FvH4_2g10670
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
9428075 .. 9432564
4490 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g10670.t4

Sequence Viewer

Length: 1758 bp
ATGGGTGACACTGAAGAAGGTAATAGTGATATGATGCAAAGGCTTCAATCTTCGTTTGGAACATCTTCATCATCGATTCTGAAACAGCCGTTATCTATGGACCAGCTGAACATACCCCAATTCAGCTCTTCACAAATGCGTTCACGCCATTTTGCACAGAGCTTTACTGGGGATACCAGTAAAAGAATGGGGATACCACCCTCACACCCAAACCACATCCCACCACTTTCACCTTATTCTCAGATCCCGGTTGCCAGGCCAATTAACCAGACAATGGGCTCACAGAATTTTAGTCCAGGACCGAGCCATTCGCGGTCATTGTCGCAACCAGCCTTCTTTTCACTTGATTCACTGCCCCCATTGAGCCCATCCCCCTACCGTGATTCCCCATCCACCTCCATGTCTGAGGTGGATGTGTCAATGGAGGATAGGGATGCAAGTTCACATTCCTTGTTGCCCCCATCGCCATTCGGCAGGGCTAATTTCTCAAGGGTGGGCGAGAGTTTGCCCCCTCGTAAGGCTCATAGGAGGTCTAATAGTGATATACCATTCGGGTTCTCTACAATGATGCAACAAGCTCTACCCCCCATTGCTCCCATGAGGGGTTCGGGTAGTGTGGACCTGTCAATGTCTGGTACAGAAAATTCAGGGATGGTTAAGCCAGCTCAGTTGGTTAAAAAGGAATCTAGTTGGGAAAGAGCTGGCGATAACAATGTGGAAGGGACGGGTGAGAGGAAGTCTGAAGGGGAAGTAGTGGATGATTTGTTTTCCGCATATATGAATTTGGATAGCATTGATGCTTTGAACTCTTCGGGGACTGATGACAAGAATGGTAATGAGAATCGTGAGGATATGGATAGTAGTAGAGCAAGTGGGACCAAGACAAACTGTGACAGCAGTGATAATGAAGTGGAAAGCAGCGTTAATGAAAGTGGAGGAATGCAGAGACCGGGATTGAATTCTTTGACCAATATGAGAGAAGGGATCAAAAGGAGTGCGGGGGGAGATATTGCACCGACCACTCGTCACTTCAGAAGTGTCTCCATGGACAGTTTTATGGGTAAGCTGCAATTTGGTGATGAGTCACCTAAACTACCACCTTCGCCTGGAACTCGGCCAGGACAACTTTCCCCCAGCAATTCAATTGATACAAATTCAAATGCCTTTAGCTTGGAGTTTGGAAATGGTGAGTTCAGTGGGGCTGAAATGAAGAAAATTATGGCTAATGAAAAACTTGCAGAGATTGCATTGACCGATCCAAAGCGTGCAAAAAGGATTTTGGCAAATCGTCAATCAGCAGCCCGATCTAAAGAACGGAAAATGCGCTACATTTCAGAGTTGGAACACAAGGTTCAGACTCTACAGACGGAAGCAACAACACTGTCCGCACAGCTTACACTATTACAAAGAGATTCTGTTGGTCTCAGTAACCAGAATAATGAGTTGAAGTTTCGCCTTCAAGCTATGGAACAACAGGCCCAACTCAGAGATGCTCTAAATGAAGCCCTAACATCAGAGGTCCAACGTTTGAAGCTTGCTACGACAGATCTGAATGGGGAATCTCACCCTTCTAAGAGCATGATTAACGCTCAGAGGTTCCAGCTCCAGCAGCAATCACCTCAGACTCAGTTCAACATACATCAACAACAGCAGCAACAACAACAGCAACAGCAGCAGCAACAACAGCAACAGCATCAAACACCTCAGCAGCTGCAGGAAAATGGCACAACCACCTCGAAGCCCGAGTCAGATCAATAA

Protein Analysis

586

Amino Acids

64.33

Weight (kDa)

5.96

Isoelectric Point (pI)

62.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 274
AccII CGCG 1 cut(s) 313
AciI CCGC 4 cut(s) 313, 771, 998, 1386
AclI AACGTT 1 cut(s) 1525
AclWI GGATC 3 cut(s) 238, 992, 1250
AcoI YGGCCR 1 cut(s) 1115
AcsI RAATTY 5 cut(s) 286, 643, 781, 958, 1153
AcuI CTGAAG 3 cut(s) 33, 762, 1015
AfaI GTAC 1 cut(s) 637
AfiI CCNNNNNNNGG 4 cut(s) 274, 517, 602, 1106
AgsI TTSAA 9 cut(s) 47, 805, 958, 1143, 1158, 1447, 1460, 1531, 1633
AhdI GACNNNNNGTC 1 cut(s) 1023
AjnI CCWGG 4 cut(s) 254, 295, 1105, 1117
Alw26I GTCTC 3 cut(s) 940, 1045, 1427
AlwI GGATC 3 cut(s) 238, 992, 1250
AlwNI CAGNNNCTG 1 cut(s) 1711
Ama87I CYCGRG 1 cut(s) 1742
AoxI GGCC 3 cut(s) 257, 1115, 1476
ApeKI GCWGC 9 cut(s) 918, 1066, 1298, 1609, 1651, 1672, 1675, 1708, 1711
ApoI RAATTY 5 cut(s) 286, 643, 781, 958, 1153
ArsI GACNNNNNNTTYG 1 cut(s) 1730
Asp700I GAANNNNTTC 1 cut(s) 64
AspLEI GCGC 1 cut(s) 1326
AspS9I GGNCC 6 cut(s) 100, 299, 619, 876, 1477, 1519
AsuC2I CCSGG 2 cut(s) 248, 951
AsuHPI GGTGA 8 cut(s) 17, 222, 740, 1077, 1088, 1199, 1556, 1608
AvaI CYCGRG 1 cut(s) 1742
AvaII GGWCC 5 cut(s) 100, 299, 619, 876, 1519
BanII GRGCYC 2 cut(s) 281, 368
BbvCI CCTCAGC 1 cut(s) 1704
BbvI GCAGC 9 cut(s) 930, 1053, 1310, 1621, 1663, 1684, 1687, 1698, 1720
BccI CCATC 4 cut(s) 376, 397, 469, 646
BceAI ACGGC 1 cut(s) 73
BciT130I CCWGG 4 cut(s) 256, 297, 1107, 1119
BciVI GTATCC 2 cut(s) 166, 186
BcnI CCSGG 2 cut(s) 248, 951
BcoDI GTCTC 3 cut(s) 940, 1045, 1427
BfaI CTAG 1 cut(s) 687
BfmI CTRYAG 2 cut(s) 1361, 1712
BfuI GTATCC 2 cut(s) 166, 186
BglII AGATCT 1 cut(s) 1546
BisI GCNGC 9 cut(s) 919, 1067, 1299, 1610, 1652, 1673, 1676, 1709, 1712
BlsI GCNGC 9 cut(s) 920, 1068, 1300, 1611, 1653, 1674, 1677, 1710, 1713
Bme1390I CCNGG 6 cut(s) 248, 256, 297, 951, 1107, 1119
Bme18I GGWCC 5 cut(s) 100, 299, 619, 876, 1519
BmeRI GACNNNNNGTC 1 cut(s) 1023
BmeT110I CYCGRG 1 cut(s) 1742
BmgT120I GGNCC 6 cut(s) 100, 299, 619, 876, 1477, 1519
BmiI GGNNCC 2 cut(s) 877, 1598
BmrFI CCNGG 6 cut(s) 248, 256, 297, 951, 1107, 1119
BmrI ACTGGG 1 cut(s) 177
BmsI GCATC 6 cut(s) 24, 424, 558, 787, 1480, 1702
BmuI ACTGGG 1 cut(s) 177
BpmI CTGGAG 1 cut(s) 1589
Bpu10I CCTNAGC 1 cut(s) 1704
BpuEI CTTGAG 1 cut(s) 472
BpuMI CCSGG 2 cut(s) 248, 951
Bsa29I ATCGAT 1 cut(s) 74
BsaI GGTCTC 2 cut(s) 940, 1427
BsaJI CCNNGG 1 cut(s) 1044
Bsc4I CCNNNNNNNGG 4 cut(s) 274, 517, 602, 1106
Bse1I ACTGG 2 cut(s) 172, 177
Bse3DI GCAATG 1 cut(s) 588
BseBI CCWGG 4 cut(s) 256, 297, 1107, 1119
BseCI ATCGAT 1 cut(s) 74
BseDI CCNNGG 1 cut(s) 1044
BseGI GGATG 7 cut(s) 216, 368, 389, 418, 439, 657, 763
BseLI CCNNNNNNNGG 4 cut(s) 274, 517, 602, 1106
BseMI GCAATG 1 cut(s) 588
BseMII CTCAG 9 cut(s) 254, 396, 680, 1438, 1498, 1604, 1634, 1640, 1718
BseNI ACTGG 2 cut(s) 172, 177
BseXI GCAGC 9 cut(s) 930, 1053, 1310, 1621, 1663, 1684, 1687, 1698, 1720
BseYI CCCAGC 1 cut(s) 1133
Bsh1236I CGCG 1 cut(s) 313
BshFI GGCC 3 cut(s) 259, 1117, 1478
BshVI ATCGAT 1 cut(s) 74
BsiHKCI CYCGRG 1 cut(s) 1742
BsiSI CCGG 2 cut(s) 248, 950
BslFI GGGAC 3 cut(s) 736, 829, 889
BslI CCNNNNNNNGG 4 cut(s) 274, 517, 602, 1106
BsmAI GTCTC 3 cut(s) 940, 1045, 1427
BsmFI GGGAC 3 cut(s) 736, 829, 889
BsmI GAATGC 1 cut(s) 945
BsnI GGCC 3 cut(s) 259, 1117, 1478
Bso31I GGTCTC 2 cut(s) 940, 1427
BsoBI CYCGRG 1 cut(s) 1742
Bsp1286I GDGCHC 2 cut(s) 281, 368
Bsp143I GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
Bsp19I CCATGG 1 cut(s) 1044
BspACI CCGC 4 cut(s) 313, 771, 998, 1386
BspANI GGCC 3 cut(s) 259, 1117, 1478
BspCNI CTCAG 9 cut(s) 253, 397, 679, 1437, 1497, 1603, 1633, 1639, 1717
BspDI ATCGAT 1 cut(s) 74
BspFNI CGCG 1 cut(s) 313
BspLI GGNNCC 2 cut(s) 877, 1598
BspMAI CTGCAG 1 cut(s) 1716
BspPI GGATC 3 cut(s) 238, 992, 1250
BspQI GCTCTTC 1 cut(s) 133
BspTNI GGTCTC 2 cut(s) 940, 1427
BsrDI GCAATG 1 cut(s) 588
BsrI ACTGG 2 cut(s) 172, 177
BssECI CCNNGG 1 cut(s) 1044
BssMI GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
BssT1I CCWWGG 1 cut(s) 1044
Bst2UI CCWGG 4 cut(s) 256, 297, 1107, 1119
Bst4CI ACNGT 4 cut(s) 380, 890, 1052, 1383
Bst6I CTCTTC 2 cut(s) 133, 814
BstAPI GCANNNNNTGC 1 cut(s) 1244
BstC8I GCNNGC 4 cut(s) 663, 703, 1266, 1536
BstDSI CCRYGG 1 cut(s) 1044
BstF5I GGATG 7 cut(s) 216, 368, 389, 418, 439, 657, 763
BstFNI CGCG 1 cut(s) 313
BstHHI GCGC 1 cut(s) 1326
BstKTI GATC 6 cut(s) 246, 987, 1258, 1307, 1549, 1753
BstMAI GTCTC 3 cut(s) 940, 1045, 1427
BstMBI GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
BstMWI GCNNNNNNNGC 5 cut(s) 463, 1244, 1609, 1672, 1684
BstNI CCWGG 4 cut(s) 256, 297, 1107, 1119
BstSCI CCNGG 6 cut(s) 246, 254, 295, 949, 1105, 1117
BstSFI CTRYAG 2 cut(s) 1361, 1712
BstUI CGCG 1 cut(s) 313
BstV1I GCAGC 9 cut(s) 930, 1053, 1310, 1621, 1663, 1684, 1687, 1698, 1720
BstX2I RGATCY 2 cut(s) 243, 1546
BstYI RGATCY 2 cut(s) 243, 1546
Bsu15I ATCGAT 1 cut(s) 74
BsuI GTATCC 2 cut(s) 166, 186
BsuRI GGCC 3 cut(s) 259, 1117, 1478
BsuTUI ATCGAT 1 cut(s) 74
BtgI CCRYGG 1 cut(s) 1044
BtgZI GCGATG 1 cut(s) 447
BtsCI GGATG 7 cut(s) 216, 368, 389, 418, 439, 657, 763
BtsI GCAGTG 2 cut(s) 350, 904
BtsIMutI CAGTG 5 cut(s) 9, 350, 904, 1201, 1379
Cac8I GCNNGC 4 cut(s) 663, 703, 1266, 1536
CaiI CAGNNNCTG 1 cut(s) 1711
CfoI GCGC 1 cut(s) 1326
Cfr13I GGNCC 6 cut(s) 100, 299, 619, 876, 1477, 1519
ClaI ATCGAT 1 cut(s) 74
Csp6I GTAC 1 cut(s) 636
CviAII CATG 4 cut(s) 400, 598, 1045, 1579
CviQI GTAC 1 cut(s) 636
DpnI GATC 6 cut(s) 245, 986, 1257, 1306, 1548, 1752
DpnII GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
DriI GACNNNNNGTC 1 cut(s) 1023
EaeI YGGCCR 1 cut(s) 1115
Eam1104I CTCTTC 2 cut(s) 133, 814
Eam1105I GACNNNNNGTC 1 cut(s) 1023
EarI CTCTTC 2 cut(s) 133, 814
Eco130I CCWWGG 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 281, 368
Eco31I GGTCTC 2 cut(s) 940, 1427
Eco47I GGWCC 5 cut(s) 100, 299, 619, 876, 1519
Eco57I CTGAAG 3 cut(s) 33, 762, 1015
Eco88I CYCGRG 1 cut(s) 1742
EcoRI GAATTC 1 cut(s) 958
EcoRII CCWGG 4 cut(s) 254, 295, 1105, 1117
EcoT14I CCWWGG 1 cut(s) 1044
EcoT38I GRGCYC 2 cut(s) 281, 368
ErhI CCWWGG 1 cut(s) 1044
FaeI CATG 4 cut(s) 403, 601, 1048, 1582
FaqI GGGAC 3 cut(s) 736, 829, 889
FatI CATG 4 cut(s) 399, 597, 1044, 1578
FauI CCCGC 1 cut(s) 991
Fnu4HI GCNGC 9 cut(s) 919, 1067, 1299, 1610, 1652, 1673, 1676, 1709, 1712
FokI GGATG 7 cut(s) 203, 355, 376, 425, 446, 664, 770
FriOI GRGCYC 2 cut(s) 281, 368
Fsp4HI GCNGC 9 cut(s) 919, 1067, 1299, 1610, 1652, 1673, 1676, 1709, 1712
FspBI CTAG 1 cut(s) 687
GlaI GCGC 1 cut(s) 1325
GluI GCNGC 9 cut(s) 919, 1067, 1299, 1610, 1652, 1673, 1676, 1709, 1712
GsaI CCCAGC 1 cut(s) 1137
GsuI CTGGAG 1 cut(s) 1589
HaeIII GGCC 3 cut(s) 259, 1117, 1478
HapII CCGG 2 cut(s) 248, 950
HhaI GCGC 1 cut(s) 1326
Hin1II CATG 4 cut(s) 403, 601, 1048, 1582
Hin6I GCGC 1 cut(s) 1324
HinP1I GCGC 1 cut(s) 1324
HindIII AAGCTT 1 cut(s) 1532
HpaII CCGG 2 cut(s) 248, 950
HphI GGTGA 8 cut(s) 17, 222, 740, 1077, 1088, 1199, 1556, 1608
Hpy166II GTNNAC 3 cut(s) 143, 443, 619
Hpy188III TCNNGA 1 cut(s) 845
Hpy8I GTNNAC 3 cut(s) 143, 443, 619
HpyAV CCTTC 8 cut(s) 11, 343, 713, 737, 974, 1110, 1466, 1578
HpyCH4III ACNGT 4 cut(s) 380, 890, 1052, 1383
HpyCH4IV ACGT 1 cut(s) 1525
HpyF10VI GCNNNNNNNGC 5 cut(s) 463, 1244, 1609, 1672, 1684
HpySE526I ACGT 1 cut(s) 1525
Hsp92II CATG 4 cut(s) 403, 601, 1048, 1582
HspAI GCGC 1 cut(s) 1324
Kzo9I GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
LguI GCTCTTC 1 cut(s) 133
LmnI GCTCC 2 cut(s) 598, 1608
Lsp1109I GCAGC 9 cut(s) 930, 1053, 1310, 1621, 1663, 1684, 1687, 1698, 1720
LweI GCATC 6 cut(s) 24, 424, 558, 787, 1480, 1702
MaeI CTAG 1 cut(s) 687
MaeII ACGT 1 cut(s) 1525
MaeIII GTNAC 5 cut(s) 5, 890, 1025, 1083, 1427
MalI GATC 6 cut(s) 245, 986, 1257, 1306, 1548, 1752
MboI GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
MboII GAAGA 6 cut(s) 26, 42, 57, 120, 801, 1222
MfeI CAATTG 1 cut(s) 1143
MflI RGATCY 2 cut(s) 243, 1546
MhlI GDGCHC 2 cut(s) 281, 368
MlyI GAGTC 4 cut(s) 1091, 1351, 1618, 1754
MmeI TCCRAC 2 cut(s) 1320, 1546
MroXI GAANNNNTTC 1 cut(s) 64
MseI TTAA 5 cut(s) 264, 657, 675, 924, 1584
MslI CAYNNNNRTG 1 cut(s) 398
MspA1I CMGCKG 2 cut(s) 106, 1711
MspI CCGG 2 cut(s) 248, 950
MspR9I CCNGG 6 cut(s) 248, 256, 297, 951, 1107, 1119
MunI CAATTG 1 cut(s) 1143
Mva1269I GAATGC 1 cut(s) 945
MvaI CCWGG 4 cut(s) 256, 297, 1107, 1119
MvnI CGCG 1 cut(s) 313
MwoI GCNNNNNNNGC 5 cut(s) 463, 1244, 1609, 1672, 1684
NciI CCSGG 2 cut(s) 248, 951
NcoI CCATGG 1 cut(s) 1044
NdeII GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
NlaIII CATG 4 cut(s) 403, 601, 1048, 1582
NlaIV GGNNCC 2 cut(s) 877, 1598
NmeAIII GCCGAG 1 cut(s) 1093
NmuCI GTSAC 4 cut(s) 5, 890, 1025, 1083
PciSI GCTCTTC 1 cut(s) 133
PctI GAATGC 1 cut(s) 945
PdmI GAANNNNTTC 1 cut(s) 64
PfeI GAWTC 7 cut(s) 76, 347, 383, 683, 841, 1412, 1559
PflMI CCANNNNNTGG 1 cut(s) 274
PfoI TCCNGGA 1 cut(s) 295
PkrI GCNGC 9 cut(s) 920, 1068, 1300, 1611, 1653, 1674, 1677, 1710, 1713
PleI GAGTC 4 cut(s) 1090, 1351, 1618, 1753
PpsI GAGTC 4 cut(s) 1090, 1351, 1618, 1753
Psp1406I AACGTT 1 cut(s) 1525
Psp6I CCWGG 4 cut(s) 254, 295, 1105, 1117
PspFI CCCAGC 1 cut(s) 1133
PspGI CCWGG 4 cut(s) 254, 295, 1105, 1117
PspN4I GGNNCC 2 cut(s) 877, 1598
PspPI GGNCC 6 cut(s) 100, 299, 619, 876, 1477, 1519
PstI CTGCAG 1 cut(s) 1716
PstNI CAGNNNCTG 1 cut(s) 1711
PsuI RGATCY 2 cut(s) 243, 1546
PvuII CAGCTG 2 cut(s) 106, 1711
RsaI GTAC 1 cut(s) 637
RsaNI GTAC 1 cut(s) 636
RseI CAYNNNNRTG 1 cut(s) 398
SapI GCTCTTC 1 cut(s) 133
SaqAI TTAA 5 cut(s) 264, 657, 675, 924, 1584
SatI GCNGC 9 cut(s) 919, 1067, 1299, 1610, 1652, 1673, 1676, 1709, 1712
Sau3AI GATC 6 cut(s) 243, 984, 1255, 1304, 1546, 1750
Sau96I GGNCC 6 cut(s) 100, 299, 619, 876, 1477, 1519
SchI GAGTC 4 cut(s) 1091, 1351, 1618, 1754
ScrFI CCNGG 6 cut(s) 248, 256, 297, 951, 1107, 1119
SduI GDGCHC 2 cut(s) 281, 368
SfaNI GCATC 6 cut(s) 24, 424, 558, 787, 1480, 1702
SfcI CTRYAG 2 cut(s) 1361, 1712
SinI GGWCC 5 cut(s) 100, 299, 619, 876, 1519
SmiMI CAYNNNNRTG 1 cut(s) 398
SmlI CTYRAG 1 cut(s) 487
SmoI CTYRAG 1 cut(s) 487
SsiI CCGC 4 cut(s) 313, 771, 998, 1386
SspMI CTAG 1 cut(s) 687
StyD4I CCNGG 6 cut(s) 246, 254, 295, 949, 1105, 1117
StyI CCWWGG 1 cut(s) 1044
TaaI ACNGT 4 cut(s) 380, 890, 1052, 1383
TaiI ACGT 1 cut(s) 1528
TaqI TCGA 2 cut(s) 74, 1736
TaqII GACCGA 2 cut(s) 316, 1268
TfiI GAWTC 7 cut(s) 76, 347, 383, 683, 841, 1412, 1559
Tru1I TTAA 5 cut(s) 264, 657, 675, 924, 1584
Tru9I TTAA 5 cut(s) 264, 657, 675, 924, 1584
TscAI CASTG 5 cut(s) 16, 357, 904, 1201, 1386
TseFI GTSAC 4 cut(s) 5, 890, 1025, 1083
TseI GCWGC 9 cut(s) 918, 1066, 1298, 1609, 1651, 1672, 1675, 1708, 1711
Tsp45I GTSAC 4 cut(s) 5, 890, 1025, 1083
TspDTI ATGAA 7 cut(s) 57, 794, 921, 942, 1223, 1242, 1515
TspGWI ACGGA 2 cut(s) 1330, 1382
TspRI CASTG 5 cut(s) 16, 357, 904, 1201, 1386
Van91I CCANNNNNTGG 1 cut(s) 274
VpaK11BI GGWCC 5 cut(s) 100, 299, 619, 876, 1519
XapI RAATTY 5 cut(s) 286, 643, 781, 958, 1153
XcmI CCANNNNNNNNNTGG 2 cut(s) 184, 406
XmnI GAANNNNTTC 1 cut(s) 64
XspI CTAG 1 cut(s) 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.