Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26110 |
| fragaria_vesca | FvH4_2g31830 |
| malus_domestica | MD08G1062500.v1.1 MD15G1059100.v1.1 |
| prunus_persica | Prupe.1G411600_v2.0.a1 |
| pyrus_communis | pycom08g05150 pycom08g05170 pycom15g05550 |
| rosa_chinensis | RchiOBHm_Chr6g0310991 |
| rosa_laevigata | RLG00000010444 |
| rosa_multiflora | Rmu_co8298593.1_g000001 Rmu_co8387599.1_g000001 Rmu_sc0005220.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00158120 |
| rosa_rugosa | Rorug06G0384700 |
| rosa_samantha | Rh5BG107200 Rh6AG498500 Rh6BG508900 Rh6CG514800 Rh6DG501400 |
| rosa_wichuraiana | Rw0G006860 Rw1G019270 Rw6G043400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 459 |
| Acc65I | GGTACC | 1 cut(s) | 188 |
| AccB1I | GGYRCC | 1 cut(s) | 188 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 656 |
| AclWI | GGATC | 1 cut(s) | 241 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AfaI | GTAC | 4 cut(s) | 123, 190, 540, 706 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 656 |
| AgsI | TTSAA | 7 cut(s) | 342, 387, 451, 590, 731, 853, 865 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 701, 733 |
| AluBI | AGCT | 7 cut(s) | 204, 383, 497, 653, 676, 806, 830 |
| AluI | AGCT | 7 cut(s) | 204, 383, 497, 653, 676, 806, 830 |
| Alw26I | GTCTC | 3 cut(s) | 281, 324, 515 |
| AlwI | GGATC | 1 cut(s) | 241 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 656 |
| Ama87I | CYCGRG | 1 cut(s) | 326 |
| ApeKI | GCWGC | 1 cut(s) | 653 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 880 |
| Asp718I | GGTACC | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 5 cut(s) | 365, 492, 523, 784, 919 |
| AvaI | CYCGRG | 1 cut(s) | 326 |
| BanI | GGYRCC | 1 cut(s) | 188 |
| BbsI | GAAGAC | 2 cut(s) | 160, 357 |
| BbvI | GCAGC | 1 cut(s) | 640 |
| BccI | CCATC | 4 cut(s) | 49, 200, 893, 898 |
| BceAI | ACGGC | 2 cut(s) | 144, 744 |
| BcoDI | GTCTC | 3 cut(s) | 281, 324, 515 |
| BfaI | CTAG | 3 cut(s) | 414, 627, 702 |
| BglII | AGATCT | 1 cut(s) | 416 |
| BisI | GCNGC | 1 cut(s) | 654 |
| BlsI | GCNGC | 1 cut(s) | 655 |
| BmeT110I | CYCGRG | 1 cut(s) | 326 |
| BmiI | GGNNCC | 1 cut(s) | 190 |
| BmsI | GCATC | 2 cut(s) | 811, 865 |
| BpiI | GAAGAC | 2 cut(s) | 160, 357 |
| BpmI | CTGGAG | 1 cut(s) | 294 |
| BpuEI | CTTGAG | 1 cut(s) | 456 |
| Bsa29I | ATCGAT | 1 cut(s) | 847 |
| BsaJI | CCNNGG | 1 cut(s) | 747 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 697, 727 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 656 |
| BseCI | ATCGAT | 1 cut(s) | 847 |
| BseDI | CCNNGG | 1 cut(s) | 747 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 656 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseXI | GCAGC | 1 cut(s) | 640 |
| BshNI | GGYRCC | 1 cut(s) | 188 |
| BshVI | ATCGAT | 1 cut(s) | 847 |
| BsiHKCI | CYCGRG | 1 cut(s) | 326 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 656 |
| BsmAI | GTCTC | 3 cut(s) | 281, 324, 515 |
| BsmBI | CGTCTC | 1 cut(s) | 281 |
| BsoBI | CYCGRG | 1 cut(s) | 326 |
| Bsp143I | GATC | 2 cut(s) | 246, 416 |
| BspCNI | CTCAG | 1 cut(s) | 256 |
| BspDI | ATCGAT | 1 cut(s) | 847 |
| BspLI | GGNNCC | 1 cut(s) | 190 |
| BspPI | GGATC | 1 cut(s) | 241 |
| BspT107I | GGYRCC | 1 cut(s) | 188 |
| BssECI | CCNNGG | 1 cut(s) | 747 |
| BssMI | GATC | 2 cut(s) | 246, 416 |
| Bst4CI | ACNGT | 5 cut(s) | 157, 507, 517, 772, 796 |
| Bst6I | CTCTTC | 5 cut(s) | 58, 167, 220, 301, 585 |
| BstC8I | GCNNGC | 1 cut(s) | 757 |
| BstDEI | CTNAG | 2 cut(s) | 243, 891 |
| BstDSI | CCRYGG | 1 cut(s) | 747 |
| BstEII | GGTNACC | 1 cut(s) | 511 |
| BstKTI | GATC | 2 cut(s) | 249, 419 |
| BstMAI | GTCTC | 3 cut(s) | 281, 324, 515 |
| BstMBI | GATC | 2 cut(s) | 246, 416 |
| BstPI | GGTNACC | 1 cut(s) | 511 |
| BstV1I | GCAGC | 1 cut(s) | 640 |
| BstV2I | GAAGAC | 2 cut(s) | 160, 357 |
| BstX2I | RGATCY | 2 cut(s) | 246, 416 |
| BstYI | RGATCY | 2 cut(s) | 246, 416 |
| Bsu15I | ATCGAT | 1 cut(s) | 847 |
| BsuTUI | ATCGAT | 1 cut(s) | 847 |
| BtgI | CCRYGG | 1 cut(s) | 747 |
| BtgZI | GCGATG | 2 cut(s) | 146, 178 |
| BtsIMutI | CAGTG | 1 cut(s) | 642 |
| Cac8I | GCNNGC | 1 cut(s) | 757 |
| CaiI | CAGNNNCTG | 1 cut(s) | 656 |
| ClaI | ATCGAT | 1 cut(s) | 847 |
| Csp6I | GTAC | 4 cut(s) | 122, 189, 539, 705 |
| CviAII | CATG | 2 cut(s) | 265, 620 |
| CviJI | RGCY | 8 cut(s) | 204, 383, 497, 653, 676, 755, 806, 830 |
| CviKI_1 | RGCY | 8 cut(s) | 204, 383, 497, 653, 676, 755, 806, 830 |
| CviQI | GTAC | 4 cut(s) | 122, 189, 539, 705 |
| DdeI | CTNAG | 2 cut(s) | 243, 891 |
| DpnI | GATC | 2 cut(s) | 248, 418 |
| DpnII | GATC | 2 cut(s) | 246, 416 |
| Eam1104I | CTCTTC | 5 cut(s) | 58, 167, 220, 301, 585 |
| EarI | CTCTTC | 5 cut(s) | 58, 167, 220, 301, 585 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| Eco88I | CYCGRG | 1 cut(s) | 326 |
| Eco91I | GGTNACC | 1 cut(s) | 511 |
| EcoO65I | GGTNACC | 1 cut(s) | 511 |
| Esp3I | CGTCTC | 1 cut(s) | 281 |
| FaeI | CATG | 2 cut(s) | 268, 623 |
| FatI | CATG | 2 cut(s) | 264, 619 |
| Fnu4HI | GCNGC | 1 cut(s) | 654 |
| Fsp4HI | GCNGC | 1 cut(s) | 654 |
| FspBI | CTAG | 3 cut(s) | 414, 627, 702 |
| GluI | GCNGC | 1 cut(s) | 654 |
| GsuI | CTGGAG | 1 cut(s) | 294 |
| Hin1II | CATG | 2 cut(s) | 268, 623 |
| HindIII | AAGCTT | 2 cut(s) | 495, 674 |
| HinfI | GANTC | 7 cut(s) | 116, 268, 397, 438, 583, 849, 881 |
| HphI | GGTGA | 5 cut(s) | 365, 492, 523, 784, 919 |
| Hpy166II | GTNNAC | 2 cut(s) | 147, 605 |
| Hpy188I | TCNGA | 7 cut(s) | 22, 70, 115, 153, 246, 640, 672 |
| Hpy188III | TCNNGA | 6 cut(s) | 311, 326, 414, 473, 587, 731 |
| Hpy8I | GTNNAC | 2 cut(s) | 147, 605 |
| Hpy99I | CGWCG | 3 cut(s) | 511, 772, 796 |
| HpyAV | CCTTC | 4 cut(s) | 57, 270, 348, 432 |
| HpyCH4III | ACNGT | 5 cut(s) | 157, 507, 517, 772, 796 |
| HpyCH4V | TGCA | 1 cut(s) | 824 |
| HpyF3I | CTNAG | 2 cut(s) | 243, 891 |
| Hsp92II | CATG | 2 cut(s) | 268, 623 |
| KpnI | GGTACC | 1 cut(s) | 192 |
| Kzo9I | GATC | 2 cut(s) | 246, 416 |
| LpnPI | CCDG | 6 cut(s) | 324, 360, 393, 642, 663, 777 |
| Lsp1109I | GCAGC | 1 cut(s) | 640 |
| LweI | GCATC | 2 cut(s) | 811, 865 |
| MaeI | CTAG | 3 cut(s) | 414, 627, 702 |
| MaeIII | GTNAC | 3 cut(s) | 511, 787, 867 |
| MalI | GATC | 2 cut(s) | 248, 418 |
| MboI | GATC | 2 cut(s) | 246, 416 |
| MflI | RGATCY | 2 cut(s) | 246, 416 |
| MluCI | AATT | 2 cut(s) | 660, 876 |
| MlyI | GAGTC | 1 cut(s) | 592 |
| MmeI | TCCRAC | 4 cut(s) | 93, 176, 249, 274 |
| MnlI | CCTC | 6 cut(s) | 61, 182, 345, 586, 678, 745 |
| MroXI | GAANNNNTTC | 1 cut(s) | 880 |
| MseI | TTAA | 1 cut(s) | 609 |
| MslI | CAYNNNNRTG | 1 cut(s) | 131 |
| MspA1I | CMGCKG | 1 cut(s) | 653 |
| NdeII | GATC | 2 cut(s) | 246, 416 |
| NlaIII | CATG | 2 cut(s) | 268, 623 |
| NlaIV | GGNNCC | 1 cut(s) | 190 |
| NmeAIII | GCCGAG | 1 cut(s) | 807 |
| NmuCI | GTSAC | 1 cut(s) | 511 |
| PaeR7I | CTCGAG | 1 cut(s) | 326 |
| PdmI | GAANNNNTTC | 1 cut(s) | 880 |
| PfeI | GAWTC | 6 cut(s) | 116, 268, 397, 438, 849, 881 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 656 |
| PkrI | GCNGC | 1 cut(s) | 655 |
| PleI | GAGTC | 1 cut(s) | 591 |
| PpsI | GAGTC | 1 cut(s) | 591 |
| PsiI | TTATAA | 1 cut(s) | 459 |
| PspEI | GGTNACC | 1 cut(s) | 511 |
| PspN4I | GGNNCC | 1 cut(s) | 190 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 128, 160 |
| PstNI | CAGNNNCTG | 1 cut(s) | 656 |
| PsuI | RGATCY | 2 cut(s) | 246, 416 |
| PvuII | CAGCTG | 1 cut(s) | 653 |
| RsaI | GTAC | 4 cut(s) | 123, 190, 540, 706 |
| RsaNI | GTAC | 4 cut(s) | 122, 189, 539, 705 |
| RseI | CAYNNNNRTG | 1 cut(s) | 131 |
| SaqAI | TTAA | 1 cut(s) | 609 |
| SatI | GCNGC | 1 cut(s) | 654 |
| Sau3AI | GATC | 2 cut(s) | 246, 416 |
| SchI | GAGTC | 1 cut(s) | 592 |
| SfaNI | GCATC | 2 cut(s) | 811, 865 |
| Sfr274I | CTCGAG | 1 cut(s) | 326 |
| SlaI | CTCGAG | 1 cut(s) | 326 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 131 |
| SmlI | CTYRAG | 2 cut(s) | 326, 471 |
| SmoI | CTYRAG | 2 cut(s) | 326, 471 |
| Sse9I | AATT | 2 cut(s) | 660, 876 |
| SspMI | CTAG | 3 cut(s) | 414, 627, 702 |
| TaaI | ACNGT | 5 cut(s) | 157, 507, 517, 772, 796 |
| TaqI | TCGA | 4 cut(s) | 327, 390, 492, 847 |
| TasI | AATT | 2 cut(s) | 660, 876 |
| TatI | WGTACW | 2 cut(s) | 121, 538 |
| TfiI | GAWTC | 6 cut(s) | 116, 268, 397, 438, 849, 881 |
| Tru1I | TTAA | 1 cut(s) | 609 |
| Tru9I | TTAA | 1 cut(s) | 609 |
| TscAI | CASTG | 1 cut(s) | 649 |
| TseFI | GTSAC | 1 cut(s) | 511 |
| TseI | GCWGC | 1 cut(s) | 653 |
| Tsp45I | GTSAC | 1 cut(s) | 511 |
| TspDTI | ATGAA | 4 cut(s) | 260, 704, 753, 825 |
| TspGWI | ACGGA | 2 cut(s) | 705, 736 |
| TspRI | CASTG | 1 cut(s) | 649 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 656 |
| XbaI | TCTAGA | 1 cut(s) | 413 |
| XhoI | CTCGAG | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 1 cut(s) | 880 |
| XspI | CTAG | 3 cut(s) | 414, 627, 702 |