Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0001789

Physical Location & Seq

Genomic Coordinates Reverse (-)

6766358 .. 6769934

Gene Structure 3577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g09990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGATATTACTGAGGTTGAAGAAAGCTTATTTGCCGCCAGCGATGCCAAGTTGCACGGAGAGTTGTGCAAGGCACTCTCTGCAATTTATTGCAAAATAATGTCAATATTTCCTTCTTTGGAAGCAGCGCGACCTAGGAGCAAGTCTGGTATCCAAGCTTTATGTTCATTGCATGTAGCACTTGAAAAATCTAAGAATGTTCTTCAGCATTGCGCAGAATGTAGTAAACTTTACTTGGCTATAACTGGGGATTCTGTGCTCTCAAAATTTGAAAGGGCAAGATGTGCTCTCATGGATAGTCTTAGACGTGTTGAAGACATTGTTCCACAATCTATTGGTTGTCAGATTGAAGACATTGTTAGTGAACTTGAGGGTACTGTGTTCTCACTTGATCCCTTAGAGAAGCAAGTCGGTGATGAAATAATTGCGCTACTCCAGCAAGGGAAAAAGTTTGACAACTGTAATGACAATAATGAGCTGGAATCTTTTCATCAGGCTGCTACCAAACTTGGTATTACCTCTTCCAGGGCAGCTCTTACTGAGAGAAGAGCTTTAAAGAAAATCATCCAAAGAGCCCGTGCTGAGGAAGATAAGCGGAAAGAGTCAATTGTAGCTTATATATTACATCTTATGCGAAAATACTCTAAGCTGTTTAGAAGTGAAATCTCAGATGACAATGATTCACAAGGTTCTGCACCTTGTTCTCCCACTGTACAGGGTTCTATTGAGGATGCTGGGCCCGGTGGCAATGGTCAAGCATTTGATCGACAAATGTCAAATTTTAGTTCTTTTAACTTCAAAAGTTCTTTTAGTTCCAAGCCAAACAATCGGAAATCAGGTCAGATACCTCTTCCACCTGAAGAATTGAGGTGTCCGATATCGTTGCAACTTATGTATGATCCGGTCATCATCGCTTCTGGTCAGACATATGAAAGGATTTGCATTGAGAAATGGTTCAGTGATGGGCACAATACATGCCCAAAGACTCAACAGAAGCTGTCTCATCTTTCTTTAACCCCCAATTATTGTGTAAAAGGTCTCATTGCTAATTGGTGTGAACAGAATGCAATTTCTGTTCCAGATGGTCCCCCAGAGTCTCTGGACCTCAACTATTGGAGGCTTGCATTTGTGTGTGAGTCCACTGATTCAAAATGTATGGGTAGTATAGGCTCTTGCAAGTTGAAGGGTGTCAAGGTGGTTCCTTTAGAGGAGAGTCATACTATAAAGGAGGATGTTGGAAATGAAACAGAAGATGTGTCTCCATTAGAGGAAGAGTCTGAGCTTGATGTTTTCGAAAGTTATCAGGATCTTTTAACTGCCTTGAATGAAGAGGAAGACTTCAGGAAGAGGTGCAAGGTAGTGGAGCAAATAAGGCTCTTGCTGAAGAATGATGAGGAAGCCAGAATGTATATGGGTGCTAATGGATTTGTTGAAGCACTTCTACATTTTCTGAGCTCAGCTTTGCGTGAAGCAAGTTCTTTGGCTCAGGAAAGTGGAGCCATGGCTCTCTTCAATCTTGCTGTTAACAATAACAGAAACAAGGAAACGATGTTAGCATCAGGGGTAATTTCGTTGCTGGAGGAAATGATCTCCAATCCCAGTTCTCAAGGACCTGCGACAGCCCTCTATCTGAATCTCTCCTGCCTTGAAGAAGCCAAGCCTCTTATTGGAACAAGCCCGGCTGTCTCTTTCTTAACCCAGCTCCTTCGAGCAGATGTTGAAACCCAATGCAAACTTGATGCCCTCCACGCCCTGTACAATCTATCGGGTGTCCAGTCAAATATACCGAAACTTATTTCAGCTGGTATTATCAGTGGTCTCCAATCCCTTCTTGCGGACTCTGGTGACCAAATGTGGACAGAAAAATGTATAGCTGTTTTGATAAACTTGGGATCAAGTAGTTCTGCCAGAGATGAAATGATGTCGAATTCGAGTCTTATCAGTGCCCTAGCAACAATTTTGGAGGCTGAACAACCCATTGAGCAGGAGCAAGCTGTCTCATGTCTGTATATGTTGTGTAACGGGAGCGAGAAATGCAGTCAGATGGTCCTCAAGGAAGGGGTGATTCCGGCATTGGTGTCTATGTCCGTCAATGGCACATCAAGAGGAAAAGAGAAGGCTCAGAAGCTGTTAATGCTGTTCCGTGAGCAGAGACAAAGAGACCAAGCACCTCCTGAGCCGGAGGTGCATCTGTCGGTCGAAAATCGCGACAAGCCCATGTCTGTTCCGGAACCAAAGCCGCTATGCAAATCCTTCTCAAGAAGAAAGATGAGCAAACCATTTAGGTTTTTGTGGAAGAGCAAAAGCTATTCTGTTTACCAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

776

Amino Acids

85.69

Weight (kDa)

5.4

Isoelectric Point (pI)

51.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	286 - 356	3.5e-19	U-box domain
ARM_PUB	PF25598	440 - 719	1.6e-17	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	556 - 705	9.6e-11	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530
fragaria_vesca	FvH4_4g24030 FvH4_4g24030 FvH4_4g24030
malus_domestica	MD16G1116600.v1.1
prunus_persica	Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1
pyrus_communis	pycom13g10100 pycom16g09990
rosa_chinensis	RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381
rosa_laevigata	RLG00000002065 RLG00000002066 RLG00000006953
rosa_multiflora	Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237030 Rroxscaffold_5G00372450
rosa_rugosa	Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800
rosa_samantha	Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600
rosa_wichuraiana	Rw4G026200 Rw7G029570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	214
Acc36I	ACCTGC	1 cut(s)	1621
AccII	CGCG	2 cut(s)	130, 2208
AccIII	TCCGGA	1 cut(s)	2227
AciI	CCGC	4 cut(s)	36, 595, 1835, 2240
AclWI	GGATC	4 cut(s)	386, 893, 1314, 1900
AcsI	RAATTY	3 cut(s)	266, 778, 1927
AcuI	CTGAAG	4 cut(s)	188, 879, 1324, 1403
AfaI	GTAC	3 cut(s)	376, 714, 1757
AfiI	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
AflIII	ACRYGT	1 cut(s)	307
AjiI	CACGTC	1 cut(s)	308
AjnI	CCWGG	1 cut(s)	524
Alw21I	GWGCWC	3 cut(s)	261, 289, 1457
Alw26I	GTCTC	9 cut(s)	1005, 1043, 1101, 1263, 1690, 1823, 2002, 2146, 2154
AlwI	GGATC	4 cut(s)	386, 893, 1314, 1900
AlwNI	CAGNNNCTG	2 cut(s)	997, 2128
Aor13HI	TCCGGA	1 cut(s)	2227
AoxI	GGCC	1 cut(s)	737
ApaI	GGGCCC	1 cut(s)	741
ApeKI	GCWGC	3 cut(s)	125, 497, 530
ApoI	RAATTY	3 cut(s)	266, 778, 1927
Asp700I	GAANNNNTTC	3 cut(s)	486, 953, 1437
AspA2I	CCTAGG	1 cut(s)	134
AspLEI	GCGC	3 cut(s)	130, 215, 430
AspS9I	GGNCC	6 cut(s)	737, 738, 1085, 1102, 1610, 2047
AsuC2I	CCSGG	2 cut(s)	741, 1679
AsuHPI	GGTGA	3 cut(s)	425, 1856, 2074
AsuII	TTCGAA	1 cut(s)	1293
AvaII	GGWCC	4 cut(s)	1085, 1102, 1610, 2047
AvrII	CCTAGG	1 cut(s)	134
BaeGI	GKGCMC	3 cut(s)	741, 969, 1948
BanII	GRGCYC	3 cut(s)	577, 741, 1457
BarI	GAAGNNNNNNTAC	4 cut(s)	505, 537, 1425, 1457
BbsI	GAAGAC	3 cut(s)	321, 357, 1341
Bbv12I	GWGCWC	3 cut(s)	261, 289, 1457
BbvCI	CCTCAGC	1 cut(s)	582
BbvI	GCAGC	3 cut(s)	137, 484, 542
BccI	CCATC	3 cut(s)	956, 1076, 2038
BcgI	CGANNNNNNTGC	2 cut(s)	865, 899
BciT130I	CCWGG	1 cut(s)	526
BciVI	GTATCC	1 cut(s)	161
BcnI	CCSGG	2 cut(s)	741, 1679
BcoDI	GTCTC	9 cut(s)	1005, 1043, 1101, 1263, 1690, 1823, 2002, 2146, 2154
BfaI	CTAG	2 cut(s)	135, 1949
BfuAI	ACCTGC	1 cut(s)	1621
BfuI	GTATCC	1 cut(s)	161
BisI	GCNGC	5 cut(s)	36, 126, 498, 531, 2240
BlnI	CCTAGG	1 cut(s)	134
BlpI	GCTNAGC	1 cut(s)	1456
BlsI	GCNGC	5 cut(s)	37, 127, 499, 532, 2241
Bme1390I	CCNGG	3 cut(s)	526, 741, 1679
Bme18I	GGWCC	4 cut(s)	1085, 1102, 1610, 2047
BmgBI	CACGTC	1 cut(s)	308
BmgT120I	GGNCC	6 cut(s)	737, 738, 1085, 1102, 1610, 2047
BmiI	GGNNCC	5 cut(s)	739, 1087, 1200, 1498, 2232
BmrFI	CCNGG	3 cut(s)	526, 741, 1679
BmrI	ACTGGG	2 cut(s)	255, 1593
BmsI	GCATC	5 cut(s)	34, 721, 1565, 1729, 2197
BmuI	ACTGGG	2 cut(s)	255, 1593
BoxI	GACNNNNGTC	1 cut(s)	772
BpiI	GAAGAC	3 cut(s)	321, 357, 1341
BpmI	CTGGAG	2 cut(s)	419, 1598
Bpu10I	CCTNAGC	3 cut(s)	582, 1485, 2175
Bpu1102I	GCTNAGC	1 cut(s)	1456
Bpu14I	TTCGAA	1 cut(s)	1293
BpuEI	CTTGAG	4 cut(s)	389, 1590, 2036, 2242
BpuMI	CCSGG	2 cut(s)	741, 1679
BsaI	GGTCTC	3 cut(s)	1043, 1823, 2154
BsaJI	CCNNGG	3 cut(s)	134, 525, 1500
BsaWI	WCCGGW	2 cut(s)	901, 2227
Bsc4I	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
Bse1I	ACTGG	4 cut(s)	250, 1599, 1774, 2320
Bse3DI	GCAATG	4 cut(s)	167, 208, 754, 1041
BseAI	TCCGGA	1 cut(s)	2227
BseBI	CCWGG	1 cut(s)	526
BseDI	CCNNGG	3 cut(s)	134, 525, 1500
BseGI	GGATG	3 cut(s)	564, 736, 1237
BseLI	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
BseMI	GCAATG	4 cut(s)	167, 208, 754, 1041
BseMII	CTCAG	9 cut(s)	531, 573, 681, 1269, 1442, 1470, 1499, 2135, 2166
BseNI	ACTGG	4 cut(s)	250, 1599, 1774, 2320
BseRI	GAGGAG	1 cut(s)	1223
BseSI	GKGCMC	3 cut(s)	741, 969, 1948
BseXI	GCAGC	3 cut(s)	137, 484, 542
BseYI	CCCAGC	2 cut(s)	734, 1698
BsgI	GTGCAG	1 cut(s)	678
Bsh1236I	CGCG	2 cut(s)	130, 2208
Bsh1285I	CGRYCG	1 cut(s)	2199
BshFI	GGCC	1 cut(s)	739
BsiEI	CGRYCG	1 cut(s)	2199
BsiHKAI	GWGCWC	3 cut(s)	261, 289, 1457
BsiSI	CCGG	6 cut(s)	741, 902, 1679, 2069, 2180, 2228
BslFI	GGGAC	1 cut(s)	1071
BslI	CCNNNNNNNGG	4 cut(s)	525, 583, 1667, 1834
BsmAI	GTCTC	9 cut(s)	1005, 1043, 1101, 1263, 1690, 1823, 2002, 2146, 2154
BsmFI	GGGAC	1 cut(s)	1071
BsmI	GAATGC	1 cut(s)	1069
BsnI	GGCC	1 cut(s)	739
Bso31I	GGTCTC	3 cut(s)	1043, 1823, 2154
Bsp119I	TTCGAA	1 cut(s)	1293
Bsp120I	GGGCCC	1 cut(s)	737
Bsp1286I	GDGCHC	7 cut(s)	261, 289, 577, 741, 969, 1457, 1948
Bsp13I	TCCGGA	1 cut(s)	2227
Bsp1407I	TGTACA	2 cut(s)	712, 1755
Bsp143I	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
Bsp1720I	GCTNAGC	1 cut(s)	1456
Bsp19I	CCATGG	1 cut(s)	1500
Bsp68I	TCGCGA	1 cut(s)	2208
BspACI	CCGC	4 cut(s)	36, 595, 1835, 2240
BspANI	GGCC	1 cut(s)	739
BspEI	TCCGGA	1 cut(s)	2227
BspFNI	CGCG	2 cut(s)	130, 2208
BspLI	GGNNCC	5 cut(s)	739, 1087, 1200, 1498, 2232
BspMI	ACCTGC	1 cut(s)	1621
BspPI	GGATC	4 cut(s)	386, 893, 1314, 1900
BspQI	GCTCTTC	2 cut(s)	541, 2291
BspT104I	TTCGAA	1 cut(s)	1293
BspTNI	GGTCTC	3 cut(s)	1043, 1823, 2154
BsrDI	GCAATG	4 cut(s)	167, 208, 754, 1041
BsrGI	TGTACA	2 cut(s)	712, 1755
BsrI	ACTGG	4 cut(s)	250, 1599, 1774, 2320
BssECI	CCNNGG	3 cut(s)	134, 525, 1500
BssMI	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
BssT1I	CCWWGG	2 cut(s)	134, 1500
Bst2UI	CCWGG	1 cut(s)	526
Bst4CI	ACNGT	3 cut(s)	379, 461, 712
Bst6I	CTCTTC	8 cut(s)	526, 541, 855, 1266, 1323, 1340, 1514, 2291
BstAPI	GCANNNNNTGC	2 cut(s)	80, 284
BstAUI	TGTACA	2 cut(s)	712, 1755
BstBI	TTCGAA	1 cut(s)	1293
BstC8I	GCNNGC	3 cut(s)	40, 1122, 1992
BstDSI	CCRYGG	1 cut(s)	1500
BstEII	GGTNACC	1 cut(s)	1844
BstENI	CCTNNNNNAGG	1 cut(s)	523
BstF5I	GGATG	3 cut(s)	564, 736, 1237
BstFNI	CGCG	2 cut(s)	130, 2208
BstHHI	GCGC	3 cut(s)	130, 215, 430
BstKTI	GATC	6 cut(s)	394, 766, 901, 1309, 1590, 1895
BstMAI	GTCTC	9 cut(s)	1005, 1043, 1101, 1263, 1690, 1823, 2002, 2146, 2154
BstMBI	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
BstMCI	CGRYCG	1 cut(s)	2199
BstMWI	GCNNNNNNNGC	9 cut(s)	44, 80, 284, 436, 1372, 1748, 2034, 2134, 2185
BstNI	CCWGG	1 cut(s)	526
BstNSI	RCATGY	2 cut(s)	176, 978
BstPAI	GACNNNNGTC	1 cut(s)	772
BstPI	GGTNACC	1 cut(s)	1844
BstSCI	CCNGG	3 cut(s)	524, 739, 1677
BstSLI	GKGCMC	3 cut(s)	741, 969, 1948
BstUI	CGCG	2 cut(s)	130, 2208
BstV1I	GCAGC	3 cut(s)	137, 484, 542
BstV2I	GAAGAC	3 cut(s)	321, 357, 1341
BstX2I	RGATCY	1 cut(s)	1306
BstYI	RGATCY	1 cut(s)	1306
BsuI	GTATCC	1 cut(s)	161
BsuRI	GGCC	1 cut(s)	739
BtgI	CCRYGG	1 cut(s)	1500
BtgZI	GCGATG	2 cut(s)	57, 895
BtrI	CACGTC	1 cut(s)	308
BtsCI	GGATG	3 cut(s)	564, 736, 1237
BtsIMutI	CAGTG	6 cut(s)	708, 964, 1140, 1819, 1948, 2327
BtuMI	TCGCGA	1 cut(s)	2208
BveI	ACCTGC	1 cut(s)	1621
Cac8I	GCNNGC	3 cut(s)	40, 1122, 1992
CaiI	CAGNNNCTG	2 cut(s)	997, 2128
CfoI	GCGC	3 cut(s)	130, 215, 430
Cfr13I	GGNCC	6 cut(s)	737, 738, 1085, 1102, 1610, 2047
Csp6I	GTAC	3 cut(s)	375, 713, 1756
CviAII	CATG	6 cut(s)	173, 292, 975, 1501, 2001, 2218
CviQI	GTAC	3 cut(s)	375, 713, 1756
DpnI	GATC	6 cut(s)	393, 765, 900, 1308, 1589, 1894
DpnII	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
DraI	TTTAAA	1 cut(s)	555
Eam1104I	CTCTTC	8 cut(s)	526, 541, 855, 1266, 1323, 1340, 1514, 2291
EarI	CTCTTC	8 cut(s)	526, 541, 855, 1266, 1323, 1340, 1514, 2291
Ecl136II	GAGCTC	1 cut(s)	1455
Eco130I	CCWWGG	2 cut(s)	134, 1500
Eco24I	GRGCYC	3 cut(s)	577, 741, 1457
Eco31I	GGTCTC	3 cut(s)	1043, 1823, 2154
Eco32I	GATATC	1 cut(s)	879
Eco47I	GGWCC	4 cut(s)	1085, 1102, 1610, 2047
Eco53kI	GAGCTC	1 cut(s)	1455
Eco57I	CTGAAG	4 cut(s)	188, 879, 1324, 1403
Eco91I	GGTNACC	1 cut(s)	1844
EcoICRI	GAGCTC	1 cut(s)	1455
EcoNI	CCTNNNNNAGG	1 cut(s)	523
EcoO109I	RGGNCCY	1 cut(s)	1610
EcoO65I	GGTNACC	1 cut(s)	1844
EcoRI	GAATTC	1 cut(s)	1927
EcoRII	CCWGG	1 cut(s)	524
EcoRV	GATATC	1 cut(s)	879
EcoT14I	CCWWGG	2 cut(s)	134, 1500
EcoT38I	GRGCYC	3 cut(s)	577, 741, 1457
ErhI	CCWWGG	2 cut(s)	134, 1500
FaeI	CATG	6 cut(s)	176, 295, 978, 1504, 2004, 2221
FaqI	GGGAC	1 cut(s)	1071
FatI	CATG	6 cut(s)	172, 291, 974, 1500, 2000, 2217
FauNDI	CATATG	1 cut(s)	928
Fnu4HI	GCNGC	5 cut(s)	36, 126, 498, 531, 2240
FokI	GGATG	3 cut(s)	551, 743, 1244
FriOI	GRGCYC	3 cut(s)	577, 741, 1457
Fsp4HI	GCNGC	5 cut(s)	36, 126, 498, 531, 2240
FspBI	CTAG	2 cut(s)	135, 1949
FspI	TGCGCA	1 cut(s)	214
GlaI	GCGC	3 cut(s)	129, 214, 429
GluI	GCNGC	5 cut(s)	36, 126, 498, 531, 2240
GsaI	CCCAGC	2 cut(s)	738, 1702
GsuI	CTGGAG	2 cut(s)	419, 1598
HaeIII	GGCC	1 cut(s)	739
HapII	CCGG	6 cut(s)	741, 902, 1679, 2069, 2180, 2228
HhaI	GCGC	3 cut(s)	130, 215, 430
Hin1II	CATG	6 cut(s)	176, 295, 978, 1504, 2004, 2221
Hin6I	GCGC	3 cut(s)	128, 213, 428
HinP1I	GCGC	3 cut(s)	128, 213, 428
HincII	GTYRAC	1 cut(s)	1525
HindII	GTYRAC	1 cut(s)	1525
HindIII	AAGCTT	2 cut(s)	25, 156
HpaI	GTTAAC	1 cut(s)	1525
HpaII	CCGG	6 cut(s)	741, 902, 1679, 2069, 2180, 2228
HphI	GGTGA	3 cut(s)	425, 1856, 2074
Hpy166II	GTNNAC	7 cut(s)	227, 365, 1058, 1140, 1525, 1857, 2317
Hpy8I	GTNNAC	7 cut(s)	227, 365, 1058, 1140, 1525, 1857, 2317
HpyAV	CCTTC	7 cut(s)	123, 1177, 1715, 1838, 2051, 2110, 2263
HpyCH4III	ACNGT	3 cut(s)	379, 461, 712
HpyCH4IV	ACGT	1 cut(s)	307
HpyF10VI	GCNNNNNNNGC	9 cut(s)	44, 80, 284, 436, 1372, 1748, 2034, 2134, 2185
HpySE526I	ACGT	1 cut(s)	307
Hsp92II	CATG	6 cut(s)	176, 295, 978, 1504, 2004, 2221
HspAI	GCGC	3 cut(s)	128, 213, 428
Kpn2I	TCCGGA	1 cut(s)	2227
KspAI	GTTAAC	1 cut(s)	1525
Kzo9I	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
LguI	GCTCTTC	2 cut(s)	541, 2291
LmnI	GCTCC	6 cut(s)	138, 1363, 1496, 1707, 1987, 2025
Lsp1109I	GCAGC	3 cut(s)	137, 484, 542
LweI	GCATC	5 cut(s)	34, 721, 1565, 1729, 2197
MaeI	CTAG	2 cut(s)	135, 1949
MaeII	ACGT	1 cut(s)	307
MaeIII	GTNAC	2 cut(s)	1844, 2018
MalI	GATC	6 cut(s)	393, 765, 900, 1308, 1589, 1894
MboI	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
MfeI	CAATTG	1 cut(s)	606
MflI	RGATCY	1 cut(s)	1306
MhlI	GDGCHC	7 cut(s)	261, 289, 577, 741, 969, 1457, 1948
MlyI	GAGTC	8 cut(s)	611, 979, 1103, 1145, 1222, 1283, 1832, 1942
MmeI	TCCRAC	1 cut(s)	1216
MroI	TCCGGA	1 cut(s)	2227
MroXI	GAANNNNTTC	3 cut(s)	486, 953, 1437
MseI	TTAA	7 cut(s)	554, 792, 1013, 1313, 1524, 1694, 2132
MslI	CAYNNNNRTG	1 cut(s)	1129
MspA1I	CMGCKG	1 cut(s)	1802
MspI	CCGG	6 cut(s)	741, 902, 1679, 2069, 2180, 2228
MspR9I	CCNGG	3 cut(s)	526, 741, 1679
MunI	CAATTG	1 cut(s)	606
Mva1269I	GAATGC	1 cut(s)	1069
MvaI	CCWGG	1 cut(s)	526
MvnI	CGCG	2 cut(s)	130, 2208
MwoI	GCNNNNNNNGC	9 cut(s)	44, 80, 284, 436, 1372, 1748, 2034, 2134, 2185
NciI	CCSGG	2 cut(s)	741, 1679
NcoI	CCATGG	1 cut(s)	1500
NdeI	CATATG	1 cut(s)	928
NdeII	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
NlaIII	CATG	6 cut(s)	176, 295, 978, 1504, 2004, 2221
NlaIV	GGNNCC	5 cut(s)	739, 1087, 1200, 1498, 2232
NmuCI	GTSAC	1 cut(s)	1844
NruI	TCGCGA	1 cut(s)	2208
NsbI	TGCGCA	1 cut(s)	214
NspI	RCATGY	2 cut(s)	176, 978
NspV	TTCGAA	1 cut(s)	1293
PciSI	GCTCTTC	2 cut(s)	541, 2291
PcsI	WCGNNNNNNNCGW	1 cut(s)	2205
PctI	GAATGC	1 cut(s)	1069
PdmI	GAANNNNTTC	3 cut(s)	486, 953, 1437
PfeI	GAWTC	6 cut(s)	251, 482, 680, 1145, 1633, 2065
PkrI	GCNGC	5 cut(s)	37, 127, 499, 532, 2241
PleI	GAGTC	8 cut(s)	610, 979, 1102, 1144, 1221, 1282, 1832, 1941
PpsI	GAGTC	8 cut(s)	610, 979, 1102, 1144, 1221, 1282, 1832, 1941
PpuMI	RGGWCCY	1 cut(s)	1610
PshAI	GACNNNNGTC	1 cut(s)	772
Psp124BI	GAGCTC	1 cut(s)	1457
Psp5II	RGGWCCY	1 cut(s)	1610
Psp6I	CCWGG	1 cut(s)	524
PspEI	GGTNACC	1 cut(s)	1844
PspFI	CCCAGC	2 cut(s)	734, 1698
PspGI	CCWGG	1 cut(s)	524
PspN4I	GGNNCC	5 cut(s)	739, 1087, 1200, 1498, 2232
PspOMI	GGGCCC	1 cut(s)	737
PspPI	GGNCC	6 cut(s)	737, 738, 1085, 1102, 1610, 2047
PspPPI	RGGWCCY	1 cut(s)	1610
PstNI	CAGNNNCTG	2 cut(s)	997, 2128
PsuI	RGATCY	1 cut(s)	1306
PvuII	CAGCTG	1 cut(s)	1802
RruI	TCGCGA	1 cut(s)	2208
RsaI	GTAC	3 cut(s)	376, 714, 1757
RsaNI	GTAC	3 cut(s)	375, 713, 1756
RseI	CAYNNNNRTG	1 cut(s)	1129
SacI	GAGCTC	1 cut(s)	1457
SapI	GCTCTTC	2 cut(s)	541, 2291
SaqAI	TTAA	7 cut(s)	554, 792, 1013, 1313, 1524, 1694, 2132
SatI	GCNGC	5 cut(s)	36, 126, 498, 531, 2240
Sau3AI	GATC	6 cut(s)	391, 763, 898, 1306, 1587, 1892
Sau96I	GGNCC	6 cut(s)	737, 738, 1085, 1102, 1610, 2047
SchI	GAGTC	8 cut(s)	611, 979, 1103, 1145, 1222, 1283, 1832, 1942
ScrFI	CCNGG	3 cut(s)	526, 741, 1679
SduI	GDGCHC	7 cut(s)	261, 289, 577, 741, 969, 1457, 1948
SfaNI	GCATC	5 cut(s)	34, 721, 1565, 1729, 2197
SfuI	TTCGAA	1 cut(s)	1293
SinI	GGWCC	4 cut(s)	1085, 1102, 1610, 2047
SmiMI	CAYNNNNRTG	1 cut(s)	1129
SmlI	CTYRAG	4 cut(s)	368, 1605, 2051, 2257
SmoI	CTYRAG	4 cut(s)	368, 1605, 2051, 2257
SsiI	CCGC	4 cut(s)	36, 595, 1835, 2240
SspI	AATATT	1 cut(s)	108
SspMI	CTAG	2 cut(s)	135, 1949
SstI	GAGCTC	1 cut(s)	1457
StyD4I	CCNGG	3 cut(s)	524, 739, 1677
StyI	CCWWGG	2 cut(s)	134, 1500
TaaI	ACNGT	3 cut(s)	379, 461, 712
TaiI	ACGT	1 cut(s)	310
TaqI	TCGA	6 cut(s)	766, 1293, 1708, 1925, 1931, 2199
TaqII	GACCGA	1 cut(s)	2185
TatI	WGTACW	2 cut(s)	712, 1755
TauI	GCSGC	2 cut(s)	38, 2242
TfiI	GAWTC	6 cut(s)	251, 482, 680, 1145, 1633, 2065
Tru1I	TTAA	7 cut(s)	554, 792, 1013, 1313, 1524, 1694, 2132
Tru9I	TTAA	7 cut(s)	554, 792, 1013, 1313, 1524, 1694, 2132
TscAI	CASTG	6 cut(s)	715, 964, 1147, 1819, 1948, 2327
TseFI	GTSAC	1 cut(s)	1844
TseI	GCWGC	3 cut(s)	125, 497, 530
Tsp45I	GTSAC	1 cut(s)	1844
TspDTI	ATGAA	7 cut(s)	156, 432, 479, 945, 1257, 1341, 1929
TspGWI	ACGGA	3 cut(s)	72, 2077, 2132
TspRI	CASTG	6 cut(s)	715, 964, 1147, 1819, 1948, 2327
VpaK11BI	GGWCC	4 cut(s)	1085, 1102, 1610, 2047
XagI	CCTNNNNNAGG	1 cut(s)	523
XapI	RAATTY	3 cut(s)	266, 778, 1927
XceI	RCATGY	2 cut(s)	176, 978
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1408
XmaJI	CCTAGG	1 cut(s)	134
XmnI	GAANNNNTTC	3 cut(s)	486, 953, 1437
XspI	CTAG	2 cut(s)	135, 1949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.