Leucine-rich repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49750 AT3G19320 |
| fragaria_vesca | FvH4_2g05530 |
| malus_domestica | MD00G1014300.v1.1 MD05G1086700.v1.1 |
| prunus_persica | Prupe.8G131400_v2.0.a1 Prupe.8G131500_v2.0.a1 |
| pyrus_communis | pycom05g08610 pycom10g08130 |
| rosa_chinensis | RchiOBHm_Chr4g0387761 RchiOBHm_Chr6g0255781 RchiOBHm_Chr6g0255841 |
| rosa_laevigata | RLG00000014812 RLG00000014813 |
| rosa_multiflora | Rmu_sc0001163.1_g000027 Rmu_sc0001163.1_g000029 Rmu_sc0004935.1_g000023 |
| rosa_roxburghii | Rroxscaffold_7G00209620 Rroxscaffold_7G00209650 |
| rosa_rugosa | Rorug05G0561500 Rorug05G0561700 |
| rosa_samantha | Rh1AG424200 Rh4BG013200 Rh6AG079500 Rh6AG079800 Rh6BG072600 Rh6BG072700 Rh6CG070700 Rh6CG070800 Rh6DG068000 Rh6DG068100 |
| rosa_wichuraiana | Rw6G006850 Rw6G006880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 815 |
| AatII | GACGTC | 1 cut(s) | 819 |
| Acc36I | ACCTGC | 1 cut(s) | 181 |
| AccI | GTMKAC | 1 cut(s) | 1267 |
| AccII | CGCG | 1 cut(s) | 515 |
| AciI | CCGC | 5 cut(s) | 302, 305, 314, 335, 1321 |
| AclI | AACGTT | 1 cut(s) | 1176 |
| AclWI | GGATC | 5 cut(s) | 414, 556, 864, 877, 1404 |
| AcsI | RAATTY | 1 cut(s) | 665 |
| AcyI | GRCGYC | 1 cut(s) | 816 |
| AfaI | GTAC | 3 cut(s) | 950, 1001, 1073 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 906, 1385 |
| AflII | CTTAAG | 1 cut(s) | 428 |
| AgeI | ACCGGT | 1 cut(s) | 1058 |
| AgsI | TTSAA | 7 cut(s) | 9, 45, 63, 664, 730, 766, 1048 |
| AhlI | ACTAGT | 1 cut(s) | 719 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 893, 925 |
| AluBI | AGCT | 6 cut(s) | 280, 298, 363, 679, 853, 1424 |
| AluI | AGCT | 6 cut(s) | 280, 298, 363, 679, 853, 1424 |
| Alw21I | GWGCWC | 2 cut(s) | 365, 681 |
| Alw26I | GTCTC | 1 cut(s) | 1172 |
| AlwI | GGATC | 5 cut(s) | 414, 556, 864, 877, 1404 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 173, 641, 782 |
| Ama87I | CYCGRG | 1 cut(s) | 1020 |
| AoxI | GGCC | 1 cut(s) | 442 |
| ApoI | RAATTY | 1 cut(s) | 665 |
| AsiGI | ACCGGT | 1 cut(s) | 1058 |
| AspLEI | GCGC | 1 cut(s) | 482 |
| AspS9I | GGNCC | 5 cut(s) | 443, 917, 1061, 1211, 1465 |
| AsuC2I | CCSGG | 2 cut(s) | 1385, 1463 |
| AsuHPI | GGTGA | 4 cut(s) | 138, 144, 595, 883 |
| AvaI | CYCGRG | 1 cut(s) | 1020 |
| AvaII | GGWCC | 4 cut(s) | 917, 1061, 1211, 1465 |
| AxyI | CCTNAGG | 1 cut(s) | 792 |
| BamHI | GGATCC | 1 cut(s) | 869 |
| BanII | GRGCYC | 2 cut(s) | 365, 681 |
| Bbv12I | GWGCWC | 2 cut(s) | 365, 681 |
| BccI | CCATC | 5 cut(s) | 337, 614, 881, 1090, 1303 |
| BcnI | CCSGG | 2 cut(s) | 1385, 1463 |
| BcoDI | GTCTC | 1 cut(s) | 1172 |
| BcuI | ACTAGT | 1 cut(s) | 719 |
| BfaI | CTAG | 2 cut(s) | 410, 720 |
| BfmI | CTRYAG | 1 cut(s) | 174 |
| BfrI | CTTAAG | 1 cut(s) | 428 |
| BfuAI | ACCTGC | 1 cut(s) | 181 |
| BisI | GCNGC | 2 cut(s) | 305, 335 |
| BlsI | GCNGC | 2 cut(s) | 306, 336 |
| Bme1390I | CCNGG | 2 cut(s) | 1385, 1463 |
| Bme18I | GGWCC | 4 cut(s) | 917, 1061, 1211, 1465 |
| BmeT110I | CYCGRG | 1 cut(s) | 1020 |
| BmgT120I | GGNCC | 5 cut(s) | 443, 917, 1061, 1211, 1465 |
| BmiI | GGNNCC | 5 cut(s) | 159, 445, 871, 918, 1135 |
| BmrFI | CCNGG | 2 cut(s) | 1385, 1463 |
| BmsI | GCATC | 2 cut(s) | 511, 980 |
| BpuEI | CTTGAG | 3 cut(s) | 551, 562, 1410 |
| BpuMI | CCSGG | 2 cut(s) | 1385, 1463 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1374 |
| BsaHI | GRCGYC | 1 cut(s) | 816 |
| BsaJI | CCNNGG | 2 cut(s) | 466, 1384 |
| BsaWI | WCCGGW | 7 cut(s) | 68, 154, 986, 1058, 1141, 1393, 1438 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 605, 635 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 906, 1385 |
| Bse118I | RCCGGY | 2 cut(s) | 1058, 1467 |
| Bse1I | ACTGG | 2 cut(s) | 386, 523 |
| Bse21I | CCTNAGG | 1 cut(s) | 792 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1374 |
| BseDI | CCNNGG | 2 cut(s) | 466, 1384 |
| BseGI | GGATG | 2 cut(s) | 995, 1435 |
| BseJI | GATNNNNATC | 1 cut(s) | 1374 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 906, 1385 |
| BseMII | CTCAG | 4 cut(s) | 772, 789, 806, 1217 |
| BseNI | ACTGG | 2 cut(s) | 386, 523 |
| BseYI | CCCAGC | 1 cut(s) | 324 |
| BsgI | GTGCAG | 1 cut(s) | 294 |
| Bsh1236I | CGCG | 1 cut(s) | 515 |
| BshFI | GGCC | 1 cut(s) | 444 |
| BshTI | ACCGGT | 1 cut(s) | 1058 |
| BsiHKAI | GWGCWC | 2 cut(s) | 365, 681 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1020 |
| BslFI | GGGAC | 1 cut(s) | 1346 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 906, 1385 |
| BsmAI | GTCTC | 1 cut(s) | 1172 |
| BsmFI | GGGAC | 1 cut(s) | 1346 |
| BsnI | GGCC | 1 cut(s) | 444 |
| BsoBI | CYCGRG | 1 cut(s) | 1020 |
| Bsp1286I | GDGCHC | 2 cut(s) | 365, 681 |
| Bsp143I | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| Bsp68I | TCGCGA | 1 cut(s) | 515 |
| BspACI | CCGC | 5 cut(s) | 302, 305, 314, 335, 1321 |
| BspANI | GGCC | 1 cut(s) | 444 |
| BspCNI | CTCAG | 4 cut(s) | 771, 788, 805, 1216 |
| BspFNI | CGCG | 1 cut(s) | 515 |
| BspLI | GGNNCC | 5 cut(s) | 159, 445, 871, 918, 1135 |
| BspMAI | CTGCAG | 1 cut(s) | 178 |
| BspMI | ACCTGC | 1 cut(s) | 181 |
| BspPI | GGATC | 5 cut(s) | 414, 556, 864, 877, 1404 |
| BspTI | CTTAAG | 1 cut(s) | 428 |
| BsrFI | RCCGGY | 2 cut(s) | 1058, 1467 |
| BsrI | ACTGG | 2 cut(s) | 386, 523 |
| BssAI | RCCGGY | 2 cut(s) | 1058, 1467 |
| BssECI | CCNNGG | 2 cut(s) | 466, 1384 |
| BssMI | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| BssNAI | GTATAC | 1 cut(s) | 1268 |
| BssNI | GRCGYC | 1 cut(s) | 816 |
| Bst1107I | GTATAC | 1 cut(s) | 1268 |
| Bst4CI | ACNGT | 7 cut(s) | 144, 354, 629, 999, 1030, 1071, 1360 |
| BstACI | GRCGYC | 1 cut(s) | 816 |
| BstAFI | CTTAAG | 1 cut(s) | 428 |
| BstC8I | GCNNGC | 3 cut(s) | 309, 361, 517 |
| BstDEI | CTNAG | 8 cut(s) | 100, 686, 758, 775, 792, 1087, 1203, 1308 |
| BstF5I | GGATG | 2 cut(s) | 995, 1435 |
| BstFNI | CGCG | 1 cut(s) | 515 |
| BstHHI | GCGC | 1 cut(s) | 482 |
| BstKTI | GATC | 8 cut(s) | 349, 409, 564, 685, 757, 872, 1276, 1399 |
| BstMAI | GTCTC | 1 cut(s) | 1172 |
| BstMBI | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 304, 313, 334, 555 |
| BstSCI | CCNGG | 2 cut(s) | 1383, 1461 |
| BstSFI | CTRYAG | 1 cut(s) | 174 |
| BstUI | CGCG | 1 cut(s) | 515 |
| BstX2I | RGATCY | 3 cut(s) | 406, 561, 869 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 530 |
| BstYI | RGATCY | 3 cut(s) | 406, 561, 869 |
| BstZ17I | GTATAC | 1 cut(s) | 1268 |
| Bsu36I | CCTNAGG | 1 cut(s) | 792 |
| BsuRI | GGCC | 1 cut(s) | 444 |
| BtgZI | GCGATG | 1 cut(s) | 315 |
| BtsCI | GGATG | 2 cut(s) | 995, 1435 |
| BtsI | GCAGTG | 1 cut(s) | 876 |
| BtsIMutI | CAGTG | 2 cut(s) | 876, 1026 |
| BtuMI | TCGCGA | 1 cut(s) | 515 |
| BveI | ACCTGC | 1 cut(s) | 181 |
| Cac8I | GCNNGC | 3 cut(s) | 309, 361, 517 |
| CaiI | CAGNNNCTG | 3 cut(s) | 173, 641, 782 |
| CfoI | GCGC | 1 cut(s) | 482 |
| Cfr10I | RCCGGY | 2 cut(s) | 1058, 1467 |
| Cfr13I | GGNCC | 5 cut(s) | 443, 917, 1061, 1211, 1465 |
| CpoI | CGGWCCG | 1 cut(s) | 1465 |
| CseI | GACGC | 1 cut(s) | 508 |
| Csp6I | GTAC | 3 cut(s) | 949, 1000, 1072 |
| CspAI | ACCGGT | 1 cut(s) | 1058 |
| CspI | CGGWCCG | 1 cut(s) | 1465 |
| CviAII | CATG | 3 cut(s) | 207, 234, 1318 |
| CviQI | GTAC | 3 cut(s) | 949, 1000, 1072 |
| DdeI | CTNAG | 8 cut(s) | 100, 686, 758, 775, 792, 1087, 1203, 1308 |
| DpnI | GATC | 8 cut(s) | 348, 408, 563, 684, 756, 871, 1275, 1398 |
| DpnII | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 815 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 815 |
| EciI | GGCGGA | 1 cut(s) | 291 |
| Ecl136II | GAGCTC | 2 cut(s) | 363, 679 |
| Eco24I | GRGCYC | 2 cut(s) | 365, 681 |
| Eco47I | GGWCC | 4 cut(s) | 917, 1061, 1211, 1465 |
| Eco53kI | GAGCTC | 2 cut(s) | 363, 679 |
| Eco81I | CCTNAGG | 1 cut(s) | 792 |
| Eco88I | CYCGRG | 1 cut(s) | 1020 |
| EcoICRI | GAGCTC | 2 cut(s) | 363, 679 |
| EcoO109I | RGGNCCY | 1 cut(s) | 443 |
| EcoT38I | GRGCYC | 2 cut(s) | 365, 681 |
| FaeI | CATG | 3 cut(s) | 210, 237, 1321 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 948, 980 |
| FaqI | GGGAC | 1 cut(s) | 1346 |
| FatI | CATG | 3 cut(s) | 206, 233, 1317 |
| FblI | GTMKAC | 1 cut(s) | 1267 |
| Fnu4HI | GCNGC | 2 cut(s) | 305, 335 |
| FokI | GGATG | 2 cut(s) | 1002, 1422 |
| FriOI | GRGCYC | 2 cut(s) | 365, 681 |
| Fsp4HI | GCNGC | 2 cut(s) | 305, 335 |
| FspBI | CTAG | 2 cut(s) | 410, 720 |
| GlaI | GCGC | 1 cut(s) | 481 |
| GluI | GCNGC | 2 cut(s) | 305, 335 |
| GsaI | CCCAGC | 1 cut(s) | 328 |
| HaeIII | GGCC | 1 cut(s) | 444 |
| HgaI | GACGC | 1 cut(s) | 508 |
| HhaI | GCGC | 1 cut(s) | 482 |
| Hin1I | GRCGYC | 1 cut(s) | 816 |
| Hin1II | CATG | 3 cut(s) | 210, 237, 1321 |
| Hin6I | GCGC | 1 cut(s) | 480 |
| HinP1I | GCGC | 1 cut(s) | 480 |
| HincII | GTYRAC | 1 cut(s) | 984 |
| HindII | GTYRAC | 1 cut(s) | 984 |
| HindIII | AAGCTT | 1 cut(s) | 851 |
| HinfI | GANTC | 3 cut(s) | 471, 1375, 1477 |
| HpaI | GTTAAC | 1 cut(s) | 984 |
| HphI | GGTGA | 4 cut(s) | 138, 144, 595, 883 |
| Hpy166II | GTNNAC | 5 cut(s) | 912, 984, 1268, 1356, 1391 |
| Hpy188I | TCNGA | 6 cut(s) | 470, 849, 1010, 1215, 1300, 1476 |
| Hpy8I | GTNNAC | 5 cut(s) | 912, 984, 1268, 1356, 1391 |
| Hpy99I | CGWCG | 1 cut(s) | 818 |
| HpyAV | CCTTC | 4 cut(s) | 159, 231, 434, 904 |
| HpyCH4III | ACNGT | 7 cut(s) | 144, 354, 629, 999, 1030, 1071, 1360 |
| HpyCH4IV | ACGT | 4 cut(s) | 746, 816, 1176, 1251 |
| HpyCH4V | TGCA | 3 cut(s) | 176, 311, 456 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 304, 313, 334, 555 |
| HpyF3I | CTNAG | 8 cut(s) | 100, 686, 758, 775, 792, 1087, 1203, 1308 |
| HpySE526I | ACGT | 4 cut(s) | 746, 816, 1176, 1251 |
| Hsp92I | GRCGYC | 1 cut(s) | 816 |
| Hsp92II | CATG | 3 cut(s) | 210, 237, 1321 |
| HspAI | GCGC | 1 cut(s) | 480 |
| KspAI | GTTAAC | 1 cut(s) | 984 |
| Kzo9I | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| LweI | GCATC | 2 cut(s) | 511, 980 |
| MaeI | CTAG | 2 cut(s) | 410, 720 |
| MaeII | ACGT | 4 cut(s) | 746, 816, 1176, 1251 |
| MaeIII | GTNAC | 4 cut(s) | 122, 144, 601, 1441 |
| MalI | GATC | 8 cut(s) | 348, 408, 563, 684, 756, 871, 1275, 1398 |
| MboI | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| MboII | GAAGA | 6 cut(s) | 14, 17, 601, 608, 1268, 1306 |
| MflI | RGATCY | 3 cut(s) | 406, 561, 869 |
| MhlI | GDGCHC | 2 cut(s) | 365, 681 |
| MlyI | GAGTC | 1 cut(s) | 465 |
| MmeI | TCCRAC | 1 cut(s) | 648 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1300 |
| MspCI | CTTAAG | 1 cut(s) | 428 |
| MspR9I | CCNGG | 2 cut(s) | 1385, 1463 |
| MvnI | CGCG | 1 cut(s) | 515 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 304, 313, 334, 555 |
| NciI | CCSGG | 2 cut(s) | 1385, 1463 |
| NdeII | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| NlaIII | CATG | 3 cut(s) | 210, 237, 1321 |
| NlaIV | GGNNCC | 5 cut(s) | 159, 445, 871, 918, 1135 |
| NmuCI | GTSAC | 2 cut(s) | 144, 601 |
| NruI | TCGCGA | 1 cut(s) | 515 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 813 |
| PfeI | GAWTC | 2 cut(s) | 1375, 1477 |
| PinAI | ACCGGT | 1 cut(s) | 1058 |
| PkrI | GCNGC | 2 cut(s) | 306, 336 |
| PleI | GAGTC | 1 cut(s) | 465 |
| PpsI | GAGTC | 1 cut(s) | 465 |
| Psp124BI | GAGCTC | 2 cut(s) | 365, 681 |
| Psp1406I | AACGTT | 1 cut(s) | 1176 |
| PspFI | CCCAGC | 1 cut(s) | 324 |
| PspN4I | GGNNCC | 5 cut(s) | 159, 445, 871, 918, 1135 |
| PspPI | GGNCC | 5 cut(s) | 443, 917, 1061, 1211, 1465 |
| PstI | CTGCAG | 1 cut(s) | 178 |
| PstNI | CAGNNNCTG | 3 cut(s) | 173, 641, 782 |
| PsuI | RGATCY | 3 cut(s) | 406, 561, 869 |
| RruI | TCGCGA | 1 cut(s) | 515 |
| RsaI | GTAC | 3 cut(s) | 950, 1001, 1073 |
| RsaNI | GTAC | 3 cut(s) | 949, 1000, 1072 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1300 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1465 |
| RsrII | CGGWCCG | 1 cut(s) | 1465 |
| SacI | GAGCTC | 2 cut(s) | 365, 681 |
| SatI | GCNGC | 2 cut(s) | 305, 335 |
| Sau3AI | GATC | 8 cut(s) | 346, 406, 561, 682, 754, 869, 1273, 1396 |
| Sau96I | GGNCC | 5 cut(s) | 443, 917, 1061, 1211, 1465 |
| SchI | GAGTC | 1 cut(s) | 465 |
| ScrFI | CCNGG | 2 cut(s) | 1385, 1463 |
| SduI | GDGCHC | 2 cut(s) | 365, 681 |
| SfaNI | GCATC | 2 cut(s) | 511, 980 |
| SfcI | CTRYAG | 1 cut(s) | 174 |
| SinI | GGWCC | 4 cut(s) | 917, 1061, 1211, 1465 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1300 |
| SmlI | CTYRAG | 4 cut(s) | 428, 541, 566, 1425 |
| SmoI | CTYRAG | 4 cut(s) | 428, 541, 566, 1425 |
| SpeI | ACTAGT | 1 cut(s) | 719 |
| SsiI | CCGC | 5 cut(s) | 302, 305, 314, 335, 1321 |
| SspMI | CTAG | 2 cut(s) | 410, 720 |
| SstI | GAGCTC | 2 cut(s) | 365, 681 |
| StyD4I | CCNGG | 2 cut(s) | 1383, 1461 |
| TaaI | ACNGT | 7 cut(s) | 144, 354, 629, 999, 1030, 1071, 1360 |
| TaiI | ACGT | 4 cut(s) | 749, 819, 1179, 1254 |
| TaqI | TCGA | 6 cut(s) | 585, 681, 807, 813, 1035, 1187 |
| TauI | GCSGC | 2 cut(s) | 307, 337 |
| TfiI | GAWTC | 2 cut(s) | 1375, 1477 |
| TscAI | CASTG | 2 cut(s) | 883, 1033 |
| TseFI | GTSAC | 2 cut(s) | 144, 601 |
| Tsp45I | GTSAC | 2 cut(s) | 144, 601 |
| TspDTI | ATGAA | 3 cut(s) | 814, 1274, 1306 |
| TspRI | CASTG | 2 cut(s) | 883, 1033 |
| Vha464I | CTTAAG | 1 cut(s) | 428 |
| VpaK11BI | GGWCC | 4 cut(s) | 917, 1061, 1211, 1465 |
| XapI | RAATTY | 1 cut(s) | 665 |
| XmiI | GTMKAC | 1 cut(s) | 1267 |
| XspI | CTAG | 2 cut(s) | 410, 720 |
| ZraI | GACGTC | 1 cut(s) | 817 |