Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0004104

Physical Location & Seq

Genomic Coordinates Forward (+)

20944715 .. 20946187

Gene Structure 1473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G201600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 516 bp

ATGGGAGACGACGAGAAAGTGAAGAACGAGGCTCTCCAGATAATCGGGCAACACCAGAACTTGCCCACTCTTGTCGTCTTCGATCTCGATTACACTCTATGGCCCTTCTATTGCGAATGCTGCGATGAGGATGAAATGCCATATCTCTATCCACAGGCCTCAGCCATATTATATGCTCTCAAAGACAAGGCCATTTCCATGGCTGTTGCTTCAAGGTCTCCAACTCCTGATATAGCCAAATCATTCCTTCAAACATTGGGCATCCACTCCTTGTTTGTGACCCAGGAGATTTTCTCCAGTTGGACTCACAAAACAGAGCATATTCAAAGAATTCATGCAACCACTGGGGTGCCATTTAGCTCAATGCTTTTCTTTGATGATGAGGATAGGAATATTCAAACGGTATCCAAAATGGGTGTGACAAGCATTTTAGTTGGTAATGGGGTGAACCTTGGAGCTTTGAGGCAGGGATTGTTGGAATTCTCTCGAAAGTCAGCTTCATCTAGCCGGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acid_PPase

Protein Analysis

172

Amino Acids

19.18

Weight (kDa)

5.47

Isoelectric Point (pI)

61.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14110 AT2G14110
fragaria_vesca	FvH4_1g19640 FvH4_2g11710
malus_domestica	MD01G1039300.v1.1 MD05G1047400.v1.1
prunus_persica	Prupe.6G201600_v2.0.a1 Prupe.8G069800_v2.0.a1
pyrus_communis	pycom01g06700 pycom05g03940
rosa_chinensis	RchiOBHm_Chr2g0111211 RchiOBHm_Chr6g0271011
rosa_laevigata	RLG00000002077 RLG00000013753 RLG00000017874
rosa_multiflora	Rmu_sc0003055.1_g000002 Rmu_sc0010074.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132620 Rroxscaffold_7G00197430
rosa_rugosa	Rorug02G0171600 Rorug07G0206900 Rorug07G0207000
rosa_samantha	Rh2AG224700 Rh2BG236500 Rh2CG227700 Rh2DG232300 Rh6AG177400 Rh6AG177500 Rh6CG176800 Rh6DG169000 Rh7BG339100
rosa_wichuraiana	Rw2G017350 Rw6G015130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	349
AcsI	RAATTY	2 cut(s)	330, 479
AgsI	TTSAA	4 cut(s)	213, 251, 326, 398
AjnI	CCWGG	1 cut(s)	282
AleI	CACNNNNGTG	1 cut(s)	347
AluBI	AGCT	3 cut(s)	360, 458, 497
AluI	AGCT	3 cut(s)	360, 458, 497
Alw26I	GTCTC	1 cut(s)	222
AoxI	GGCC	3 cut(s)	101, 156, 189
ApeKI	GCWGC	1 cut(s)	120
ApoI	RAATTY	2 cut(s)	330, 479
AspS9I	GGNCC	1 cut(s)	102
AsuHPI	GGTGA	1 cut(s)	457
BanI	GGYRCC	1 cut(s)	349
BbsI	GAAGAC	1 cut(s)	70
BbvCI	CCTCAGC	1 cut(s)	160
BbvI	GCAGC	1 cut(s)	107
BciT130I	CCWGG	1 cut(s)	284
BciVI	GTATCC	1 cut(s)	415
BcoDI	GTCTC	1 cut(s)	222
BfaI	CTAG	1 cut(s)	504
BfuI	GTATCC	1 cut(s)	415
BisI	GCNGC	1 cut(s)	121
BlsI	GCNGC	1 cut(s)	122
Bme1390I	CCNGG	1 cut(s)	284
BmgT120I	GGNCC	1 cut(s)	102
BmiI	GGNNCC	1 cut(s)	351
BmrFI	CCNGG	1 cut(s)	284
BmrI	ACTGGG	1 cut(s)	354
BmsI	GCATC	1 cut(s)	270
BmuI	ACTGGG	1 cut(s)	354
BpiI	GAAGAC	1 cut(s)	70
BplI	GAGNNNNNCTC	2 cut(s)	278, 310
BpmI	CTGGAG	2 cut(s)	20, 280
Bpu10I	CCTNAGC	1 cut(s)	160
BsaI	GGTCTC	1 cut(s)	222
BsaJI	CCNNGG	3 cut(s)	198, 282, 451
Bse1I	ACTGG	2 cut(s)	297, 349
BseBI	CCWGG	1 cut(s)	284
BseDI	CCNNGG	3 cut(s)	198, 282, 451
BseGI	GGATG	2 cut(s)	136, 261
BseMII	CTCAG	1 cut(s)	174
BseNI	ACTGG	2 cut(s)	297, 349
BseXI	GCAGC	1 cut(s)	107
BshFI	GGCC	3 cut(s)	103, 158, 191
BshNI	GGYRCC	1 cut(s)	349
BsiSI	CCGG	1 cut(s)	508
BsmAI	GTCTC	1 cut(s)	222
BsmI	GAATGC	1 cut(s)	122
BsnI	GGCC	3 cut(s)	103, 158, 191
Bso31I	GGTCTC	1 cut(s)	222
Bsp143I	GATC	1 cut(s)	82
Bsp19I	CCATGG	1 cut(s)	198
BspANI	GGCC	3 cut(s)	103, 158, 191
BspCNI	CTCAG	1 cut(s)	173
BspLI	GGNNCC	1 cut(s)	351
BspT107I	GGYRCC	1 cut(s)	349
BspTNI	GGTCTC	1 cut(s)	222
BsrI	ACTGG	2 cut(s)	297, 349
BssECI	CCNNGG	3 cut(s)	198, 282, 451
BssMI	GATC	1 cut(s)	82
BssT1I	CCWWGG	2 cut(s)	198, 451
Bst2UI	CCWGG	1 cut(s)	284
Bst4CI	ACNGT	1 cut(s)	403
BstDEI	CTNAG	1 cut(s)	160
BstDSI	CCRYGG	1 cut(s)	198
BstF5I	GGATG	2 cut(s)	136, 261
BstKTI	GATC	1 cut(s)	85
BstMAI	GTCTC	1 cut(s)	222
BstMBI	GATC	1 cut(s)	82
BstMWI	GCNNNNNNNGC	1 cut(s)	120
BstNI	CCWGG	1 cut(s)	284
BstSCI	CCNGG	1 cut(s)	282
BstV1I	GCAGC	1 cut(s)	107
BstV2I	GAAGAC	1 cut(s)	70
BstXI	CCANNNNNNTGG	1 cut(s)	199
BsuI	GTATCC	1 cut(s)	415
BsuRI	GGCC	3 cut(s)	103, 158, 191
BtgI	CCRYGG	1 cut(s)	198
BtgZI	GCGATG	1 cut(s)	138
BtsCI	GGATG	2 cut(s)	136, 261
BtsIMutI	CAGTG	1 cut(s)	342
Cfr13I	GGNCC	1 cut(s)	102
CviAII	CATG	2 cut(s)	199, 335
DdeI	CTNAG	1 cut(s)	160
DpnI	GATC	1 cut(s)	84
DpnII	GATC	1 cut(s)	82
Eco130I	CCWWGG	2 cut(s)	198, 451
Eco147I	AGGCCT	1 cut(s)	158
Eco31I	GGTCTC	1 cut(s)	222
EcoRI	GAATTC	2 cut(s)	330, 479
EcoRII	CCWGG	1 cut(s)	282
EcoT14I	CCWWGG	2 cut(s)	198, 451
ErhI	CCWWGG	2 cut(s)	198, 451
FaeI	CATG	2 cut(s)	202, 338
FaiI	YATR	9 cut(s)	100, 142, 167, 172, 174, 200, 233, 321, 336
FatI	CATG	2 cut(s)	198, 334
Fnu4HI	GCNGC	1 cut(s)	121
FokI	GGATG	2 cut(s)	143, 248
Fsp4HI	GCNGC	1 cut(s)	121
FspBI	CTAG	1 cut(s)	504
GluI	GCNGC	1 cut(s)	121
GsuI	CTGGAG	2 cut(s)	20, 280
HaeIII	GGCC	3 cut(s)	103, 158, 191
HapII	CCGG	1 cut(s)	508
Hin1II	CATG	2 cut(s)	202, 338
HinfI	GANTC	1 cut(s)	304
HpaII	CCGG	1 cut(s)	508
HphI	GGTGA	1 cut(s)	457
Hpy166II	GTNNAC	1 cut(s)	448
Hpy188III	TCNNGA	4 cut(s)	37, 86, 227, 486
Hpy8I	GTNNAC	1 cut(s)	448
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	2 cut(s)	115, 257
HpyCH4III	ACNGT	1 cut(s)	403
HpyCH4V	TGCA	1 cut(s)	338
HpyF10VI	GCNNNNNNNGC	1 cut(s)	120
HpyF3I	CTNAG	1 cut(s)	160
Hsp92II	CATG	2 cut(s)	202, 338
Kzo9I	GATC	1 cut(s)	82
LmnI	GCTCC	1 cut(s)	455
LpnPI	CCDG	9 cut(s)	50, 68, 140, 240, 269, 296, 310, 330, 452
Lsp1109I	GCAGC	1 cut(s)	107
LweI	GCATC	1 cut(s)	270
MaeI	CTAG	1 cut(s)	504
MaeIII	GTNAC	2 cut(s)	277, 418
MalI	GATC	1 cut(s)	84
MboI	GATC	1 cut(s)	82
MboII	GAAGA	2 cut(s)	34, 70
MluCI	AATT	2 cut(s)	330, 479
MlyI	GAGTC	1 cut(s)	298
MmeI	TCCRAC	3 cut(s)	245, 281, 456
MnlI	CCTC	6 cut(s)	22, 121, 169, 376, 456, 504
MslI	CAYNNNNRTG	2 cut(s)	197, 347
MspI	CCGG	1 cut(s)	508
MspR9I	CCNGG	1 cut(s)	284
Mva1269I	GAATGC	1 cut(s)	122
MvaI	CCWGG	1 cut(s)	284
MwoI	GCNNNNNNNGC	1 cut(s)	120
NcoI	CCATGG	1 cut(s)	198
NdeII	GATC	1 cut(s)	82
NlaIII	CATG	2 cut(s)	202, 338
NlaIV	GGNNCC	1 cut(s)	351
NmuCI	GTSAC	2 cut(s)	277, 418
OliI	CACNNNNGTG	1 cut(s)	347
PceI	AGGCCT	1 cut(s)	158
PctI	GAATGC	1 cut(s)	122
PkrI	GCNGC	1 cut(s)	122
PleI	GAGTC	1 cut(s)	298
PpsI	GAGTC	1 cut(s)	298
Psp6I	CCWGG	1 cut(s)	282
PspGI	CCWGG	1 cut(s)	282
PspN4I	GGNNCC	1 cut(s)	351
PspPI	GGNCC	1 cut(s)	102
RseI	CAYNNNNRTG	2 cut(s)	197, 347
SatI	GCNGC	1 cut(s)	121
Sau3AI	GATC	1 cut(s)	82
Sau96I	GGNCC	1 cut(s)	102
SchI	GAGTC	1 cut(s)	298
ScrFI	CCNGG	1 cut(s)	284
SetI	ASST	6 cut(s)	218, 362, 453, 460, 499, 515
SfaNI	GCATC	1 cut(s)	270
SmiMI	CAYNNNNRTG	2 cut(s)	197, 347
Sse9I	AATT	2 cut(s)	330, 479
SseBI	AGGCCT	1 cut(s)	158
SspI	AATATT	1 cut(s)	394
SspMI	CTAG	1 cut(s)	504
StuI	AGGCCT	1 cut(s)	158
StyD4I	CCNGG	1 cut(s)	282
StyI	CCWWGG	2 cut(s)	198, 451
TaaI	ACNGT	1 cut(s)	403
TaqI	TCGA	3 cut(s)	81, 87, 487
TasI	AATT	2 cut(s)	330, 479
TscAI	CASTG	1 cut(s)	349
TseFI	GTSAC	2 cut(s)	277, 418
TseI	GCWGC	1 cut(s)	120
Tsp45I	GTSAC	2 cut(s)	277, 418
TspDTI	ATGAA	3 cut(s)	147, 323, 489
TspRI	CASTG	1 cut(s)	349
XapI	RAATTY	2 cut(s)	330, 479
XspI	CTAG	1 cut(s)	504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.