Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002580

Physical Location & Seq

Genomic Coordinates Forward (+)

13378929 .. 13381761

Gene Structure 2833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G31370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGGATAAGGAGAAATCTCCAGCACCTCCTTGTGGAGGTCTTCCTCCTCCATCTCCATCAGGTCGATGCTCTGCATTCTCAGAAGCTGGTCCCATTGGTCATGGTTCAGATGCTAATCGAATGAGTCATGATATTAGCCGTATGCTTGATAACCCACCTAAGAAGATTGGACATCGGCGAGCTCATTCTGAAATACTTACTCTCCCTGATGATTTGAGCTTTGATAGTGATCTTGGTGTGGTTGGTAATGCTGCTGATGGAGCTTCTTTCTCTGATGAGACTGAAGAAGATTTGCTCTCTATGTATCTTGATATGGATAAGTTTAATTCTTCTGCTACATCTTCTGCCCAAGTTGGTGAGCCATCAGGAACTGCTTGGAAAAATGAGACAATGATGCAGACAGGCACAGGCTCAACTTCCAATCCTCAGAATACGGTTAATAGTCTTGGCGAAAGGCCAAGAATCAGGCATCAACATAGCCAATCTATGGATGGTTCAATGAATATCAATGAGATGCTTATGTCGGGAAATGAAGATGATTCTGCTATTGATGCTAAGAAGTCTATGTCTGCTACTAAACTTGCTGAGCTTGCTCTCATTGATCCTAAACGTGCTAAGAGGATATGGGCAAACAGGCAGTCCGCAGCACGATCAAAAGAAAGGAAGACGAGATACATATTTGAGCTTGAGAGAAAAGTACAGACTTTGCAAACAGAGGCTACAACTCTCTCAGCCCAGTTGACCCTCTTACAGAGAGACACAAATGGCTTGACTGTTGAAAACAATGAGCTGAAGCTGCGGTTACAAACAATGGAGCAGCAGGTTCACTTGCAGGATGAACTAAACGAAGCACTAAAGGAGGAAATCCAGCATCTGAAGGTGTTGACTGGCCAAGTTGCTCCATCAGCGTTGAACTATGGGTCGTTTGGATCAAACCAGCAGCAATTCTATTCCAACAATCAGTCAATGCAAACAATCTTAGCTGCAAAACAGTTCCAGCAACTTCAGATTCATTCACAGAAGCAGCAACAACAACAACAACAACAACAACAGCAACACCAACAGCAGCAGCAGCAACAGCAACAGTATCAGTTTCAACAGCAACAGATGCAACAGCTTATGCAGCAGCGGCTTCAACAGCAAGAACAACAAAATGGAGTAAGACTCAAGCCTTCACAAGCCCAGAAAGAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

398

Amino Acids

44.69

Weight (kDa)

6.09

Isoelectric Point (pI)

57.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	201 - 252	2.2e-07	Basic region leucine zipper
bZIP_1	PF00170	203 - 255	1.1e-08	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06070 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370
fragaria_vesca	FvH4_4g11161 FvH4_4g11161 FvH4_4g11161
malus_domestica	MD04G1043600.v1.1 MD13G1271600.v1.1
prunus_persica	Prupe.1G197700_v2.0.a1 Prupe.1G197700_v2.0.a1
pyrus_communis	pycom13g27740
rosa_chinensis	RchiOBHm_Chr2g0157441 RchiOBHm_Chr4g0407301
rosa_laevigata	RLG00000008734 RLG00000020988
rosa_multiflora	Rmu_sc0001860.1_g000003 Rmu_sc0001860.1_g000004 Rmu_sc0004282.1_g000006 Rmu_sc0004282.1_g000007
rosa_roxburghii	Rroxscaffold_1G00031280 Rroxscaffold_2G00092210 Rroxscaffold_5G00351860 Rroxscaffold_7G00196960
rosa_rugosa	Rorug02G0461300 Rorug04G0078600
rosa_samantha	Rh2AG525600 Rh2BG539900 Rh2CG510200 Rh2DG548700 Rh4AG143300 Rh4BG140900 Rh4CG149700 Rh4DG137200
rosa_wichuraiana	Rw2G043510 Rw4G011650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	811
AccB7I	CCANNNNNTGG	1 cut(s)	487
AciI	CCGC	3 cut(s)	642, 799, 1129
AclWI	GGATC	2 cut(s)	596, 937
AcoI	YGGCCR	1 cut(s)	889
AcuI	CTGAAG	4 cut(s)	303, 812, 896, 989
AfaI	GTAC	1 cut(s)	699
AfiI	CCNNNNNNNGG	3 cut(s)	32, 35, 487
AgsI	TTSAA	5 cut(s)	498, 779, 913, 1097, 1136
Alw21I	GWGCWC	1 cut(s)	184
Alw26I	GTCTC	3 cut(s)	272, 380, 750
AlwI	GGATC	2 cut(s)	596, 937
AlwNI	CAGNNNCTG	3 cut(s)	86, 371, 874
AoxI	GGCC	2 cut(s)	455, 889
ArsI	GACNNNNNNTTYG	2 cut(s)	623, 655
AspS9I	GGNCC	1 cut(s)	89
AsuHPI	GGTGA	1 cut(s)	368
AvaII	GGWCC	1 cut(s)	89
BalI	TGGCCA	1 cut(s)	891
BanII	GRGCYC	1 cut(s)	184
BarI	GAAGNNNNNNTAC	2 cut(s)	656, 688
BbsI	GAAGAC	2 cut(s)	32, 671
Bbv12I	GWGCWC	1 cut(s)	184
BccI	CCATC	6 cut(s)	58, 64, 251, 370, 485, 910
BceAI	ACGGC	1 cut(s)	123
BcoDI	GTCTC	3 cut(s)	272, 380, 750
BfuAI	ACCTGC	1 cut(s)	811
BlpI	GCTNAGC	1 cut(s)	585
Bme18I	GGWCC	1 cut(s)	89
BmgT120I	GGNCC	1 cut(s)	89
BmiI	GGNNCC	1 cut(s)	91
BmrI	ACTGGG	1 cut(s)	730
BmsI	GCATC	8 cut(s)	56, 100, 384, 478, 504, 541, 880, 1098
BmuI	ACTGGG	1 cut(s)	730
BpiI	GAAGAC	2 cut(s)	32, 671
BplI	GAGNNNNNCTC	2 cut(s)	1149, 1181
Bpu1102I	GCTNAGC	1 cut(s)	585
BpuEI	CTTGAG	2 cut(s)	707, 1151
BsaBI	GATNNNNATC	2 cut(s)	114, 228
BsaXI	ACNNNNNCTCC	2 cut(s)	186, 216
Bsc4I	CCNNNNNNNGG	3 cut(s)	32, 35, 487
Bse1I	ACTGG	2 cut(s)	736, 892
Bse8I	GATNNNNATC	2 cut(s)	114, 228
BseGI	GGATG	2 cut(s)	496, 841
BseJI	GATNNNNATC	2 cut(s)	114, 228
BseLI	CCNNNNNNNGG	3 cut(s)	32, 35, 487
BseMII	CTCAG	4 cut(s)	93, 440, 576, 744
BseNI	ACTGG	2 cut(s)	736, 892
BseRI	GAGGAG	1 cut(s)	36
BshFI	GGCC	2 cut(s)	457, 891
BsiHKAI	GWGCWC	1 cut(s)	184
BslFI	GGGAC	1 cut(s)	75
BslI	CCNNNNNNNGG	3 cut(s)	32, 35, 487
BsmAI	GTCTC	3 cut(s)	272, 380, 750
BsmFI	GGGAC	1 cut(s)	75
BsmI	GAATGC	1 cut(s)	74
BsnI	GGCC	2 cut(s)	457, 891
Bsp1286I	GDGCHC	1 cut(s)	184
Bsp143I	GATC	4 cut(s)	229, 601, 650, 929
Bsp1720I	GCTNAGC	1 cut(s)	585
BspACI	CCGC	3 cut(s)	642, 799, 1129
BspANI	GGCC	2 cut(s)	457, 891
BspCNI	CTCAG	4 cut(s)	92, 439, 577, 743
BspHI	TCATGA	1 cut(s)	127
BspLI	GGNNCC	1 cut(s)	91
BspMI	ACCTGC	1 cut(s)	811
BspPI	GGATC	2 cut(s)	596, 937
BsrI	ACTGG	2 cut(s)	736, 892
BssMI	GATC	4 cut(s)	229, 601, 650, 929
Bst4CI	ACNGT	4 cut(s)	436, 775, 993, 1086
BstAPI	GCANNNNNTGC	1 cut(s)	1108
BstC8I	GCNNGC	2 cut(s)	180, 591
BstDEI	CTNAG	8 cut(s)	79, 159, 426, 555, 585, 615, 730, 979
BstENI	CCTNNNNNAGG	1 cut(s)	33
BstF5I	GGATG	2 cut(s)	496, 841
BstKTI	GATC	4 cut(s)	232, 604, 653, 932
BstMAI	GTCTC	3 cut(s)	272, 380, 750
BstMBI	GATC	4 cut(s)	229, 601, 650, 929
BstV2I	GAAGAC	2 cut(s)	32, 671
BsuRI	GGCC	2 cut(s)	457, 891
BtsCI	GGATG	2 cut(s)	496, 841
BveI	ACCTGC	1 cut(s)	811
Cac8I	GCNNGC	2 cut(s)	180, 591
CaiI	CAGNNNCTG	3 cut(s)	86, 371, 874
CciI	TCATGA	1 cut(s)	127
Cfr13I	GGNCC	1 cut(s)	89
Csp6I	GTAC	1 cut(s)	698
CviAII	CATG	2 cut(s)	101, 128
CviQI	GTAC	1 cut(s)	698
DdeI	CTNAG	8 cut(s)	79, 159, 426, 555, 585, 615, 730, 979
DpnI	GATC	4 cut(s)	231, 603, 652, 931
DpnII	GATC	4 cut(s)	229, 601, 650, 929
EaeI	YGGCCR	1 cut(s)	889
Ecl136II	GAGCTC	1 cut(s)	182
Eco24I	GRGCYC	1 cut(s)	184
Eco47I	GGWCC	1 cut(s)	89
Eco53kI	GAGCTC	1 cut(s)	182
Eco57I	CTGAAG	4 cut(s)	303, 812, 896, 989
EcoICRI	GAGCTC	1 cut(s)	182
EcoNI	CCTNNNNNAGG	1 cut(s)	33
EcoT38I	GRGCYC	1 cut(s)	184
FaeI	CATG	2 cut(s)	104, 131
FaqI	GGGAC	1 cut(s)	75
FatI	CATG	2 cut(s)	100, 127
FokI	GGATG	2 cut(s)	503, 848
FriOI	GRGCYC	1 cut(s)	184
HaeIII	GGCC	2 cut(s)	457, 891
Hin1II	CATG	2 cut(s)	104, 131
HincII	GTYRAC	2 cut(s)	741, 885
HindII	GTYRAC	2 cut(s)	741, 885
HinfI	GANTC	5 cut(s)	124, 462, 539, 1009, 1164
HphI	GGTGA	1 cut(s)	368
Hpy166II	GTNNAC	3 cut(s)	741, 826, 885
Hpy188I	TCNGA	7 cut(s)	82, 109, 190, 274, 429, 876, 1008
Hpy188III	TCNNGA	4 cut(s)	128, 308, 366, 525
Hpy8I	GTNNAC	3 cut(s)	741, 826, 885
HpyAV	CCTTC	2 cut(s)	871, 1182
HpyCH4III	ACNGT	4 cut(s)	436, 775, 993, 1086
HpyCH4IV	ACGT	1 cut(s)	610
HpyCH4V	TGCA	8 cut(s)	74, 397, 709, 832, 970, 986, 1111, 1123
HpyF3I	CTNAG	8 cut(s)	79, 159, 426, 555, 585, 615, 730, 979
HpySE526I	ACGT	1 cut(s)	610
Hsp92II	CATG	2 cut(s)	104, 131
Kzo9I	GATC	4 cut(s)	229, 601, 650, 929
LmnI	GCTCC	3 cut(s)	260, 814, 904
LweI	GCATC	8 cut(s)	56, 100, 384, 478, 504, 541, 880, 1098
MaeII	ACGT	1 cut(s)	610
MaeIII	GTNAC	1 cut(s)	801
MalI	GATC	4 cut(s)	231, 603, 652, 931
MboI	GATC	4 cut(s)	229, 601, 650, 929
MboII	GAAGA	8 cut(s)	32, 175, 296, 299, 321, 333, 545, 676
MhlI	GDGCHC	1 cut(s)	184
MlsI	TGGCCA	1 cut(s)	891
MluCI	AATT	2 cut(s)	325, 944
MluNI	TGGCCA	1 cut(s)	891
MlyI	GAGTC	2 cut(s)	133, 1158
MmeI	TCCRAC	1 cut(s)	978
MnlI	CCTC	9 cut(s)	29, 36, 54, 57, 435, 612, 709, 755, 853
Mox20I	TGGCCA	1 cut(s)	891
MscI	TGGCCA	1 cut(s)	891
MseI	TTAA	2 cut(s)	324, 438
Msp20I	TGGCCA	1 cut(s)	891
MspA1I	CMGCKG	1 cut(s)	1129
Mva1269I	GAATGC	1 cut(s)	74
NdeII	GATC	4 cut(s)	229, 601, 650, 929
NlaIII	CATG	2 cut(s)	104, 131
NlaIV	GGNNCC	1 cut(s)	91
PagI	TCATGA	1 cut(s)	127
PctI	GAATGC	1 cut(s)	74
PfeI	GAWTC	3 cut(s)	462, 539, 1009
PflMI	CCANNNNNTGG	1 cut(s)	487
PleI	GAGTC	2 cut(s)	132, 1158
PpsI	GAGTC	2 cut(s)	132, 1158
Psp124BI	GAGCTC	1 cut(s)	184
PspN4I	GGNNCC	1 cut(s)	91
PspPI	GGNCC	1 cut(s)	89
PstNI	CAGNNNCTG	3 cut(s)	86, 371, 874
RsaI	GTAC	1 cut(s)	699
RsaNI	GTAC	1 cut(s)	698
SacI	GAGCTC	1 cut(s)	184
SaqAI	TTAA	2 cut(s)	324, 438
Sau3AI	GATC	4 cut(s)	229, 601, 650, 929
Sau96I	GGNCC	1 cut(s)	89
SchI	GAGTC	2 cut(s)	133, 1158
SduI	GDGCHC	1 cut(s)	184
SfaNI	GCATC	8 cut(s)	56, 100, 384, 478, 504, 541, 880, 1098
SinI	GGWCC	1 cut(s)	89
SmlI	CTYRAG	2 cut(s)	686, 1166
SmoI	CTYRAG	2 cut(s)	686, 1166
Sse9I	AATT	2 cut(s)	325, 944
SsiI	CCGC	3 cut(s)	642, 799, 1129
SstI	GAGCTC	1 cut(s)	184
TaaI	ACNGT	4 cut(s)	436, 775, 993, 1086
TaiI	ACGT	1 cut(s)	613
TaqI	TCGA	2 cut(s)	64, 118
TasI	AATT	2 cut(s)	325, 944
TatI	WGTACW	1 cut(s)	697
TauI	GCSGC	1 cut(s)	1132
TfiI	GAWTC	3 cut(s)	462, 539, 1009
Tru1I	TTAA	2 cut(s)	324, 438
Tru9I	TTAA	2 cut(s)	324, 438
TspDTI	ATGAA	4 cut(s)	515, 546, 852, 1001
Van91I	CCANNNNNTGG	1 cut(s)	487
VpaK11BI	GGWCC	1 cut(s)	89
XagI	CCTNNNNNAGG	1 cut(s)	33
XcmI	CCANNNNNNNNNTGG	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.