FvH4_2g38831
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
28026109 .. 28030196
4088 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g38831.t2

Sequence Viewer

Length: 1659 bp
ATGGAGGGGAGTGATGAGACGAGTAGTGGTAAGCAAAGACCTAATTCTCCATTCGGGTCCTCACCGCCTGCTTCTTTTGCGAGGCCAAATCATCATTTAGATATTCCCAATTTCAATTCAGCTCAGGTAGGTTTACCCATGCGTCAATTGTCGCCGGCGCCGAGCCCGGAGACGACTTCCAAGAGACTCGGCATCCCTCCTTCGCATCCCAACAACCCCATGAGGCCTCAACCGCCTTCTTGGAGTTTGAGCCCATCAGGCGGTTCAGCTCATTCAAGGTCGTTGTCTCAGCCCGCGTTTTTCTCGCTTGACAGTCTGCCCCCTTTGAGCCCTTTGACTTCTTACCGCGAGCCCACGGCTTCTTCGCTCTCGGACCCGAATTCCGCGGATGTGAACATGGAGGAGTCTGTGGTGAACTCTCATGCTCAGTCCATGAGGTCTCCGGTGACCGACGGCAATCCGTTTTGGGCCGGCGACGGGCTGCCTCCGAGGAGGGGGCACAGGAGGTCTAATAGCGATGTGCCGTTGGGATTCTCGGCTGTGATTCAGTCCTCGCCGCAGTTGATTCCGATTGGGCGCAGGGCTAGCTTTGATGGGAAGGAGGCTGCGAAGCCGGTGCAGCTGGTGAGGCAAGGTTCGAGTGGGGATAACAATGGTGAGTTGATGGGGGATAGGAAATCAGGTGGGGAAGTTGTGGATGATTTGTTTAGTGCTTATATGAATTTGGAGAATATTGATAGAATGAACTCGCCGGGTGGTGAGGACAAGGATTTGGATAGTAGGGCGAGTGGCTCGAAGAATGGGGGCGAGAGTAGTGATAATGAGGTGGAGAGTGGGGTGAATGGGAAGTGGTCGAGTTCTGGTTTTTCGAGTGAGAAGAAGGAAGGGGGGAAGAGGGCTGCTGGTGGAGATGCAGGGCGAACTGTCCGACATTGTAGGAGTGTTTCAATGGACAGTTATATGGATAATTTGAATTTCGATGATGAACTGATGAAGCCTCTGCCTCTGGGAAGTCAGGTGGGTCAGCTGTCACCTAGCACTTCGGTGGATGGGAACTCGGCTAAGTTCAGCATGGAGTTTGGAAGTGGCGAGTTCAATGCAATTGAGCTGAAAAAGATAATGGAGAGTGAAAAGCTTTCTGAGATAGCTGTATCAGACCCCAAACGTGCAAAGAGGATTTTAGCTAACCGTCAGTCAGCTGCTCGTTCCAAGGAGAGGAAGATGCGATACATTGTAGAATTGGAACACAAGGTGCAAACCCTGCAGACTGAGGCAACGACTTTATCTGCCCAGGTCACTAAGTTGCAGAGGGACTCTATGGGTTTTACAAGTGAGAACAATGAGCTGAAATTCCGACTTCAAGCCATGGAGCAACAAGCACAACTTAAAGATGCTTTAAATGAGGCCTTGACAGGAGAAGTCCAGCGCCTAAGAATTTCTGCTGCAGAGCTTGGAGGAGAAGGCAACCTTTCAAACCGCATGTCCCAGCAGCTTTCAATTAATCAACAAATGCTCCAACTACAGCAACTCAACCTCTACCAGATGCACCAACAGCCACAACAGCAAAGTCAACAACAGATGATGCAGCAGCCACAACAAAACAGACCACCTTCCCATCAGCAGAATGGCAGTGCTTCAAAGCATGAATCAATGCAATAG

Protein Analysis

553

Amino Acids

60.1

Weight (kDa)

6.45

Isoelectric Point (pI)

63.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 157
AccII CGCG 3 cut(s) 296, 348, 386
AciI CCGC 9 cut(s) 65, 233, 261, 294, 346, 384, 386, 557, 1477
AcsI RAATTY 5 cut(s) 379, 721, 973, 1349, 1434
AcyI GRCGYC 1 cut(s) 158
AdeI CACNNNGTG 1 cut(s) 1252
AfiI CCNNNNNNNGG 4 cut(s) 260, 477, 494, 1215
AgsI TTSAA 9 cut(s) 115, 276, 948, 973, 1096, 1361, 1473, 1497, 1638
AjnI CCWGG 1 cut(s) 1290
AleI CACNNNNGTG 1 cut(s) 1043
Alw26I GTCTC 5 cut(s) 11, 164, 178, 291, 444
AoxI GGCC 4 cut(s) 83, 224, 468, 1404
ApeKI GCWGC 9 cut(s) 481, 605, 619, 899, 1199, 1442, 1489, 1585, 1588
ApoI RAATTY 5 cut(s) 379, 721, 973, 1349, 1434
ArsI GACNNNNNNTTYG 2 cut(s) 1466, 1498
AseI ATTAAT 1 cut(s) 1500
AspLEI GCGC 3 cut(s) 160, 579, 1428
AspS9I GGNCC 3 cut(s) 57, 373, 468
AsuC2I CCSGG 2 cut(s) 167, 753
AsuHPI GGTGA 8 cut(s) 54, 424, 457, 637, 668, 770, 850, 1023
AsuNHI GCTAGC 1 cut(s) 584
AvaII GGWCC 2 cut(s) 57, 373
BaeGI GKGCMC 1 cut(s) 501
BanI GGYRCC 1 cut(s) 157
BanII GRGCYC 4 cut(s) 167, 254, 332, 354
BarI GAAGNNNNNNTAC 2 cut(s) 1211, 1243
BbvI GCAGC 9 cut(s) 468, 592, 631, 886, 1186, 1429, 1501, 1597, 1600
BccI CCATC 5 cut(s) 262, 587, 658, 1043, 1623
BceAI ACGGC 3 cut(s) 372, 469, 508
BcgI CGANNNNNNTGC 4 cut(s) 598, 632, 1079, 1113
BciT130I CCWGG 1 cut(s) 1292
BcnI CCSGG 2 cut(s) 167, 753
BcoDI GTCTC 5 cut(s) 11, 164, 178, 291, 444
BfaI CTAG 2 cut(s) 585, 1035
BfmI CTRYAG 3 cut(s) 1262, 1443, 1520
BfoI RGCGCY 2 cut(s) 161, 1429
BglI GCCNNNNNGGC 1 cut(s) 258
Bme1390I CCNGG 3 cut(s) 167, 753, 1292
Bme18I GGWCC 2 cut(s) 57, 373
BmgT120I GGNCC 3 cut(s) 57, 373, 468
BmiI GGNNCC 3 cut(s) 58, 159, 375
BmrFI CCNGG 3 cut(s) 167, 753, 1292
BmsI GCATC 7 cut(s) 201, 214, 901, 1212, 1381, 1533, 1572
BmtI GCTAGC 1 cut(s) 588
Bpu10I CCTNAGC 1 cut(s) 123
BpuMI CCSGG 2 cut(s) 167, 753
BsaHI GRCGYC 1 cut(s) 158
BsaI GGTCTC 1 cut(s) 444
BsaJI CCNNGG 6 cut(s) 354, 384, 488, 1209, 1290, 1365
BsaWI WCCGGW 1 cut(s) 442
BsaXI ACNNNNNCTCC 2 cut(s) 1497, 1527
Bsc4I CCNNNNNNNGG 4 cut(s) 260, 477, 494, 1215
Bse118I RCCGGY 3 cut(s) 154, 470, 613
BseBI CCWGG 1 cut(s) 1292
BseDI CCNNGG 6 cut(s) 354, 384, 488, 1209, 1290, 1365
BseGI GGATG 5 cut(s) 192, 205, 394, 703, 1054
BseLI CCNNNNNNNGG 4 cut(s) 260, 477, 494, 1215
BseMII CTCAG 5 cut(s) 137, 302, 440, 1131, 1260
BseRI GAGGAG 3 cut(s) 416, 505, 1470
BseSI GKGCMC 1 cut(s) 501
BseXI GCAGC 9 cut(s) 468, 592, 631, 886, 1186, 1429, 1501, 1597, 1600
BseYI CCCAGC 1 cut(s) 1485
BsgI GTGCAG 1 cut(s) 638
Bsh1236I CGCG 3 cut(s) 296, 348, 386
BshFI GGCC 4 cut(s) 85, 226, 470, 1406
BshNI GGYRCC 1 cut(s) 157
BsiSI CCGG 6 cut(s) 155, 167, 443, 471, 614, 752
BslFI GGGAC 2 cut(s) 1325, 1468
BslI CCNNNNNNNGG 4 cut(s) 260, 477, 494, 1215
BsmAI GTCTC 5 cut(s) 11, 164, 178, 291, 444
BsmBI CGTCTC 2 cut(s) 11, 164
BsmFI GGGAC 2 cut(s) 1325, 1468
BsnI GGCC 4 cut(s) 85, 226, 470, 1406
Bso31I GGTCTC 1 cut(s) 444
Bsp1286I GDGCHC 5 cut(s) 167, 254, 332, 354, 501
Bsp19I CCATGG 1 cut(s) 1365
BspACI CCGC 9 cut(s) 65, 233, 261, 294, 346, 384, 386, 557, 1477
BspANI GGCC 4 cut(s) 85, 226, 470, 1406
BspCNI CTCAG 5 cut(s) 136, 301, 439, 1132, 1261
BspFNI CGCG 3 cut(s) 296, 348, 386
BspLI GGNNCC 3 cut(s) 58, 159, 375
BspMAI CTGCAG 2 cut(s) 1266, 1447
BspOI GCTAGC 1 cut(s) 588
BspT107I GGYRCC 1 cut(s) 157
BspTNI GGTCTC 1 cut(s) 444
BsrFI RCCGGY 3 cut(s) 154, 470, 613
BssAI RCCGGY 3 cut(s) 154, 470, 613
BssECI CCNNGG 6 cut(s) 354, 384, 488, 1209, 1290, 1365
BssNI GRCGYC 1 cut(s) 158
BssT1I CCWWGG 2 cut(s) 1209, 1365
Bst2UI CCWGG 1 cut(s) 1292
Bst4CI ACNGT 4 cut(s) 314, 925, 956, 1190
Bst6I CTCTTC 1 cut(s) 887
BstACI GRCGYC 1 cut(s) 158
BstAPI GCANNNNNTGC 1 cut(s) 1261
BstC8I GCNNGC 6 cut(s) 69, 156, 294, 350, 472, 586
BstDEI CTNAG 8 cut(s) 123, 288, 426, 1062, 1140, 1269, 1299, 1430
BstDSI CCRYGG 3 cut(s) 354, 384, 1365
BstEII GGTNACC 1 cut(s) 445
BstF5I GGATG 5 cut(s) 192, 205, 394, 703, 1054
BstFNI CGCG 3 cut(s) 296, 348, 386
BstH2I RGCGCY 2 cut(s) 161, 1429
BstHHI GCGC 3 cut(s) 160, 579, 1428
BstMAI GTCTC 5 cut(s) 11, 164, 178, 291, 444
BstMWI GCNNNNNNNGC 9 cut(s) 77, 232, 258, 585, 619, 628, 1261, 1552, 1561
BstNI CCWGG 1 cut(s) 1292
BstNSI RCATGY 1 cut(s) 1483
BstPI GGTNACC 1 cut(s) 445
BstSCI CCNGG 3 cut(s) 165, 751, 1290
BstSFI CTRYAG 3 cut(s) 1262, 1443, 1520
BstSLI GKGCMC 1 cut(s) 501
BstUI CGCG 3 cut(s) 296, 348, 386
BstV1I GCAGC 9 cut(s) 468, 592, 631, 886, 1186, 1429, 1501, 1597, 1600
BsuRI GGCC 4 cut(s) 85, 226, 470, 1406
BtgI CCRYGG 3 cut(s) 354, 384, 1365
BtgZI GCGATG 1 cut(s) 531
BtsCI GGATG 5 cut(s) 192, 205, 394, 703, 1054
BtsI GCAGTG 1 cut(s) 1636
BtsIMutI CAGTG 1 cut(s) 1636
Cac8I GCNNGC 6 cut(s) 69, 156, 294, 350, 472, 586
CfoI GCGC 3 cut(s) 160, 579, 1428
Cfr10I RCCGGY 3 cut(s) 154, 470, 613
Cfr13I GGNCC 3 cut(s) 57, 373, 468
Cfr42I CCGCGG 1 cut(s) 387
CseI GACGC 1 cut(s) 131
CviAII CATG 9 cut(s) 139, 220, 397, 422, 433, 1072, 1366, 1480, 1643
DdeI CTNAG 8 cut(s) 123, 288, 426, 1062, 1140, 1269, 1299, 1430
DinI GGCGCC 1 cut(s) 159
DraI TTTAAA 1 cut(s) 1398
DraIII CACNNNGTG 1 cut(s) 1252
Eam1104I CTCTTC 1 cut(s) 887
EarI CTCTTC 1 cut(s) 887
Eco130I CCWWGG 2 cut(s) 1209, 1365
Eco147I AGGCCT 2 cut(s) 226, 1406
Eco24I GRGCYC 4 cut(s) 167, 254, 332, 354
Eco31I GGTCTC 1 cut(s) 444
Eco47I GGWCC 2 cut(s) 57, 373
Eco91I GGTNACC 1 cut(s) 445
EcoO109I RGGNCCY 1 cut(s) 57
EcoO65I GGTNACC 1 cut(s) 445
EcoRI GAATTC 1 cut(s) 379
EcoRII CCWGG 1 cut(s) 1290
EcoT14I CCWWGG 2 cut(s) 1209, 1365
EcoT38I GRGCYC 4 cut(s) 167, 254, 332, 354
EgeI GGCGCC 1 cut(s) 159
EheI GGCGCC 1 cut(s) 159
ErhI CCWWGG 2 cut(s) 1209, 1365
Esp3I CGTCTC 2 cut(s) 11, 164
FaeI CATG 9 cut(s) 142, 223, 400, 425, 436, 1075, 1369, 1483, 1646
FalI AAGNNNNNCTT 4 cut(s) 1368, 1400, 1452, 1484
FaqI GGGAC 2 cut(s) 1325, 1468
FatI CATG 9 cut(s) 138, 219, 396, 421, 432, 1071, 1365, 1479, 1642
FauI CCCGC 1 cut(s) 301
FokI GGATG 5 cut(s) 179, 192, 401, 710, 1061
FriOI GRGCYC 4 cut(s) 167, 254, 332, 354
FspBI CTAG 2 cut(s) 585, 1035
GlaI GCGC 3 cut(s) 159, 578, 1427
GsaI CCCAGC 1 cut(s) 1489
HaeII RGCGCY 2 cut(s) 161, 1429
HaeIII GGCC 4 cut(s) 85, 226, 470, 1406
HapII CCGG 6 cut(s) 155, 167, 443, 471, 614, 752
HgaI GACGC 1 cut(s) 131
HhaI GCGC 3 cut(s) 160, 579, 1428
Hin1I GRCGYC 1 cut(s) 158
Hin1II CATG 9 cut(s) 142, 223, 400, 425, 436, 1075, 1369, 1483, 1646
Hin6I GCGC 3 cut(s) 158, 577, 1426
HinP1I GCGC 3 cut(s) 158, 577, 1426
HincII GTYRAC 1 cut(s) 1571
HindII GTYRAC 1 cut(s) 1571
HindIII AAGCTT 1 cut(s) 1133
HinfI GANTC 7 cut(s) 186, 404, 531, 544, 565, 1313, 1646
HpaII CCGG 6 cut(s) 155, 167, 443, 471, 614, 752
HphI GGTGA 8 cut(s) 54, 424, 457, 637, 668, 770, 850, 1023
Hpy166II GTNNAC 4 cut(s) 134, 394, 415, 1571
Hpy188I TCNGA 7 cut(s) 373, 489, 570, 929, 1141, 1156, 1355
Hpy8I GTNNAC 4 cut(s) 134, 394, 415, 1571
Hpy99I CGWCG 2 cut(s) 455, 479
HpyAV CCTTC 7 cut(s) 210, 246, 592, 874, 878, 1454, 1620
HpyCH4III ACNGT 4 cut(s) 314, 925, 956, 1190
HpyCH4IV ACGT 1 cut(s) 1165
HpyF10VI GCNNNNNNNGC 9 cut(s) 77, 232, 258, 585, 619, 628, 1261, 1552, 1561
HpyF3I CTNAG 8 cut(s) 123, 288, 426, 1062, 1140, 1269, 1299, 1430
HpySE526I ACGT 1 cut(s) 1165
Hsp92I GRCGYC 1 cut(s) 158
Hsp92II CATG 9 cut(s) 142, 223, 400, 425, 436, 1075, 1369, 1483, 1646
HspAI GCGC 3 cut(s) 158, 577, 1426
KasI GGCGCC 1 cut(s) 157
KroI GCCGGC 2 cut(s) 154, 470
KroNI GCCGGC 2 cut(s) 156, 472
KspI CCGCGG 1 cut(s) 387
LmnI GCTCC 2 cut(s) 1369, 1518
Lsp1109I GCAGC 9 cut(s) 468, 592, 631, 886, 1186, 1429, 1501, 1597, 1600
LweI GCATC 7 cut(s) 201, 214, 901, 1212, 1381, 1533, 1572
MaeI CTAG 2 cut(s) 585, 1035
MaeII ACGT 1 cut(s) 1165
MaeIII GTNAC 3 cut(s) 445, 1029, 1294
MboII GAAGA 5 cut(s) 354, 808, 889, 904, 1231
MfeI CAATTG 2 cut(s) 146, 1101
MhlI GDGCHC 5 cut(s) 167, 254, 332, 354, 501
Mly113I GGCGCC 1 cut(s) 158
MlyI GAGTC 3 cut(s) 180, 413, 1307
MmeI TCCRAC 3 cut(s) 952, 1378, 1540
MreI CGCCGGCG 1 cut(s) 154
MroNI GCCGGC 2 cut(s) 154, 470
MseI TTAA 3 cut(s) 1386, 1397, 1500
MslI CAYNNNNRTG 1 cut(s) 1043
MspA1I CMGCKG 4 cut(s) 386, 622, 1027, 1199
MspI CCGG 6 cut(s) 155, 167, 443, 471, 614, 752
MspR9I CCNGG 3 cut(s) 167, 753, 1292
MunI CAATTG 2 cut(s) 146, 1101
MvaI CCWGG 1 cut(s) 1292
MvnI CGCG 3 cut(s) 296, 348, 386
MwoI GCNNNNNNNGC 9 cut(s) 77, 232, 258, 585, 619, 628, 1261, 1552, 1561
NaeI GCCGGC 2 cut(s) 156, 472
NarI GGCGCC 1 cut(s) 158
NciI CCSGG 2 cut(s) 167, 753
NcoI CCATGG 1 cut(s) 1365
NgoMIV GCCGGC 2 cut(s) 154, 470
NheI GCTAGC 1 cut(s) 584
NlaIII CATG 9 cut(s) 142, 223, 400, 425, 436, 1075, 1369, 1483, 1646
NlaIV GGNNCC 3 cut(s) 58, 159, 375
NmeAIII GCCGAG 4 cut(s) 168, 186, 515, 1037
NmuCI GTSAC 3 cut(s) 445, 1029, 1294
NspI RCATGY 1 cut(s) 1483
OliI CACNNNNGTG 1 cut(s) 1043
PceI AGGCCT 2 cut(s) 226, 1406
PcsI WCGNNNNNNNCGW 1 cut(s) 158
PdiI GCCGGC 2 cut(s) 156, 472
PfeI GAWTC 4 cut(s) 531, 544, 565, 1646
PleI GAGTC 3 cut(s) 180, 412, 1307
PluTI GGCGCC 1 cut(s) 161
PpsI GAGTC 3 cut(s) 180, 412, 1307
PpuMI RGGWCCY 1 cut(s) 57
PshBI ATTAAT 1 cut(s) 1500
Psp5II RGGWCCY 1 cut(s) 57
Psp6I CCWGG 1 cut(s) 1290
PspEI GGTNACC 1 cut(s) 445
PspFI CCCAGC 1 cut(s) 1485
PspGI CCWGG 1 cut(s) 1290
PspN4I GGNNCC 3 cut(s) 58, 159, 375
PspPI GGNCC 3 cut(s) 57, 373, 468
PspPPI RGGWCCY 1 cut(s) 57
PstI CTGCAG 2 cut(s) 1266, 1447
PvuII CAGCTG 3 cut(s) 622, 1027, 1199
RseI CAYNNNNRTG 1 cut(s) 1043
SacII CCGCGG 1 cut(s) 387
SaqAI TTAA 3 cut(s) 1386, 1397, 1500
Sau96I GGNCC 3 cut(s) 57, 373, 468
SchI GAGTC 3 cut(s) 180, 413, 1307
ScrFI CCNGG 3 cut(s) 167, 753, 1292
SduI GDGCHC 5 cut(s) 167, 254, 332, 354, 501
SfaNI GCATC 7 cut(s) 201, 214, 901, 1212, 1381, 1533, 1572
SfcI CTRYAG 3 cut(s) 1262, 1443, 1520
SfoI GGCGCC 1 cut(s) 159
Sfr303I CCGCGG 1 cut(s) 387
SgrAI CRCCGGYG 1 cut(s) 154
SgrBI CCGCGG 1 cut(s) 387
SinI GGWCC 2 cut(s) 57, 373
SmiMI CAYNNNNRTG 1 cut(s) 1043
SseBI AGGCCT 2 cut(s) 226, 1406
SsiI CCGC 9 cut(s) 65, 233, 261, 294, 346, 384, 386, 557, 1477
SspDI GGCGCC 1 cut(s) 157
SspI AATATT 1 cut(s) 733
SspMI CTAG 2 cut(s) 585, 1035
StuI AGGCCT 2 cut(s) 226, 1406
StyD4I CCNGG 3 cut(s) 165, 751, 1290
StyI CCWWGG 2 cut(s) 1209, 1365
TaaI ACNGT 4 cut(s) 314, 925, 956, 1190
TaiI ACGT 1 cut(s) 1168
TaqI TCGA 5 cut(s) 638, 794, 854, 869, 978
TaqII GACCGA 1 cut(s) 464
TauI GCSGC 1 cut(s) 559
TfiI GAWTC 4 cut(s) 531, 544, 565, 1646
Tru1I TTAA 3 cut(s) 1386, 1397, 1500
Tru9I TTAA 3 cut(s) 1386, 1397, 1500
TscAI CASTG 1 cut(s) 1636
TseFI GTSAC 3 cut(s) 445, 1029, 1294
TseI GCWGC 9 cut(s) 481, 605, 619, 899, 1199, 1442, 1489, 1585, 1588
Tsp45I GTSAC 3 cut(s) 445, 1029, 1294
TspDTI ATGAA 5 cut(s) 734, 758, 999, 1007, 1659
TspGWI ACGGA 1 cut(s) 450
TspRI CASTG 1 cut(s) 1636
VpaK11BI GGWCC 2 cut(s) 57, 373
VspI ATTAAT 1 cut(s) 1500
XapI RAATTY 5 cut(s) 379, 721, 973, 1349, 1434
XceI RCATGY 1 cut(s) 1483
XcmI CCANNNNNNNNNTGG 1 cut(s) 1622
XspI CTAG 2 cut(s) 585, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.