Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002580

Physical Location & Seq

Genomic Coordinates Forward (+)

12088520 .. 12093510

Gene Structure 4991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0078600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGGCTCCGACGCCTTCTTCCTCCAAATCCAATCACACCCACCACCAAACCCTAACCAAAACCCCACAATCCCGCCACCGCCTCCAGTTCTTGAAACCCCACCCTTCCCCCAACCCCACCTCAGCCCTAAGAGAATCTCCGGCCGAGCACCCCGTCGAAGTCCTCGCCCGGATCCGAGACTACCCAGAATCCAAAGACCCACAACCACCCGCCCAGGTCCTCCAAATCAACCCACAAAAACAGAGCATTCGGGTCCGGGCCGATTTCGGGTACCGGGATTTCACCCTAGATGGGGTTTCGGAGTCCGAAAGCGACGATCTTGGAGCCTTCTACAGCAAATTCGTGCAGTCGAGGATTGATAGTGTGAAGATGGGGGAGAAATGTACTATTATGATGTATGGGCCAACTGGGTCTGGGAAGAGTCACACCATGTTTGGGTGCTGCAAGCAACCAGGGATTGTGTATAGGTCGTTGAAGGATATTTTGGGTGATGGGGAAGATTGTGTGGGGACGTTTGTGCAGGTCACGGTTTTGGAGATTTATAATGAGGAGATTTATGATCTGTTGTCTAGTAATGGTGGTGGTGGGTTTGGGTTTGGATGGCCTAGAGGAAATGGCTCCAATTCTAAGGTTAGACTTGAAGTAATGGGAAAGAAGGCAAAGAATGCAACCTACATTTCTGGAAATGAAGCTGGAAAAATTTCGAAAGAGATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAGAGTACCCTTTGCAATGAAAGAAGTTCTCGGAGCCATTGCATGATAATTCTTGATGTCCCAACAGTGGGTGGGCGCTTGATGCTTGTTGACATGGCTGGTTCTGAAAATATTGAGCAAGCTGGACAAATTGGGTTTGAGGCAAAAATGCAGACTGGAAAGATCAACCAAGGAAACATAGCACTAAAAAGAGTGGTTGAATCCATTGCAAATGGTGATTCACATGTGCCCTTCAGAGACAGCAAGCTTACCATGCTTCTACAGGACTCTTTTGAGGATGACAAGACAAAAATTTTAATGGTTCTGTGTGCAAGCCCAGATCCCAAGGAGATACACAAGACAATCTGCACCCTTGAATATGGCGCAAAAGCAAAATGTATAGTCCGTGGTCCTCATACGCCAATTAAGGATAAAGCTGGGACTGAAGATTCATCTGCAGTCATTTTAGGATCGAGGATTGCTGCCATGGATGAATTTATCCTGAAACTACAAAAGGAGAACAAGCTGAAAGAAAAGGAGCGCAGTGAAGCTCATAAGCAGCTACTGAAGAAAGAAGAAGAGGTTGCTGCATTGAGAGCTAAACTTCAGTCAATGGAAGGGAAGGGATCTGGAGCAAAAGAGGAAGAAATCAACTTGAAGGTGAATGAAGTAGCCCAGACTCTGAAACAGGAGTTGGAAAAGAAGTTGGAGGAGTGCCAGAGAATGGCCAATGAGTTTGTTGAATTGGAGAGGAGGAGAATGGAAGAAAGGATATTGCAACAGCAACAGGAAGTTGAAATGTTGAGGAAGCGGTTGGAGGAAATTGAGTTTGAGCTATGCCGCTCAAGTGATGGAAATGGCGTGGAGAGTGGGAGAAAGGACAATGATGGAATCCAGTTTGCCAAAAGGTTGATGGGGATCTATTCCAGTGATGGTGCCGGGATGATGAAGTCAATGGACATGGTGAAGTCCATGGATTTGGACATGGATGATCAAGAACCTTTTGCTGGTGTGGTGAAATATGTAGGTGTGAACTGCGGGGTAACTGGGGCTTATCAATCTGACAGCAATAGTGTCCAAGGATTTGTGAATCAGCCTCAATTAAATGCCATTGCTACAGAGAATAATGATTCCTTTGCAGCAAAATATGCTGACAGGGTATGCCTCAGCACTGTTTTTGAGGAAGAAGAAATGGAAGAGGAAGAACGTAAGGAGAATGTGGATGTTGAAGAAGTGGAGAAAGAAGTTATAGAGGAAAAGAGAGTGTGTATGGTTGATAGGTCTAACCTCAAAAGTAATTATAGTCTGGGCTCCTTGGTATCTTTACCTCATGATTATCAGCACACACCAACTTTGAATCAGCCAAGCAGAAATGTAGGGGAAGAAGATGGCAAGGGAGGACCAGACGATAGGCTTGTTAGAATCCGGAACATATTTACACTCTGTGGAAACTACAGAGAGCTCTCTCAACACATCACAAGTCCAGCACCTACTCTGAAGCCACTTGCATCATTCGAATCAGAAAATGAAAAGAAACTGACAGAACTAGATGTACACAAAAACAATGAGACGCCATTGGGTTCCAAGGAGAACTACAACCAGTCAAATGATGGCACTGATGCAGATTGTGAAGTGTATGTGAAATGGGAGTCCTCTAAAGAAAATCCAGGGAAGTTCATTACAACTCTTAGGGTTGTAAAAGATGCAAGCCTTATTGACCTGCGAAAGCTTATTGAAATCTATCTTGGTGCAGATAATCAAGCTTTCAACTTTCTCGTGCTTGGGGATCCCACTGGAGCTGCAGTACCAAGGGAGAAGGAAGCAACAATACAGACGACTAAGCTTCCCCTTTGCAATGGTGAAACCAATGGATACTTGGCTTGCTTGAGACCATTGAAGGGAACACAGGGAATGCAATGTAGCCCAACTCAGCAGCTCCCATTGACTCCTCTCCCCTTGAGCTCACTGGAGAACAGACTACCAGTCACCCCAACAACTTGCTTAACACCAAAAGTAGCACCAAACTTAGGTTCTACTCCTTTTATTACAGTCAGAAGATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

927

Amino Acids

103.08

Weight (kDa)

5.81

Isoelectric Point (pI)

51.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	58 - 189	1.9e-08	Microtubule binding
Kinesin	PF00225	78 - 374	1.2e-60	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06070 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370 AT2G31370
fragaria_vesca	FvH4_4g11161 FvH4_4g11161 FvH4_4g11161
malus_domestica	MD04G1043600.v1.1 MD13G1271600.v1.1
prunus_persica	Prupe.1G197700_v2.0.a1 Prupe.1G197700_v2.0.a1
pyrus_communis	pycom13g27740
rosa_chinensis	RchiOBHm_Chr2g0157441 RchiOBHm_Chr4g0407301
rosa_laevigata	RLG00000008734 RLG00000020988
rosa_multiflora	Rmu_sc0001860.1_g000003 Rmu_sc0001860.1_g000004 Rmu_sc0004282.1_g000006 Rmu_sc0004282.1_g000007
rosa_roxburghii	Rroxscaffold_1G00031280 Rroxscaffold_2G00092210 Rroxscaffold_5G00351860 Rroxscaffold_7G00196960
rosa_rugosa	Rorug02G0461300 Rorug04G0078600
rosa_samantha	Rh2AG525600 Rh2BG539900 Rh2CG510200 Rh2DG548700 Rh4AG143300 Rh4BG140900 Rh4CG149700 Rh4DG137200
rosa_wichuraiana	Rw2G043510 Rw4G011650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
Acc36I	ACCTGC	2 cut(s)	511, 2448
Acc65I	GGTACC	1 cut(s)	270
AccB1I	GGYRCC	2 cut(s)	270, 1655
AccB7I	CCANNNNNTGG	1 cut(s)	1444
AccBSI	CCGCTC	1 cut(s)	1563
AccIII	TCCGGA	1 cut(s)	2145
AciI	CCGC	6 cut(s)	73, 79, 210, 1531, 1561, 1758
AclWI	GGATC	8 cut(s)	166, 179, 1055, 1198, 1354, 1646, 2501, 2514
AcoI	YGGCCR	2 cut(s)	141, 1446
AcsI	RAATTY	4 cut(s)	338, 699, 1032, 1214
AcuI	CTGAAG	5 cut(s)	958, 1185, 1307, 1310, 2237
AcyI	GRCGYC	2 cut(s)	11, 2291
AdeI	CACNNNGTG	1 cut(s)	2165
AfaI	GTAC	5 cut(s)	272, 385, 748, 2274, 2526
AflIII	ACRYGT	1 cut(s)	964
AhdI	GACNNNNNGTC	1 cut(s)	2702
AjnI	CCWGG	3 cut(s)	213, 451, 2386
AjuI	GAANNNNNNNTTGG	8 cut(s)	467, 499, 1397, 1429, 2448, 2480, 2734, 2766
Alw21I	GWGCWC	3 cut(s)	150, 2184, 2684
Alw26I	GTCTC	4 cut(s)	171, 972, 2282, 2602
AlwI	GGATC	8 cut(s)	166, 179, 1055, 1198, 1354, 1646, 2501, 2514
AlwNI	CAGNNNCTG	2 cut(s)	1285, 1402
Aor13HI	TCCGGA	1 cut(s)	2145
AoxI	GGCC	5 cut(s)	141, 258, 401, 602, 1446
ApeKI	GCWGC	7 cut(s)	441, 1202, 1279, 1307, 1859, 2519, 2653
ApoI	RAATTY	4 cut(s)	338, 699, 1032, 1214
Asp700I	GAANNNNTTC	1 cut(s)	700
Asp718I	GGTACC	1 cut(s)	270
AspLEI	GCGC	3 cut(s)	819, 1106, 1263
AspS9I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
AsuC2I	CCSGG	4 cut(s)	169, 257, 275, 1660
AsuHPI	GGTGA	8 cut(s)	274, 500, 968, 1393, 1696, 1747, 2591, 2698
AsuII	TTCGAA	2 cut(s)	704, 2235
AvaII	GGWCC	4 cut(s)	217, 253, 1130, 2120
BaeGI	GKGCMC	1 cut(s)	972
BalI	TGGCCA	1 cut(s)	1448
BamHI	GGATCC	2 cut(s)	171, 2506
BanI	GGYRCC	2 cut(s)	270, 1655
BanII	GRGCYC	3 cut(s)	2033, 2184, 2684
BarI	GAAGNNNNNNTAC	2 cut(s)	2532, 2564
BauI	CACGAG	1 cut(s)	2495
Bbv12I	GWGCWC	3 cut(s)	150, 2184, 2684
BbvCI	CCTCAGC	2 cut(s)	121, 1886
BbvI	GCAGC	7 cut(s)	428, 1189, 1291, 1294, 1871, 2506, 2665
BciT130I	CCWGG	3 cut(s)	215, 453, 2388
BciVI	GTATCC	1 cut(s)	2585
BclI	TGATCA	1 cut(s)	1711
BcnI	CCSGG	4 cut(s)	169, 257, 275, 1660
BcoDI	GTCTC	4 cut(s)	171, 972, 2282, 2602
BfaI	CTAG	5 cut(s)	287, 570, 606, 2267, 2782
BfmI	CTRYAG	6 cut(s)	331, 1001, 1176, 1836, 2173, 2520
BfoI	RGCGCY	1 cut(s)	820
BfuAI	ACCTGC	2 cut(s)	511, 2448
BfuI	GTATCC	1 cut(s)	2585
BisI	GCNGC	8 cut(s)	442, 1203, 1280, 1308, 1561, 1860, 2520, 2654
BlsI	GCNGC	8 cut(s)	443, 1204, 1281, 1309, 1562, 1861, 2521, 2655
Bme1390I	CCNGG	7 cut(s)	169, 215, 257, 275, 453, 1660, 2388
Bme18I	GGWCC	4 cut(s)	217, 253, 1130, 2120
BmeRI	GACNNNNNGTC	1 cut(s)	2702
BmgT120I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
BmrFI	CCNGG	7 cut(s)	169, 215, 257, 275, 453, 1660, 2388
BmrI	ACTGGG	2 cut(s)	417, 1776
BmsI	GCATC	5 cut(s)	813, 2237, 2329, 2413, 2768
BmuI	ACTGGG	2 cut(s)	417, 1776
BpmI	CTGGAG	4 cut(s)	68, 1371, 2535, 2708
Bpu10I	CCTNAGC	2 cut(s)	121, 1886
Bpu14I	TTCGAA	2 cut(s)	704, 2235
BpuEI	CTTGAG	3 cut(s)	1549, 2626, 2698
BpuMI	CCSGG	4 cut(s)	169, 257, 275, 1660
BsaBI	GATNNNNATC	1 cut(s)	1637
BsaHI	GRCGYC	2 cut(s)	11, 2291
BsaI	GGTCTC	1 cut(s)	2602
BsaWI	WCCGGW	1 cut(s)	2145
BsaXI	ACNNNNNCTCC	2 cut(s)	2508, 2538
Bse3DI	GCAATG	6 cut(s)	763, 778, 945, 1830, 2581, 2642
Bse8I	GATNNNNATC	1 cut(s)	1637
BseAI	TCCGGA	1 cut(s)	2145
BseBI	CCWGG	3 cut(s)	215, 453, 2388
BseGI	GGATG	6 cut(s)	605, 1024, 1216, 1668, 1714, 1948
BseJI	GATNNNNATC	1 cut(s)	1637
BseMI	GCAATG	6 cut(s)	763, 778, 945, 1830, 2581, 2642
BseMII	CTCAG	3 cut(s)	135, 1900, 2663
BseRI	GAGGAG	5 cut(s)	563, 1445, 1486, 1489, 2658
BseSI	GKGCMC	1 cut(s)	972
BseX3I	CGGCCG	1 cut(s)	141
BseXI	GCAGC	7 cut(s)	428, 1189, 1291, 1294, 1871, 2506, 2665
BseYI	CCCAGC	1 cut(s)	1157
BsgI	GTGCAG	4 cut(s)	365, 539, 1072, 2490
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	143, 260, 403, 604, 1448
BshNI	GGYRCC	2 cut(s)	270, 1655
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	3 cut(s)	150, 2184, 2684
BsiSI	CCGG	6 cut(s)	140, 169, 256, 274, 1659, 2146
BslFI	GGGAC	3 cut(s)	523, 785, 1174
BsmAI	GTCTC	4 cut(s)	171, 972, 2282, 2602
BsmBI	CGTCTC	1 cut(s)	2282
BsmFI	GGGAC	3 cut(s)	523, 785, 1174
BsmI	GAATGC	3 cut(s)	246, 670, 2637
BsnI	GGCC	5 cut(s)	143, 260, 403, 604, 1448
Bso31I	GGTCTC	1 cut(s)	2602
Bsp119I	TTCGAA	2 cut(s)	704, 2235
Bsp1286I	GDGCHC	5 cut(s)	150, 972, 2033, 2184, 2684
Bsp13I	TCCGGA	1 cut(s)	2145
Bsp1407I	TGTACA	1 cut(s)	2272
Bsp19I	CCATGG	2 cut(s)	1206, 1692
BspACI	CCGC	6 cut(s)	73, 79, 210, 1531, 1561, 1758
BspANI	GGCC	5 cut(s)	143, 260, 403, 604, 1448
BspCNI	CTCAG	3 cut(s)	134, 1899, 2662
BspEI	TCCGGA	1 cut(s)	2145
BspHI	TCATGA	1 cut(s)	2050
BspMAI	CTGCAG	2 cut(s)	1180, 2524
BspMI	ACCTGC	2 cut(s)	511, 2448
BspPI	GGATC	8 cut(s)	166, 179, 1055, 1198, 1354, 1646, 2501, 2514
BspT104I	TTCGAA	2 cut(s)	704, 2235
BspT107I	GGYRCC	2 cut(s)	270, 1655
BspTNI	GGTCTC	1 cut(s)	2602
BsrBI	CCGCTC	1 cut(s)	1563
BsrDI	GCAATG	6 cut(s)	763, 778, 945, 1830, 2581, 2642
BsrGI	TGTACA	1 cut(s)	2272
BssNI	GRCGYC	2 cut(s)	11, 2291
BssSI	CACGAG	1 cut(s)	2495
BssT1I	CCWWGG	8 cut(s)	910, 1065, 1206, 1692, 1798, 2034, 2304, 2528
Bst2BI	CACGAG	1 cut(s)	2495
Bst2UI	CCWGG	3 cut(s)	215, 453, 2388
Bst4CI	ACNGT	4 cut(s)	529, 808, 1894, 2770
Bst6I	CTCTTC	3 cut(s)	413, 1293, 1911
BstACI	GRCGYC	2 cut(s)	11, 2291
BstAPI	GCANNNNNTGC	2 cut(s)	665, 1868
BstAUI	TGTACA	1 cut(s)	2272
BstBI	TTCGAA	2 cut(s)	704, 2235
BstC8I	GCNNGC	6 cut(s)	446, 861, 986, 1054, 2428, 2602
BstDEI	CTNAG	8 cut(s)	121, 128, 627, 1886, 2408, 2559, 2649, 2746
BstDSI	CCRYGG	3 cut(s)	1126, 1206, 1692
BstF5I	GGATG	6 cut(s)	605, 1024, 1216, 1668, 1714, 1948
BstH2I	RGCGCY	1 cut(s)	820
BstHHI	GCGC	3 cut(s)	819, 1106, 1263
BstMAI	GTCTC	4 cut(s)	171, 972, 2282, 2602
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	5 cut(s)	665, 823, 994, 1316, 1868
BstNI	CCWGG	3 cut(s)	215, 453, 2388
BstNSI	RCATGY	1 cut(s)	968
BstSCI	CCNGG	7 cut(s)	167, 213, 255, 273, 451, 1658, 2386
BstSFI	CTRYAG	6 cut(s)	331, 1001, 1176, 1836, 2173, 2520
BstSLI	GKGCMC	1 cut(s)	972
BstV1I	GCAGC	7 cut(s)	428, 1189, 1291, 1294, 1871, 2506, 2665
BstX2I	RGATCY	5 cut(s)	171, 1060, 1346, 1638, 2506
BstXI	CCANNNNNNTGG	1 cut(s)	1699
BstYI	RGATCY	5 cut(s)	171, 1060, 1346, 1638, 2506
BstZI	CGGCCG	1 cut(s)	141
BsuI	GTATCC	1 cut(s)	2585
BsuRI	GGCC	5 cut(s)	143, 260, 403, 604, 1448
BtgI	CCRYGG	3 cut(s)	1126, 1206, 1692
BtsCI	GGATG	6 cut(s)	605, 1024, 1216, 1668, 1714, 1948
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	7 cut(s)	813, 1270, 1654, 1890, 2334, 2511, 2684
BveI	ACCTGC	2 cut(s)	511, 2448
Cac8I	GCNNGC	6 cut(s)	446, 861, 986, 1054, 2428, 2602
CaiI	CAGNNNCTG	2 cut(s)	1285, 1402
CciI	TCATGA	1 cut(s)	2050
CfoI	GCGC	3 cut(s)	819, 1106, 1263
Cfr13I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
CseI	GACGC	2 cut(s)	19, 2299
Csp6I	GTAC	5 cut(s)	271, 384, 747, 2273, 2525
CviQI	GTAC	5 cut(s)	271, 384, 747, 2273, 2525
DdeI	CTNAG	8 cut(s)	121, 128, 627, 1886, 2408, 2559, 2649, 2746
DraIII	CACNNNGTG	1 cut(s)	2165
DriI	GACNNNNNGTC	1 cut(s)	2702
EaeI	YGGCCR	2 cut(s)	141, 1446
EagI	CGGCCG	1 cut(s)	141
Eam1104I	CTCTTC	3 cut(s)	413, 1293, 1911
Eam1105I	GACNNNNNGTC	1 cut(s)	2702
EarI	CTCTTC	3 cut(s)	413, 1293, 1911
Ecl136II	GAGCTC	2 cut(s)	2182, 2682
EclXI	CGGCCG	1 cut(s)	141
Eco130I	CCWWGG	8 cut(s)	910, 1065, 1206, 1692, 1798, 2034, 2304, 2528
Eco24I	GRGCYC	3 cut(s)	2033, 2184, 2684
Eco31I	GGTCTC	1 cut(s)	2602
Eco47I	GGWCC	4 cut(s)	217, 253, 1130, 2120
Eco52I	CGGCCG	1 cut(s)	141
Eco53kI	GAGCTC	2 cut(s)	2182, 2682
Eco57I	CTGAAG	5 cut(s)	958, 1185, 1307, 1310, 2237
EcoICRI	GAGCTC	2 cut(s)	2182, 2682
EcoO109I	RGGNCCY	1 cut(s)	217
EcoRII	CCWGG	3 cut(s)	213, 451, 2386
EcoT14I	CCWWGG	8 cut(s)	910, 1065, 1206, 1692, 1798, 2034, 2304, 2528
EcoT38I	GRGCYC	3 cut(s)	2033, 2184, 2684
ErhI	CCWWGG	8 cut(s)	910, 1065, 1206, 1692, 1798, 2034, 2304, 2528
Esp3I	CGTCTC	1 cut(s)	2282
FaqI	GGGAC	3 cut(s)	523, 785, 1174
FauI	CCCGC	3 cut(s)	80, 217, 1751
FbaI	TGATCA	1 cut(s)	1711
Fnu4HI	GCNGC	8 cut(s)	442, 1203, 1280, 1308, 1561, 1860, 2520, 2654
FokI	GGATG	6 cut(s)	612, 1031, 1223, 1675, 1721, 1955
FriOI	GRGCYC	3 cut(s)	2033, 2184, 2684
Fsp4HI	GCNGC	8 cut(s)	442, 1203, 1280, 1308, 1561, 1860, 2520, 2654
FspBI	CTAG	5 cut(s)	287, 570, 606, 2267, 2782
GlaI	GCGC	3 cut(s)	818, 1105, 1262
GluI	GCNGC	8 cut(s)	442, 1203, 1280, 1308, 1561, 1860, 2520, 2654
GsaI	CCCAGC	1 cut(s)	1161
GsuI	CTGGAG	4 cut(s)	68, 1371, 2535, 2708
HaeII	RGCGCY	1 cut(s)	820
HaeIII	GGCC	5 cut(s)	143, 260, 403, 604, 1448
HapII	CCGG	6 cut(s)	140, 169, 256, 274, 1659, 2146
HgaI	GACGC	2 cut(s)	19, 2299
HhaI	GCGC	3 cut(s)	819, 1106, 1263
Hin1I	GRCGYC	2 cut(s)	11, 2291
Hin6I	GCGC	3 cut(s)	817, 1104, 1261
HinP1I	GCGC	3 cut(s)	817, 1104, 1261
HincII	GTYRAC	1 cut(s)	832
HindII	GTYRAC	1 cut(s)	832
HindIII	AAGCTT	4 cut(s)	986, 2447, 2481, 2561
HpaII	CCGG	6 cut(s)	140, 169, 256, 274, 1659, 2146
HphI	GGTGA	8 cut(s)	274, 500, 968, 1393, 1696, 1747, 2591, 2698
Hpy166II	GTNNAC	3 cut(s)	832, 1753, 2275
Hpy188III	TCNNGA	8 cut(s)	91, 681, 794, 1222, 1350, 1715, 2051, 2146
Hpy8I	GTNNAC	3 cut(s)	832, 1753, 2275
Hpy99I	CGWCG	3 cut(s)	13, 158, 317
HpyCH4III	ACNGT	4 cut(s)	529, 808, 1894, 2770
HpyCH4IV	ACGT	2 cut(s)	512, 1927
HpyF10VI	GCNNNNNNNGC	5 cut(s)	665, 823, 994, 1316, 1868
HpyF3I	CTNAG	8 cut(s)	121, 128, 627, 1886, 2408, 2559, 2649, 2746
HpySE526I	ACGT	2 cut(s)	512, 1927
Hsp92I	GRCGYC	2 cut(s)	11, 2291
HspAI	GCGC	3 cut(s)	817, 1104, 1261
Kpn2I	TCCGGA	1 cut(s)	2145
KpnI	GGTACC	1 cut(s)	274
Ksp22I	TGATCA	1 cut(s)	1711
LmnI	GCTCC	9 cut(s)	10, 323, 623, 774, 1258, 1352, 2036, 2516, 2661
Lsp1109I	GCAGC	7 cut(s)	428, 1189, 1291, 1294, 1871, 2506, 2665
LweI	GCATC	5 cut(s)	813, 2237, 2329, 2413, 2768
MaeI	CTAG	5 cut(s)	287, 570, 606, 2267, 2782
MaeII	ACGT	2 cut(s)	512, 1927
MaeIII	GTNAC	4 cut(s)	422, 523, 1762, 2704
MbiI	CCGCTC	1 cut(s)	1563
MflI	RGATCY	5 cut(s)	171, 1060, 1346, 1638, 2506
MhlI	GDGCHC	5 cut(s)	150, 972, 2033, 2184, 2684
MlsI	TGGCCA	1 cut(s)	1448
MluNI	TGGCCA	1 cut(s)	1448
MlyI	GAGTC	6 cut(s)	311, 430, 1001, 1393, 2378, 2659
MmeI	TCCRAC	4 cut(s)	32, 1395, 1407, 1515
Mox20I	TGGCCA	1 cut(s)	1448
MroI	TCCGGA	1 cut(s)	2145
MroXI	GAANNNNTTC	1 cut(s)	700
MscI	TGGCCA	1 cut(s)	1448
MseI	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2723
Msp20I	TGGCCA	1 cut(s)	1448
MspI	CCGG	6 cut(s)	140, 169, 256, 274, 1659, 2146
MspR9I	CCNGG	7 cut(s)	169, 215, 257, 275, 453, 1660, 2388
Mva1269I	GAATGC	3 cut(s)	246, 670, 2637
MvaI	CCWGG	3 cut(s)	215, 453, 2388
MwoI	GCNNNNNNNGC	5 cut(s)	665, 823, 994, 1316, 1868
NciI	CCSGG	4 cut(s)	169, 257, 275, 1660
NcoI	CCATGG	2 cut(s)	1206, 1692
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	3 cut(s)	422, 523, 2704
NspI	RCATGY	1 cut(s)	968
NspV	TTCGAA	2 cut(s)	704, 2235
PagI	TCATGA	1 cut(s)	2050
PciI	ACATGT	1 cut(s)	964
PctI	GAATGC	3 cut(s)	246, 670, 2637
PdmI	GAANNNNTTC	1 cut(s)	700
PflMI	CCANNNNNTGG	1 cut(s)	1444
PkrI	GCNGC	8 cut(s)	443, 1204, 1281, 1309, 1562, 1861, 2521, 2655
PleI	GAGTC	6 cut(s)	310, 429, 1001, 1393, 2377, 2659
PpsI	GAGTC	6 cut(s)	310, 429, 1001, 1393, 2377, 2659
PpuMI	RGGWCCY	1 cut(s)	217
PscI	ACATGT	1 cut(s)	964
PsiI	TTATAA	1 cut(s)	543
Psp124BI	GAGCTC	2 cut(s)	2184, 2684
Psp5II	RGGWCCY	1 cut(s)	217
Psp6I	CCWGG	3 cut(s)	213, 451, 2386
PspFI	CCCAGC	1 cut(s)	1157
PspGI	CCWGG	3 cut(s)	213, 451, 2386
PspPI	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
PspPPI	RGGWCCY	1 cut(s)	217
PsrI	GAACNNNNNNTAC	2 cut(s)	2256, 2288
PstI	CTGCAG	2 cut(s)	1180, 2524
PstNI	CAGNNNCTG	2 cut(s)	1285, 1402
PsuI	RGATCY	5 cut(s)	171, 1060, 1346, 1638, 2506
RsaI	GTAC	5 cut(s)	272, 385, 748, 2274, 2526
RsaNI	GTAC	5 cut(s)	271, 384, 747, 2273, 2525
SacI	GAGCTC	2 cut(s)	2184, 2684
SaqAI	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2723
SatI	GCNGC	8 cut(s)	442, 1203, 1280, 1308, 1561, 1860, 2520, 2654
Sau96I	GGNCC	6 cut(s)	217, 253, 258, 401, 1130, 2120
SchI	GAGTC	6 cut(s)	311, 430, 1001, 1393, 2378, 2659
ScrFI	CCNGG	7 cut(s)	169, 215, 257, 275, 453, 1660, 2388
SduI	GDGCHC	5 cut(s)	150, 972, 2033, 2184, 2684
SfaNI	GCATC	5 cut(s)	813, 2237, 2329, 2413, 2768
SfcI	CTRYAG	6 cut(s)	331, 1001, 1176, 1836, 2173, 2520
SfuI	TTCGAA	2 cut(s)	704, 2235
SinI	GGWCC	4 cut(s)	217, 253, 1130, 2120
SmlI	CTYRAG	3 cut(s)	1564, 2605, 2677
SmoI	CTYRAG	3 cut(s)	1564, 2605, 2677
SsiI	CCGC	6 cut(s)	73, 79, 210, 1531, 1561, 1758
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	5 cut(s)	287, 570, 606, 2267, 2782
SstI	GAGCTC	2 cut(s)	2184, 2684
StyD4I	CCNGG	7 cut(s)	167, 213, 255, 273, 451, 1658, 2386
StyI	CCWWGG	8 cut(s)	910, 1065, 1206, 1692, 1798, 2034, 2304, 2528
TaaI	ACNGT	4 cut(s)	529, 808, 1894, 2770
TaiI	ACGT	2 cut(s)	515, 1930
TaqI	TCGA	5 cut(s)	156, 350, 704, 1193, 2235
TatI	WGTACW	2 cut(s)	383, 2272
TauI	GCSGC	1 cut(s)	1563
Tru1I	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2723
Tru9I	TTAA	5 cut(s)	741, 1037, 1146, 1823, 2723
TscAI	CASTG	7 cut(s)	813, 1270, 1654, 1897, 2341, 2518, 2691
TseFI	GTSAC	3 cut(s)	422, 523, 2704
TseI	GCWGC	7 cut(s)	441, 1202, 1279, 1307, 1859, 2519, 2653
Tsp45I	GTSAC	3 cut(s)	422, 523, 2704
TspDTI	ATGAA	8 cut(s)	702, 774, 1161, 1227, 1401, 1682, 2262, 2386
TspGWI	ACGGA	1 cut(s)	1115
TspRI	CASTG	7 cut(s)	813, 1270, 1654, 1897, 2341, 2518, 2691
Van91I	CCANNNNNTGG	1 cut(s)	1444
VpaK11BI	GGWCC	4 cut(s)	217, 253, 1130, 2120
XapI	RAATTY	4 cut(s)	338, 699, 1032, 1214
XceI	RCATGY	1 cut(s)	968
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1630, 2327, 2593
XmnI	GAANNNNTTC	1 cut(s)	700
XspI	CTAG	5 cut(s)	287, 570, 606, 2267, 2782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.