AT2G14110

Acid Phosphatase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
5951823 .. 5953185
1363 bp
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UTR
Exon/CDS
Intron
AT2G14110.2

Sequence Viewer

Length: 573 bp
ATGGCGGAAGAGAAGGTAAAAGATGAAGCTATGCAAATAATGGGAATGTTTCAAATTCTTCCGAGACTTGTCGTCTTTGATCTCGATTATACTCTCTGGCCTTTCTACTGTGAGTGCCGTTCGAAACGAGAAATGCCATCTATGTATCCACAAGCAAAGGGTATATTGAGTGCTTTGAAAGAGAAGGGTATCGAAATGGCTATTGCTTCGAGATCTCCTACTTCAGATATTGCTAACACATTTCTTGATAAATTGAACATTAAGCCCATGTTTGTGGCCAAGGAAATATACTCAAGTTGGAGTCATAAGACGGAACATTTTCAGAAGATACACACAAGAACGGGAGTGCCGTTTACCGCGATGCTCTTCTTCGATGATGAAGACCGAAACATTAAATCAGTTTCGAAAATGGGAGTGACAAGCATCCTTGTTGGTGATGGGGTTACGCTTGGAGCATTTAGACAAGGGCTTACTGAATTTACTCAAAATCATAATAGTATCGAGAAGAATAAACAGGTTTGGCGTGACAAGTATTCTGGAAAGCCTACATCATCGGAGACAGACAAAGATTAA
Functional Annotation

Protein Analysis

190

Amino Acids

21.75

Weight (kDa)

7.74

Isoelectric Point (pI)

54.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acid_PPase PF12689 20 - 135 2.4e-26 Acid Phosphatase
HAD_2 PF13419 42 - 135 1.7e-06 Haloacid dehalogenase-like hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 359
AciI CCGC 2 cut(s) 5, 357
AcoI YGGCCR 1 cut(s) 276
AcsI RAATTY 2 cut(s) 54, 476
AcuI CTGAAG 1 cut(s) 207
AgsI TTSAA 3 cut(s) 53, 178, 256
AhdI GACNNNNNGTC 1 cut(s) 71
AluBI AGCT 1 cut(s) 29
AluI AGCT 1 cut(s) 29
Alw26I GTCTC 2 cut(s) 58, 551
AoxI GGCC 2 cut(s) 98, 276
ApoI RAATTY 2 cut(s) 54, 476
Asp700I GAANNNNTTC 1 cut(s) 318
AsuHPI GGTGA 1 cut(s) 446
AsuII TTCGAA 2 cut(s) 122, 404
BalI TGGCCA 1 cut(s) 278
BbsI GAAGAC 1 cut(s) 387
BccI CCATC 2 cut(s) 145, 431
BceAI ACGGC 2 cut(s) 102, 334
BciVI GTATCC 1 cut(s) 156
BcoDI GTCTC 2 cut(s) 58, 551
BfuI GTATCC 1 cut(s) 156
BglII AGATCT 1 cut(s) 212
BmeRI GACNNNNNGTC 1 cut(s) 71
BmsI GCATC 2 cut(s) 351, 432
BpiI GAAGAC 1 cut(s) 387
Bpu14I TTCGAA 2 cut(s) 122, 404
BpuEI CTTGAG 1 cut(s) 277
BsaJI CCNNGG 1 cut(s) 279
BseDI CCNNGG 1 cut(s) 279
BseGI GGATG 1 cut(s) 423
Bsh1236I CGCG 1 cut(s) 359
BshFI GGCC 2 cut(s) 100, 278
BsmAI GTCTC 2 cut(s) 58, 551
BsnI GGCC 2 cut(s) 100, 278
Bsp119I TTCGAA 2 cut(s) 122, 404
Bsp143I GATC 2 cut(s) 79, 212
BspACI CCGC 2 cut(s) 5, 357
BspANI GGCC 2 cut(s) 100, 278
BspFNI CGCG 1 cut(s) 359
BspQI GCTCTTC 1 cut(s) 371
BspT104I TTCGAA 2 cut(s) 122, 404
BssECI CCNNGG 1 cut(s) 279
BssMI GATC 2 cut(s) 79, 212
BssT1I CCWWGG 1 cut(s) 279
Bst4CI ACNGT 1 cut(s) 110
Bst6I CTCTTC 2 cut(s) 3, 371
BstBI TTCGAA 2 cut(s) 122, 404
BstF5I GGATG 1 cut(s) 423
BstFNI CGCG 1 cut(s) 359
BstKTI GATC 2 cut(s) 82, 215
BstMAI GTCTC 2 cut(s) 58, 551
BstMBI GATC 2 cut(s) 79, 212
BstUI CGCG 1 cut(s) 359
BstV2I GAAGAC 1 cut(s) 387
BstX2I RGATCY 1 cut(s) 212
BstXI CCANNNNNNTGG 1 cut(s) 274
BstYI RGATCY 1 cut(s) 212
BsuI GTATCC 1 cut(s) 156
BsuRI GGCC 2 cut(s) 100, 278
BtgZI GCGATG 1 cut(s) 374
BtsCI GGATG 1 cut(s) 423
CviAII CATG 1 cut(s) 268
CviJI RGCY 7 cut(s) 29, 100, 200, 265, 278, 469, 544
CviKI_1 RGCY 7 cut(s) 29, 100, 200, 265, 278, 469, 544
DpnI GATC 2 cut(s) 81, 214
DpnII GATC 2 cut(s) 79, 212
DriI GACNNNNNGTC 1 cut(s) 71
EaeI YGGCCR 1 cut(s) 276
Eam1104I CTCTTC 2 cut(s) 3, 371
Eam1105I GACNNNNNGTC 1 cut(s) 71
EarI CTCTTC 2 cut(s) 3, 371
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 279
Eco57I CTGAAG 1 cut(s) 207
EcoT14I CCWWGG 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 1 cut(s) 271
FaiI YATR 8 cut(s) 32, 90, 143, 164, 269, 289, 306, 492
FatI CATG 1 cut(s) 267
FokI GGATG 1 cut(s) 410
HaeIII GGCC 2 cut(s) 100, 278
Hin1II CATG 1 cut(s) 271
HinfI GANTC 1 cut(s) 301
HphI GGTGA 1 cut(s) 446
Hpy166II GTNNAC 1 cut(s) 354
Hpy188I TCNGA 4 cut(s) 63, 226, 324, 556
Hpy188III TCNNGA 5 cut(s) 83, 210, 245, 502, 537
Hpy8I GTNNAC 1 cut(s) 354
HpyAV CCTTC 2 cut(s) 7, 178
HpyCH4III ACNGT 1 cut(s) 110
HpyCH4V TGCA 1 cut(s) 34
Hsp92II CATG 1 cut(s) 271
Kzo9I GATC 2 cut(s) 79, 212
LguI GCTCTTC 1 cut(s) 371
LmnI GCTCC 1 cut(s) 452
LpnPI CCDG 3 cut(s) 82, 500, 522
LweI GCATC 2 cut(s) 351, 432
MaeIII GTNAC 3 cut(s) 415, 442, 524
MalI GATC 2 cut(s) 81, 214
MboI GATC 2 cut(s) 79, 212
MboII GAAGA 7 cut(s) 20, 50, 337, 358, 361, 392, 517
MflI RGATCY 1 cut(s) 212
MlsI TGGCCA 1 cut(s) 278
MluCI AATT 3 cut(s) 54, 251, 476
MluNI TGGCCA 1 cut(s) 278
MlyI GAGTC 1 cut(s) 310
MmeI TCCRAC 1 cut(s) 278
Mox20I TGGCCA 1 cut(s) 278
MroXI GAANNNNTTC 1 cut(s) 318
MscI TGGCCA 1 cut(s) 278
MseI TTAA 3 cut(s) 261, 393, 571
MslI CAYNNNNRTG 1 cut(s) 272
Msp20I TGGCCA 1 cut(s) 278
MvnI CGCG 1 cut(s) 359
NdeII GATC 2 cut(s) 79, 212
NlaIII CATG 1 cut(s) 271
NmuCI GTSAC 2 cut(s) 415, 524
NspV TTCGAA 2 cut(s) 122, 404
PciSI GCTCTTC 1 cut(s) 371
PcsI WCGNNNNNNNCGW 1 cut(s) 347
PdmI GAANNNNTTC 1 cut(s) 318
PleI GAGTC 1 cut(s) 309
PpsI GAGTC 1 cut(s) 309
PsuI RGATCY 1 cut(s) 212
RseI CAYNNNNRTG 1 cut(s) 272
SapI GCTCTTC 1 cut(s) 371
SaqAI TTAA 3 cut(s) 261, 393, 571
Sau3AI GATC 2 cut(s) 79, 212
SchI GAGTC 1 cut(s) 310
SetI ASST 3 cut(s) 18, 31, 519
SfaNI GCATC 2 cut(s) 351, 432
SfuI TTCGAA 2 cut(s) 122, 404
SmiMI CAYNNNNRTG 1 cut(s) 272
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
Sse9I AATT 3 cut(s) 54, 251, 476
SsiI CCGC 2 cut(s) 5, 357
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 1 cut(s) 110
TaqI TCGA 7 cut(s) 84, 122, 192, 209, 372, 404, 501
TaqII GACCGA 1 cut(s) 399
TasI AATT 3 cut(s) 54, 251, 476
Tru1I TTAA 3 cut(s) 261, 393, 571
Tru9I TTAA 3 cut(s) 261, 393, 571
TseFI GTSAC 2 cut(s) 415, 524
Tsp45I GTSAC 2 cut(s) 415, 524
TspDTI ATGAA 2 cut(s) 39, 393
TspGWI ACGGA 1 cut(s) 326
XapI RAATTY 2 cut(s) 54, 476
XmnI GAANNNNTTC 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.