AT2G14530

GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
6187371 .. 6190380
3010 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G14530.1

Sequence Viewer

Length: 1239 bp
ATGGCTACAACTTCACACAACAAACCCTCACTCTTCCCTCTACTCTCCCTTCTCTGTTTCATCTCCATTTTCCTCCTCCTCTCTCTATCCAAACGCGCTTCCCTCTCCTCTCCCAAAACTCACCGCTCCGCCACCGTCTTCCCTCCAAAACCCGACGGTTCCCTCTCACCTCTCTCCGCCACTTGCGACTTCTCCGAAGGCTCCTGGATCTACGACCCCAACCCCAGATCCACCAGGTACACCAGTAGTTGTAAAGAAATCTTCAAAGGATGGAATTGTATTCGTAACAACAAAACCAATGGTTTCGAGATATCTAATTGGCGATGGAAACCTAAACACTGTGATCTTCCTTCGTTTGATCCACTCAAATTTCTTCAGTCTCATCGCAATACCAACATCGGATTTGTGGGTGATTCATTGAATAGGAACATGTTTGTATCTTTATTCTGTATGTTAAAGAGTGTGACGGGTGAATTGAAGAAGTGGCGACCTGCCGGTGCAGATCGCGGATTCACGTTTTCGCAGTATAATTTGACTATCGCGTATCATCGAACAAATCTATTGGCTCGTTATGGTAGATGGTCAGCCAATGCTAAGGGTGGTGAGTTAGAATCTCTTGGATTTAAAGAGGGCTATAGAGTTGATGTTGATATTCCAGACAGCTCGTGGGCGAAGGCTTCGAGTTTCCATGACATTCTCATTTTGAACACTGGGCATTGGTGGTGGGCGCCATCAAAATTTGACCCTGTAAAATCTCCTATGCTTTTCTTTGAAGGCGGTCGGCCAATACTTCCACCTATACCTCCTGCTACTGGCCTAGACCGGGTTCTAAACAATATGGTAAATTTTGTGGAGAAAACAAAGCGACCTGGAGGGATCATATTCTTCCGGACACAATCACCTAGGCACTTTGAAGGAGGTGACTGGGACCAAGGTGGTACTTGTCAACGACTGCAACCTTTGTTACCTGGAAAAGTTGAGGAATTTTTCTCAGTGGGGAACAACGGAACAAATGTAGAGGTTCGTCTCGTGAATCAACACCTCTATAACTCCCTCAAGAGTAGAAGCGCCTTCCACGTTTTGGACATAACTCGAATGAGCGAGTACAGAGCCGACGCTCATCCGGCAGCAGCTGGTGGAAAGAATCACGATGACTGCATGCATTGGTGCCTCCCGGGCCTTACCGACACTTGGAATGATTTATTCGTTGCAACTCTTCATACGATCAAAGCTTTGTAA

Protein Analysis

412

Amino Acids

46.46

Weight (kDa)

9.34

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMR5N PF14416 61 - 115 1.2e-13 PMR5 N terminal Domain
PC-Esterase PF13839 116 - 404 1.5e-70 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 499
AccB1I GGYRCC 2 cut(s) 727, 1167
AccB7I CCANNNNNTGG 1 cut(s) 1081
AccBSI CCGCTC 1 cut(s) 126
AccII CGCG 3 cut(s) 96, 507, 542
AccIII TCCGGA 1 cut(s) 888
AciI CCGC 5 cut(s) 124, 129, 177, 507, 777
AclWI GGATC 4 cut(s) 215, 222, 353, 884
AcoI YGGCCR 1 cut(s) 782
AcsI RAATTY 4 cut(s) 368, 737, 844, 983
AcuI CTGAAG 1 cut(s) 359
AcyI GRCGYC 1 cut(s) 728
AfaI GTAC 3 cut(s) 239, 940, 1106
AfiI CCNNNNNNNGG 4 cut(s) 812, 823, 1081, 1191
AflIII ACRYGT 1 cut(s) 429
AgsI TTSAA 6 cut(s) 265, 421, 478, 706, 773, 914
AjnI CCWGG 4 cut(s) 203, 233, 868, 967
AluBI AGCT 3 cut(s) 663, 1133, 1232
AluI AGCT 3 cut(s) 663, 1133, 1232
Alw26I GTCTC 2 cut(s) 384, 1031
AlwI GGATC 4 cut(s) 215, 222, 353, 884
AlwNI CAGNNNCTG 1 cut(s) 1133
Ama87I CYCGRG 1 cut(s) 1174
Aor13HI TCCGGA 1 cut(s) 888
AoxI GGCC 3 cut(s) 782, 814, 1177
ApeKI GCWGC 2 cut(s) 1127, 1130
ApoI RAATTY 4 cut(s) 368, 737, 844, 983
AspA2I CCTAGG 1 cut(s) 902
AspLEI GCGC 3 cut(s) 98, 730, 1070
AspS9I GGNCC 2 cut(s) 928, 1177
AsuC2I CCSGG 3 cut(s) 824, 1175, 1176
AsuHPI GGTGA 7 cut(s) 113, 159, 422, 482, 614, 891, 932
AvaI CYCGRG 1 cut(s) 1174
AvaII GGWCC 1 cut(s) 928
AvrII CCTAGG 1 cut(s) 902
BaeI ACNNNNGTAYC 2 cut(s) 229, 262
BanI GGYRCC 2 cut(s) 727, 1167
BauI CACGAG 2 cut(s) 664, 1028
BbsI GAAGAC 1 cut(s) 130
BbvI GCAGC 2 cut(s) 1139, 1142
BccI CCATC 4 cut(s) 264, 318, 573, 739
BciT130I CCWGG 4 cut(s) 205, 235, 870, 969
BcnI CCSGG 3 cut(s) 824, 1175, 1176
BcoDI GTCTC 2 cut(s) 384, 1031
BfaI CTAG 2 cut(s) 818, 903
BfmI CTRYAG 1 cut(s) 634
BfoI RGCGCY 2 cut(s) 731, 1071
BfuAI ACCTGC 1 cut(s) 499
BglI GCCNNNNNGGC 1 cut(s) 1176
BisI GCNGC 2 cut(s) 1128, 1131
BlnI CCTAGG 1 cut(s) 902
BlsI GCNGC 2 cut(s) 1129, 1132
Bme1390I CCNGG 7 cut(s) 205, 235, 824, 870, 969, 1175, 1176
Bme18I GGWCC 1 cut(s) 928
BmeT110I CYCGRG 1 cut(s) 1174
BmgT120I GGNCC 2 cut(s) 928, 1177
BmiI GGNNCC 5 cut(s) 160, 202, 729, 929, 1169
BmrFI CCNGG 7 cut(s) 205, 235, 824, 870, 969, 1175, 1176
BmrI ACTGGG 2 cut(s) 720, 934
BmuI ACTGGG 2 cut(s) 720, 934
BpiI GAAGAC 1 cut(s) 130
BpmI CTGGAG 1 cut(s) 891
Bpu10I CCTNAGC 1 cut(s) 594
BpuEI CTTGAG 1 cut(s) 1040
BpuMI CCSGG 3 cut(s) 824, 1175, 1176
BsaHI GRCGYC 1 cut(s) 728
BsaJI CCNNGG 3 cut(s) 902, 931, 1174
BsaWI WCCGGW 1 cut(s) 888
Bsc4I CCNNNNNNNGG 4 cut(s) 812, 823, 1081, 1191
Bse118I RCCGGY 1 cut(s) 494
Bse1I ACTGG 4 cut(s) 243, 715, 817, 929
BseAI TCCGGA 1 cut(s) 888
BseBI CCWGG 4 cut(s) 205, 235, 870, 969
BseDI CCNNGG 3 cut(s) 902, 931, 1174
BseGI GGATG 2 cut(s) 275, 1120
BseLI CCNNNNNNNGG 4 cut(s) 812, 823, 1081, 1191
BseMII CTCAG 1 cut(s) 1005
BseNI ACTGG 4 cut(s) 243, 715, 817, 929
BseRI GAGGAG 3 cut(s) 65, 68, 97
BseXI GCAGC 2 cut(s) 1139, 1142
BsgI GTGCAG 1 cut(s) 519
Bsh1236I CGCG 3 cut(s) 96, 507, 542
Bsh1285I CGRYCG 1 cut(s) 781
BshFI GGCC 3 cut(s) 784, 816, 1179
BshNI GGYRCC 2 cut(s) 727, 1167
BsiEI CGRYCG 1 cut(s) 781
BsiHKCI CYCGRG 1 cut(s) 1174
BsiSI CCGG 5 cut(s) 495, 823, 889, 1124, 1175
BslFI GGGAC 1 cut(s) 941
BslI CCNNNNNNNGG 4 cut(s) 812, 823, 1081, 1191
BsmAI GTCTC 2 cut(s) 384, 1031
BsmBI CGTCTC 1 cut(s) 1031
BsmFI GGGAC 1 cut(s) 941
BsnI GGCC 3 cut(s) 784, 816, 1179
BsoBI CYCGRG 1 cut(s) 1174
Bsp13I TCCGGA 1 cut(s) 888
Bsp143I GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
BspACI CCGC 5 cut(s) 124, 129, 177, 507, 777
BspANI GGCC 3 cut(s) 784, 816, 1179
BspCNI CTCAG 1 cut(s) 1004
BspEI TCCGGA 1 cut(s) 888
BspFNI CGCG 3 cut(s) 96, 507, 542
BspLI GGNNCC 5 cut(s) 160, 202, 729, 929, 1169
BspMI ACCTGC 1 cut(s) 499
BspPI GGATC 4 cut(s) 215, 222, 353, 884
BspT107I GGYRCC 2 cut(s) 727, 1167
BsrBI CCGCTC 1 cut(s) 126
BsrFI RCCGGY 1 cut(s) 494
BsrI ACTGG 4 cut(s) 243, 715, 817, 929
BssAI RCCGGY 1 cut(s) 494
BssECI CCNNGG 3 cut(s) 902, 931, 1174
BssMI GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
BssNI GRCGYC 1 cut(s) 728
BssSI CACGAG 2 cut(s) 664, 1028
BssT1I CCWWGG 2 cut(s) 902, 931
Bst2BI CACGAG 2 cut(s) 664, 1028
Bst2UI CCWGG 4 cut(s) 205, 235, 870, 969
Bst4CI ACNGT 3 cut(s) 136, 158, 341
Bst6I CTCTTC 2 cut(s) 38, 1221
BstACI GRCGYC 1 cut(s) 728
BstC8I GCNNGC 1 cut(s) 1160
BstDEI CTNAG 2 cut(s) 594, 991
BstF5I GGATG 2 cut(s) 275, 1120
BstFNI CGCG 3 cut(s) 96, 507, 542
BstH2I RGCGCY 2 cut(s) 731, 1071
BstHHI GCGC 3 cut(s) 98, 730, 1070
BstKTI GATC 7 cut(s) 210, 230, 346, 361, 505, 879, 1227
BstMAI GTCTC 2 cut(s) 384, 1031
BstMBI GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
BstMCI CGRYCG 1 cut(s) 781
BstMWI GCNNNNNNNGC 2 cut(s) 1124, 1176
BstNI CCWGG 4 cut(s) 205, 235, 870, 969
BstNSI RCATGY 2 cut(s) 433, 1162
BstSCI CCNGG 7 cut(s) 203, 233, 822, 868, 967, 1173, 1174
BstSFI CTRYAG 1 cut(s) 634
BstUI CGCG 3 cut(s) 96, 507, 542
BstV1I GCAGC 2 cut(s) 1139, 1142
BstV2I GAAGAC 1 cut(s) 130
BstX2I RGATCY 2 cut(s) 207, 227
BstYI RGATCY 2 cut(s) 207, 227
BsuRI GGCC 3 cut(s) 784, 816, 1179
BtgZI GCGATG 2 cut(s) 337, 368
BtsCI GGATG 2 cut(s) 275, 1120
BtsIMutI CAGTG 3 cut(s) 337, 708, 999
BveI ACCTGC 1 cut(s) 499
Cac8I GCNNGC 1 cut(s) 1160
CaiI CAGNNNCTG 1 cut(s) 1133
CfoI GCGC 3 cut(s) 98, 730, 1070
Cfr10I RCCGGY 1 cut(s) 494
Cfr13I GGNCC 2 cut(s) 928, 1177
Cfr9I CCCGGG 1 cut(s) 1174
CseI GACGC 1 cut(s) 1124
CsiI ACCWGGT 1 cut(s) 233
Csp6I GTAC 3 cut(s) 238, 939, 1105
CviAII CATG 3 cut(s) 430, 689, 1159
CviQI GTAC 3 cut(s) 238, 939, 1105
DdeI CTNAG 2 cut(s) 594, 991
DinI GGCGCC 1 cut(s) 729
DpnI GATC 7 cut(s) 209, 229, 345, 360, 504, 878, 1226
DpnII GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
DraI TTTAAA 1 cut(s) 625
EaeI YGGCCR 1 cut(s) 782
Eam1104I CTCTTC 2 cut(s) 38, 1221
EarI CTCTTC 2 cut(s) 38, 1221
EciI GGCGGA 2 cut(s) 118, 166
Eco130I CCWWGG 2 cut(s) 902, 931
Eco32I GATATC 1 cut(s) 312
Eco47I GGWCC 1 cut(s) 928
Eco57I CTGAAG 1 cut(s) 359
Eco88I CYCGRG 1 cut(s) 1174
EcoRII CCWGG 4 cut(s) 203, 233, 868, 967
EcoRV GATATC 1 cut(s) 312
EcoT14I CCWWGG 2 cut(s) 902, 931
EcoT22I ATGCAT 1 cut(s) 1164
EgeI GGCGCC 1 cut(s) 729
EheI GGCGCC 1 cut(s) 729
ErhI CCWWGG 2 cut(s) 902, 931
Esp3I CGTCTC 1 cut(s) 1031
FaeI CATG 3 cut(s) 433, 692, 1162
FaqI GGGAC 1 cut(s) 941
FatI CATG 3 cut(s) 429, 688, 1158
Fnu4HI GCNGC 2 cut(s) 1128, 1131
FokI GGATG 2 cut(s) 282, 1107
Fsp4HI GCNGC 2 cut(s) 1128, 1131
FspBI CTAG 2 cut(s) 818, 903
GlaI GCGC 3 cut(s) 97, 729, 1069
GluI GCNGC 2 cut(s) 1128, 1131
GsuI CTGGAG 1 cut(s) 891
HaeII RGCGCY 2 cut(s) 731, 1071
HaeIII GGCC 3 cut(s) 784, 816, 1179
HapII CCGG 5 cut(s) 495, 823, 889, 1124, 1175
HgaI GACGC 1 cut(s) 1124
HhaI GCGC 3 cut(s) 98, 730, 1070
Hin1I GRCGYC 1 cut(s) 728
Hin1II CATG 3 cut(s) 433, 692, 1162
Hin6I GCGC 3 cut(s) 96, 728, 1068
HinP1I GCGC 3 cut(s) 96, 728, 1068
HincII GTYRAC 1 cut(s) 947
HindII GTYRAC 1 cut(s) 947
HindIII AAGCTT 1 cut(s) 1230
HinfI GANTC 5 cut(s) 413, 510, 611, 1033, 1144
HpaII CCGG 5 cut(s) 495, 823, 889, 1124, 1175
HphI GGTGA 7 cut(s) 113, 159, 422, 482, 614, 891, 932
Hpy166II GTNNAC 2 cut(s) 240, 947
Hpy188I TCNGA 2 cut(s) 196, 401
Hpy188III TCNNGA 6 cut(s) 307, 656, 889, 1030, 1057, 1148
Hpy8I GTNNAC 2 cut(s) 240, 947
Hpy99I CGWCG 2 cut(s) 158, 1118
HpyAV CCTTC 7 cut(s) 59, 191, 360, 667, 767, 908, 1081
HpyCH4III ACNGT 3 cut(s) 136, 158, 341
HpyCH4IV ACGT 2 cut(s) 515, 1077
HpyCH4V TGCA 5 cut(s) 500, 955, 1158, 1162, 1211
HpyF10VI GCNNNNNNNGC 2 cut(s) 1124, 1176
HpyF3I CTNAG 2 cut(s) 594, 991
HpySE526I ACGT 2 cut(s) 515, 1077
Hsp92I GRCGYC 1 cut(s) 728
Hsp92II CATG 3 cut(s) 433, 692, 1162
HspAI GCGC 3 cut(s) 96, 728, 1068
KasI GGCGCC 1 cut(s) 727
Kpn2I TCCGGA 1 cut(s) 888
Kzo9I GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
LmnI GCTCC 2 cut(s) 131, 206
Lsp1109I GCAGC 2 cut(s) 1139, 1142
MabI ACCWGGT 1 cut(s) 233
MaeI CTAG 2 cut(s) 818, 903
MaeII ACGT 2 cut(s) 515, 1077
MaeIII GTNAC 4 cut(s) 284, 463, 920, 963
MalI GATC 7 cut(s) 209, 229, 345, 360, 504, 878, 1226
MbiI CCGCTC 1 cut(s) 126
MboI GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
MboII GAAGA 8 cut(s) 25, 130, 253, 338, 365, 490, 877, 1208
MflI RGATCY 2 cut(s) 207, 227
MluCI AATT 8 cut(s) 274, 316, 368, 473, 529, 737, 844, 983
Mly113I GGCGCC 1 cut(s) 728
Mph1103I ATGCAT 1 cut(s) 1164
MroI TCCGGA 1 cut(s) 888
MseI TTAA 2 cut(s) 455, 624
MspA1I CMGCKG 1 cut(s) 1133
MspI CCGG 5 cut(s) 495, 823, 889, 1124, 1175
MspR9I CCNGG 7 cut(s) 205, 235, 824, 870, 969, 1175, 1176
MvaI CCWGG 4 cut(s) 205, 235, 870, 969
MvnI CGCG 3 cut(s) 96, 507, 542
MwoI GCNNNNNNNGC 2 cut(s) 1124, 1176
NarI GGCGCC 1 cut(s) 728
NciI CCSGG 3 cut(s) 824, 1175, 1176
NdeII GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
NlaIII CATG 3 cut(s) 433, 692, 1162
NlaIV GGNNCC 5 cut(s) 160, 202, 729, 929, 1169
NmuCI GTSAC 2 cut(s) 463, 920
NsiI ATGCAT 1 cut(s) 1164
NspI RCATGY 2 cut(s) 433, 1162
PaeI GCATGC 1 cut(s) 1162
PciI ACATGT 1 cut(s) 429
PfeI GAWTC 5 cut(s) 413, 510, 611, 1033, 1144
PflMI CCANNNNNTGG 1 cut(s) 1081
PfoI TCCNGGA 1 cut(s) 203
PkrI GCNGC 2 cut(s) 1129, 1132
PluTI GGCGCC 1 cut(s) 731
PscI ACATGT 1 cut(s) 429
Psp6I CCWGG 4 cut(s) 203, 233, 868, 967
PspGI CCWGG 4 cut(s) 203, 233, 868, 967
PspN4I GGNNCC 5 cut(s) 160, 202, 729, 929, 1169
PspPI GGNCC 2 cut(s) 928, 1177
PstNI CAGNNNCTG 1 cut(s) 1133
PsuI RGATCY 2 cut(s) 207, 227
PvuII CAGCTG 1 cut(s) 1133
RsaI GTAC 3 cut(s) 239, 940, 1106
RsaNI GTAC 3 cut(s) 238, 939, 1105
SaqAI TTAA 2 cut(s) 455, 624
SatI GCNGC 2 cut(s) 1128, 1131
Sau3AI GATC 7 cut(s) 207, 227, 343, 358, 502, 876, 1224
Sau96I GGNCC 2 cut(s) 928, 1177
ScrFI CCNGG 7 cut(s) 205, 235, 824, 870, 969, 1175, 1176
SexAI ACCWGGT 1 cut(s) 233
SfcI CTRYAG 1 cut(s) 634
SfoI GGCGCC 1 cut(s) 729
SinI GGWCC 1 cut(s) 928
SmaI CCCGGG 1 cut(s) 1176
SmlI CTYRAG 1 cut(s) 1055
SmoI CTYRAG 1 cut(s) 1055
SphI GCATGC 1 cut(s) 1162
Sse9I AATT 8 cut(s) 274, 316, 368, 473, 529, 737, 844, 983
SsiI CCGC 5 cut(s) 124, 129, 177, 507, 777
SspDI GGCGCC 1 cut(s) 727
SspMI CTAG 2 cut(s) 818, 903
StyD4I CCNGG 7 cut(s) 203, 233, 822, 868, 967, 1173, 1174
StyI CCWWGG 2 cut(s) 902, 931
TaaI ACNGT 3 cut(s) 136, 158, 341
TaiI ACGT 2 cut(s) 518, 1080
TaqI TCGA 4 cut(s) 306, 550, 680, 1093
TasI AATT 8 cut(s) 274, 316, 368, 473, 529, 737, 844, 983
TatI WGTACW 1 cut(s) 1104
TfiI GAWTC 5 cut(s) 413, 510, 611, 1033, 1144
Tru1I TTAA 2 cut(s) 455, 624
Tru9I TTAA 2 cut(s) 455, 624
TscAI CASTG 3 cut(s) 344, 715, 999
TseFI GTSAC 2 cut(s) 463, 920
TseI GCWGC 2 cut(s) 1127, 1130
Tsp45I GTSAC 2 cut(s) 463, 920
TspDTI ATGAA 3 cut(s) 49, 405, 1208
TspGWI ACGGA 1 cut(s) 1020
TspMI CCCGGG 1 cut(s) 1174
TspRI CASTG 3 cut(s) 344, 715, 999
Van91I CCANNNNNTGG 1 cut(s) 1081
VpaK11BI GGWCC 1 cut(s) 928
XapI RAATTY 4 cut(s) 368, 737, 844, 983
XceI RCATGY 2 cut(s) 433, 1162
XcmI CCANNNNNNNNNTGG 1 cut(s) 663
XmaI CCCGGG 1 cut(s) 1174
XmaJI CCTAGG 1 cut(s) 902
XspI CTAG 2 cut(s) 818, 903
Zsp2I ATGCAT 1 cut(s) 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.