Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001789

Physical Location & Seq

Genomic Coordinates Forward (+)

26305582 .. 26312317

Gene Structure 6736 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g24030.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGGATATTACGGAGGTCGAAGAAAGCTTGTTTGCTGCAAGTGATGCCAAGCTGCATGGAGAAATGTGCAAGATCCTCTCTGCAAGTTATTGCAGAGTAATGTCAATTTTTCCTTCGTTGGAAGCGGCTCGGCCTAGGAGCAAATCTGGCATCCAAGCTTTATGTTCATTGCATGTAGGGCTTGAAAAGGCTAAGAATGTGCTTCAACACTGCTCAGAATGTAGTAAACTTTACTTGGCTATAACTGGGGATTCTGTGCTCTCAAAATTTGAGAAGGCTAGAATTGCTCTCATGGATAGTCTCAGGCGTGTTGAAGATATTGTTCCGCAATCTATTGGTTGTCAGATTCAAGAGGTTCTTAGTGAACTTGAATGTACTGTCTTCTCACTTGATCCCTTAGAGAAGCAAGTTGGTGATGACATAATTGGGCTGCTTCAGCAAGGGAGAAAATTTGACAACTGCAGTGACATTAACGAGCTAGAATCTTTTCATCAGGCTGCTATCAGGCTTGGTATAACCTCTTCTACGGCAGCTCTTAGAGAGAGAAGAGCACTAAAGAAACTCATCCAGAGAGCCCGTGCTGAGGAAGATAAGCGGAAGGAGTCAATCGTGGCTTATTTATTGCATCTTATGAGAAAGTACTCTAAGTTGTTTAGAAGTGATTTCTCAGATGATAATGATTCACAGGGCTCTGCACCCTGTTCTCCCACTGTTCAAGGTTCTAATGAGGATACTGGTTCTGGGGGTAATGGTCAAGCATTTGACAGACAACTGTCAAAAGTCAGTTCTTTTAATTTCAAGACTTCTTTCAGTTACAAGTCGAACACTAGAAAATCAGGTCAGATGGCTCTTCCACCTGAAGAATTGAGATGTCCAATATCATTGCAGCTCATGTATGACCCGGTGATCATTGCTTCTGGTCAAACCTATGAAAGGATTTGCATTGAAAAATGGTTTAGCGATGGGCATAATACCTGCCCAAAGACTCAACAGAAGCTGAGTCATCTTTCTTTAACTCCCAATTATTGTGTCAAGGGTCTCATTTCTAGTTGGTGCGAACAGAATGGAATTTCTGTTCCTGATGGCCCACCAGAGTCGCTTGACCTCAACTACTGGAGGCTGGCATTTTCTGAGTCTGAGTCTGAGTCCACTAATTCAAAATCTATGGGTAGTATTGGCTCTTGCAAGTTGAAGGGTGCTAAAGTGGTTCCTATAGAGGAGAGTGGTACAATAGAGGAGGATGTTGGAAATGAAACGGAAGAGGTATCTCCAGCATCAGAAGAATCTGAGCATGATGCTTTTGAGAGTTATCAGGATCTTTTAACTGTCTTGAACGAAGGGGAGGACTTCAGGAAGAAGTGCAAAGTGGTGGAGCAAATAAGGCTCCTGCTGAAGGATGATGAGGAAGCCAGGATGTACATGGGGGCAAATGGATTTGTTGAAGCACTTCTACAATTTCTGAACTCAGCTGTGCGTGAAGCAAATGTTTTCGCTCAGGAAAGTGGAGCTATGGCTCTATTCAATCTTGCTGTTAATAATAACAGAAATAAGGAGACAATGCTAGCGTCCAGAGTAATATCATTGCTGGAAGAAATGATCTCCTATCCTAGTTCTCATGGACCTGCAACAGCCCTTTATCTGAATCTCTCCTGCCTTGAAGAAGCCAAGCCTTTAATCGGCACAAGCCCTGCTGTCCCTTTCTTAACCCAACTCCTTCAAACCAATGCTGGAACTCAATGCAAGCTTGATGCTCTCCATGCTCTATACAACCTTTCTAGCATTCCCTCAAACATTCCGAATCTTCTTTCAGCCAGTATCATCAACGGTTTGCAATCCCTTCTTGCAGACTCTAGTGAAAATTCATGGACAGAAAAATGTATAGCTGTTTTGATAAATTTGGCTTCAAGTTATTCGGCAAAAGAGGAAATTATTTCAAATACGAAGCTTATCAGTGCACTAGCAGCACTTCTGGAGGCTGAGCAACCCATTGAGCAGGAACAAGCCGTCTCGTGTCTCTATATGTTGTGTAATGGGAATGAGAAATGCAGTCAGATGGTCCTGCAGGAAGGGGTAATTCCTGCATTGGTGTCGATGTCCGTTAATGGAACATCAAGAGGAAAAGACAAAGCTCAGAAGCTGTTAATGTTGTTTCGTGAGCAGAGACAAAGAGACCAACCACCTCCGGAGGAGAAGGTGCAACTCTGTGAACCAAATGACAGCCATCCCGCTCCGCCCCCAGAATCAAAGCCGCTATGCAAATCCATCTCAAAAAGAAAGATGGGCAAAGCTTTTAGCTTCTTATGGAAGAGCAAAAGCTATTCTGTTTACCAGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070647 GO:0070696 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KAP U-box

Protein Analysis

779

Amino Acids

85.87

Weight (kDa)

5.35

Isoelectric Point (pI)

50.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	210 - 279	3.6e-19	U-box domain
ARM_PUB	PF25598	376 - 646	1.9e-14	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	483 - 631	8.1e-12	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24330 AT1G24330 AT1G27910 AT1G67530 AT1G67530 AT1G67530 AT1G67530
fragaria_vesca	FvH4_4g24030 FvH4_4g24030 FvH4_4g24030
malus_domestica	MD16G1116600.v1.1
prunus_persica	Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1 Prupe.1G229500_v2.0.a1
pyrus_communis	pycom13g10100 pycom16g09990
rosa_chinensis	RchiOBHm_Chr4g0430741 RchiOBHm_Chr7g0222371 RchiOBHm_Chr7g0222381
rosa_laevigata	RLG00000002065 RLG00000002066 RLG00000006953
rosa_multiflora	Rmu_co8254499.1_g000001 Rmu_sc0008769.1_g000015 Rmu_sc0030350.1_g000001 Rmu_sc0034402.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237030 Rroxscaffold_5G00372450
rosa_rugosa	Rorug04G0245300 Rorug04G0245300 Rorug04G0245400 Rorug04G0245500 Rorug07G0207800
rosa_samantha	Rh4AG301500 Rh4BG309400 Rh4CG326100 Rh4DG306400 Rh7AG350300 Rh7BG340600 Rh7BG340700 Rh7CG367800 Rh7DG346500 Rh7DG346600
rosa_wichuraiana	Rw4G026200 Rw7G029570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	983, 1630
AccBSI	CCGCTC	1 cut(s)	2228
AccIII	TCCGGA	1 cut(s)	2182
AciI	CCGC	6 cut(s)	125, 326, 595, 2226, 2231, 2249
AclWI	GGATC	3 cut(s)	67, 386, 1323
AcsI	RAATTY	5 cut(s)	266, 449, 1068, 1858, 1894
AcuI	CTGAAG	4 cut(s)	419, 879, 1333, 1412
AfaI	GTAC	4 cut(s)	376, 641, 1228, 1418
AfiI	CCNNNNNNNGG	4 cut(s)	583, 933, 1393, 1676
AjnI	CCWGG	1 cut(s)	1409
AloI	GAACNNNNNNTCC	2 cut(s)	1059, 1091
Alw21I	GWGCWC	3 cut(s)	261, 553, 1957
Alw26I	GTCTC	7 cut(s)	305, 1043, 1547, 2011, 2018, 2155, 2163
Alw44I	GTGCAC	1 cut(s)	1953
AlwI	GGATC	3 cut(s)	67, 386, 1323
AlwNI	CAGNNNCTG	2 cut(s)	997, 2137
Aor13HI	TCCGGA	1 cut(s)	2182
AoxI	GGCC	2 cut(s)	131, 1084
ApaLI	GTGCAC	1 cut(s)	1953
ApeKI	GCWGC	7 cut(s)	35, 52, 430, 497, 530, 886, 1961
ApoI	RAATTY	5 cut(s)	266, 449, 1068, 1858, 1894
Asp700I	GAANNNNTTC	2 cut(s)	486, 1446
AspA2I	CCTAGG	1 cut(s)	134
AspS9I	GGNCC	3 cut(s)	1085, 1619, 2056
AsuC2I	CCSGG	1 cut(s)	902
AsuHPI	GGTGA	2 cut(s)	425, 916
AsuNHI	GCTAGC	1 cut(s)	1561
AvaII	GGWCC	2 cut(s)	1619, 2056
AvrII	CCTAGG	1 cut(s)	134
BaeGI	GKGCMC	1 cut(s)	1957
BanII	GRGCYC	2 cut(s)	577, 692
BarI	GAAGNNNNNNTAC	4 cut(s)	505, 537, 1434, 1466
BauI	CACGAG	1 cut(s)	2008
BbsI	GAAGAC	1 cut(s)	373
Bbv12I	GWGCWC	3 cut(s)	261, 553, 1957
BbvCI	CCTCAGC	1 cut(s)	582
BbvI	GCAGC	7 cut(s)	22, 39, 417, 484, 542, 898, 1973
BccI	CCATC	7 cut(s)	838, 956, 1076, 2047, 2229, 2270, 2272
BceAI	ACGGC	2 cut(s)	543, 1988
BcgI	CGANNNNNNTGC	2 cut(s)	2070, 2104
BciT130I	CCWGG	1 cut(s)	1411
BciVI	GTATCC	1 cut(s)	724
BclI	TGATCA	1 cut(s)	906
BcnI	CCSGG	1 cut(s)	902
BcoDI	GTCTC	7 cut(s)	305, 1043, 1547, 2011, 2018, 2155, 2163
BfmI	CTRYAG	3 cut(s)	460, 1212, 2060
BfuAI	ACCTGC	2 cut(s)	983, 1630
BfuI	GTATCC	1 cut(s)	724
BisI	GCNGC	9 cut(s)	36, 53, 126, 431, 498, 531, 887, 1962, 2249
BlnI	CCTAGG	1 cut(s)	134
BlpI	GCTNAGC	1 cut(s)	1977
BlsI	GCNGC	9 cut(s)	37, 54, 127, 432, 499, 532, 888, 1963, 2250
BmcAI	AGTACT	1 cut(s)	641
Bme1390I	CCNGG	2 cut(s)	902, 1411
Bme18I	GGWCC	2 cut(s)	1619, 2056
BmgT120I	GGNCC	3 cut(s)	1085, 1619, 2056
BmiI	GGNNCC	2 cut(s)	1209, 1385
BmrFI	CCNGG	2 cut(s)	902, 1411
BmrI	ACTGGG	1 cut(s)	255
BmsI	GCATC	6 cut(s)	34, 159, 634, 1283, 1285, 1738
BmtI	GCTAGC	1 cut(s)	1565
BmuI	ACTGGG	1 cut(s)	255
BoxI	GACNNNNGTC	1 cut(s)	772
BpiI	GAAGAC	1 cut(s)	373
BpmI	CTGGAG	3 cut(s)	1135, 1254, 1991
Bpu10I	CCTNAGC	2 cut(s)	582, 1494
Bpu1102I	GCTNAGC	1 cut(s)	1977
BpuMI	CCSGG	1 cut(s)	902
BsaI	GGTCTC	2 cut(s)	1043, 2163
BsaJI	CCNNGG	1 cut(s)	134
BsaWI	WCCGGW	1 cut(s)	2182
Bsc4I	CCNNNNNNNGG	4 cut(s)	583, 933, 1393, 1676
Bse1I	ACTGG	5 cut(s)	250, 739, 1118, 1812, 2329
Bse3DI	GCAATG	4 cut(s)	167, 881, 909, 1580
BseAI	TCCGGA	1 cut(s)	2182
BseBI	CCWGG	1 cut(s)	1411
BseDI	CCNNGG	1 cut(s)	134
BseGI	GGATG	6 cut(s)	150, 564, 1246, 1402, 1419, 2221
BseLI	CCNNNNNNNGG	4 cut(s)	583, 933, 1393, 1676
BseMI	GCAATG	4 cut(s)	167, 881, 909, 1580
BseNI	ACTGG	5 cut(s)	250, 739, 1118, 1812, 2329
BseRI	GAGGAG	3 cut(s)	1232, 1250, 2201
BseSI	GKGCMC	1 cut(s)	1957
BseXI	GCAGC	7 cut(s)	22, 39, 417, 484, 542, 898, 1973
BsgI	GTGCAG	1 cut(s)	678
BshFI	GGCC	2 cut(s)	133, 1086
BsiHKAI	GWGCWC	3 cut(s)	261, 553, 1957
BsiSI	CCGG	2 cut(s)	902, 2183
BslFI	GGGAC	1 cut(s)	1679
BslI	CCNNNNNNNGG	4 cut(s)	583, 933, 1393, 1676
BsmAI	GTCTC	7 cut(s)	305, 1043, 1547, 2011, 2018, 2155, 2163
BsmBI	CGTCTC	1 cut(s)	2011
BsmFI	GGGAC	1 cut(s)	1679
BsmI	GAATGC	1 cut(s)	1779
BsnI	GGCC	2 cut(s)	133, 1086
Bso31I	GGTCTC	2 cut(s)	1043, 2163
Bsp1286I	GDGCHC	5 cut(s)	261, 553, 577, 692, 1957
Bsp13I	TCCGGA	1 cut(s)	2182
Bsp1407I	TGTACA	1 cut(s)	1416
Bsp143I	GATC	5 cut(s)	72, 391, 906, 1315, 1596
Bsp1720I	GCTNAGC	1 cut(s)	1977
BspACI	CCGC	6 cut(s)	125, 326, 595, 2226, 2231, 2249
BspANI	GGCC	2 cut(s)	133, 1086
BspEI	TCCGGA	1 cut(s)	2182
BspLI	GGNNCC	2 cut(s)	1209, 1385
BspMAI	CTGCAG	2 cut(s)	464, 2064
BspMI	ACCTGC	2 cut(s)	983, 1630
BspOI	GCTAGC	1 cut(s)	1565
BspPI	GGATC	3 cut(s)	67, 386, 1323
BspQI	GCTCTTC	3 cut(s)	541, 855, 2300
BspTNI	GGTCTC	2 cut(s)	1043, 2163
BsrBI	CCGCTC	1 cut(s)	2228
BsrDI	GCAATG	4 cut(s)	167, 881, 909, 1580
BsrGI	TGTACA	1 cut(s)	1416
BsrI	ACTGG	5 cut(s)	250, 739, 1118, 1812, 2329
BssECI	CCNNGG	1 cut(s)	134
BssMI	GATC	5 cut(s)	72, 391, 906, 1315, 1596
BssSI	CACGAG	1 cut(s)	2008
BssT1I	CCWWGG	1 cut(s)	134
Bst2BI	CACGAG	1 cut(s)	2008
Bst2UI	CCWGG	1 cut(s)	1411
Bst4CI	ACNGT	5 cut(s)	379, 712, 774, 1327, 1826
Bst6I	CTCTTC	5 cut(s)	526, 541, 855, 1254, 2300
BstAPI	GCANNNNNTGC	1 cut(s)	44
BstAUI	TGTACA	1 cut(s)	1416
BstC8I	GCNNGC	3 cut(s)	1122, 1563, 1742
BstENI	CCTNNNNNAGG	2 cut(s)	931, 1391
BstF5I	GGATG	6 cut(s)	150, 564, 1246, 1402, 1419, 2221
BstKTI	GATC	5 cut(s)	75, 394, 909, 1318, 1599
BstMAI	GTCTC	7 cut(s)	305, 1043, 1547, 2011, 2018, 2155, 2163
BstMBI	GATC	5 cut(s)	72, 391, 906, 1315, 1596
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 147, 178, 284, 436, 1381, 1757, 1961
BstNI	CCWGG	1 cut(s)	1411
BstNSI	RCATGY	1 cut(s)	176
BstPAI	GACNNNNGTC	1 cut(s)	772
BstSCI	CCNGG	2 cut(s)	900, 1409
BstSFI	CTRYAG	3 cut(s)	460, 1212, 2060
BstSLI	GKGCMC	1 cut(s)	1957
BstV1I	GCAGC	7 cut(s)	22, 39, 417, 484, 542, 898, 1973
BstV2I	GAAGAC	1 cut(s)	373
BstX2I	RGATCY	2 cut(s)	72, 1315
BstYI	RGATCY	2 cut(s)	72, 1315
BsuI	GTATCC	1 cut(s)	724
BsuRI	GGCC	2 cut(s)	133, 1086
BtgZI	GCGATG	1 cut(s)	975
BtsCI	GGATG	6 cut(s)	150, 564, 1246, 1402, 1419, 2221
BtsI	GCAGTG	2 cut(s)	208, 469
BtsIMutI	CAGTG	5 cut(s)	208, 469, 708, 1957, 2336
BveI	ACCTGC	2 cut(s)	983, 1630
Cac8I	GCNNGC	3 cut(s)	1122, 1563, 1742
CaiI	CAGNNNCTG	2 cut(s)	997, 2137
Cfr13I	GGNCC	3 cut(s)	1085, 1619, 2056
CseI	GACGC	1 cut(s)	1554
Csp6I	GTAC	4 cut(s)	375, 640, 1227, 1417
CviAII	CATG	9 cut(s)	56, 173, 292, 892, 1292, 1420, 1616, 1757, 1863
CviQI	GTAC	4 cut(s)	375, 640, 1227, 1417
DpnI	GATC	5 cut(s)	74, 393, 908, 1317, 1598
DpnII	GATC	5 cut(s)	72, 391, 906, 1315, 1596
Eam1104I	CTCTTC	5 cut(s)	526, 541, 855, 1254, 2300
EarI	CTCTTC	5 cut(s)	526, 541, 855, 1254, 2300
EciI	GGCGGA	1 cut(s)	2220
Eco130I	CCWWGG	1 cut(s)	134
Eco24I	GRGCYC	2 cut(s)	577, 692
Eco31I	GGTCTC	2 cut(s)	1043, 2163
Eco47I	GGWCC	2 cut(s)	1619, 2056
Eco57I	CTGAAG	4 cut(s)	419, 879, 1333, 1412
EcoNI	CCTNNNNNAGG	2 cut(s)	931, 1391
EcoRII	CCWGG	1 cut(s)	1409
EcoT14I	CCWWGG	1 cut(s)	134
EcoT38I	GRGCYC	2 cut(s)	577, 692
ErhI	CCWWGG	1 cut(s)	134
Esp3I	CGTCTC	1 cut(s)	2011
FaeI	CATG	9 cut(s)	59, 176, 295, 895, 1295, 1423, 1619, 1760, 1866
FalI	AAGNNNNNCTT	2 cut(s)	342, 374
FaqI	GGGAC	1 cut(s)	1679
FatI	CATG	9 cut(s)	55, 172, 291, 891, 1291, 1419, 1615, 1756, 1862
FauI	CCCGC	1 cut(s)	2233
FbaI	TGATCA	1 cut(s)	906
Fnu4HI	GCNGC	9 cut(s)	36, 53, 126, 431, 498, 531, 887, 1962, 2249
FokI	GGATG	6 cut(s)	137, 551, 1253, 1409, 1426, 2208
FriOI	GRGCYC	2 cut(s)	577, 692
Fsp4HI	GCNGC	9 cut(s)	36, 53, 126, 431, 498, 531, 887, 1962, 2249
GluI	GCNGC	9 cut(s)	36, 53, 126, 431, 498, 531, 887, 1962, 2249
GsuI	CTGGAG	3 cut(s)	1135, 1254, 1991
HaeIII	GGCC	2 cut(s)	133, 1086
HapII	CCGG	2 cut(s)	902, 2183
HgaI	GACGC	1 cut(s)	1554
Hin1II	CATG	9 cut(s)	59, 176, 295, 895, 1295, 1423, 1619, 1760, 1866
HindIII	AAGCTT	5 cut(s)	25, 156, 1742, 1943, 2286
HpaII	CCGG	2 cut(s)	902, 2183
HphI	GGTGA	2 cut(s)	425, 916
Hpy166II	GTNNAC	6 cut(s)	227, 365, 1149, 1955, 2207, 2326
Hpy8I	GTNNAC	6 cut(s)	227, 365, 1149, 1955, 2207, 2326
HpyCH4III	ACNGT	5 cut(s)	379, 712, 774, 1327, 1826
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 147, 178, 284, 436, 1381, 1757, 1961
Hsp92II	CATG	9 cut(s)	59, 176, 295, 895, 1295, 1423, 1619, 1760, 1866
Kpn2I	TCCGGA	1 cut(s)	2182
Ksp22I	TGATCA	1 cut(s)	906
Kzo9I	GATC	5 cut(s)	72, 391, 906, 1315, 1596
LguI	GCTCTTC	3 cut(s)	541, 855, 2300
LmnI	GCTCC	5 cut(s)	138, 1372, 1389, 1505, 2233
Lsp1109I	GCAGC	7 cut(s)	22, 39, 417, 484, 542, 898, 1973
LweI	GCATC	6 cut(s)	34, 159, 634, 1283, 1285, 1738
MaeIII	GTNAC	2 cut(s)	464, 812
MalI	GATC	5 cut(s)	74, 393, 908, 1317, 1598
MbiI	CCGCTC	1 cut(s)	2228
MboI	GATC	5 cut(s)	72, 391, 906, 1315, 1596
MflI	RGATCY	2 cut(s)	72, 1315
MhlI	GDGCHC	5 cut(s)	261, 553, 577, 692, 1957
MlyI	GAGTC	8 cut(s)	611, 979, 1009, 1103, 1142, 1148, 1154, 1841
MmeI	TCCRAC	2 cut(s)	99, 1225
MroI	TCCGGA	1 cut(s)	2182
MroXI	GAANNNNTTC	2 cut(s)	486, 1446
MseI	TTAA	9 cut(s)	471, 792, 1013, 1322, 1533, 1673, 1703, 2100, 2141
MspA1I	CMGCKG	1 cut(s)	1469
MspI	CCGG	2 cut(s)	902, 2183
MspR9I	CCNGG	2 cut(s)	902, 1411
Mva1269I	GAATGC	1 cut(s)	1779
MvaI	CCWGG	1 cut(s)	1411
MwoI	GCNNNNNNNGC	8 cut(s)	44, 147, 178, 284, 436, 1381, 1757, 1961
NciI	CCSGG	1 cut(s)	902
NdeII	GATC	5 cut(s)	72, 391, 906, 1315, 1596
NheI	GCTAGC	1 cut(s)	1561
NlaIII	CATG	9 cut(s)	59, 176, 295, 895, 1295, 1423, 1619, 1760, 1866
NlaIV	GGNNCC	2 cut(s)	1209, 1385
NmeAIII	GCCGAG	1 cut(s)	109
NmuCI	GTSAC	1 cut(s)	464
NspI	RCATGY	1 cut(s)	176
PciSI	GCTCTTC	3 cut(s)	541, 855, 2300
PctI	GAATGC	1 cut(s)	1779
PdmI	GAANNNNTTC	2 cut(s)	486, 1446
PfeI	GAWTC	8 cut(s)	251, 346, 482, 680, 1283, 1642, 1798, 2240
PkrI	GCNGC	9 cut(s)	37, 54, 127, 432, 499, 532, 888, 1963, 2250
PleI	GAGTC	8 cut(s)	610, 979, 1008, 1102, 1141, 1147, 1153, 1841
PpsI	GAGTC	8 cut(s)	610, 979, 1008, 1102, 1141, 1147, 1153, 1841
PshAI	GACNNNNGTC	1 cut(s)	772
Psp6I	CCWGG	1 cut(s)	1409
PspGI	CCWGG	1 cut(s)	1409
PspN4I	GGNNCC	2 cut(s)	1209, 1385
PspPI	GGNCC	3 cut(s)	1085, 1619, 2056
PstI	CTGCAG	2 cut(s)	464, 2064
PstNI	CAGNNNCTG	2 cut(s)	997, 2137
PsuI	RGATCY	2 cut(s)	72, 1315
PvuII	CAGCTG	1 cut(s)	1469
RsaI	GTAC	4 cut(s)	376, 641, 1228, 1418
RsaNI	GTAC	4 cut(s)	375, 640, 1227, 1417
SapI	GCTCTTC	3 cut(s)	541, 855, 2300
SaqAI	TTAA	9 cut(s)	471, 792, 1013, 1322, 1533, 1673, 1703, 2100, 2141
SatI	GCNGC	9 cut(s)	36, 53, 126, 431, 498, 531, 887, 1962, 2249
Sau3AI	GATC	5 cut(s)	72, 391, 906, 1315, 1596
Sau96I	GGNCC	3 cut(s)	1085, 1619, 2056
SbfI	CCTGCAGG	1 cut(s)	2064
ScaI	AGTACT	1 cut(s)	641
SchI	GAGTC	8 cut(s)	611, 979, 1009, 1103, 1142, 1148, 1154, 1841
ScrFI	CCNGG	2 cut(s)	902, 1411
SdaI	CCTGCAGG	1 cut(s)	2064
SduI	GDGCHC	5 cut(s)	261, 553, 577, 692, 1957
SfaNI	GCATC	6 cut(s)	34, 159, 634, 1283, 1285, 1738
SfcI	CTRYAG	3 cut(s)	460, 1212, 2060
SinI	GGWCC	2 cut(s)	1619, 2056
Sse8387I	CCTGCAGG	1 cut(s)	2064
SsiI	CCGC	6 cut(s)	125, 326, 595, 2226, 2231, 2249
StyD4I	CCNGG	2 cut(s)	900, 1409
StyI	CCWWGG	1 cut(s)	134
TaaI	ACNGT	5 cut(s)	379, 712, 774, 1327, 1826
TaqI	TCGA	3 cut(s)	18, 821, 2090
TatI	WGTACW	3 cut(s)	374, 639, 1416
TauI	GCSGC	2 cut(s)	128, 2251
TfiI	GAWTC	8 cut(s)	251, 346, 482, 680, 1283, 1642, 1798, 2240
Tru1I	TTAA	9 cut(s)	471, 792, 1013, 1322, 1533, 1673, 1703, 2100, 2141
Tru9I	TTAA	9 cut(s)	471, 792, 1013, 1322, 1533, 1673, 1703, 2100, 2141
TscAI	CASTG	5 cut(s)	215, 469, 715, 1957, 2336
TseFI	GTSAC	1 cut(s)	464
TseI	GCWGC	7 cut(s)	35, 52, 430, 497, 530, 886, 1961
Tsp45I	GTSAC	1 cut(s)	464
TspDTI	ATGAA	5 cut(s)	156, 479, 945, 1266, 1851
TspGWI	ACGGA	3 cut(s)	26, 1271, 2086
TspRI	CASTG	5 cut(s)	215, 469, 715, 1957, 2336
VneI	GTGCAC	1 cut(s)	1953
VpaK11BI	GGWCC	2 cut(s)	1619, 2056
XagI	CCTNNNNNAGG	2 cut(s)	931, 1391
XapI	RAATTY	5 cut(s)	266, 449, 1068, 1858, 1894
XceI	RCATGY	1 cut(s)	176
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1417
XmaJI	CCTAGG	1 cut(s)	134
XmnI	GAANNNNTTC	2 cut(s)	486, 1446
ZrmI	AGTACT	1 cut(s)	641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.