transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21230 AT2G21230 AT2G21230 AT2G21230 AT4G38900 AT4G38900 AT4G38900 |
| fragaria_vesca | FvH4_2g10670 FvH4_2g10670 FvH4_2g10670 FvH4_2g10670 FvH4_2g10670 FvH4_2g38831 FvH4_2g38831 |
| malus_domestica | MD05G1054500.v1.1 MD08G1016000.v1.1 MD08G1016200.v1.1 MD15G1015000.v1.1 MD15G1015100.v1.1 |
| prunus_persica | Prupe.1G369300_v2.0.a1 Prupe.1G369300_v2.0.a1 |
| pyrus_communis | pycom08g01400 pycom08g01410 pycom15g01300 |
| rosa_chinensis | RchiOBHm_Chr6g0268361 RchiOBHm_Chr6g0302431 |
| rosa_laevigata | RLG00000011172 RLG00000013914 |
| rosa_multiflora | Rmu_co8451713.1_g000001 Rmu_sc0011714.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00165790 Rroxscaffold_7G00199840 |
| rosa_rugosa | Rorug06G0040800 Rorug06G0314000 Rorug06G0314100 Rorug06G0314200 Rorug06G0314200 |
| rosa_samantha | Rh6AG160900 Rh6AG427100 Rh6BG165300 Rh6BG475600 Rh6CG153200 Rh6CG439300 Rh6DG151000 Rh6DG426300 |
| rosa_wichuraiana | Rw6G013910 Rw6G036950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 531 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 59 |
| AccBSI | CCGCTC | 1 cut(s) | 1075 |
| AccII | CGCG | 2 cut(s) | 262, 381 |
| AclWI | GGATC | 5 cut(s) | 190, 203, 598, 643, 703 |
| AcoI | YGGCCR | 1 cut(s) | 1078 |
| AcsI | RAATTY | 5 cut(s) | 286, 412, 655, 1042, 1406 |
| AdeI | CACNNNGTG | 1 cut(s) | 1309 |
| AfaI | GTAC | 1 cut(s) | 990 |
| AfeI | AGCGCT | 1 cut(s) | 1206 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 59, 312, 527, 615, 1272 |
| AgsI | TTSAA | 9 cut(s) | 118, 587, 1017, 1153, 1292, 1405, 1418, 1533, 1577 |
| AjnI | CCWGG | 2 cut(s) | 295, 925 |
| AluBI | AGCT | 9 cut(s) | 274, 578, 682, 1165, 1256, 1421, 1492, 1507, 1628 |
| AluI | AGCT | 9 cut(s) | 274, 578, 682, 1165, 1256, 1421, 1492, 1507, 1628 |
| Alw21I | GWGCWC | 1 cut(s) | 1509 |
| Alw26I | GTCTC | 6 cut(s) | 143, 327, 431, 501, 682, 1362 |
| AlwI | GGATC | 5 cut(s) | 190, 203, 598, 643, 703 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 932 |
| Ama87I | CYCGRG | 2 cut(s) | 191, 388 |
| Aor51HI | AGCGCT | 1 cut(s) | 1206 |
| AoxI | GGCC | 8 cut(s) | 44, 188, 251, 501, 511, 923, 1078, 1522 |
| ApoI | RAATTY | 5 cut(s) | 286, 412, 655, 1042, 1406 |
| AspLEI | GCGC | 3 cut(s) | 540, 1207, 1546 |
| AspS9I | GGNCC | 4 cut(s) | 189, 392, 458, 501 |
| AsuC2I | CCSGG | 3 cut(s) | 192, 193, 476 |
| AsuHPI | GGTGA | 3 cut(s) | 1080, 1157, 1682 |
| AsuII | TTCGAA | 1 cut(s) | 239 |
| AvaI | CYCGRG | 2 cut(s) | 191, 388 |
| AvaII | GGWCC | 2 cut(s) | 392, 458 |
| BaeGI | GKGCMC | 1 cut(s) | 534 |
| BamHI | GGATCC | 1 cut(s) | 195 |
| BanI | GGYRCC | 1 cut(s) | 531 |
| BanII | GRGCYC | 3 cut(s) | 296, 368, 1509 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1268, 1300 |
| BbsI | GAAGAC | 1 cut(s) | 857 |
| Bbv12I | GWGCWC | 1 cut(s) | 1509 |
| BbvCI | CCTCAGC | 1 cut(s) | 711 |
| BccI | CCATC | 3 cut(s) | 127, 626, 1100 |
| BceAI | ACGGC | 3 cut(s) | 526, 928, 1714 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1175, 1209 |
| BciT130I | CCWGG | 2 cut(s) | 297, 927 |
| BcnI | CCSGG | 3 cut(s) | 192, 193, 476 |
| BcoDI | GTCTC | 6 cut(s) | 143, 327, 431, 501, 682, 1362 |
| BfaI | CTAG | 1 cut(s) | 975 |
| BfmI | CTRYAG | 2 cut(s) | 1003, 1580 |
| BfoI | RGCGCY | 2 cut(s) | 541, 1208 |
| Bme1390I | CCNGG | 5 cut(s) | 192, 193, 297, 476, 927 |
| Bme18I | GGWCC | 2 cut(s) | 392, 458 |
| BmeT110I | CYCGRG | 2 cut(s) | 191, 388 |
| BmgT120I | GGNCC | 4 cut(s) | 189, 392, 458, 501 |
| BmiI | GGNNCC | 4 cut(s) | 81, 197, 393, 533 |
| BmrFI | CCNGG | 5 cut(s) | 192, 193, 297, 476, 927 |
| BmrI | ACTGGG | 2 cut(s) | 105, 1342 |
| BmsI | GCATC | 6 cut(s) | 219, 475, 1269, 1438, 1594, 1696 |
| BmuI | ACTGGG | 2 cut(s) | 105, 1342 |
| BpiI | GAAGAC | 1 cut(s) | 857 |
| BpmI | CTGGAG | 2 cut(s) | 1491, 1521 |
| Bpu10I | CCTNAGC | 2 cut(s) | 84, 711 |
| Bpu14I | TTCGAA | 1 cut(s) | 239 |
| BpuEI | CTTGAG | 1 cut(s) | 947 |
| BpuMI | CCSGG | 3 cut(s) | 192, 193, 476 |
| BsaI | GGTCTC | 1 cut(s) | 143 |
| BsaJI | CCNNGG | 6 cut(s) | 191, 295, 296, 387, 474, 1266 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 732, 762 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 59, 312, 527, 615, 1272 |
| Bse118I | RCCGGY | 1 cut(s) | 534 |
| Bse1I | ACTGG | 5 cut(s) | 111, 840, 1348, 1474, 1729 |
| Bse3DI | GCAATG | 1 cut(s) | 350 |
| BseBI | CCWGG | 2 cut(s) | 297, 927 |
| BseDI | CCNNGG | 6 cut(s) | 191, 295, 296, 387, 474, 1266 |
| BseGI | GGATG | 3 cut(s) | 302, 637, 757 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 59, 312, 527, 615, 1272 |
| BseMI | GCAATG | 1 cut(s) | 350 |
| BseMII | CTCAG | 9 cut(s) | 143, 165, 338, 588, 702, 1128, 1157, 1188, 1710 |
| BseNI | ACTGG | 5 cut(s) | 111, 840, 1348, 1474, 1729 |
| BseRI | GAGGAG | 3 cut(s) | 449, 964, 1530 |
| BseSI | GKGCMC | 1 cut(s) | 534 |
| BseYI | CCCAGC | 1 cut(s) | 274 |
| Bsh1236I | CGCG | 2 cut(s) | 262, 381 |
| BshFI | GGCC | 8 cut(s) | 46, 190, 253, 503, 513, 925, 1080, 1524 |
| BshNI | GGYRCC | 1 cut(s) | 531 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1509 |
| BsiHKCI | CYCGRG | 2 cut(s) | 191, 388 |
| BsiSI | CCGG | 4 cut(s) | 192, 476, 504, 535 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 59, 312, 527, 615, 1272 |
| BsmAI | GTCTC | 6 cut(s) | 143, 327, 431, 501, 682, 1362 |
| BsmBI | CGTCTC | 1 cut(s) | 501 |
| BsmI | GAATGC | 1 cut(s) | 712 |
| BsnI | GGCC | 8 cut(s) | 46, 190, 253, 503, 513, 925, 1080, 1524 |
| Bso31I | GGTCTC | 1 cut(s) | 143 |
| BsoBI | CYCGRG | 2 cut(s) | 191, 388 |
| Bsp119I | TTCGAA | 1 cut(s) | 239 |
| Bsp1286I | GDGCHC | 4 cut(s) | 296, 368, 534, 1509 |
| Bsp143I | GATC | 4 cut(s) | 195, 603, 635, 695 |
| BspANI | GGCC | 8 cut(s) | 46, 190, 253, 503, 513, 925, 1080, 1524 |
| BspCNI | CTCAG | 9 cut(s) | 142, 166, 337, 587, 703, 1127, 1158, 1189, 1711 |
| BspFNI | CGCG | 2 cut(s) | 262, 381 |
| BspHI | TCATGA | 1 cut(s) | 246 |
| BspLI | GGNNCC | 4 cut(s) | 81, 197, 393, 533 |
| BspMAI | CTGCAG | 1 cut(s) | 1584 |
| BspPI | GGATC | 5 cut(s) | 190, 203, 598, 643, 703 |
| BspT104I | TTCGAA | 1 cut(s) | 239 |
| BspT107I | GGYRCC | 1 cut(s) | 531 |
| BspTNI | GGTCTC | 1 cut(s) | 143 |
| BsrBI | CCGCTC | 1 cut(s) | 1075 |
| BsrDI | GCAATG | 1 cut(s) | 350 |
| BsrFI | RCCGGY | 1 cut(s) | 534 |
| BsrI | ACTGG | 5 cut(s) | 111, 840, 1348, 1474, 1729 |
| BssAI | RCCGGY | 1 cut(s) | 534 |
| BssECI | CCNNGG | 6 cut(s) | 191, 295, 296, 387, 474, 1266 |
| BssMI | GATC | 4 cut(s) | 195, 603, 635, 695 |
| BssT1I | CCWWGG | 1 cut(s) | 1266 |
| Bst2UI | CCWGG | 2 cut(s) | 297, 927 |
| Bst4CI | ACNGT | 6 cut(s) | 182, 442, 548, 554, 1004, 1251 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1318, 1657 |
| BstBI | TTCGAA | 1 cut(s) | 239 |
| BstC8I | GCNNGC | 2 cut(s) | 917, 1494 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 525 |
| BstF5I | GGATG | 3 cut(s) | 302, 637, 757 |
| BstFNI | CGCG | 2 cut(s) | 262, 381 |
| BstH2I | RGCGCY | 2 cut(s) | 541, 1208 |
| BstHHI | GCGC | 3 cut(s) | 540, 1207, 1546 |
| BstKTI | GATC | 4 cut(s) | 198, 606, 638, 698 |
| BstMAI | GTCTC | 6 cut(s) | 143, 327, 431, 501, 682, 1362 |
| BstMBI | GATC | 4 cut(s) | 195, 603, 635, 695 |
| BstNI | CCWGG | 2 cut(s) | 297, 927 |
| BstSCI | CCNGG | 5 cut(s) | 190, 191, 295, 474, 925 |
| BstSFI | CTRYAG | 2 cut(s) | 1003, 1580 |
| BstSLI | GKGCMC | 1 cut(s) | 534 |
| BstUI | CGCG | 2 cut(s) | 262, 381 |
| BstV2I | GAAGAC | 1 cut(s) | 857 |
| BstX2I | RGATCY | 2 cut(s) | 195, 695 |
| BstYI | RGATCY | 2 cut(s) | 195, 695 |
| BsuRI | GGCC | 8 cut(s) | 46, 190, 253, 503, 513, 925, 1080, 1524 |
| BtgZI | GCGATG | 1 cut(s) | 996 |
| BtsCI | GGATG | 3 cut(s) | 302, 637, 757 |
| BtsI | GCAGTG | 1 cut(s) | 496 |
| BtsIMutI | CAGTG | 5 cut(s) | 496, 559, 847, 1000, 1058 |
| Cac8I | GCNNGC | 2 cut(s) | 917, 1494 |
| CaiI | CAGNNNCTG | 1 cut(s) | 932 |
| CciI | TCATGA | 1 cut(s) | 246 |
| CfoI | GCGC | 3 cut(s) | 540, 1207, 1546 |
| Cfr10I | RCCGGY | 1 cut(s) | 534 |
| Cfr13I | GGNCC | 4 cut(s) | 189, 392, 458, 501 |
| Cfr9I | CCCGGG | 1 cut(s) | 191 |
| Csp6I | GTAC | 1 cut(s) | 989 |
| CviAII | CATG | 7 cut(s) | 145, 247, 430, 455, 772, 1540, 1657 |
| CviQI | GTAC | 1 cut(s) | 989 |
| DpnI | GATC | 4 cut(s) | 197, 605, 637, 697 |
| DpnII | GATC | 4 cut(s) | 195, 603, 635, 695 |
| DraI | TTTAAA | 1 cut(s) | 1455 |
| DraIII | CACNNNGTG | 1 cut(s) | 1309 |
| EaeI | YGGCCR | 1 cut(s) | 1078 |
| Ecl136II | GAGCTC | 1 cut(s) | 1507 |
| Eco130I | CCWWGG | 1 cut(s) | 1266 |
| Eco147I | AGGCCT | 1 cut(s) | 253 |
| Eco24I | GRGCYC | 3 cut(s) | 296, 368, 1509 |
| Eco31I | GGTCTC | 1 cut(s) | 143 |
| Eco47I | GGWCC | 2 cut(s) | 392, 458 |
| Eco47III | AGCGCT | 1 cut(s) | 1206 |
| Eco53kI | GAGCTC | 1 cut(s) | 1507 |
| Eco88I | CYCGRG | 2 cut(s) | 191, 388 |
| EcoICRI | GAGCTC | 1 cut(s) | 1507 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 525 |
| EcoO109I | RGGNCCY | 1 cut(s) | 392 |
| EcoRII | CCWGG | 2 cut(s) | 295, 925 |
| EcoT14I | CCWWGG | 1 cut(s) | 1266 |
| EcoT22I | ATGCAT | 1 cut(s) | 769 |
| EcoT38I | GRGCYC | 3 cut(s) | 296, 368, 1509 |
| ErhI | CCWWGG | 1 cut(s) | 1266 |
| Esp3I | CGTCTC | 1 cut(s) | 501 |
| FaeI | CATG | 7 cut(s) | 148, 250, 433, 458, 775, 1543, 1660 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1425, 1457, 1512, 1544 |
| FatI | CATG | 7 cut(s) | 144, 246, 429, 454, 771, 1539, 1656 |
| FokI | GGATG | 3 cut(s) | 289, 644, 764 |
| FriOI | GRGCYC | 3 cut(s) | 296, 368, 1509 |
| FspBI | CTAG | 1 cut(s) | 975 |
| GlaI | GCGC | 3 cut(s) | 539, 1206, 1545 |
| GsaI | CCCAGC | 1 cut(s) | 278 |
| GsuI | CTGGAG | 2 cut(s) | 1491, 1521 |
| HaeII | RGCGCY | 2 cut(s) | 541, 1208 |
| HaeIII | GGCC | 8 cut(s) | 46, 190, 253, 503, 513, 925, 1080, 1524 |
| HapII | CCGG | 4 cut(s) | 192, 476, 504, 535 |
| HhaI | GCGC | 3 cut(s) | 540, 1207, 1546 |
| Hin1II | CATG | 7 cut(s) | 148, 250, 433, 458, 775, 1543, 1660 |
| Hin6I | GCGC | 3 cut(s) | 538, 1205, 1544 |
| HinP1I | GCGC | 3 cut(s) | 538, 1205, 1544 |
| HindIII | AAGCTT | 2 cut(s) | 1419, 1490 |
| HinfI | GANTC | 5 cut(s) | 169, 347, 570, 960, 1370 |
| HpaII | CCGG | 4 cut(s) | 192, 476, 504, 535 |
| HphI | GGTGA | 3 cut(s) | 1080, 1157, 1682 |
| Hpy166II | GTNNAC | 1 cut(s) | 1353 |
| Hpy188I | TCNGA | 6 cut(s) | 132, 934, 942, 998, 1041, 1213 |
| Hpy188III | TCNNGA | 4 cut(s) | 173, 247, 964, 1292 |
| Hpy8I | GTNNAC | 1 cut(s) | 1353 |
| Hpy99I | CGWCG | 2 cut(s) | 70, 808 |
| HpyAV | CCTTC | 8 cut(s) | 132, 213, 405, 471, 524, 950, 1514, 1692 |
| HpyCH4III | ACNGT | 6 cut(s) | 182, 442, 548, 554, 1004, 1251 |
| HpyCH4IV | ACGT | 1 cut(s) | 1222 |
| HpySE526I | ACGT | 1 cut(s) | 1222 |
| Hsp92II | CATG | 7 cut(s) | 148, 250, 433, 458, 775, 1543, 1660 |
| HspAI | GCGC | 3 cut(s) | 538, 1205, 1544 |
| Kzo9I | GATC | 4 cut(s) | 195, 603, 635, 695 |
| LmnI | GCTCC | 3 cut(s) | 405, 1008, 1633 |
| LweI | GCATC | 6 cut(s) | 219, 475, 1269, 1438, 1594, 1696 |
| MaeI | CTAG | 1 cut(s) | 975 |
| MaeII | ACGT | 1 cut(s) | 1222 |
| MaeIII | GTNAC | 3 cut(s) | 548, 809, 908 |
| MalI | GATC | 4 cut(s) | 197, 605, 637, 697 |
| MbiI | CCGCTC | 1 cut(s) | 1075 |
| MboI | GATC | 4 cut(s) | 195, 603, 635, 695 |
| MboII | GAAGA | 5 cut(s) | 117, 147, 582, 862, 1288 |
| MfeI | CAATTG | 2 cut(s) | 599, 1158 |
| MflI | RGATCY | 2 cut(s) | 195, 695 |
| MhlI | GDGCHC | 4 cut(s) | 296, 368, 534, 1509 |
| MlyI | GAGTC | 3 cut(s) | 178, 954, 1364 |
| MmeI | TCCRAC | 2 cut(s) | 77, 1021 |
| Mph1103I | ATGCAT | 1 cut(s) | 769 |
| MseI | TTAA | 4 cut(s) | 762, 1443, 1454, 1560 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1016 |
| MspA1I | CMGCKG | 6 cut(s) | 43, 274, 578, 682, 1256, 1499 |
| MspI | CCGG | 4 cut(s) | 192, 476, 504, 535 |
| MspR9I | CCNGG | 5 cut(s) | 192, 193, 297, 476, 927 |
| MunI | CAATTG | 2 cut(s) | 599, 1158 |
| Mva1269I | GAATGC | 1 cut(s) | 712 |
| MvaI | CCWGG | 2 cut(s) | 297, 927 |
| MvnI | CGCG | 2 cut(s) | 262, 381 |
| NciI | CCSGG | 3 cut(s) | 192, 193, 476 |
| NdeII | GATC | 4 cut(s) | 195, 603, 635, 695 |
| NlaIII | CATG | 7 cut(s) | 148, 250, 433, 458, 775, 1543, 1660 |
| NlaIV | GGNNCC | 4 cut(s) | 81, 197, 393, 533 |
| NmeAIII | GCCGAG | 1 cut(s) | 1056 |
| NsiI | ATGCAT | 1 cut(s) | 769 |
| NspV | TTCGAA | 1 cut(s) | 239 |
| PagI | TCATGA | 1 cut(s) | 246 |
| PasI | CCCWGGG | 1 cut(s) | 296 |
| PceI | AGGCCT | 1 cut(s) | 253 |
| PctI | GAATGC | 1 cut(s) | 712 |
| PfeI | GAWTC | 2 cut(s) | 347, 570 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 59 |
| PleI | GAGTC | 3 cut(s) | 177, 954, 1364 |
| PpsI | GAGTC | 3 cut(s) | 177, 954, 1364 |
| PpuMI | RGGWCCY | 1 cut(s) | 392 |
| Psp124BI | GAGCTC | 1 cut(s) | 1509 |
| Psp5II | RGGWCCY | 1 cut(s) | 392 |
| Psp6I | CCWGG | 2 cut(s) | 295, 925 |
| PspFI | CCCAGC | 1 cut(s) | 274 |
| PspGI | CCWGG | 2 cut(s) | 295, 925 |
| PspN4I | GGNNCC | 4 cut(s) | 81, 197, 393, 533 |
| PspPI | GGNCC | 4 cut(s) | 189, 392, 458, 501 |
| PspPPI | RGGWCCY | 1 cut(s) | 392 |
| PstI | CTGCAG | 1 cut(s) | 1584 |
| PstNI | CAGNNNCTG | 1 cut(s) | 932 |
| PsuI | RGATCY | 2 cut(s) | 195, 695 |
| PvuII | CAGCTG | 4 cut(s) | 274, 578, 682, 1256 |
| RsaI | GTAC | 1 cut(s) | 990 |
| RsaNI | GTAC | 1 cut(s) | 989 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SacI | GAGCTC | 1 cut(s) | 1509 |
| SaqAI | TTAA | 4 cut(s) | 762, 1443, 1454, 1560 |
| Sau3AI | GATC | 4 cut(s) | 195, 603, 635, 695 |
| Sau96I | GGNCC | 4 cut(s) | 189, 392, 458, 501 |
| SchI | GAGTC | 3 cut(s) | 178, 954, 1364 |
| ScrFI | CCNGG | 5 cut(s) | 192, 193, 297, 476, 927 |
| SduI | GDGCHC | 4 cut(s) | 296, 368, 534, 1509 |
| SfaNI | GCATC | 6 cut(s) | 219, 475, 1269, 1438, 1594, 1696 |
| SfcI | CTRYAG | 2 cut(s) | 1003, 1580 |
| SfuI | TTCGAA | 1 cut(s) | 239 |
| SgrAI | CRCCGGYG | 1 cut(s) | 534 |
| SinI | GGWCC | 2 cut(s) | 392, 458 |
| SmaI | CCCGGG | 1 cut(s) | 193 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SmlI | CTYRAG | 1 cut(s) | 962 |
| SmoI | CTYRAG | 1 cut(s) | 962 |
| SseBI | AGGCCT | 1 cut(s) | 253 |
| SspMI | CTAG | 1 cut(s) | 975 |
| SstI | GAGCTC | 1 cut(s) | 1509 |
| StuI | AGGCCT | 1 cut(s) | 253 |
| StyD4I | CCNGG | 5 cut(s) | 190, 191, 295, 474, 925 |
| StyI | CCWWGG | 1 cut(s) | 1266 |
| TaaI | ACNGT | 6 cut(s) | 182, 442, 548, 554, 1004, 1251 |
| TaiI | ACGT | 1 cut(s) | 1225 |
| TaqI | TCGA | 5 cut(s) | 227, 239, 848, 1047, 1678 |
| TaqII | GACCGA | 1 cut(s) | 303 |
| TauI | GCSGC | 6 cut(s) | 46, 151, 619, 1075, 1499, 1712 |
| TfiI | GAWTC | 2 cut(s) | 347, 570 |
| Tru1I | TTAA | 4 cut(s) | 762, 1443, 1454, 1560 |
| Tru9I | TTAA | 4 cut(s) | 762, 1443, 1454, 1560 |
| TscAI | CASTG | 5 cut(s) | 496, 559, 847, 1007, 1065 |
| TspDTI | ATGAA | 7 cut(s) | 30, 339, 788, 812, 894, 1068, 1645 |
| TspGWI | ACGGA | 3 cut(s) | 321, 1145, 1340 |
| TspMI | CCCGGG | 1 cut(s) | 191 |
| TspRI | CASTG | 5 cut(s) | 496, 559, 847, 1007, 1065 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 59 |
| VpaK11BI | GGWCC | 2 cut(s) | 392, 458 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 525 |
| XapI | RAATTY | 5 cut(s) | 286, 412, 655, 1042, 1406 |
| XmaI | CCCGGG | 1 cut(s) | 191 |
| XspI | CTAG | 1 cut(s) | 975 |
| Zsp2I | ATGCAT | 1 cut(s) | 769 |