MD15G1015000.v1.1
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
882281 .. 885779
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1015000.v1.1.491

Sequence Viewer

Length: 1743 bp
ATGGAGGGCAGTGATGACACTGGTAGTGGTAGTGGTAGTGGTAGTGCCAAGCAGCAGCGGCCTAATCCAACTTTTGGGTCGTCGTCTTTCTCGATTCCTAAGCCAAACAGCAATTTAGATATTCCGAATTTCAACCCTTCTTCTCAGATGGGTCTCCCCATGCGTCAATCTTCCCCTAGTTTGAGTCCTGAGAACAGTAAGAGGCCCGGGATTCCTCCTTCGCACCCGAATAACCACAATTCGATGCCTTTTTCGAATGTCATGAGGCCTCAATCGCGTTCTTGGCAGTTGGGAACACAGAATTTGAGCCCAGGGTCATCCCACACTAGGTCTTTGTCTCAGCCTCCGGTTTTCTCGCTTGATTCCCTGCCCCCATTGAGCCCTTTGACTTACCGCGACCCCTCGGGTCCTTCTCCGTCTGACCCGAATTCAGTTGAGGTTTCCATGGAGGAGACTGTTAATTCTCAGGGACCTTCACTTCGTTCCCCAGTTGCTGATAGCAGTGCATTTTGGGCTGGAGACGGCCTTCCCCCTCGCAGAAGGCACCGGCGCTCTAACAGTGATGTTCCGTTAGGATTCTCAGCTATCATTCAATCTTCGCCTCAGTTGATTCCCATTGGGCGGCAAACAAGTTTGGATGGATCGGCTTCTGGGAGAGACAATTCAGGGATTGGAAAGCCAAATCAGCTGATGAAACAGGGATCAAATGGGAATGCAGAGGGAATGGATGAGAGGAAATCGGGGGGAGAGATTGCGGATGATTTGTTTAATGCATACATGAATTTGGAGAACATTGACAAAATGAACTCGTCCGGTAATGAGGATAAGGATTTGGATAGCAGAGCCAGTGGCTCGAAGACAAACGGGTGTGAGAGTAGTGATAATGAAGTGGAAAGTGGTCTAAAGGGGAATGGTAACGGCAGGCAGAGGCCAGGTTCTGGTTTTCCGAATGAGAGGAGGGAAGGGCTCAAGAGGACTGCTGGCGGTGATGTTGTATCTAATGTCCGACACTGTAGGAGCATTTCAATGGATAGTTATATGGAAAGTCTGAATTTCGATGATGAACCATTGAAACCCCTGCCGCTAGGCCAACAATCACCCAGCACTTCGCTTGATGGGAACTCAGCCAAGTTCAGCATGGAGTTTGGAAGTGGTGAGTTCAATGCAATTGAGTTGAAAAAGATAATGGAAAATGAGAAACTTGCTGAGATAGCACTATCAGACCCCAAACGTGCAAAGAGGATTTTGGCTAACCGTCAGTCAGCTGCTCGTTCCAAGGAGAGGAAGATGCGATACATTCAAGAATTGGAACACAAGGTGCAAACCCTGCAGACGGAGGCAACCACTTTGTCTGCCCAGTTTACAAAATTGCAGAGAGACTCTGTGGGTCTTACAAGTGAGAACAATGAGTTGAAATTTCGGCTTCAAGCTCTGGAACAACAGGCCCAACTGAAAGATGCTTTAAATGAAGCCTTGACTGGAGAAGTGCAGCGACTAAAGCTTGCCGCTGGAGAGCTCGGTGGAGGAGAAGGCCACCTTTCGAACCGCATGGCGCAGCAATTATCTATGAACCAGCAAATGCTTCAACTGCAGCATCTCAACCTCTATCAAATGCAACAGCAGCCACAGCACCAAGCTCAACAGAACACGCAACCGCAGCAGTTCATGCAGCAGCCTCAGCAAAATCGACCTCCGCATCACCAGAACGGCAACGCTGCCGCTAAGCCGGAGTTGAGCCAATAG

Protein Analysis

581

Amino Acids

63.17

Weight (kDa)

6.86

Isoelectric Point (pI)

60.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 407 - 459 4e-08 Basic region leucine zipper
bZIP_1 PF00170 410 - 468 1.6e-08 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 543
AccB7I CCANNNNNTGG 2 cut(s) 74, 938
AccII CGCG 2 cut(s) 277, 396
AclWI GGATC 2 cut(s) 649, 709
AcsI RAATTY 6 cut(s) 127, 301, 427, 781, 1051, 1415
AdeI CACNNNGTG 1 cut(s) 1318
AfiI CCNNNNNNNGG 6 cut(s) 74, 327, 621, 938, 1281, 1333
AjnI CCWGG 2 cut(s) 310, 931
AluBI AGCT 7 cut(s) 584, 688, 1265, 1430, 1501, 1516, 1637
AluI AGCT 7 cut(s) 584, 688, 1265, 1430, 1501, 1516, 1637
Alw21I GWGCWC 1 cut(s) 1518
Alw26I GTCTC 6 cut(s) 158, 342, 446, 513, 651, 1371
AlwI GGATC 2 cut(s) 649, 709
AlwNI CAGNNNCTG 2 cut(s) 494, 938
Ama87I CYCGRG 2 cut(s) 206, 403
AoxI GGCC 8 cut(s) 59, 203, 266, 523, 929, 1087, 1443, 1531
ApoI RAATTY 6 cut(s) 127, 301, 427, 781, 1051, 1415
ArsI GACNNNNNNTTYG 2 cut(s) 462, 494
AspLEI GCGC 2 cut(s) 552, 1555
AspS9I GGNCC 4 cut(s) 204, 407, 470, 1444
AsuC2I CCSGG 2 cut(s) 207, 208
AsuHPI GGTGA 4 cut(s) 998, 1089, 1166, 1691
AsuII TTCGAA 2 cut(s) 254, 1541
AvaI CYCGRG 2 cut(s) 206, 403
AvaII GGWCC 2 cut(s) 407, 470
BanI GGYRCC 1 cut(s) 543
BanII GRGCYC 4 cut(s) 311, 383, 969, 1518
BarI GAAGNNNNNNTAC 2 cut(s) 1277, 1309
BbsI GAAGAC 1 cut(s) 863
Bbv12I GWGCWC 1 cut(s) 1518
BbvCI CCTCAGC 1 cut(s) 1677
BccI CCATC 3 cut(s) 142, 632, 1109
BceAI ACGGC 3 cut(s) 538, 934, 1723
BciT130I CCWGG 2 cut(s) 312, 933
BcnI CCSGG 2 cut(s) 207, 208
BcoDI GTCTC 6 cut(s) 158, 342, 446, 513, 651, 1371
BfaI CTAG 3 cut(s) 177, 327, 1085
BfmI CTRYAG 3 cut(s) 1012, 1328, 1589
BfoI RGCGCY 1 cut(s) 553
BlpI GCTNAGC 1 cut(s) 1722
Bme1390I CCNGG 4 cut(s) 207, 208, 312, 933
Bme18I GGWCC 2 cut(s) 407, 470
BmeT110I CYCGRG 2 cut(s) 206, 403
BmgT120I GGNCC 4 cut(s) 204, 407, 470, 1444
BmiI GGNNCC 3 cut(s) 408, 471, 545
BmrFI CCNGG 4 cut(s) 207, 208, 312, 933
BmrI ACTGGG 2 cut(s) 482, 1351
BmsI GCATC 5 cut(s) 234, 1278, 1447, 1603, 1705
BmuI ACTGGG 2 cut(s) 482, 1351
BpiI GAAGAC 1 cut(s) 863
BpmI CTGGAG 3 cut(s) 537, 1500, 1530
Bpu10I CCTNAGC 2 cut(s) 99, 1677
Bpu1102I GCTNAGC 1 cut(s) 1722
Bpu14I TTCGAA 2 cut(s) 254, 1541
BpuEI CTTGAG 1 cut(s) 953
BpuMI CCSGG 2 cut(s) 207, 208
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 6 cut(s) 206, 310, 311, 402, 444, 1275
BsaWI WCCGGW 2 cut(s) 346, 812
Bsc4I CCNNNNNNNGG 6 cut(s) 74, 327, 621, 938, 1281, 1333
Bse118I RCCGGY 1 cut(s) 546
Bse1I ACTGG 5 cut(s) 25, 488, 846, 1357, 1483
BseBI CCWGG 2 cut(s) 312, 933
BseDI CCNNGG 6 cut(s) 206, 310, 311, 402, 444, 1275
BseGI GGATG 4 cut(s) 317, 643, 733, 763
BseLI CCNNNNNNNGG 6 cut(s) 74, 327, 621, 938, 1281, 1333
BseMII CTCAG 9 cut(s) 158, 180, 353, 479, 594, 617, 1137, 1197, 1691
BseNI ACTGG 5 cut(s) 25, 488, 846, 1357, 1483
BseRI GAGGAG 3 cut(s) 464, 970, 1539
BseYI CCCAGC 1 cut(s) 1100
BsgI GTGCAG 1 cut(s) 1508
Bsh1236I CGCG 2 cut(s) 277, 396
BshFI GGCC 8 cut(s) 61, 205, 268, 525, 931, 1089, 1445, 1533
BshNI GGYRCC 1 cut(s) 543
BsiHKAI GWGCWC 1 cut(s) 1518
BsiHKCI CYCGRG 2 cut(s) 206, 403
BsiSI CCGG 5 cut(s) 207, 347, 547, 813, 1727
BslFI GGGAC 1 cut(s) 483
BslI CCNNNNNNNGG 6 cut(s) 74, 327, 621, 938, 1281, 1333
BsmAI GTCTC 6 cut(s) 158, 342, 446, 513, 651, 1371
BsmBI CGTCTC 1 cut(s) 513
BsmFI GGGAC 1 cut(s) 483
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 8 cut(s) 61, 205, 268, 525, 931, 1089, 1445, 1533
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 2 cut(s) 206, 403
Bsp119I TTCGAA 2 cut(s) 254, 1541
Bsp1286I GDGCHC 4 cut(s) 311, 383, 969, 1518
Bsp143I GATC 2 cut(s) 641, 701
Bsp1720I GCTNAGC 1 cut(s) 1722
Bsp19I CCATGG 1 cut(s) 444
BspANI GGCC 8 cut(s) 61, 205, 268, 525, 931, 1089, 1445, 1533
BspCNI CTCAG 9 cut(s) 157, 181, 352, 478, 593, 616, 1136, 1198, 1690
BspFNI CGCG 2 cut(s) 277, 396
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 3 cut(s) 408, 471, 545
BspMAI CTGCAG 2 cut(s) 1332, 1593
BspPI GGATC 2 cut(s) 649, 709
BspT104I TTCGAA 2 cut(s) 254, 1541
BspT107I GGYRCC 1 cut(s) 543
BspTNI GGTCTC 1 cut(s) 158
BsrFI RCCGGY 1 cut(s) 546
BsrI ACTGG 5 cut(s) 25, 488, 846, 1357, 1483
BssAI RCCGGY 1 cut(s) 546
BssECI CCNNGG 6 cut(s) 206, 310, 311, 402, 444, 1275
BssMI GATC 2 cut(s) 641, 701
BssT1I CCWWGG 2 cut(s) 444, 1275
Bst2UI CCWGG 2 cut(s) 312, 933
Bst4CI ACNGT 5 cut(s) 197, 457, 560, 1013, 1256
BstAPI GCANNNNNTGC 2 cut(s) 1327, 1666
BstBI TTCGAA 2 cut(s) 254, 1541
BstC8I GCNNGC 3 cut(s) 923, 982, 1503
BstDSI CCRYGG 1 cut(s) 444
BstF5I GGATG 4 cut(s) 317, 643, 733, 763
BstFNI CGCG 2 cut(s) 277, 396
BstH2I RGCGCY 1 cut(s) 553
BstHHI GCGC 2 cut(s) 552, 1555
BstKTI GATC 2 cut(s) 644, 704
BstMAI GTCTC 6 cut(s) 158, 342, 446, 513, 651, 1371
BstMBI GATC 2 cut(s) 641, 701
BstNI CCWGG 2 cut(s) 312, 933
BstSCI CCNGG 4 cut(s) 205, 206, 310, 931
BstSFI CTRYAG 3 cut(s) 1012, 1328, 1589
BstUI CGCG 2 cut(s) 277, 396
BstV2I GAAGAC 1 cut(s) 863
BsuRI GGCC 8 cut(s) 61, 205, 268, 525, 931, 1089, 1445, 1533
BtgI CCRYGG 1 cut(s) 444
BtsCI GGATG 4 cut(s) 317, 643, 733, 763
BtsI GCAGTG 2 cut(s) 16, 508
BtsIMutI CAGTG 6 cut(s) 16, 18, 508, 565, 853, 1009
Cac8I GCNNGC 3 cut(s) 923, 982, 1503
CaiI CAGNNNCTG 2 cut(s) 494, 938
CciI TCATGA 1 cut(s) 261
CfoI GCGC 2 cut(s) 552, 1555
Cfr10I RCCGGY 1 cut(s) 546
Cfr13I GGNCC 4 cut(s) 204, 407, 470, 1444
Cfr9I CCCGGG 1 cut(s) 206
CseI GACGC 1 cut(s) 152
CviAII CATG 7 cut(s) 160, 262, 445, 778, 1138, 1549, 1666
DpnI GATC 2 cut(s) 643, 703
DpnII GATC 2 cut(s) 641, 701
DraI TTTAAA 1 cut(s) 1464
DraIII CACNNNGTG 1 cut(s) 1318
Ecl136II GAGCTC 1 cut(s) 1516
Eco130I CCWWGG 2 cut(s) 444, 1275
Eco147I AGGCCT 1 cut(s) 268
Eco24I GRGCYC 4 cut(s) 311, 383, 969, 1518
Eco31I GGTCTC 1 cut(s) 158
Eco47I GGWCC 2 cut(s) 407, 470
Eco53kI GAGCTC 1 cut(s) 1516
Eco88I CYCGRG 2 cut(s) 206, 403
EcoICRI GAGCTC 1 cut(s) 1516
EcoO109I RGGNCCY 2 cut(s) 407, 470
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 2 cut(s) 310, 931
EcoT14I CCWWGG 2 cut(s) 444, 1275
EcoT22I ATGCAT 1 cut(s) 775
EcoT38I GRGCYC 4 cut(s) 311, 383, 969, 1518
ErhI CCWWGG 2 cut(s) 444, 1275
Esp3I CGTCTC 1 cut(s) 513
FaeI CATG 7 cut(s) 163, 265, 448, 781, 1141, 1552, 1669
FalI AAGNNNNNCTT 2 cut(s) 1521, 1553
FaqI GGGAC 1 cut(s) 483
FatI CATG 7 cut(s) 159, 261, 444, 777, 1137, 1548, 1665
FokI GGATG 4 cut(s) 304, 650, 740, 770
FriOI GRGCYC 4 cut(s) 311, 383, 969, 1518
FspBI CTAG 3 cut(s) 177, 327, 1085
GlaI GCGC 2 cut(s) 551, 1554
GsaI CCCAGC 1 cut(s) 1104
GsuI CTGGAG 3 cut(s) 537, 1500, 1530
HaeII RGCGCY 1 cut(s) 553
HaeIII GGCC 8 cut(s) 61, 205, 268, 525, 931, 1089, 1445, 1533
HapII CCGG 5 cut(s) 207, 347, 547, 813, 1727
HgaI GACGC 1 cut(s) 152
HhaI GCGC 2 cut(s) 552, 1555
Hin1II CATG 7 cut(s) 163, 265, 448, 781, 1141, 1552, 1669
Hin6I GCGC 2 cut(s) 550, 1553
HinP1I GCGC 2 cut(s) 550, 1553
HindIII AAGCTT 1 cut(s) 1499
HinfI GANTC 7 cut(s) 94, 184, 211, 362, 576, 610, 1379
HpaII CCGG 5 cut(s) 207, 347, 547, 813, 1727
HphI GGTGA 4 cut(s) 998, 1089, 1166, 1691
Hpy166II GTNNAC 1 cut(s) 1362
Hpy188I TCNGA 7 cut(s) 126, 147, 421, 948, 1007, 1050, 1222
Hpy188III TCNNGA 6 cut(s) 91, 188, 262, 970, 1301, 1433
Hpy8I GTNNAC 1 cut(s) 1362
Hpy99I CGWCG 1 cut(s) 85
HpyAV CCTTC 8 cut(s) 147, 228, 420, 483, 534, 536, 956, 1523
HpyCH4III ACNGT 5 cut(s) 197, 457, 560, 1013, 1256
HpyCH4IV ACGT 1 cut(s) 1231
HpySE526I ACGT 1 cut(s) 1231
Hsp92II CATG 7 cut(s) 163, 265, 448, 781, 1141, 1552, 1669
HspAI GCGC 2 cut(s) 550, 1553
Kzo9I GATC 2 cut(s) 641, 701
LmnI GCTCC 1 cut(s) 1017
LweI GCATC 5 cut(s) 234, 1278, 1447, 1603, 1705
MaeI CTAG 3 cut(s) 177, 327, 1085
MaeII ACGT 1 cut(s) 1231
MaeIII GTNAC 1 cut(s) 914
MalI GATC 2 cut(s) 643, 703
MboI GATC 2 cut(s) 641, 701
MboII GAAGA 5 cut(s) 132, 162, 588, 868, 1297
MfeI CAATTG 1 cut(s) 1167
MhlI GDGCHC 4 cut(s) 311, 383, 969, 1518
MlyI GAGTC 2 cut(s) 193, 1373
MmeI TCCRAC 2 cut(s) 92, 1030
Mph1103I ATGCAT 1 cut(s) 775
MseI TTAA 3 cut(s) 459, 768, 1463
MslI CAYNNNNRTG 1 cut(s) 1025
MspA1I CMGCKG 4 cut(s) 58, 688, 1265, 1508
MspI CCGG 5 cut(s) 207, 347, 547, 813, 1727
MspR9I CCNGG 4 cut(s) 207, 208, 312, 933
MunI CAATTG 1 cut(s) 1167
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 2 cut(s) 312, 933
MvnI CGCG 2 cut(s) 277, 396
NciI CCSGG 2 cut(s) 207, 208
NcoI CCATGG 1 cut(s) 444
NdeII GATC 2 cut(s) 641, 701
NlaIII CATG 7 cut(s) 163, 265, 448, 781, 1141, 1552, 1669
NlaIV GGNNCC 3 cut(s) 408, 471, 545
NsiI ATGCAT 1 cut(s) 775
NspV TTCGAA 2 cut(s) 254, 1541
PagI TCATGA 1 cut(s) 261
PasI CCCWGGG 1 cut(s) 311
PceI AGGCCT 1 cut(s) 268
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PctI GAATGC 1 cut(s) 718
PfeI GAWTC 5 cut(s) 94, 211, 362, 576, 610
PflMI CCANNNNNTGG 2 cut(s) 74, 938
PleI GAGTC 2 cut(s) 192, 1373
PpsI GAGTC 2 cut(s) 192, 1373
PpuMI RGGWCCY 2 cut(s) 407, 470
Psp124BI GAGCTC 1 cut(s) 1518
Psp5II RGGWCCY 2 cut(s) 407, 470
Psp6I CCWGG 2 cut(s) 310, 931
PspFI CCCAGC 1 cut(s) 1100
PspGI CCWGG 2 cut(s) 310, 931
PspN4I GGNNCC 3 cut(s) 408, 471, 545
PspPI GGNCC 4 cut(s) 204, 407, 470, 1444
PspPPI RGGWCCY 2 cut(s) 407, 470
PstI CTGCAG 2 cut(s) 1332, 1593
PstNI CAGNNNCTG 2 cut(s) 494, 938
PvuII CAGCTG 2 cut(s) 688, 1265
RseI CAYNNNNRTG 1 cut(s) 1025
SacI GAGCTC 1 cut(s) 1518
SaqAI TTAA 3 cut(s) 459, 768, 1463
Sau3AI GATC 2 cut(s) 641, 701
Sau96I GGNCC 4 cut(s) 204, 407, 470, 1444
SchI GAGTC 2 cut(s) 193, 1373
ScrFI CCNGG 4 cut(s) 207, 208, 312, 933
SduI GDGCHC 4 cut(s) 311, 383, 969, 1518
SfaNI GCATC 5 cut(s) 234, 1278, 1447, 1603, 1705
SfcI CTRYAG 3 cut(s) 1012, 1328, 1589
SfuI TTCGAA 2 cut(s) 254, 1541
SgrAI CRCCGGYG 1 cut(s) 546
SinI GGWCC 2 cut(s) 407, 470
SmaI CCCGGG 1 cut(s) 208
SmiMI CAYNNNNRTG 1 cut(s) 1025
SmlI CTYRAG 1 cut(s) 968
SmoI CTYRAG 1 cut(s) 968
SseBI AGGCCT 1 cut(s) 268
SspMI CTAG 3 cut(s) 177, 327, 1085
SstI GAGCTC 1 cut(s) 1518
StuI AGGCCT 1 cut(s) 268
StyD4I CCNGG 4 cut(s) 205, 206, 310, 931
StyI CCWWGG 2 cut(s) 444, 1275
TaaI ACNGT 5 cut(s) 197, 457, 560, 1013, 1256
TaiI ACGT 1 cut(s) 1234
TaqI TCGA 7 cut(s) 92, 242, 254, 854, 1056, 1541, 1687
TauI GCSGC 5 cut(s) 61, 625, 1084, 1508, 1721
TfiI GAWTC 5 cut(s) 94, 211, 362, 576, 610
Tru1I TTAA 3 cut(s) 459, 768, 1463
Tru9I TTAA 3 cut(s) 459, 768, 1463
TscAI CASTG 6 cut(s) 16, 25, 508, 565, 853, 1016
TspDTI ATGAA 8 cut(s) 707, 794, 818, 900, 1077, 1482, 1583, 1654
TspGWI ACGGA 3 cut(s) 405, 558, 1349
TspMI CCCGGG 1 cut(s) 206
TspRI CASTG 6 cut(s) 16, 25, 508, 565, 853, 1016
Van91I CCANNNNNTGG 2 cut(s) 74, 938
VpaK11BI GGWCC 2 cut(s) 407, 470
XapI RAATTY 6 cut(s) 127, 301, 427, 781, 1051, 1415
XcmI CCANNNNNNNNNTGG 1 cut(s) 1135
XmaI CCCGGG 1 cut(s) 206
XspI CTAG 3 cut(s) 177, 327, 1085
Zsp2I ATGCAT 1 cut(s) 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.