Prupe.8G155600_v2.0.a1

Protein trichome birefringence-like 13

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
16685449 .. 16688770
3322 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G155600.1

Sequence Viewer

Length: 1257 bp
ATGGCCTCAAGAGAACACTCTCAGCACCAAAACCAGACGACAAGGAAAGTTCCACTCTTTCCTCTTCTCTCTCTCGTTTGCTTCGTTTCGATCTTCGCCGTCCTCTCCTCCATTAGAAAGATCTCCGTTCCTTCGCGACCTCACAGCAAGAGCTTCGAGTTCCGAAGGAGCTCGGGATCCGGCCGGAGGAGCCCGGGAGAGTCGTGCGACTTCTCGGATGGAAGGTGGATCTACGACCCGAATTCTCCTGCGAGGTACAACAATACCTGCAAGGAGATCTTCAAAGGCTGGAATTGTATTTCCGGCAACAAATTCAACGGCCGGGAGCTCGTCAAGTGGAGATGGCAGCCCGAGCATTGTGATCTCCCGCCATTCGATCCGGTTAGGTTTCTTCAGATGTACAGAGACACCAGCATTGGGTTTGTTGGTGATTCGTTGAACCGGAATATGTTTGTTTCGCTTTTCTGTTCTCTGAAACAAGTGTCAAGTGAGGTTAAGAAGTGGCGACCAGCTGGTGCTGATCGCGGGTTTACATTTCTTCAGTATAATCTTACCCTTGCATATCATCGAACAAACCTTTTGGCCCGTTATGGTAGGTGGTCTGCCAATGCTAATGGTGGGGTGCTGGAATCTCTAGGATATAAAGAGGGTTATAGAGTTGATGTTGACATTCCAGACAGTACATGGGCAGAAGCTCTAAGCTTTCATGACATTCTGATCTTTAACACAGGGCACTGGTGGTGGGCTCCTTCAAAGTTTGACCCTACAAAATCACCCATGCTTTTCTTTGAAAAGGGTCAGCCTGTGGTTCCTCCCGTACTCCCTGATGTTGGCCTTGATATGGCTCTGAAACACATGGCAATGTTTGTGGAGAACAGAACGCAGCCAGGTGCAATAAAATTCTTTCGCACTCAATCACCTAGGCATTTTGAAGGGGGTGATTGGGACCAAGGTGGTTCTTGTAACCGGGAAAAGCCTTTATTGCCAGTGCAGGTTGAAAAACTATTCTCTGTGAAGAATAATGGGACAAATGTGGAGGCACGCCTGGTCAATCAACACCTTTATAAGGTCCTCAAAGGGTTGGGTTTCCATATTTTGGACATAACCCACATGAGTGAGTTCAGAGCAGATGCCCATCCATCCGCAGCCGGTGGAAAGAAGCACGACGATTGCATGCACTGGTGCTTACCAGGAATAACAGATACTTGGAATGACTTGTTCATAGAGCAGCTAAATACTGTTAAATTTAGAAGTTAA

Protein Analysis

419

Amino Acids

47.81

Weight (kDa)

9.2

Isoelectric Point (pI)

45.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1065
Acc36I ACCTGC 2 cut(s) 275, 982
AccB7I CCANNNNNTGG 1 cut(s) 1096
AccII CGCG 2 cut(s) 136, 525
AciI CCGC 3 cut(s) 368, 525, 1143
AclWI GGATC 4 cut(s) 171, 184, 236, 371
AcoI YGGCCR 2 cut(s) 181, 319
AcsI RAATTY 4 cut(s) 241, 311, 899, 1244
AcuI CTGAAG 2 cut(s) 377, 524
AfaI GTAC 4 cut(s) 257, 401, 682, 819
AfiI CCNNNNNNNGG 6 cut(s) 186, 417, 830, 841, 1066, 1096
AgsI TTSAA 7 cut(s) 283, 316, 439, 753, 791, 932, 998
AjnI CCWGG 3 cut(s) 886, 1044, 1189
AleI CACNNNNGTG 1 cut(s) 1113
AluBI AGCT 7 cut(s) 153, 171, 328, 512, 695, 702, 1231
AluI AGCT 7 cut(s) 153, 171, 328, 512, 695, 702, 1231
Alw21I GWGCWC 2 cut(s) 173, 330
Alw26I GTCTC 1 cut(s) 399
AlwI GGATC 4 cut(s) 171, 184, 236, 371
Ama87I CYCGRG 3 cut(s) 172, 193, 350
AoxI GGCC 5 cut(s) 3, 181, 319, 582, 832
ApeKI GCWGC 4 cut(s) 346, 883, 1145, 1228
ApoI RAATTY 4 cut(s) 241, 311, 899, 1244
AspA2I CCTAGG 1 cut(s) 920
AspS9I GGNCC 3 cut(s) 583, 946, 1069
AsuC2I CCSGG 4 cut(s) 194, 195, 323, 968
AsuHPI GGTGA 4 cut(s) 440, 765, 909, 950
AvaI CYCGRG 3 cut(s) 172, 193, 350
AvaII GGWCC 2 cut(s) 946, 1069
AvrII CCTAGG 1 cut(s) 920
BaeGI GKGCMC 1 cut(s) 735
BamHI GGATCC 1 cut(s) 176
BanII GRGCYC 4 cut(s) 173, 194, 330, 748
Bbv12I GWGCWC 2 cut(s) 173, 330
BbvI GCAGC 4 cut(s) 358, 895, 1157, 1240
BccI CCATC 4 cut(s) 212, 336, 1143, 1147
BceAI ACGGC 2 cut(s) 83, 334
BcgI CGANNNNNNTGC 2 cut(s) 136, 170
BciT130I CCWGG 3 cut(s) 888, 1046, 1191
BcnI CCSGG 4 cut(s) 194, 195, 323, 968
BcoDI GTCTC 1 cut(s) 399
BfaI CTAG 2 cut(s) 635, 921
BfuAI ACCTGC 2 cut(s) 275, 982
BglII AGATCT 2 cut(s) 120, 276
BisI GCNGC 4 cut(s) 347, 884, 1146, 1229
BlnI CCTAGG 1 cut(s) 920
BlsI GCNGC 4 cut(s) 348, 885, 1147, 1230
Bme1390I CCNGG 7 cut(s) 194, 195, 323, 888, 968, 1046, 1191
Bme18I GGWCC 2 cut(s) 946, 1069
BmeT110I CYCGRG 3 cut(s) 172, 193, 350
BmgT120I GGNCC 3 cut(s) 583, 946, 1069
BmiI GGNNCC 5 cut(s) 178, 191, 747, 810, 947
BmrFI CCNGG 7 cut(s) 194, 195, 323, 888, 968, 1046, 1191
BmsI GCATC 1 cut(s) 1120
BpuMI CCSGG 4 cut(s) 194, 195, 323, 968
BsaBI GATNNNNATC 1 cut(s) 1134
BsaJI CCNNGG 3 cut(s) 193, 920, 949
BsaWI WCCGGW 2 cut(s) 379, 441
Bsc4I CCNNNNNNNGG 6 cut(s) 186, 417, 830, 841, 1066, 1096
Bse118I RCCGGY 1 cut(s) 1148
Bse1I ACTGG 3 cut(s) 740, 986, 1184
Bse3DI GCAATG 1 cut(s) 867
Bse8I GATNNNNATC 1 cut(s) 1134
BseBI CCWGG 3 cut(s) 888, 1046, 1191
BseDI CCNNGG 3 cut(s) 193, 920, 949
BseGI GGATG 3 cut(s) 223, 1135, 1139
BseJI GATNNNNATC 1 cut(s) 1134
BseLI CCNNNNNNNGG 6 cut(s) 186, 417, 830, 841, 1066, 1096
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 1 cut(s) 35
BseNI ACTGG 3 cut(s) 740, 986, 1184
BseRI GAGGAG 2 cut(s) 97, 202
BseSI GKGCMC 1 cut(s) 735
BseX3I CGGCCG 2 cut(s) 181, 319
BseXI GCAGC 4 cut(s) 358, 895, 1157, 1240
BsgI GTGCAG 1 cut(s) 1010
Bsh1236I CGCG 2 cut(s) 136, 525
Bsh1285I CGRYCG 2 cut(s) 184, 322
BshFI GGCC 5 cut(s) 5, 183, 321, 584, 834
BsiEI CGRYCG 2 cut(s) 184, 322
BsiHKAI GWGCWC 2 cut(s) 173, 330
BsiHKCI CYCGRG 3 cut(s) 172, 193, 350
BsiSI CCGG 9 cut(s) 180, 184, 194, 303, 322, 380, 442, 967, 1149
BslFI GGGAC 2 cut(s) 959, 1039
BslI CCNNNNNNNGG 6 cut(s) 186, 417, 830, 841, 1066, 1096
BsmAI GTCTC 1 cut(s) 399
BsmFI GGGAC 2 cut(s) 959, 1039
BsnI GGCC 5 cut(s) 5, 183, 321, 584, 834
BsoBI CYCGRG 3 cut(s) 172, 193, 350
Bsp1286I GDGCHC 5 cut(s) 173, 194, 330, 735, 748
Bsp1407I TGTACA 1 cut(s) 399
Bsp143I GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
Bsp68I TCGCGA 1 cut(s) 136
BspACI CCGC 3 cut(s) 368, 525, 1143
BspANI GGCC 5 cut(s) 5, 183, 321, 584, 834
BspCNI CTCAG 1 cut(s) 34
BspFNI CGCG 2 cut(s) 136, 525
BspHI TCATGA 1 cut(s) 706
BspLI GGNNCC 5 cut(s) 178, 191, 747, 810, 947
BspMI ACCTGC 2 cut(s) 275, 982
BspPI GGATC 4 cut(s) 171, 184, 236, 371
BsrDI GCAATG 1 cut(s) 867
BsrFI RCCGGY 1 cut(s) 1148
BsrGI TGTACA 1 cut(s) 399
BsrI ACTGG 3 cut(s) 740, 986, 1184
BssAI RCCGGY 1 cut(s) 1148
BssECI CCNNGG 3 cut(s) 193, 920, 949
BssMI GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
BssT1I CCWWGG 2 cut(s) 920, 949
Bst2UI CCWGG 3 cut(s) 888, 1046, 1191
Bst4CI ACNGT 2 cut(s) 680, 1240
Bst6I CTCTTC 1 cut(s) 69
BstAUI TGTACA 1 cut(s) 399
BstC8I GCNNGC 2 cut(s) 1042, 1175
BstDEI CTNAG 2 cut(s) 21, 698
BstENI CCTNNNNNAGG 1 cut(s) 1064
BstF5I GGATG 3 cut(s) 223, 1135, 1139
BstFNI CGCG 2 cut(s) 136, 525
BstKTI GATC 9 cut(s) 93, 123, 179, 231, 279, 364, 379, 523, 720
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
BstMCI CGRYCG 2 cut(s) 184, 322
BstMWI GCNNNNNNNGC 3 cut(s) 189, 352, 982
BstNI CCWGG 3 cut(s) 888, 1046, 1191
BstNSI RCATGY 1 cut(s) 1177
BstSCI CCNGG 7 cut(s) 192, 193, 321, 886, 966, 1044, 1189
BstSLI GKGCMC 1 cut(s) 735
BstUI CGCG 2 cut(s) 136, 525
BstV1I GCAGC 4 cut(s) 358, 895, 1157, 1240
BstX2I RGATCY 4 cut(s) 120, 176, 228, 276
BstYI RGATCY 4 cut(s) 120, 176, 228, 276
BstZI CGGCCG 2 cut(s) 181, 319
BsuRI GGCC 5 cut(s) 5, 183, 321, 584, 834
BtsCI GGATG 3 cut(s) 223, 1135, 1139
BtsIMutI CAGTG 3 cut(s) 733, 993, 1177
BtuMI TCGCGA 1 cut(s) 136
BveI ACCTGC 2 cut(s) 275, 982
Cac8I GCNNGC 2 cut(s) 1042, 1175
CciI TCATGA 1 cut(s) 706
Cfr10I RCCGGY 1 cut(s) 1148
Cfr13I GGNCC 3 cut(s) 583, 946, 1069
Cfr9I CCCGGG 1 cut(s) 193
Csp6I GTAC 4 cut(s) 256, 400, 681, 818
CspCI CAANNNNNGTGG 2 cut(s) 849, 884
CviAII CATG 6 cut(s) 684, 707, 778, 856, 1111, 1174
CviQI GTAC 4 cut(s) 256, 400, 681, 818
DdeI CTNAG 2 cut(s) 21, 698
DpnI GATC 9 cut(s) 92, 122, 178, 230, 278, 363, 378, 522, 719
DpnII GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
EaeI YGGCCR 2 cut(s) 181, 319
EagI CGGCCG 2 cut(s) 181, 319
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Ecl136II GAGCTC 2 cut(s) 171, 328
EclXI CGGCCG 2 cut(s) 181, 319
Eco130I CCWWGG 2 cut(s) 920, 949
Eco24I GRGCYC 4 cut(s) 173, 194, 330, 748
Eco47I GGWCC 2 cut(s) 946, 1069
Eco52I CGGCCG 2 cut(s) 181, 319
Eco53kI GAGCTC 2 cut(s) 171, 328
Eco57I CTGAAG 2 cut(s) 377, 524
Eco88I CYCGRG 3 cut(s) 172, 193, 350
EcoICRI GAGCTC 2 cut(s) 171, 328
EcoNI CCTNNNNNAGG 1 cut(s) 1064
EcoO109I RGGNCCY 1 cut(s) 1069
EcoRI GAATTC 1 cut(s) 241
EcoRII CCWGG 3 cut(s) 886, 1044, 1189
EcoT14I CCWWGG 2 cut(s) 920, 949
EcoT38I GRGCYC 4 cut(s) 173, 194, 330, 748
ErhI CCWWGG 2 cut(s) 920, 949
FaeI CATG 6 cut(s) 687, 710, 781, 859, 1114, 1177
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 2 cut(s) 959, 1039
FatI CATG 6 cut(s) 683, 706, 777, 855, 1110, 1173
FauI CCCGC 2 cut(s) 375, 518
Fnu4HI GCNGC 4 cut(s) 347, 884, 1146, 1229
FokI GGATG 3 cut(s) 230, 1122, 1126
FriOI GRGCYC 4 cut(s) 173, 194, 330, 748
Fsp4HI GCNGC 4 cut(s) 347, 884, 1146, 1229
FspBI CTAG 2 cut(s) 635, 921
GluI GCNGC 4 cut(s) 347, 884, 1146, 1229
HaeIII GGCC 5 cut(s) 5, 183, 321, 584, 834
HapII CCGG 9 cut(s) 180, 184, 194, 303, 322, 380, 442, 967, 1149
Hin1II CATG 6 cut(s) 687, 710, 781, 859, 1114, 1177
HincII GTYRAC 1 cut(s) 667
HindII GTYRAC 1 cut(s) 667
HindIII AAGCTT 1 cut(s) 700
HinfI GANTC 3 cut(s) 200, 431, 629
HpaII CCGG 9 cut(s) 180, 184, 194, 303, 322, 380, 442, 967, 1149
HphI GGTGA 4 cut(s) 440, 765, 909, 950
Hpy166II GTNNAC 2 cut(s) 531, 667
Hpy188I TCNGA 7 cut(s) 164, 217, 396, 474, 717, 849, 1124
Hpy188III TCNNGA 5 cut(s) 9, 135, 174, 674, 707
Hpy8I GTNNAC 2 cut(s) 531, 667
Hpy99I CGWCG 1 cut(s) 1169
HpyAV CCTTC 5 cut(s) 141, 159, 216, 759, 926
HpyCH4III ACNGT 2 cut(s) 680, 1240
HpyCH4V TGCA 6 cut(s) 270, 560, 893, 991, 1173, 1177
HpyF10VI GCNNNNNNNGC 3 cut(s) 189, 352, 982
HpyF3I CTNAG 2 cut(s) 21, 698
Hsp92II CATG 6 cut(s) 687, 710, 781, 859, 1114, 1177
Kzo9I GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
LmnI GCTCC 4 cut(s) 168, 189, 325, 751
Lsp1109I GCAGC 4 cut(s) 358, 895, 1157, 1240
LweI GCATC 1 cut(s) 1120
MaeI CTAG 2 cut(s) 635, 921
MaeIII GTNAC 1 cut(s) 962
MalI GATC 9 cut(s) 92, 122, 178, 230, 278, 363, 378, 522, 719
MboI GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
MboII GAAGA 6 cut(s) 56, 85, 271, 383, 530, 1027
MflI RGATCY 4 cut(s) 120, 176, 228, 276
MhlI GDGCHC 5 cut(s) 173, 194, 330, 735, 748
MluCI AATT 5 cut(s) 241, 292, 311, 899, 1244
MlyI GAGTC 1 cut(s) 209
MseI TTAA 4 cut(s) 495, 723, 1242, 1255
MslI CAYNNNNRTG 2 cut(s) 860, 1113
MspA1I CMGCKG 1 cut(s) 512
MspI CCGG 9 cut(s) 180, 184, 194, 303, 322, 380, 442, 967, 1149
MspR9I CCNGG 7 cut(s) 194, 195, 323, 888, 968, 1046, 1191
MvaI CCWGG 3 cut(s) 888, 1046, 1191
MvnI CGCG 2 cut(s) 136, 525
MwoI GCNNNNNNNGC 3 cut(s) 189, 352, 982
NciI CCSGG 4 cut(s) 194, 195, 323, 968
NdeII GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
NlaIII CATG 6 cut(s) 687, 710, 781, 859, 1114, 1177
NlaIV GGNNCC 5 cut(s) 178, 191, 747, 810, 947
NruI TCGCGA 1 cut(s) 136
NspI RCATGY 1 cut(s) 1177
OliI CACNNNNGTG 1 cut(s) 1113
PaeI GCATGC 1 cut(s) 1177
PagI TCATGA 1 cut(s) 706
PcsI WCGNNNNNNNCGW 1 cut(s) 81
PfeI GAWTC 2 cut(s) 431, 629
PflMI CCANNNNNTGG 1 cut(s) 1096
PkrI GCNGC 4 cut(s) 348, 885, 1147, 1230
PleI GAGTC 1 cut(s) 208
PpsI GAGTC 1 cut(s) 208
PpuMI RGGWCCY 1 cut(s) 1069
PsiI TTATAA 1 cut(s) 1065
Psp124BI GAGCTC 2 cut(s) 173, 330
Psp5II RGGWCCY 1 cut(s) 1069
Psp6I CCWGG 3 cut(s) 886, 1044, 1189
PspGI CCWGG 3 cut(s) 886, 1044, 1189
PspN4I GGNNCC 5 cut(s) 178, 191, 747, 810, 947
PspPI GGNCC 3 cut(s) 583, 946, 1069
PspPPI RGGWCCY 1 cut(s) 1069
PsuI RGATCY 4 cut(s) 120, 176, 228, 276
PvuII CAGCTG 1 cut(s) 512
RruI TCGCGA 1 cut(s) 136
RsaI GTAC 4 cut(s) 257, 401, 682, 819
RsaNI GTAC 4 cut(s) 256, 400, 681, 818
RseI CAYNNNNRTG 2 cut(s) 860, 1113
SacI GAGCTC 2 cut(s) 173, 330
SaqAI TTAA 4 cut(s) 495, 723, 1242, 1255
SatI GCNGC 4 cut(s) 347, 884, 1146, 1229
Sau3AI GATC 9 cut(s) 90, 120, 176, 228, 276, 361, 376, 520, 717
Sau96I GGNCC 3 cut(s) 583, 946, 1069
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 7 cut(s) 194, 195, 323, 888, 968, 1046, 1191
SduI GDGCHC 5 cut(s) 173, 194, 330, 735, 748
SfaNI GCATC 1 cut(s) 1120
SinI GGWCC 2 cut(s) 946, 1069
SmaI CCCGGG 1 cut(s) 195
SmiMI CAYNNNNRTG 2 cut(s) 860, 1113
SmlI CTYRAG 1 cut(s) 7
SmoI CTYRAG 1 cut(s) 7
SphI GCATGC 1 cut(s) 1177
Sse9I AATT 5 cut(s) 241, 292, 311, 899, 1244
SsiI CCGC 3 cut(s) 368, 525, 1143
SspMI CTAG 2 cut(s) 635, 921
SstI GAGCTC 2 cut(s) 173, 330
StyD4I CCNGG 7 cut(s) 192, 193, 321, 886, 966, 1044, 1189
StyI CCWWGG 2 cut(s) 920, 949
TaaI ACNGT 2 cut(s) 680, 1240
TaqI TCGA 4 cut(s) 89, 156, 375, 568
TasI AATT 5 cut(s) 241, 292, 311, 899, 1244
TatI WGTACW 2 cut(s) 399, 680
TfiI GAWTC 2 cut(s) 431, 629
Tru1I TTAA 4 cut(s) 495, 723, 1242, 1255
Tru9I TTAA 4 cut(s) 495, 723, 1242, 1255
TscAI CASTG 3 cut(s) 740, 993, 1184
TseI GCWGC 4 cut(s) 346, 883, 1145, 1228
TspDTI ATGAA 2 cut(s) 695, 1210
TspGWI ACGGA 1 cut(s) 115
TspMI CCCGGG 1 cut(s) 193
TspRI CASTG 3 cut(s) 740, 993, 1184
Van91I CCANNNNNTGG 1 cut(s) 1096
VpaK11BI GGWCC 2 cut(s) 946, 1069
XagI CCTNNNNNAGG 1 cut(s) 1064
XapI RAATTY 4 cut(s) 241, 311, 899, 1244
XceI RCATGY 1 cut(s) 1177
XcmI CCANNNNNNNNNTGG 1 cut(s) 681
XmaI CCCGGG 1 cut(s) 193
XmaJI CCTAGG 1 cut(s) 920
XspI CTAG 2 cut(s) 635, 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.