transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06070 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 |
| fragaria_vesca | FvH4_4g11161 FvH4_4g11161 FvH4_4g11161 |
| malus_domestica | MD04G1043600.v1.1 MD13G1271600.v1.1 |
| prunus_persica | Prupe.1G197700_v2.0.a1 Prupe.1G197700_v2.0.a1 |
| pyrus_communis | pycom13g27740 |
| rosa_chinensis | RchiOBHm_Chr2g0157441 RchiOBHm_Chr4g0407301 |
| rosa_laevigata | RLG00000008734 RLG00000020988 |
| rosa_multiflora | Rmu_sc0001860.1_g000003 Rmu_sc0001860.1_g000004 Rmu_sc0004282.1_g000006 Rmu_sc0004282.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00031280 Rroxscaffold_2G00092210 Rroxscaffold_5G00351860 Rroxscaffold_7G00196960 |
| rosa_rugosa | Rorug02G0461300 Rorug04G0078600 |
| rosa_samantha | Rh2AG525600 Rh2BG539900 Rh2CG510200 Rh2DG548700 Rh4AG143300 Rh4BG140900 Rh4CG149700 Rh4DG137200 |
| rosa_wichuraiana | Rw2G043510 Rw4G011650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 195 |
| Acc36I | ACCTGC | 1 cut(s) | 216 |
| AccB1I | GGYRCC | 1 cut(s) | 699 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 718, 1142 |
| AciI | CCGC | 1 cut(s) | 904 |
| AclWI | GGATC | 3 cut(s) | 733, 830, 863 |
| AcoI | YGGCCR | 2 cut(s) | 1123, 1189 |
| AcsI | RAATTY | 2 cut(s) | 557, 1098 |
| AcuI | CTGAAG | 2 cut(s) | 1298, 1437 |
| AfaI | GTAC | 3 cut(s) | 542, 676, 908 |
| AfeI | AGCGCT | 1 cut(s) | 642 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 197, 221, 550, 696, 718, 1142, 1187 |
| AgsI | TTSAA | 7 cut(s) | 234, 562, 590, 923, 1027, 1250, 1408 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 532 |
| AhlI | ACTAGT | 1 cut(s) | 647 |
| AjiI | CACGTC | 1 cut(s) | 419 |
| AjnI | CCWGG | 2 cut(s) | 319, 1180 |
| Alw21I | GWGCWC | 1 cut(s) | 764 |
| Alw26I | GTCTC | 5 cut(s) | 192, 509, 679, 984, 1434 |
| AlwI | GGATC | 3 cut(s) | 733, 830, 863 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 611, 1108 |
| Aor51HI | AGCGCT | 1 cut(s) | 642 |
| AoxI | GGCC | 3 cut(s) | 297, 1123, 1189 |
| ApoI | RAATTY | 2 cut(s) | 557, 1098 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 857, 889 |
| AspLEI | GCGC | 4 cut(s) | 170, 196, 643, 1035 |
| AspS9I | GGNCC | 3 cut(s) | 497, 1145, 1178 |
| AsuHPI | GGTGA | 1 cut(s) | 608 |
| AvaII | GGWCC | 3 cut(s) | 497, 1145, 1178 |
| BaeGI | GKGCMC | 1 cut(s) | 424 |
| BalI | TGGCCA | 2 cut(s) | 1125, 1191 |
| BanI | GGYRCC | 1 cut(s) | 699 |
| BanII | GRGCYC | 1 cut(s) | 764 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 890, 922 |
| BbsI | GAAGAC | 2 cut(s) | 266, 531 |
| Bbv12I | GWGCWC | 1 cut(s) | 764 |
| BccI | CCATC | 6 cut(s) | 226, 488, 610, 716, 743, 1039 |
| BciT130I | CCWGG | 2 cut(s) | 321, 1182 |
| BcoDI | GTCTC | 5 cut(s) | 192, 509, 679, 984, 1434 |
| BcuI | ACTAGT | 1 cut(s) | 647 |
| BfaI | CTAG | 3 cut(s) | 59, 648, 830 |
| BfmI | CTRYAG | 4 cut(s) | 51, 312, 654, 777 |
| BfoI | RGCGCY | 1 cut(s) | 644 |
| BfuAI | ACCTGC | 1 cut(s) | 216 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 23 |
| Bme1390I | CCNGG | 2 cut(s) | 321, 1182 |
| Bme18I | GGWCC | 3 cut(s) | 497, 1145, 1178 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 532 |
| BmgBI | CACGTC | 1 cut(s) | 419 |
| BmgT120I | GGNCC | 3 cut(s) | 497, 1145, 1178 |
| BmiI | GGNNCC | 1 cut(s) | 701 |
| BmrFI | CCNGG | 2 cut(s) | 321, 1182 |
| BmsI | GCATC | 8 cut(s) | 738, 891, 1060, 1072, 1291, 1306, 1315, 1384 |
| BpiI | GAAGAC | 2 cut(s) | 266, 531 |
| BpmI | CTGGAG | 2 cut(s) | 612, 1241 |
| BsaI | GGTCTC | 1 cut(s) | 679 |
| BsaJI | CCNNGG | 2 cut(s) | 398, 472 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 197, 221, 550, 696, 718, 1142, 1187 |
| Bse118I | RCCGGY | 1 cut(s) | 22 |
| Bse1I | ACTGG | 2 cut(s) | 148, 1126 |
| Bse3DI | GCAATG | 1 cut(s) | 909 |
| BseBI | CCWGG | 2 cut(s) | 321, 1182 |
| BseDI | CCNNGG | 2 cut(s) | 398, 472 |
| BseGI | GGATG | 1 cut(s) | 727 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 197, 221, 550, 696, 718, 1142, 1187 |
| BseMI | GCAATG | 1 cut(s) | 909 |
| BseMII | CTCAG | 3 cut(s) | 125, 777, 1283 |
| BseNI | ACTGG | 2 cut(s) | 148, 1126 |
| BseSI | GKGCMC | 1 cut(s) | 424 |
| BsgI | GTGCAG | 2 cut(s) | 600, 1221 |
| Bsh1285I | CGRYCG | 1 cut(s) | 142 |
| BshFI | GGCC | 3 cut(s) | 299, 1125, 1191 |
| BshNI | GGYRCC | 1 cut(s) | 699 |
| BsiEI | CGRYCG | 1 cut(s) | 142 |
| BsiHKAI | GWGCWC | 1 cut(s) | 764 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 197, 221, 550, 696, 718, 1142, 1187 |
| BsmAI | GTCTC | 5 cut(s) | 192, 509, 679, 984, 1434 |
| BsmI | GAATGC | 1 cut(s) | 387 |
| BsnI | GGCC | 3 cut(s) | 299, 1125, 1191 |
| Bso31I | GGTCTC | 1 cut(s) | 679 |
| Bsp1286I | GDGCHC | 2 cut(s) | 424, 764 |
| Bsp143I | GATC | 3 cut(s) | 725, 835, 855 |
| BspACI | CCGC | 1 cut(s) | 904 |
| BspANI | GGCC | 3 cut(s) | 299, 1125, 1191 |
| BspCNI | CTCAG | 3 cut(s) | 124, 776, 1282 |
| BspHI | TCATGA | 2 cut(s) | 367, 679 |
| BspLI | GGNNCC | 1 cut(s) | 701 |
| BspMAI | CTGCAG | 3 cut(s) | 55, 316, 781 |
| BspMI | ACCTGC | 1 cut(s) | 216 |
| BspPI | GGATC | 3 cut(s) | 733, 830, 863 |
| BspT107I | GGYRCC | 1 cut(s) | 699 |
| BspTNI | GGTCTC | 1 cut(s) | 679 |
| BsrDI | GCAATG | 1 cut(s) | 909 |
| BsrFI | RCCGGY | 1 cut(s) | 22 |
| BsrI | ACTGG | 2 cut(s) | 148, 1126 |
| BssAI | RCCGGY | 1 cut(s) | 22 |
| BssECI | CCNNGG | 2 cut(s) | 398, 472 |
| BssMI | GATC | 3 cut(s) | 725, 835, 855 |
| BssT1I | CCWWGG | 2 cut(s) | 398, 472 |
| Bst2UI | CCWGG | 2 cut(s) | 321, 1182 |
| Bst4CI | ACNGT | 3 cut(s) | 140, 1019, 1471 |
| Bst6I | CTCTTC | 3 cut(s) | 277, 762, 1233 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 623, 1303 |
| BstC8I | GCNNGC | 3 cut(s) | 1037, 1189, 1193 |
| BstDEI | CTNAG | 3 cut(s) | 111, 763, 1269 |
| BstF5I | GGATG | 1 cut(s) | 727 |
| BstH2I | RGCGCY | 1 cut(s) | 644 |
| BstHHI | GCGC | 4 cut(s) | 170, 196, 643, 1035 |
| BstKTI | GATC | 3 cut(s) | 728, 838, 858 |
| BstMAI | GTCTC | 5 cut(s) | 192, 509, 679, 984, 1434 |
| BstMBI | GATC | 3 cut(s) | 725, 835, 855 |
| BstMCI | CGRYCG | 1 cut(s) | 142 |
| BstNI | CCWGG | 2 cut(s) | 321, 1182 |
| BstNSI | RCATGY | 1 cut(s) | 1330 |
| BstSCI | CCNGG | 2 cut(s) | 319, 1180 |
| BstSFI | CTRYAG | 4 cut(s) | 51, 312, 654, 777 |
| BstSLI | GKGCMC | 1 cut(s) | 424 |
| BstV2I | GAAGAC | 2 cut(s) | 266, 531 |
| BstX2I | RGATCY | 1 cut(s) | 855 |
| BstYI | RGATCY | 1 cut(s) | 855 |
| BsuRI | GGCC | 3 cut(s) | 299, 1125, 1191 |
| BtrI | CACGTC | 1 cut(s) | 419 |
| BtsCI | GGATG | 1 cut(s) | 727 |
| BtsIMutI | CAGTG | 2 cut(s) | 345, 1024 |
| BveI | ACCTGC | 1 cut(s) | 216 |
| Cac8I | GCNNGC | 3 cut(s) | 1037, 1189, 1193 |
| CaiI | CAGNNNCTG | 2 cut(s) | 611, 1108 |
| CciI | TCATGA | 2 cut(s) | 367, 679 |
| CfoI | GCGC | 4 cut(s) | 170, 196, 643, 1035 |
| Cfr10I | RCCGGY | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 3 cut(s) | 497, 1145, 1178 |
| Csp6I | GTAC | 3 cut(s) | 541, 675, 907 |
| CviAII | CATG | 8 cut(s) | 197, 368, 670, 680, 799, 1219, 1327, 1423 |
| CviQI | GTAC | 3 cut(s) | 541, 675, 907 |
| DdeI | CTNAG | 3 cut(s) | 111, 763, 1269 |
| DpnI | GATC | 3 cut(s) | 727, 837, 857 |
| DpnII | GATC | 3 cut(s) | 725, 835, 855 |
| DraI | TTTAAA | 1 cut(s) | 1440 |
| DriI | GACNNNNNGTC | 1 cut(s) | 532 |
| EaeI | YGGCCR | 2 cut(s) | 1123, 1189 |
| Eam1104I | CTCTTC | 3 cut(s) | 277, 762, 1233 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 532 |
| EarI | CTCTTC | 3 cut(s) | 277, 762, 1233 |
| Ecl136II | GAGCTC | 1 cut(s) | 762 |
| Eco130I | CCWWGG | 2 cut(s) | 398, 472 |
| Eco24I | GRGCYC | 1 cut(s) | 764 |
| Eco31I | GGTCTC | 1 cut(s) | 679 |
| Eco47I | GGWCC | 3 cut(s) | 497, 1145, 1178 |
| Eco47III | AGCGCT | 1 cut(s) | 642 |
| Eco53kI | GAGCTC | 1 cut(s) | 762 |
| Eco57I | CTGAAG | 2 cut(s) | 1298, 1437 |
| EcoICRI | GAGCTC | 1 cut(s) | 762 |
| EcoRII | CCWGG | 2 cut(s) | 319, 1180 |
| EcoT14I | CCWWGG | 2 cut(s) | 398, 472 |
| EcoT38I | GRGCYC | 1 cut(s) | 764 |
| ErhI | CCWWGG | 2 cut(s) | 398, 472 |
| FaeI | CATG | 8 cut(s) | 200, 371, 673, 683, 802, 1222, 1330, 1426 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1059, 1091 |
| FatI | CATG | 8 cut(s) | 196, 367, 669, 679, 798, 1218, 1326, 1422 |
| FokI | GGATG | 1 cut(s) | 734 |
| FriOI | GRGCYC | 1 cut(s) | 764 |
| FspBI | CTAG | 3 cut(s) | 59, 648, 830 |
| FspI | TGCGCA | 1 cut(s) | 195 |
| GlaI | GCGC | 4 cut(s) | 169, 195, 642, 1034 |
| GsuI | CTGGAG | 2 cut(s) | 612, 1241 |
| HaeII | RGCGCY | 1 cut(s) | 644 |
| HaeIII | GGCC | 3 cut(s) | 299, 1125, 1191 |
| HapII | CCGG | 1 cut(s) | 23 |
| HhaI | GCGC | 4 cut(s) | 170, 196, 643, 1035 |
| Hin1II | CATG | 8 cut(s) | 200, 371, 673, 683, 802, 1222, 1330, 1426 |
| Hin6I | GCGC | 4 cut(s) | 168, 194, 641, 1033 |
| HinP1I | GCGC | 4 cut(s) | 168, 194, 641, 1033 |
| HincII | GTYRAC | 1 cut(s) | 1462 |
| HindII | GTYRAC | 1 cut(s) | 1462 |
| HindIII | AAGCTT | 1 cut(s) | 812 |
| HinfI | GANTC | 5 cut(s) | 46, 144, 350, 785, 976 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 1 cut(s) | 608 |
| Hpy166II | GTNNAC | 6 cut(s) | 209, 345, 599, 1060, 1145, 1462 |
| Hpy188III | TCNNGA | 5 cut(s) | 59, 368, 446, 680, 1258 |
| Hpy8I | GTNNAC | 6 cut(s) | 209, 345, 599, 1060, 1145, 1462 |
| HpyAV | CCTTC | 2 cut(s) | 452, 510 |
| HpyCH4III | ACNGT | 3 cut(s) | 140, 1019, 1471 |
| HpyCH4IV | ACGT | 2 cut(s) | 418, 844 |
| HpyF3I | CTNAG | 3 cut(s) | 111, 763, 1269 |
| HpySE526I | ACGT | 2 cut(s) | 418, 844 |
| Hsp92II | CATG | 8 cut(s) | 200, 371, 673, 683, 802, 1222, 1330, 1426 |
| HspAI | GCGC | 4 cut(s) | 168, 194, 641, 1033 |
| Kzo9I | GATC | 3 cut(s) | 725, 835, 855 |
| LmnI | GCTCC | 4 cut(s) | 631, 1048, 1260, 1415 |
| LweI | GCATC | 8 cut(s) | 738, 891, 1060, 1072, 1291, 1306, 1315, 1384 |
| MaeI | CTAG | 3 cut(s) | 59, 648, 830 |
| MaeII | ACGT | 2 cut(s) | 418, 844 |
| MaeIII | GTNAC | 3 cut(s) | 332, 436, 467 |
| MalI | GATC | 3 cut(s) | 727, 837, 857 |
| MboI | GATC | 3 cut(s) | 725, 835, 855 |
| MboII | GAAGA | 9 cut(s) | 148, 151, 264, 271, 536, 558, 779, 910, 1220 |
| MfeI | CAATTG | 1 cut(s) | 971 |
| MflI | RGATCY | 1 cut(s) | 855 |
| MhlI | GDGCHC | 2 cut(s) | 424, 764 |
| MlsI | TGGCCA | 2 cut(s) | 1125, 1191 |
| MluCI | AATT | 9 cut(s) | 93, 404, 432, 557, 562, 971, 1022, 1098, 1244 |
| MluNI | TGGCCA | 2 cut(s) | 1125, 1191 |
| MlyI | GAGTC | 1 cut(s) | 970 |
| MmeI | TCCRAC | 1 cut(s) | 70 |
| Mox20I | TGGCCA | 2 cut(s) | 1125, 1191 |
| MscI | TGGCCA | 2 cut(s) | 1125, 1191 |
| MseI | TTAA | 4 cut(s) | 131, 1077, 1439, 1486 |
| MslI | CAYNNNNRTG | 1 cut(s) | 417 |
| Msp20I | TGGCCA | 2 cut(s) | 1125, 1191 |
| MspA1I | CMGCKG | 4 cut(s) | 623, 782, 878, 1372 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 2 cut(s) | 321, 1182 |
| MunI | CAATTG | 1 cut(s) | 971 |
| Mva1269I | GAATGC | 1 cut(s) | 387 |
| MvaI | CCWGG | 2 cut(s) | 321, 1182 |
| NdeII | GATC | 3 cut(s) | 725, 835, 855 |
| NlaIII | CATG | 8 cut(s) | 200, 371, 673, 683, 802, 1222, 1330, 1426 |
| NlaIV | GGNNCC | 1 cut(s) | 701 |
| NmuCI | GTSAC | 3 cut(s) | 332, 436, 467 |
| NsbI | TGCGCA | 1 cut(s) | 195 |
| NspI | RCATGY | 1 cut(s) | 1330 |
| PagI | TCATGA | 2 cut(s) | 367, 679 |
| PctI | GAATGC | 1 cut(s) | 387 |
| PfeI | GAWTC | 4 cut(s) | 46, 144, 350, 785 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 718, 1142 |
| PleI | GAGTC | 1 cut(s) | 970 |
| PpsI | GAGTC | 1 cut(s) | 970 |
| Psp124BI | GAGCTC | 1 cut(s) | 764 |
| Psp6I | CCWGG | 2 cut(s) | 319, 1180 |
| PspGI | CCWGG | 2 cut(s) | 319, 1180 |
| PspN4I | GGNNCC | 1 cut(s) | 701 |
| PspPI | GGNCC | 3 cut(s) | 497, 1145, 1178 |
| PstI | CTGCAG | 3 cut(s) | 55, 316, 781 |
| PstNI | CAGNNNCTG | 2 cut(s) | 611, 1108 |
| PsuI | RGATCY | 1 cut(s) | 855 |
| PvuII | CAGCTG | 4 cut(s) | 623, 782, 878, 1372 |
| RsaI | GTAC | 3 cut(s) | 542, 676, 908 |
| RsaNI | GTAC | 3 cut(s) | 541, 675, 907 |
| RseI | CAYNNNNRTG | 1 cut(s) | 417 |
| SacI | GAGCTC | 1 cut(s) | 764 |
| SaqAI | TTAA | 4 cut(s) | 131, 1077, 1439, 1486 |
| Sau3AI | GATC | 3 cut(s) | 725, 835, 855 |
| Sau96I | GGNCC | 3 cut(s) | 497, 1145, 1178 |
| SchI | GAGTC | 1 cut(s) | 970 |
| ScrFI | CCNGG | 2 cut(s) | 321, 1182 |
| SduI | GDGCHC | 2 cut(s) | 424, 764 |
| SfaNI | GCATC | 8 cut(s) | 738, 891, 1060, 1072, 1291, 1306, 1315, 1384 |
| SfcI | CTRYAG | 4 cut(s) | 51, 312, 654, 777 |
| SinI | GGWCC | 3 cut(s) | 497, 1145, 1178 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 417 |
| SpeI | ACTAGT | 1 cut(s) | 647 |
| Sse9I | AATT | 9 cut(s) | 93, 404, 432, 557, 562, 971, 1022, 1098, 1244 |
| SsiI | CCGC | 1 cut(s) | 904 |
| SspI | AATATT | 1 cut(s) | 664 |
| SspMI | CTAG | 3 cut(s) | 59, 648, 830 |
| SstI | GAGCTC | 1 cut(s) | 764 |
| StyD4I | CCNGG | 2 cut(s) | 319, 1180 |
| StyI | CCWWGG | 2 cut(s) | 398, 472 |
| TaaI | ACNGT | 3 cut(s) | 140, 1019, 1471 |
| TaiI | ACGT | 2 cut(s) | 421, 847 |
| TaqI | TCGA | 2 cut(s) | 142, 758 |
| TasI | AATT | 9 cut(s) | 93, 404, 432, 557, 562, 971, 1022, 1098, 1244 |
| TfiI | GAWTC | 4 cut(s) | 46, 144, 350, 785 |
| Tru1I | TTAA | 4 cut(s) | 131, 1077, 1439, 1486 |
| Tru9I | TTAA | 4 cut(s) | 131, 1077, 1439, 1486 |
| TscAI | CASTG | 2 cut(s) | 352, 1024 |
| TseFI | GTSAC | 3 cut(s) | 332, 436, 467 |
| Tsp45I | GTSAC | 3 cut(s) | 332, 436, 467 |
| TspDTI | ATGAA | 6 cut(s) | 17, 78, 264, 492, 558, 1169 |
| TspGWI | ACGGA | 1 cut(s) | 351 |
| TspRI | CASTG | 2 cut(s) | 352, 1024 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 718, 1142 |
| VpaK11BI | GGWCC | 3 cut(s) | 497, 1145, 1178 |
| XapI | RAATTY | 2 cut(s) | 557, 1098 |
| XbaI | TCTAGA | 1 cut(s) | 58 |
| XceI | RCATGY | 1 cut(s) | 1330 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 719 |
| XspI | CTAG | 3 cut(s) | 59, 648, 830 |