Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001797

Physical Location & Seq

Genomic Coordinates Reverse (-)

9093136 .. 9096414

Gene Structure 3279 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G21230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGGTGGTGGTGGTGATACAACAGATACCAATATGATGCAGAGAGTTAATTCTTCTTCTGGTACATCGTCTTCTTCGATCCCTAAACACAATCTTCACTTGAATCCTGCTCTTATCCGCTCTCACCATCACTTCCGTCACCCTTTCACCGGAGCTCCTCCACCGCCGATTCCACCCATTTCTCCTTACTCTCAGATCCCGGCGACTTTACAACCTAGACATTCTCGCTCTATGTCGCAACCGTCTTCTTTCTTCTCCTTTGATTCATTGCCGCCGTTAAATCCTTCTGCTCCGTCGGTTTCGGTGTCGGTGGAGGAGAAAACCGGTGCCGGATTTAGTCCTTCGTTGCCTCCGTCACCGTTTACGATGTGTCATTCTTCTAGCTCTAGGAACGCCGGAGATGGAGAGAATCTACCTCCGAGAAAGTCGCATAGGCGTTCGAATAGTGATGTTACTTTTGGGTTTAGTTCAATGATGTCTCAGAATCAAAAGTCTCCTCCTTTGAGTTCTTTGGAGAGATCGATCTCTGGTGAAGATACATCAGATTGGTCTAATTTGGTGAAGAAAGAACCGAGAGAAGGCTTCTACAAGGGAAGAAAACCAGAGGTTGAAGCAGCTATGGACGATGTTTTCACGGCTTATATGAATCTTGATAACATTGATGTCTTGAATTCTTTTGGAGGTGAAGATGGCAAGAATGGGAATGAGAATGTGGAGGAGATGGAGAGTAGTAGAGGTAGTGGTACAAAGAAGACGAATGGTGGAAGTAGTAGTGATTCTGAAGGAGATAGCAGTGCGAGTGGGAATGTGAAGGTTGCGTTGAGTTCTTCTTCTTCAGGCGTGAAGAGAAGAGCAGGTGGAGATATTGCTCCTACTGGTAGACATTACAGGAGTGTTTCTATGGACAGTTGTTTCATGGGGAAGTTGAATTTCGGCGACGAATCATCGCTAAAGCTTCCGCCTTCTTCATCAGCTAAAGTTTCCCCAACCAATTCAGGTGAAGGGAATTCAAGTGCTTATAGTGTTGAATTTGGAAACAGTGAGTTTACTGCAGCTGAAATGAAGAAGATTGCAGCTGATGAGAAACTCGCTGAGATTGTAATGGCTGACCCTAAGCGTGTTAAAAGAATCTTGGCGAACCGCGTATCTGCTGCACGTTCAAAGGAGCGGAAGACGCGATACATGGCAGAGTTGGAACACAAGGTGCAGACACTTCAGACTGAAGCTACTACATTATCGGCTCAGCTCACACATTTGCAGAGAGATTCTATGGGGTTGACAAACCAGAACAGTGAGCTGAAGTTTCGTCTTCAAGCTATGGAGCAGCAAGCACAACTCCGCGATGCTCTGTCAGAGAAACTGAATGAAGAAGTCCAGCGGTTGAAACTGGTGATAGGGGAGCCGAACCGCAGGCAAAGTGGGAGCAGCAGCAGCGAATCAAAGATGTCACTAAACCCGGAGATGTTTCAGCAGCTTAGCATAAGTCAGTTACAACACCAACAGATGCAGCATTCCAATCAGTGTAGCACAATGAAAGCAAAGCACACTTCAAACGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1 bZIP_2

Protein Analysis

519

Amino Acids

56.33

Weight (kDa)

8.56

Isoelectric Point (pI)

64.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	370 - 421	7.1e-08	Basic region leucine zipper
bZIP_1	PF00170	372 - 429	1.7e-09	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001797)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21230 AT2G21230 AT2G21230 AT2G21230 AT4G38900 AT4G38900 AT4G38900
fragaria_vesca	FvH4_2g10670 FvH4_2g10670 FvH4_2g10670 FvH4_2g10670 FvH4_2g10670 FvH4_2g38831 FvH4_2g38831
malus_domestica	MD05G1054500.v1.1 MD08G1016000.v1.1 MD08G1016200.v1.1 MD15G1015000.v1.1 MD15G1015100.v1.1
prunus_persica	Prupe.1G369300_v2.0.a1 Prupe.1G369300_v2.0.a1
pyrus_communis	pycom08g01400 pycom08g01410 pycom15g01300
rosa_chinensis	RchiOBHm_Chr6g0268361 RchiOBHm_Chr6g0302431
rosa_laevigata	RLG00000011172 RLG00000013914
rosa_multiflora	Rmu_co8451713.1_g000001 Rmu_sc0011714.1_g000001
rosa_roxburghii	Rroxscaffold_7G00165790 Rroxscaffold_7G00199840
rosa_rugosa	Rorug06G0040800 Rorug06G0314000 Rorug06G0314100 Rorug06G0314200 Rorug06G0314200
rosa_samantha	Rh6AG160900 Rh6AG427100 Rh6BG165300 Rh6BG475600 Rh6CG153200 Rh6CG439300 Rh6DG151000 Rh6DG426300
rosa_wichuraiana	Rw6G013910 Rw6G036950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	845
Acc36I	ACCTGC	1 cut(s)	845
AccB1I	GGYRCC	1 cut(s)	326
AccBSI	CCGCTC	2 cut(s)	120, 1168
AccI	GTMKAC	1 cut(s)	880
AccII	CGCG	3 cut(s)	1143, 1177, 1341
AciI	CCGC	9 cut(s)	118, 164, 272, 959, 1141, 1168, 1339, 1378, 1408
AclWI	GGATC	2 cut(s)	73, 190
AcsI	RAATTY	4 cut(s)	670, 928, 1006, 1028
AcuI	CTGAAG	5 cut(s)	801, 819, 1199, 1242, 1319
AdeI	CACNNNGTG	1 cut(s)	1204
AfaI	GTAC	2 cut(s)	64, 745
AfiI	CCNNNNNNNGG	2 cut(s)	149, 578
AgeI	ACCGGT	1 cut(s)	323
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	2 cut(s)	483, 498
AlwI	GGATC	2 cut(s)	73, 190
ApoI	RAATTY	4 cut(s)	670, 928, 1006, 1028
AsiGI	ACCGGT	1 cut(s)	323
AsuC2I	CCSGG	2 cut(s)	200, 1457
AsuII	TTCGAA	1 cut(s)	440
BanI	GGYRCC	1 cut(s)	326
BanII	GRGCYC	1 cut(s)	157
BarI	GAAGNNNNNNTAC	4 cut(s)	55, 87, 1163, 1195
BbsI	GAAGAC	5 cut(s)	63, 237, 758, 1178, 1301
Bbv12I	GWGCWC	1 cut(s)	157
BccI	CCATC	4 cut(s)	135, 395, 683, 715
BceAI	ACGGC	2 cut(s)	259, 651
BcnI	CCSGG	2 cut(s)	200, 1457
BcoDI	GTCTC	2 cut(s)	483, 498
BfaI	CTAG	4 cut(s)	216, 381, 387, 1558
BfmI	CTRYAG	1 cut(s)	1050
BfuAI	ACCTGC	1 cut(s)	845
BlpI	GCTNAGC	2 cut(s)	1242, 1475
Bme1390I	CCNGG	2 cut(s)	200, 1457
BmiI	GGNNCC	2 cut(s)	328, 1401
BmrFI	CCNGG	2 cut(s)	200, 1457
BmsI	GCATC	3 cut(s)	27, 1333, 1494
BpiI	GAAGAC	5 cut(s)	63, 237, 758, 1178, 1301
Bpu10I	CCTNAGC	1 cut(s)	1113
Bpu1102I	GCTNAGC	2 cut(s)	1242, 1475
Bpu14I	TTCGAA	1 cut(s)	440
BpuMI	CCSGG	2 cut(s)	200, 1457
Bsa29I	ATCGAT	1 cut(s)	521
BsaWI	WCCGGW	2 cut(s)	149, 323
BsaXI	ACNNNNNCTCC	2 cut(s)	139, 169
Bsc4I	CCNNNNNNNGG	2 cut(s)	149, 578
Bse118I	RCCGGY	1 cut(s)	323
Bse1I	ACTGG	2 cut(s)	880, 1392
Bse3DI	GCAATG	1 cut(s)	266
BseCI	ATCGAT	1 cut(s)	521
BseLI	CCNNNNNNNGG	2 cut(s)	149, 578
BseMI	GCAATG	1 cut(s)	266
BseMII	CTCAG	4 cut(s)	206, 494, 1083, 1256
BseNI	ACTGG	2 cut(s)	880, 1392
BseRI	GAGGAG	4 cut(s)	147, 329, 486, 731
BsgI	GTGCAG	2 cut(s)	1137, 1226
Bsh1236I	CGCG	3 cut(s)	1143, 1177, 1341
BshNI	GGYRCC	1 cut(s)	326
BshTI	ACCGGT	1 cut(s)	323
BshVI	ATCGAT	1 cut(s)	521
BsiHKAI	GWGCWC	1 cut(s)	157
BsiSI	CCGG	6 cut(s)	150, 200, 324, 330, 396, 1457
BslI	CCNNNNNNNGG	2 cut(s)	149, 578
BsmAI	GTCTC	2 cut(s)	483, 498
BsmI	GAATGC	1 cut(s)	1510
Bsp119I	TTCGAA	1 cut(s)	440
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp143I	GATC	4 cut(s)	78, 195, 518, 522
Bsp1720I	GCTNAGC	2 cut(s)	1242, 1475
BspACI	CCGC	9 cut(s)	118, 164, 272, 959, 1141, 1168, 1339, 1378, 1408
BspCNI	CTCAG	4 cut(s)	205, 493, 1084, 1255
BspDI	ATCGAT	1 cut(s)	521
BspFNI	CGCG	3 cut(s)	1143, 1177, 1341
BspLI	GGNNCC	2 cut(s)	328, 1401
BspMAI	CTGCAG	1 cut(s)	1054
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	2 cut(s)	73, 190
BspQI	GCTCTTC	1 cut(s)	844
BspT104I	TTCGAA	1 cut(s)	440
BspT107I	GGYRCC	1 cut(s)	326
BsrBI	CCGCTC	2 cut(s)	120, 1168
BsrDI	GCAATG	1 cut(s)	266
BsrFI	RCCGGY	1 cut(s)	323
BsrI	ACTGG	2 cut(s)	880, 1392
BssAI	RCCGGY	1 cut(s)	323
BssMI	GATC	4 cut(s)	78, 195, 518, 522
Bst4CI	ACNGT	5 cut(s)	243, 360, 908, 1040, 1292
Bst6I	CTCTTC	2 cut(s)	839, 844
BstBI	TTCGAA	1 cut(s)	440
BstC8I	GCNNGC	2 cut(s)	1329, 1412
BstDEI	CTNAG	6 cut(s)	192, 480, 1092, 1113, 1242, 1475
BstFNI	CGCG	3 cut(s)	1143, 1177, 1341
BstKTI	GATC	4 cut(s)	81, 198, 521, 525
BstMAI	GTCTC	2 cut(s)	483, 498
BstMBI	GATC	4 cut(s)	78, 195, 518, 522
BstMWI	GCNNNNNNNGC	2 cut(s)	1174, 1431
BstSCI	CCNGG	2 cut(s)	198, 1455
BstSFI	CTRYAG	1 cut(s)	1050
BstUI	CGCG	3 cut(s)	1143, 1177, 1341
BstV2I	GAAGAC	5 cut(s)	63, 237, 758, 1178, 1301
BstX2I	RGATCY	1 cut(s)	195
BstYI	RGATCY	1 cut(s)	195
Bsu15I	ATCGAT	1 cut(s)	521
BsuTUI	ATCGAT	1 cut(s)	521
BtgZI	GCGATG	2 cut(s)	930, 1356
BtsI	GCAGTG	1 cut(s)	799
BtsIMutI	CAGTG	4 cut(s)	799, 1045, 1297, 1526
BveI	ACCTGC	1 cut(s)	845
Cac8I	GCNNGC	2 cut(s)	1329, 1412
Cfr10I	RCCGGY	1 cut(s)	323
ClaI	ATCGAT	1 cut(s)	521
CseI	GACGC	1 cut(s)	1183
Csp6I	GTAC	2 cut(s)	63, 744
CspAI	ACCGGT	1 cut(s)	323
CviAII	CATG	2 cut(s)	916, 1183
CviQI	GTAC	2 cut(s)	63, 744
DdeI	CTNAG	6 cut(s)	192, 480, 1092, 1113, 1242, 1475
DpnI	GATC	4 cut(s)	80, 197, 520, 524
DpnII	GATC	4 cut(s)	78, 195, 518, 522
DraIII	CACNNNGTG	1 cut(s)	1204
Eam1104I	CTCTTC	2 cut(s)	839, 844
EarI	CTCTTC	2 cut(s)	839, 844
EciI	GGCGGA	1 cut(s)	948
Ecl136II	GAGCTC	1 cut(s)	155
Eco24I	GRGCYC	1 cut(s)	157
Eco53kI	GAGCTC	1 cut(s)	155
Eco57I	CTGAAG	5 cut(s)	801, 819, 1199, 1242, 1319
EcoICRI	GAGCTC	1 cut(s)	155
EcoRI	GAATTC	2 cut(s)	670, 1006
EcoT38I	GRGCYC	1 cut(s)	157
FaeI	CATG	2 cut(s)	919, 1186
FatI	CATG	2 cut(s)	915, 1182
FblI	GTMKAC	1 cut(s)	880
FriOI	GRGCYC	1 cut(s)	157
FspBI	CTAG	4 cut(s)	216, 381, 387, 1558
HapII	CCGG	6 cut(s)	150, 200, 324, 330, 396, 1457
HgaI	GACGC	1 cut(s)	1183
Hin1II	CATG	2 cut(s)	919, 1186
HincII	GTYRAC	1 cut(s)	1278
HindII	GTYRAC	1 cut(s)	1278
HindIII	AAGCTT	1 cut(s)	953
HpaII	CCGG	6 cut(s)	150, 200, 324, 330, 396, 1457
Hpy166II	GTNNAC	4 cut(s)	363, 881, 1047, 1278
Hpy188I	TCNGA	7 cut(s)	195, 420, 483, 544, 781, 1218, 1354
Hpy188III	TCNNGA	2 cut(s)	650, 667
Hpy8I	GTNNAC	4 cut(s)	363, 881, 1047, 1278
Hpy99I	CGWCG	2 cut(s)	298, 941
HpyAV	CCTTC	7 cut(s)	294, 351, 572, 776, 805, 972, 995
HpyCH4III	ACNGT	5 cut(s)	243, 360, 908, 1040, 1292
HpyCH4IV	ACGT	1 cut(s)	1156
HpyCH4V	TGCA	7 cut(s)	40, 1052, 1073, 1154, 1207, 1258, 1507
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1174, 1431
HpyF3I	CTNAG	6 cut(s)	192, 480, 1092, 1113, 1242, 1475
HpySE526I	ACGT	1 cut(s)	1156
Hsp92II	CATG	2 cut(s)	919, 1186
Kzo9I	GATC	4 cut(s)	78, 195, 518, 522
LguI	GCTCTTC	1 cut(s)	844
LmnI	GCTCC	8 cut(s)	152, 160, 295, 874, 1165, 1321, 1399, 1422
LweI	GCATC	3 cut(s)	27, 1333, 1494
MaeI	CTAG	4 cut(s)	216, 381, 387, 1558
MaeII	ACGT	1 cut(s)	1156
MaeIII	GTNAC	5 cut(s)	137, 354, 451, 1446, 1488
MalI	GATC	4 cut(s)	80, 197, 520, 524
MbiI	CCGCTC	2 cut(s)	120, 1168
MboI	GATC	4 cut(s)	78, 195, 518, 522
MflI	RGATCY	1 cut(s)	195
MhlI	GDGCHC	1 cut(s)	157
MluCI	AATT	7 cut(s)	49, 553, 670, 928, 991, 1006, 1028
MmeI	TCCRAC	1 cut(s)	1173
MnlI	CCTC	9 cut(s)	168, 307, 360, 426, 507, 598, 674, 709, 728
MseI	TTAA	3 cut(s)	48, 278, 1122
MspA1I	CMGCKG	3 cut(s)	1055, 1076, 1378
MspI	CCGG	6 cut(s)	150, 200, 324, 330, 396, 1457
MspR9I	CCNGG	2 cut(s)	200, 1457
Mva1269I	GAATGC	1 cut(s)	1510
MvnI	CGCG	3 cut(s)	1143, 1177, 1341
MwoI	GCNNNNNNNGC	2 cut(s)	1174, 1431
NciI	CCSGG	2 cut(s)	200, 1457
NdeII	GATC	4 cut(s)	78, 195, 518, 522
NlaIII	CATG	2 cut(s)	919, 1186
NlaIV	GGNNCC	2 cut(s)	328, 1401
NmuCI	GTSAC	3 cut(s)	137, 354, 1446
NspV	TTCGAA	1 cut(s)	440
PaqCI	CACCTGC	1 cut(s)	845
PciSI	GCTCTTC	1 cut(s)	844
PcsI	WCGNNNNNNNCGW	2 cut(s)	74, 350
PctI	GAATGC	1 cut(s)	1510
PinAI	ACCGGT	1 cut(s)	323
Psp124BI	GAGCTC	1 cut(s)	157
PspN4I	GGNNCC	2 cut(s)	328, 1401
PstI	CTGCAG	1 cut(s)	1054
PsuI	RGATCY	1 cut(s)	195
PvuII	CAGCTG	2 cut(s)	1055, 1076
RsaI	GTAC	2 cut(s)	64, 745
RsaNI	GTAC	2 cut(s)	63, 744
SacI	GAGCTC	1 cut(s)	157
SapI	GCTCTTC	1 cut(s)	844
SaqAI	TTAA	3 cut(s)	48, 278, 1122
Sau3AI	GATC	4 cut(s)	78, 195, 518, 522
ScrFI	CCNGG	2 cut(s)	200, 1457
SduI	GDGCHC	1 cut(s)	157
SfaNI	GCATC	3 cut(s)	27, 1333, 1494
SfcI	CTRYAG	1 cut(s)	1050
SfuI	TTCGAA	1 cut(s)	440
Sse9I	AATT	7 cut(s)	49, 553, 670, 928, 991, 1006, 1028
SsiI	CCGC	9 cut(s)	118, 164, 272, 959, 1141, 1168, 1339, 1378, 1408
SspMI	CTAG	4 cut(s)	216, 381, 387, 1558
SstI	GAGCTC	1 cut(s)	157
StyD4I	CCNGG	2 cut(s)	198, 1455
TaaI	ACNGT	5 cut(s)	243, 360, 908, 1040, 1292
TaiI	ACGT	1 cut(s)	1159
TaqI	TCGA	3 cut(s)	77, 440, 521
TasI	AATT	7 cut(s)	49, 553, 670, 928, 991, 1006, 1028
TauI	GCSGC	1 cut(s)	274
Tru1I	TTAA	3 cut(s)	48, 278, 1122
Tru9I	TTAA	3 cut(s)	48, 278, 1122
TscAI	CASTG	4 cut(s)	799, 1045, 1297, 1526
TseFI	GTSAC	3 cut(s)	137, 354, 1446
Tsp45I	GTSAC	3 cut(s)	137, 354, 1446
TspDTI	ATGAA	7 cut(s)	255, 659, 904, 957, 1076, 1380, 1547
TspGWI	ACGGA	3 cut(s)	125, 282, 342
TspRI	CASTG	4 cut(s)	799, 1045, 1297, 1526
XapI	RAATTY	4 cut(s)	670, 928, 1006, 1028
XmiI	GTMKAC	1 cut(s)	880
XspI	CTAG	4 cut(s)	216, 381, 387, 1558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.