RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530 |
| fragaria_vesca | FvH4_4g24030 FvH4_4g24030 FvH4_4g24030 |
| malus_domestica | MD16G1116600.v1.1 |
| prunus_persica | Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 |
| pyrus_communis | pycom13g10100 pycom16g09990 |
| rosa_chinensis | RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381 |
| rosa_laevigata | RLG00000002065 RLG00000002066 RLG00000006953 |
| rosa_multiflora | Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00237030 Rroxscaffold_5G00372450 |
| rosa_rugosa | Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800 |
| rosa_samantha | Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600 |
| rosa_wichuraiana | Rw4G026200 Rw7G029570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 73 |
| AcsI | RAATTY | 1 cut(s) | 338 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 119 |
| AgsI | TTSAA | 3 cut(s) | 101, 161, 349 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 232, 264 |
| AluBI | AGCT | 3 cut(s) | 164, 187, 327 |
| AluI | AGCT | 3 cut(s) | 164, 187, 327 |
| ApoI | RAATTY | 1 cut(s) | 338 |
| AspLEI | GCGC | 1 cut(s) | 125 |
| AspS9I | GGNCC | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 308 |
| AvaII | GGWCC | 1 cut(s) | 62 |
| BfaI | CTAG | 1 cut(s) | 219 |
| BfuAI | ACCTGC | 1 cut(s) | 73 |
| Bme18I | GGWCC | 1 cut(s) | 62 |
| BmgT120I | GGNCC | 1 cut(s) | 62 |
| BmrI | ACTGGG | 1 cut(s) | 45 |
| BmsI | GCATC | 1 cut(s) | 181 |
| BmuI | ACTGGG | 1 cut(s) | 45 |
| BpmI | CTGGAG | 1 cut(s) | 50 |
| BsaWI | WCCGGW | 1 cut(s) | 293 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 119 |
| Bse1I | ACTGG | 2 cut(s) | 51, 255 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BseNI | ACTGG | 2 cut(s) | 51, 255 |
| BsiSI | CCGG | 1 cut(s) | 294 |
| BslFI | GGGAC | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 119 |
| BsmFI | GGGAC | 1 cut(s) | 122 |
| BsmI | GAATGC | 1 cut(s) | 222 |
| Bsp143I | GATC | 1 cut(s) | 39 |
| BspMI | ACCTGC | 1 cut(s) | 73 |
| BsrI | ACTGG | 2 cut(s) | 51, 255 |
| BssMI | GATC | 1 cut(s) | 39 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 131 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 127, 185 |
| BstHHI | GCGC | 1 cut(s) | 125 |
| BstKTI | GATC | 1 cut(s) | 42 |
| BstMBI | GATC | 1 cut(s) | 39 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 131, 200 |
| BtsIMutI | CAGTG | 1 cut(s) | 271 |
| BveI | ACCTGC | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 127, 185 |
| CfoI | GCGC | 1 cut(s) | 125 |
| Cfr13I | GGNCC | 1 cut(s) | 62 |
| CviAII | CATG | 3 cut(s) | 59, 200, 306 |
| CviJI | RGCY | 9 cut(s) | 74, 107, 112, 129, 164, 187, 254, 327, 345 |
| CviKI_1 | RGCY | 9 cut(s) | 74, 107, 112, 129, 164, 187, 254, 327, 345 |
| DpnI | GATC | 1 cut(s) | 41 |
| DpnII | GATC | 1 cut(s) | 39 |
| Eco47I | GGWCC | 1 cut(s) | 62 |
| FaeI | CATG | 3 cut(s) | 62, 203, 309 |
| FaiI | YATR | 5 cut(s) | 60, 201, 208, 307, 324 |
| FaqI | GGGAC | 1 cut(s) | 122 |
| FatI | CATG | 3 cut(s) | 58, 199, 305 |
| FspBI | CTAG | 1 cut(s) | 219 |
| GlaI | GCGC | 1 cut(s) | 124 |
| GsuI | CTGGAG | 1 cut(s) | 50 |
| HapII | CCGG | 1 cut(s) | 294 |
| HhaI | GCGC | 1 cut(s) | 125 |
| Hin1II | CATG | 3 cut(s) | 62, 203, 309 |
| Hin6I | GCGC | 1 cut(s) | 123 |
| HinP1I | GCGC | 1 cut(s) | 123 |
| HindIII | AAGCTT | 1 cut(s) | 185 |
| HinfI | GANTC | 2 cut(s) | 85, 290 |
| HpaII | CCGG | 1 cut(s) | 294 |
| HphI | GGTGA | 1 cut(s) | 308 |
| Hpy166II | GTNNAC | 1 cut(s) | 299 |
| Hpy188I | TCNGA | 1 cut(s) | 84 |
| Hpy8I | GTNNAC | 1 cut(s) | 299 |
| HpyAV | CCTTC | 1 cut(s) | 290 |
| HpyCH4V | TGCA | 3 cut(s) | 183, 274, 287 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 131, 200 |
| Hsp92II | CATG | 3 cut(s) | 62, 203, 309 |
| HspAI | GCGC | 1 cut(s) | 123 |
| Kzo9I | GATC | 1 cut(s) | 39 |
| LpnPI | CCDG | 7 cut(s) | 14, 64, 78, 106, 144, 268, 307 |
| LweI | GCATC | 1 cut(s) | 181 |
| MaeI | CTAG | 1 cut(s) | 219 |
| MalI | GATC | 1 cut(s) | 41 |
| MboI | GATC | 1 cut(s) | 39 |
| MboII | GAAGA | 3 cut(s) | 113, 149, 236 |
| MluCI | AATT | 3 cut(s) | 18, 117, 338 |
| MlyI | GAGTC | 1 cut(s) | 284 |
| MnlI | CCTC | 3 cut(s) | 25, 206, 238 |
| MseI | TTAA | 2 cut(s) | 116, 146 |
| MspI | CCGG | 1 cut(s) | 294 |
| Mva1269I | GAATGC | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 131, 200 |
| NdeII | GATC | 1 cut(s) | 39 |
| NlaIII | CATG | 3 cut(s) | 62, 203, 309 |
| PctI | GAATGC | 1 cut(s) | 222 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PleI | GAGTC | 1 cut(s) | 284 |
| PpsI | GAGTC | 1 cut(s) | 284 |
| PspPI | GGNCC | 1 cut(s) | 62 |
| SaqAI | TTAA | 2 cut(s) | 116, 146 |
| Sau3AI | GATC | 1 cut(s) | 39 |
| Sau96I | GGNCC | 1 cut(s) | 62 |
| SchI | GAGTC | 1 cut(s) | 284 |
| SetI | ASST | 5 cut(s) | 67, 166, 189, 216, 329 |
| SfaNI | GCATC | 1 cut(s) | 181 |
| SinI | GGWCC | 1 cut(s) | 62 |
| Sse9I | AATT | 3 cut(s) | 18, 117, 338 |
| SspMI | CTAG | 1 cut(s) | 219 |
| TasI | AATT | 3 cut(s) | 18, 117, 338 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| Tru1I | TTAA | 2 cut(s) | 116, 146 |
| Tru9I | TTAA | 2 cut(s) | 116, 146 |
| TscAI | CASTG | 1 cut(s) | 271 |
| TspDTI | ATGAA | 1 cut(s) | 294 |
| TspRI | CASTG | 1 cut(s) | 271 |
| VpaK11BI | GGWCC | 1 cut(s) | 62 |
| XapI | RAATTY | 1 cut(s) | 338 |
| XspI | CTAG | 1 cut(s) | 219 |