FvH4_4g24030
malus_domestica	MD16G1116600.v1.1
prunus_persica	Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1
pyrus_communis	pycom13g10100 pycom16g09990
rosa_chinensis	RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381
rosa_laevigata	RLG00000002065 RLG00000002066 RLG00000006953
rosa_multiflora	Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237030 Rroxscaffold_5G00372450
rosa_rugosa	Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800
rosa_samantha	Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600
rosa_wichuraiana	Rw4G026200 Rw7G029570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1561
AccB1I	GGYRCC	1 cut(s)	1127
AccBSI	CCGCTC	1 cut(s)	2165
AccIII	TCCGGA	1 cut(s)	2113
AciI	CCGC	5 cut(s)	62, 532, 2010, 2163, 2180
AclWI	GGATC	2 cut(s)	323, 1254
AcsI	RAATTY	4 cut(s)	203, 386, 1005, 1825
AcuI	CTGAAG	2 cut(s)	816, 1343
AfaI	GTAC	5 cut(s)	313, 578, 910, 1159, 1349
AfiI	CCNNNNNNNGG	4 cut(s)	520, 870, 1324, 1607
AjnI	CCWGG	2 cut(s)	171, 1340
AjuI	GAANNNNNNNTTGG	2 cut(s)	1720, 1752
Alw21I	GWGCWC	4 cut(s)	198, 226, 490, 1888
Alw26I	GTCTC	8 cut(s)	242, 980, 1203, 1478, 1942, 1949, 2086, 2094
Alw44I	GTGCAC	1 cut(s)	1884
AlwI	GGATC	2 cut(s)	323, 1254
AlwNI	CAGNNNCTG	2 cut(s)	1781, 2068
Aor13HI	TCCGGA	1 cut(s)	2113
AoxI	GGCC	3 cut(s)	68, 1021, 1338
ApaLI	GTGCAC	1 cut(s)	1884
ApeKI	GCWGC	4 cut(s)	434, 467, 823, 1892
ApoI	RAATTY	4 cut(s)	203, 386, 1005, 1825
ArsI	GACNNNNNNTTYG	2 cut(s)	922, 954
Asp700I	GAANNNNTTC	2 cut(s)	423, 1377
AspA2I	CCTAGG	1 cut(s)	71
AspS9I	GGNCC	3 cut(s)	1022, 1550, 1987
AsuC2I	CCSGG	1 cut(s)	839
AsuHPI	GGTGA	3 cut(s)	362, 1796, 2100
AvaII	GGWCC	2 cut(s)	1550, 1987
AvrII	CCTAGG	1 cut(s)	71
BaeGI	GKGCMC	1 cut(s)	1888
BanI	GGYRCC	1 cut(s)	1127
BanII	GRGCYC	2 cut(s)	490, 514
BarI	GAAGNNNNNNTAC	4 cut(s)	442, 474, 1365, 1397
BbsI	GAAGAC	2 cut(s)	310, 450
Bbv12I	GWGCWC	4 cut(s)	198, 226, 490, 1888
BbvCI	CCTCAGC	1 cut(s)	519
BbvI	GCAGC	4 cut(s)	421, 479, 835, 1904
BccI	CCATC	6 cut(s)	775, 893, 1013, 1978, 2201, 2203
BceAI	ACGGC	1 cut(s)	480
BcgI	CGANNNNNNTGC	6 cut(s)	118, 152, 1208, 1242, 2001, 2035
BciT130I	CCWGG	2 cut(s)	173, 1342
BciVI	GTATCC	1 cut(s)	661
BcnI	CCSGG	1 cut(s)	839
BcoDI	GTCTC	8 cut(s)	242, 980, 1203, 1478, 1942, 1949, 2086, 2094
BfaI	CTAG	6 cut(s)	72, 416, 765, 984, 1707, 1889
BfmI	CTRYAG	3 cut(s)	397, 1143, 1991
BfuAI	ACCTGC	1 cut(s)	1561
BfuI	GTATCC	1 cut(s)	661
BisI	GCNGC	6 cut(s)	63, 435, 468, 824, 1893, 2180
BlnI	CCTAGG	1 cut(s)	71
BlpI	GCTNAGC	1 cut(s)	1908
BlsI	GCNGC	6 cut(s)	64, 436, 469, 825, 1894, 2181
BmcAI	AGTACT	2 cut(s)	578, 910
Bme1390I	CCNGG	3 cut(s)	173, 839, 1342
Bme18I	GGWCC	2 cut(s)	1550, 1987
BmgT120I	GGNCC	3 cut(s)	1022, 1550, 1987
BmiI	GGNNCC	4 cut(s)	1024, 1129, 1140, 1316
BmrFI	CCNGG	3 cut(s)	173, 839, 1342
BmrI	ACTGGG	3 cut(s)	192, 681, 1533
BmsI	GCATC	5 cut(s)	96, 571, 1214, 1216, 1669
BmuI	ACTGGG	3 cut(s)	192, 681, 1533
BoxI	GACNNNNGTC	1 cut(s)	709
BpiI	GAAGAC	2 cut(s)	310, 450
BplI	GAGNNNNNCTC	2 cut(s)	472, 504
BpmI	CTGGAG	4 cut(s)	356, 1538, 1922, 2151
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu1102I	GCTNAGC	1 cut(s)	1908
BpuEI	CTTGAG	3 cut(s)	326, 1410, 2182
BpuMI	CCSGG	1 cut(s)	839
BsaI	GGTCTC	2 cut(s)	980, 2094
BsaJI	CCNNGG	2 cut(s)	54, 71
BsaWI	WCCGGW	1 cut(s)	2113
BsaXI	ACNNNNNCTCC	2 cut(s)	2149, 2179
Bsc4I	CCNNNNNNNGG	4 cut(s)	520, 870, 1324, 1607
Bse1I	ACTGG	6 cut(s)	187, 676, 1080, 1539, 1743, 2260
Bse3DI	GCAATG	3 cut(s)	104, 818, 846
BseAI	TCCGGA	1 cut(s)	2113
BseBI	CCWGG	2 cut(s)	173, 1342
BseDI	CCNNGG	2 cut(s)	54, 71
BseGI	GGATG	4 cut(s)	87, 501, 1333, 1350
BseLI	CCNNNNNNNGG	4 cut(s)	520, 870, 1324, 1607
BseMI	GCAATG	3 cut(s)	104, 818, 846
BseNI	ACTGG	6 cut(s)	187, 676, 1080, 1539, 1743, 2260
BseRI	GAGGAG	5 cut(s)	536, 1163, 1181, 1349, 2132
BseSI	GKGCMC	1 cut(s)	1888
BseXI	GCAGC	4 cut(s)	421, 479, 835, 1904
BsgI	GTGCAG	1 cut(s)	615
BshFI	GGCC	3 cut(s)	70, 1023, 1340
BshNI	GGYRCC	1 cut(s)	1127
BsiHKAI	GWGCWC	4 cut(s)	198, 226, 490, 1888
BsiSI	CCGG	3 cut(s)	839, 1202, 2114
BslFI	GGGAC	1 cut(s)	1610
BslI	CCNNNNNNNGG	4 cut(s)	520, 870, 1324, 1607
BsmAI	GTCTC	8 cut(s)	242, 980, 1203, 1478, 1942, 1949, 2086, 2094
BsmFI	GGGAC	1 cut(s)	1610
BsmI	GAATGC	1 cut(s)	1710
BsnI	GGCC	3 cut(s)	70, 1023, 1340
Bso31I	GGTCTC	2 cut(s)	980, 2094
Bsp1286I	GDGCHC	5 cut(s)	198, 226, 490, 514, 1888
Bsp13I	TCCGGA	1 cut(s)	2113
Bsp1407I	TGTACA	1 cut(s)	1347
Bsp143I	GATC	3 cut(s)	328, 1246, 1527
Bsp1720I	GCTNAGC	1 cut(s)	1908
BspACI	CCGC	5 cut(s)	62, 532, 2010, 2163, 2180
BspANI	GGCC	3 cut(s)	70, 1023, 1340
BspEI	TCCGGA	1 cut(s)	2113
BspLI	GGNNCC	4 cut(s)	1024, 1129, 1140, 1316
BspMAI	CTGCAG	2 cut(s)	401, 1995
BspMI	ACCTGC	1 cut(s)	1561
BspPI	GGATC	2 cut(s)	323, 1254
BspQI	GCTCTTC	3 cut(s)	478, 792, 2231
BspT107I	GGYRCC	1 cut(s)	1127
BspTNI	GGTCTC	2 cut(s)	980, 2094
BsrBI	CCGCTC	1 cut(s)	2165
BsrDI	GCAATG	3 cut(s)	104, 818, 846
BsrGI	TGTACA	1 cut(s)	1347
BsrI	ACTGG	6 cut(s)	187, 676, 1080, 1539, 1743, 2260
BssECI	CCNNGG	2 cut(s)	54, 71
BssMI	GATC	3 cut(s)	328, 1246, 1527
BssT1I	CCWWGG	2 cut(s)	54, 71
Bst2UI	CCWGG	2 cut(s)	173, 1342
Bst4CI	ACNGT	3 cut(s)	316, 649, 1258
Bst6I	CTCTTC	5 cut(s)	478, 792, 1185, 1206, 2231
BstAPI	GCANNNNNTGC	1 cut(s)	221
BstAUI	TGTACA	1 cut(s)	1347
BstC8I	GCNNGC	4 cut(s)	1059, 1494, 1673, 1932
BstENI	CCTNNNNNAGG	2 cut(s)	868, 1322
BstF5I	GGATG	4 cut(s)	87, 501, 1333, 1350
BstKTI	GATC	3 cut(s)	331, 1249, 1530
BstMAI	GTCTC	8 cut(s)	242, 980, 1203, 1478, 1942, 1949, 2086, 2094
BstMBI	GATC	3 cut(s)	328, 1246, 1527
BstMWI	GCNNNNNNNGC	7 cut(s)	84, 115, 221, 1312, 1688, 1892, 2074
BstNI	CCWGG	2 cut(s)	173, 1342
BstNSI	RCATGY	1 cut(s)	113
BstPAI	GACNNNNGTC	1 cut(s)	709
BstSCI	CCNGG	3 cut(s)	171, 837, 1340
BstSFI	CTRYAG	3 cut(s)	397, 1143, 1991
BstSLI	GKGCMC	1 cut(s)	1888
BstV1I	GCAGC	4 cut(s)	421, 479, 835, 1904
BstV2I	GAAGAC	2 cut(s)	310, 450
BstX2I	RGATCY	1 cut(s)	1246
BstYI	RGATCY	1 cut(s)	1246
BsuI	GTATCC	1 cut(s)	661
BsuRI	GGCC	3 cut(s)	70, 1023, 1340
BtsCI	GGATG	4 cut(s)	87, 501, 1333, 1350
BtsI	GCAGTG	2 cut(s)	145, 406
BtsIMutI	CAGTG	7 cut(s)	145, 406, 645, 901, 1759, 1888, 2267
BveI	ACCTGC	1 cut(s)	1561
Cac8I	GCNNGC	4 cut(s)	1059, 1494, 1673, 1932
CaiI	CAGNNNCTG	2 cut(s)	1781, 2068
Cfr13I	GGNCC	3 cut(s)	1022, 1550, 1987
CseI	GACGC	2 cut(s)	19, 1485
Csp6I	GTAC	5 cut(s)	312, 577, 909, 1158, 1348
CviAII	CATG	7 cut(s)	110, 229, 1351, 1547, 1688, 1794, 1941
CviQI	GTAC	5 cut(s)	312, 577, 909, 1158, 1348
DpnI	GATC	3 cut(s)	330, 1248, 1529
DpnII	GATC	3 cut(s)	328, 1246, 1527
Eam1104I	CTCTTC	5 cut(s)	478, 792, 1185, 1206, 2231
EarI	CTCTTC	5 cut(s)	478, 792, 1185, 1206, 2231
Ecl136II	GAGCTC	1 cut(s)	488
Eco130I	CCWWGG	2 cut(s)	54, 71
Eco24I	GRGCYC	2 cut(s)	490, 514
Eco31I	GGTCTC	2 cut(s)	980, 2094
Eco47I	GGWCC	2 cut(s)	1550, 1987
Eco53kI	GAGCTC	1 cut(s)	488
Eco57I	CTGAAG	2 cut(s)	816, 1343
EcoICRI	GAGCTC	1 cut(s)	488
EcoNI	CCTNNNNNAGG	2 cut(s)	868, 1322
EcoRII	CCWGG	2 cut(s)	171, 1340
EcoT14I	CCWWGG	2 cut(s)	54, 71
EcoT38I	GRGCYC	2 cut(s)	490, 514
ErhI	CCWWGG	2 cut(s)	54, 71
FaeI	CATG	7 cut(s)	113, 232, 1354, 1550, 1691, 1797, 1944
FalI	AAGNNNNNCTT	2 cut(s)	279, 311
FaqI	GGGAC	1 cut(s)	1610
FatI	CATG	7 cut(s)	109, 228, 1350, 1546, 1687, 1793, 1940
FauI	CCCGC	2 cut(s)	2017, 2170
Fnu4HI	GCNGC	6 cut(s)	63, 435, 468, 824, 1893, 2180
FokI	GGATG	4 cut(s)	74, 488, 1340, 1357
FriOI	GRGCYC	2 cut(s)	490, 514
Fsp4HI	GCNGC	6 cut(s)	63, 435, 468, 824, 1893, 2180
FspBI	CTAG	6 cut(s)	72, 416, 765, 984, 1707, 1889
GluI	GCNGC	6 cut(s)	63, 435, 468, 824, 1893, 2180
GsuI	CTGGAG	4 cut(s)	356, 1538, 1922, 2151
HaeIII	GGCC	3 cut(s)	70, 1023, 1340
HapII	CCGG	3 cut(s)	839, 1202, 2114
HgaI	GACGC	2 cut(s)	19, 1485
Hin1II	CATG	7 cut(s)	113, 232, 1354, 1550, 1691, 1797, 1944
HindIII	AAGCTT	5 cut(s)	93, 443, 1673, 1874, 2217
HpaII	CCGG	3 cut(s)	839, 1202, 2114
HphI	GGTGA	3 cut(s)	362, 1796, 2100
Hpy166II	GTNNAC	8 cut(s)	164, 302, 312, 995, 1787, 1886, 2138, 2257
Hpy8I	GTNNAC	8 cut(s)	164, 302, 312, 995, 1787, 1886, 2138, 2257
HpyCH4III	ACNGT	3 cut(s)	316, 649, 1258
HpyCH4IV	ACGT	1 cut(s)	455
HpyF10VI	GCNNNNNNNGC	7 cut(s)	84, 115, 221, 1312, 1688, 1892, 2074
HpySE526I	ACGT	1 cut(s)	455
Hsp92II	CATG	7 cut(s)	113, 232, 1354, 1550, 1691, 1797, 1944
Kpn2I	TCCGGA	1 cut(s)	2113
Kzo9I	GATC	3 cut(s)	328, 1246, 1527
LguI	GCTCTTC	3 cut(s)	478, 792, 2231
LmnI	GCTCC	7 cut(s)	75, 375, 1303, 1320, 1436, 1927, 2170
Lsp1109I	GCAGC	4 cut(s)	421, 479, 835, 1904
LweI	GCATC	5 cut(s)	96, 571, 1214, 1216, 1669
MaeI	CTAG	6 cut(s)	72, 416, 765, 984, 1707, 1889
MaeII	ACGT	1 cut(s)	455
MaeIII	GTNAC	2 cut(s)	401, 749
MalI	GATC	3 cut(s)	330, 1248, 1529
MbiI	CCGCTC	1 cut(s)	2165
MboI	GATC	3 cut(s)	328, 1246, 1527
MfeI	CAATTG	1 cut(s)	707
MflI	RGATCY	1 cut(s)	1246
MhlI	GDGCHC	5 cut(s)	198, 226, 490, 514, 1888
MlyI	GAGTC	6 cut(s)	548, 946, 1040, 1085, 1223, 1772
MmeI	TCCRAC	1 cut(s)	1156
MroI	TCCGGA	1 cut(s)	2113
MroXI	GAANNNNTTC	2 cut(s)	423, 1377
MseI	TTAA	8 cut(s)	408, 729, 1044, 1253, 1392, 1634, 2031, 2072
MspI	CCGG	3 cut(s)	839, 1202, 2114
MspR9I	CCNGG	3 cut(s)	173, 839, 1342
MunI	CAATTG	1 cut(s)	707
Mva1269I	GAATGC	1 cut(s)	1710
MvaI	CCWGG	2 cut(s)	173, 1342
MwoI	GCNNNNNNNGC	7 cut(s)	84, 115, 221, 1312, 1688, 1892, 2074
NciI	CCSGG	1 cut(s)	839
NdeII	GATC	3 cut(s)	328, 1246, 1527
NlaIII	CATG	7 cut(s)	113, 232, 1354, 1550, 1691, 1797, 1944
NlaIV	GGNNCC	4 cut(s)	1024, 1129, 1140, 1316
NmeAIII	GCCGAG	1 cut(s)	46
NmuCI	GTSAC	1 cut(s)	401
NspI	RCATGY	1 cut(s)	113
PciSI	GCTCTTC	3 cut(s)	478, 792, 2231
PctI	GAATGC	1 cut(s)	1710
PdmI	GAANNNNTTC	2 cut(s)	423, 1377
PfeI	GAWTC	7 cut(s)	188, 283, 419, 617, 1070, 1573, 2171
PflFI	GACNNNGTC	1 cut(s)	839
PkrI	GCNGC	6 cut(s)	64, 436, 469, 825, 1894, 2181
PleI	GAGTC	6 cut(s)	547, 945, 1039, 1084, 1222, 1772
PpsI	GAGTC	6 cut(s)	547, 945, 1039, 1084, 1222, 1772
PshAI	GACNNNNGTC	1 cut(s)	709
Psp124BI	GAGCTC	1 cut(s)	490
Psp6I	CCWGG	2 cut(s)	171, 1340
PspGI	CCWGG	2 cut(s)	171, 1340
PspN4I	GGNNCC	4 cut(s)	1024, 1129, 1140, 1316
PspPI	GGNCC	3 cut(s)	1022, 1550, 1987
PstI	CTGCAG	2 cut(s)	401, 1995
PstNI	CAGNNNCTG	2 cut(s)	1781, 2068
PsuI	RGATCY	1 cut(s)	1246
PsyI	GACNNNGTC	1 cut(s)	839
RsaI	GTAC	5 cut(s)	313, 578, 910, 1159, 1349
RsaNI	GTAC	5 cut(s)	312, 577, 909, 1158, 1348
SacI	GAGCTC	1 cut(s)	490
SapI	GCTCTTC	3 cut(s)	478, 792, 2231
SaqAI	TTAA	8 cut(s)	408, 729, 1044, 1253, 1392, 1634, 2031, 2072
SatI	GCNGC	6 cut(s)	63, 435, 468, 824, 1893, 2180
Sau3AI	GATC	3 cut(s)	328, 1246, 1527
Sau96I	GGNCC	3 cut(s)	1022, 1550, 1987
SbfI	CCTGCAGG	1 cut(s)	1995
ScaI	AGTACT	2 cut(s)	578, 910
SchI	GAGTC	6 cut(s)	548, 946, 1040, 1085, 1223, 1772
ScrFI	CCNGG	3 cut(s)	173, 839, 1342
SdaI	CCTGCAGG	1 cut(s)	1995
SduI	GDGCHC	5 cut(s)	198, 226, 490, 514, 1888
SfaNI	GCATC	5 cut(s)	96, 571, 1214, 1216, 1669
SfcI	CTRYAG	3 cut(s)	397, 1143, 1991
SinI	GGWCC	2 cut(s)	1550, 1987
SmlI	CTYRAG	3 cut(s)	305, 1425, 2197
SmoI	CTYRAG	3 cut(s)	305, 1425, 2197
Sse8387I	CCTGCAGG	1 cut(s)	1995
SsiI	CCGC	5 cut(s)	62, 532, 2010, 2163, 2180
SspI	AATATT	1 cut(s)	45
SspMI	CTAG	6 cut(s)	72, 416, 765, 984, 1707, 1889
SstI	GAGCTC	1 cut(s)	490
StyD4I	CCNGG	3 cut(s)	171, 837, 1340
StyI	CCWWGG	2 cut(s)	54, 71
TaaI	ACNGT	3 cut(s)	316, 649, 1258
TaiI	ACGT	1 cut(s)	458
TaqI	TCGA	2 cut(s)	758, 2021
TaqII	GACCGA	1 cut(s)	717
TatI	WGTACW	4 cut(s)	311, 576, 908, 1347
TauI	GCSGC	2 cut(s)	65, 2182
TfiI	GAWTC	7 cut(s)	188, 283, 419, 617, 1070, 1573, 2171
Tru1I	TTAA	8 cut(s)	408, 729, 1044, 1253, 1392, 1634, 2031, 2072
Tru9I	TTAA	8 cut(s)	408, 729, 1044, 1253, 1392, 1634, 2031, 2072
TscAI	CASTG	7 cut(s)	152, 406, 652, 901, 1759, 1888, 2267
TseFI	GTSAC	1 cut(s)	401
TseI	GCWGC	4 cut(s)	434, 467, 823, 1892
Tsp45I	GTSAC	1 cut(s)	401
TspDTI	ATGAA	7 cut(s)	93, 416, 882, 1197, 1281, 1782, 1869
TspGWI	ACGGA	1 cut(s)	2017
TspRI	CASTG	7 cut(s)	152, 406, 652, 901, 1759, 1888, 2267
Tth111I	GACNNNGTC	1 cut(s)	839
VneI	GTGCAC	1 cut(s)	1884
VpaK11BI	GGWCC	2 cut(s)	1550, 1987
XagI	CCTNNNNNAGG	2 cut(s)	868, 1322
XapI	RAATTY	4 cut(s)	203, 386, 1005, 1825
XceI	RCATGY	1 cut(s)	113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1348
XmaJI	CCTAGG	1 cut(s)	71
XmnI	GAANNNNTTC	2 cut(s)	423, 1377
XspI	CTAG	6 cut(s)	72, 416, 765, 984, 1707, 1889
ZrmI	AGTACT	2 cut(s)	578, 910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.