Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006735

Physical Location & Seq

Genomic Coordinates Forward (+)

6165440 .. 6167515

Gene Structure 2076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G18020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGTTCTTCGTCACTCGTCTGCGACTACGAGCCAGAGAAAATGGCTTCTTCTTCTCTAAATCCCTCTCTTTCTCATCTGCCTCCGTATTGAAATCTGATGATGTCGAAGGAGAAGATGATGCAATAGAAGCAGAAGATCGTCGACGCAGTGTAACCGATAGAGCTTACTGGAGAAGACGGATACACAGTATCTGCGCCGTACGGAGGAATCCTGACGAAGCTCTTCGGATTCTAGACGGACTCTGCCTCCGTGGGTATCGTCCTGATTCGCTTAACCTCAGCAGTGTGATCCACTCTCTTTGTGACGCCGGACGATTTGACGAAGCTCACCGTCGGTTTTTACTCTTCCTCGCTTCAGGTTTTATCCCAGACGAGCGAACCTGCAACGTTATCATCGCAAGATTGTTATATTCGAGATCTCCGGTGAGTACGTTGGGAGTTATACACCGTTTGATCGGTTTCAAGAAGGAGTTTGTGCCATCGTTGACGAATTACAACCGTTTGATGAATCAGTTGTGTACGATCTATAGAGTAATCGATGCGCATAAGCTAGTATTCGATATGAGAAACAGAGGGCATCTCCCAGATGTTGTGACTTTCACAACTTTAATCGGTGGTTACTGTGAGATTCGAGAACTGGAAGTTGCTCATAAAGTGTTCGACGAAATGCGTGTGTGTGGCATAAGGCCTAATTCTCTCACATTGAGTGTTCTTATTGGTGGGTTTTTGAAAATGAGAGATGTTGAAACAGGACGGAAGCTGATGAAGGAACTATGGGAATACATGAAGAATGAGACTGATACATCAATGAAAGCAGCAGCTTTTGCGAATCTCGTTGATTCTATGTGCAGGGAAGGGTATTTCAATGATATTTTTGAGATTGCAGAGAACATGTCACTATGCGAGTCTGTGAACGTTGAATTTGCTTACGGGCATATGATAGATTCCTTGTGTCGATACAGGAGAAACCATGGAGCAGCGAGGATTGTTTATATAATGAAGAGTAAAGGGTTAAAACCGAGAAGAACGTCATACAATGCTATAATTCATGGCTTGTGCAAGGATGGTGGGTGTATGAGGGCTTATCAGTTGCTAGAAGAGGGATCTGAATTTGAGTTTTTTCCGTCTGAGTATACTTATAAGCTCCTAATGGAGAGTCTATGCAAGGAACTGGACACGGGTAAAGCCAGGAATGTTCTAGAGCTGATGTTGAGAAAAGAAGGAGCAGATAGAACTCGAATCTATAATATTTATCTACGCGGTCTCTGCGTGATGGATAACCCGACTGAGATCCTGAACGTACTGGTCAGTATGCTTCAGGGAGACTGCAGGCCTGATGAGTATACACTTAACACAGTTATTAATGGATTATGCAAGATGGGCAGGGTGGACGATGCCATGAAAGTTCTTGATGATATGATGACAGGGAAGTTCTGTGCACCAGATGCTGTGACTTTAAATACTGTTATGTGTGGCTTGCTCGCTCAAGGAAGAGCAGAAGAAGCTCTGGATGTGTTGAATCGCGTTATGCCGGAGAACAAGATTAAGCCAGGTGTTGTTGCATACAATGCTGTTATACGTGGGTTGTTCAAGCTCCACAAGGGAGATGAAGCTATGTCTGTGTTTGGTCAGCTGGAAAAGGCGAGTGTGACTGCGGATAGCACTACATATGCAATAATCATTGACGGGTTGTGTGTGACTAATAAGGTGGATATGGCGAAGAAGTTCTGGGATGATGTGATATGGCCATCAGGCAGACATGATGCGTTTGTGTATGCAGCATTTCTGAAAGGGCTTTGTCAGTCTGGTTATCTAAGTGATGCTTGCCATTTCCTATATGACCTGGCAGATTCTGGAGCAATCCCTAATGTTGTGTGCTATAATACTGTGATTGCTGAGTGTAGCAGAAGTGGGTTAAAGAGAGAAGCGTACCAGATTTTGGAGGAGATGAGGAAGAACGGTCAGGCTCCTGATGCTGTTACATGGCGGATACTCGATAAACTACATGATTCTATGGATCTAACTGTGGAAAGAGAGTTAATTTCAAACCCTGCAACCTCAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

688

Amino Acids

77.97

Weight (kDa)

6.91

Isoelectric Point (pI)

34.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	161 - 208	5.9e-10	PPR repeat family
PPR_3	PF13812	184 - 242	8.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	191 - 224	1.6e-10	PPR repeat
PPR_2	PF13041	195 - 244	8.1e-15	PPR repeat family
PPR	PF01535	198 - 228	3.3e-06	PPR repeat
PPR_2	PF13041	308 - 354	8.8e-07	PPR repeat family
PPR_1	PF12854	336 - 367	4.4e-06	PPR repeat
PPR_2	PF13041	344 - 389	1.9e-07	PPR repeat family
PPR_2	PF13041	414 - 459	4.8e-09	PPR repeat family
PPR_1	PF12854	442 - 473	2.5e-13	PPR repeat
PPR	PF01535	448 - 474	2e-06	PPR repeat
PPR_2	PF13041	517 - 565	2.6e-12	PPR repeat family
PPR_2	PF13041	622 - 665	1.4e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006735)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18020
fragaria_vesca	FvH4_5g17250
malus_domestica	MD06G1231100.v1.1
prunus_persica	Prupe.5G232400_v2.0.a1
pyrus_communis	pycom06g20240
rosa_chinensis	RchiOBHm_Chr7g0178541
rosa_laevigata	RLG00000005439 RLG00000010173
rosa_multiflora	Rmu_sc0000775.1_g000015 Rmu_sc0000961.1_g000015 Rmu_sc0002421.1_g000004 Rmu_sc0003637.1_g000006 Rmu_sc0011483.1_g000001 Rmu_sc0016060.1_g000005 Rmu_ssc0000343.1_g000033
rosa_roxburghii	Rroxscaffold_3G00274830 Rroxscaffold_5G00333820
rosa_rugosa	Rorug06G0417900
rosa_samantha	Rh3CG367500 Rh4AG426400 Rh4DG434700 Rh7AG016400 Rh7BG015900 Rh7CG016600 Rh7DG016500
rosa_wichuraiana	Rw7G001300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1140
Acc16I	TGCGCA	1 cut(s)	543
Acc36I	ACCTGC	1 cut(s)	389
AccB7I	CCANNNNNTGG	1 cut(s)	1939
AccI	GTMKAC	3 cut(s)	142, 1133, 1343
AccII	CGCG	2 cut(s)	1260, 1524
AciI	CCGC	3 cut(s)	1260, 1655, 1987
AclI	AACGTT	2 cut(s)	387, 915
AclWI	GGATC	4 cut(s)	283, 1111, 1285, 2025
AcoI	YGGCCR	1 cut(s)	1745
AcsI	RAATTY	2 cut(s)	920, 1109
AcuI	CTGAAG	2 cut(s)	339, 1301
AcyI	GRCGYC	1 cut(s)	306
AfaI	GTAC	5 cut(s)	201, 430, 520, 1302, 1931
AfiI	CCNNNNNNNGG	2 cut(s)	204, 1939
AflIII	ACRYGT	1 cut(s)	891
AgsI	TTSAA	9 cut(s)	91, 463, 730, 746, 865, 920, 1519, 1591, 2046
AjnI	CCWGG	3 cut(s)	1187, 1549, 1842
Alw21I	GWGCWC	1 cut(s)	1441
Alw26I	GTCTC	3 cut(s)	788, 1268, 1317
Alw44I	GTGCAC	1 cut(s)	1437
AlwI	GGATC	4 cut(s)	283, 1111, 1285, 2025
AlwNI	CAGNNNCTG	3 cut(s)	192, 1448, 1853
AoxI	GGCC	3 cut(s)	686, 1331, 1745
ApaLI	GTGCAC	1 cut(s)	1437
ApeKI	GCWGC	4 cut(s)	815, 818, 977, 1778
ApoI	RAATTY	2 cut(s)	920, 1109
AseI	ATTAAT	1 cut(s)	1362
Asp700I	GAANNNNTTC	2 cut(s)	222, 1724
AspLEI	GCGC	2 cut(s)	197, 544
AsuHPI	GGTGA	2 cut(s)	320, 436
AxyI	CCTNAGG	1 cut(s)	2059
BaeGI	GKGCMC	1 cut(s)	1441
BalI	TGGCCA	1 cut(s)	1747
BbsI	GAAGAC	1 cut(s)	181
Bbv12I	GWGCWC	1 cut(s)	1441
BbvCI	CCTCAGC	1 cut(s)	278
BbvI	GCAGC	4 cut(s)	827, 830, 989, 1790
BccI	CCATC	5 cut(s)	487, 1058, 1267, 1372, 1756
BceAI	ACGGC	1 cut(s)	182
BciT130I	CCWGG	3 cut(s)	1189, 1551, 1844
BciVI	GTATCC	2 cut(s)	174, 1983
BcoDI	GTCTC	3 cut(s)	788, 1268, 1317
BfaI	CTAG	4 cut(s)	233, 551, 1094, 1199
BfmI	CTRYAG	2 cut(s)	526, 1327
BfuAI	ACCTGC	1 cut(s)	389
BfuI	GTATCC	2 cut(s)	174, 1983
BglII	AGATCT	1 cut(s)	416
BisI	GCNGC	4 cut(s)	816, 819, 978, 1779
BlsI	GCNGC	4 cut(s)	817, 820, 979, 1780
Bme1390I	CCNGG	3 cut(s)	1189, 1551, 1844
BmiI	GGNNCC	1 cut(s)	1968
BmrFI	CCNGG	3 cut(s)	1189, 1551, 1844
BmsI	GCATC	8 cut(s)	109, 529, 586, 1384, 1435, 1753, 1810, 1963
BpiI	GAAGAC	1 cut(s)	181
BplI	GAGNNNNNCTC	2 cut(s)	564, 596
BpmI	CTGGAG	2 cut(s)	190, 1875
Bpu10I	CCTNAGC	1 cut(s)	278
BpuEI	CTTGAG	1 cut(s)	1470
Bsa29I	ATCGAT	1 cut(s)	537
BsaAI	YACGTR	1 cut(s)	1580
BsaHI	GRCGYC	1 cut(s)	306
BsaI	GGTCTC	1 cut(s)	1268
BsaJI	CCNNGG	2 cut(s)	250, 970
BsaWI	WCCGGW	1 cut(s)	421
BsaXI	ACNNNNNCTCC	2 cut(s)	231, 261
Bsc4I	CCNNNNNNNGG	2 cut(s)	204, 1939
Bse1I	ACTGG	4 cut(s)	173, 642, 1176, 1308
Bse21I	CCTNAGG	1 cut(s)	2059
BseBI	CCWGG	3 cut(s)	1189, 1551, 1844
BseCI	ATCGAT	1 cut(s)	537
BseDI	CCNNGG	2 cut(s)	250, 970
BseGI	GGATG	3 cut(s)	1069, 1516, 1738
BseLI	CCNNNNNNNGG	2 cut(s)	204, 1939
BseMII	CTCAG	4 cut(s)	292, 1119, 1278, 1887
BseNI	ACTGG	4 cut(s)	173, 642, 1176, 1308
BseRI	GAGGAG	1 cut(s)	1958
BseSI	GKGCMC	1 cut(s)	1441
BseXI	GCAGC	4 cut(s)	827, 830, 989, 1790
BsgI	GTGCAG	1 cut(s)	868
Bsh1236I	CGCG	2 cut(s)	1260, 1524
BshFI	GGCC	3 cut(s)	688, 1333, 1747
BshVI	ATCGAT	1 cut(s)	537
BsiHKAI	GWGCWC	1 cut(s)	1441
BsiSI	CCGG	3 cut(s)	309, 422, 1532
BsiWI	CGTACG	1 cut(s)	199
BslI	CCNNNNNNNGG	2 cut(s)	204, 1939
BsmAI	GTCTC	3 cut(s)	788, 1268, 1317
BsnI	GGCC	3 cut(s)	688, 1333, 1747
Bso31I	GGTCTC	1 cut(s)	1268
Bsp1286I	GDGCHC	1 cut(s)	1441
Bsp143I	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
Bsp19I	CCATGG	1 cut(s)	970
BspACI	CCGC	3 cut(s)	1260, 1655, 1987
BspANI	GGCC	3 cut(s)	688, 1333, 1747
BspCNI	CTCAG	4 cut(s)	291, 1120, 1279, 1888
BspDI	ATCGAT	1 cut(s)	537
BspFNI	CGCG	2 cut(s)	1260, 1524
BspLI	GGNNCC	1 cut(s)	1968
BspMAI	CTGCAG	1 cut(s)	1331
BspMI	ACCTGC	1 cut(s)	389
BspPI	GGATC	4 cut(s)	283, 1111, 1285, 2025
BspQI	GCTCTTC	2 cut(s)	228, 1486
BspTNI	GGTCTC	1 cut(s)	1268
BsrI	ACTGG	4 cut(s)	173, 642, 1176, 1308
BssECI	CCNNGG	2 cut(s)	250, 970
BssMI	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
BssNAI	GTATAC	2 cut(s)	1134, 1344
BssNI	GRCGYC	1 cut(s)	306
BssT1I	CCWWGG	1 cut(s)	970
Bst1107I	GTATAC	2 cut(s)	1134, 1344
Bst2UI	CCWGG	3 cut(s)	1189, 1551, 1844
Bst6I	CTCTTC	5 cut(s)	228, 350, 995, 1092, 1486
BstACI	GRCGYC	1 cut(s)	306
BstAPI	GCANNNNNTGC	3 cut(s)	824, 1445, 1568
BstBAI	YACGTR	1 cut(s)	1580
BstC8I	GCNNGC	4 cut(s)	1331, 1478, 1482, 1825
BstDEI	CTNAG	6 cut(s)	278, 1128, 1287, 1814, 1896, 2059
BstDSI	CCRYGG	2 cut(s)	250, 970
BstF5I	GGATG	3 cut(s)	1069, 1516, 1738
BstFNI	CGCG	2 cut(s)	1260, 1524
BstHHI	GCGC	2 cut(s)	197, 544
BstKTI	GATC	8 cut(s)	139, 291, 419, 456, 525, 1106, 1293, 2020
BstMAI	GTCTC	3 cut(s)	788, 1268, 1317
BstMBI	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
BstMWI	GCNNNNNNNGC	8 cut(s)	128, 824, 1266, 1380, 1445, 1502, 1568, 1973
BstNI	CCWGG	3 cut(s)	1189, 1551, 1844
BstNSI	RCATGY	1 cut(s)	895
BstSCI	CCNGG	3 cut(s)	1187, 1549, 1842
BstSFI	CTRYAG	2 cut(s)	526, 1327
BstSLI	GKGCMC	1 cut(s)	1441
BstUI	CGCG	2 cut(s)	1260, 1524
BstV1I	GCAGC	4 cut(s)	827, 830, 989, 1790
BstV2I	GAAGAC	1 cut(s)	181
BstX2I	RGATCY	4 cut(s)	416, 1103, 1290, 2017
BstYI	RGATCY	4 cut(s)	416, 1103, 1290, 2017
BstZ17I	GTATAC	2 cut(s)	1134, 1344
Bsu15I	ATCGAT	1 cut(s)	537
Bsu36I	CCTNAGG	1 cut(s)	2059
BsuI	GTATCC	2 cut(s)	174, 1983
BsuRI	GGCC	3 cut(s)	688, 1333, 1747
BsuTUI	ATCGAT	1 cut(s)	537
BtgI	CCRYGG	2 cut(s)	250, 970
BtgZI	GCGATG	1 cut(s)	379
BtsCI	GGATG	3 cut(s)	1069, 1516, 1738
BtsI	GCAGTG	2 cut(s)	154, 289
BtsIMutI	CAGTG	2 cut(s)	154, 289
BveI	ACCTGC	1 cut(s)	389
Cac8I	GCNNGC	4 cut(s)	1331, 1478, 1482, 1825
CaiI	CAGNNNCTG	3 cut(s)	192, 1448, 1853
CfoI	GCGC	2 cut(s)	197, 544
ClaI	ATCGAT	1 cut(s)	537
CseI	GACGC	2 cut(s)	153, 314
Csp6I	GTAC	5 cut(s)	200, 429, 519, 1301, 1930
CspCI	CAANNNNNGTGG	4 cut(s)	281, 316, 1048, 1083
CviAII	CATG	8 cut(s)	784, 892, 971, 1049, 1399, 1760, 1983, 2006
CviQI	GTAC	5 cut(s)	200, 429, 519, 1301, 1930
DdeI	CTNAG	6 cut(s)	278, 1128, 1287, 1814, 1896, 2059
DpnI	GATC	8 cut(s)	138, 290, 418, 455, 524, 1105, 1292, 2019
DpnII	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
DraI	TTTAAA	1 cut(s)	1458
EaeI	YGGCCR	1 cut(s)	1745
Eam1104I	CTCTTC	5 cut(s)	228, 350, 995, 1092, 1486
EarI	CTCTTC	5 cut(s)	228, 350, 995, 1092, 1486
EciI	GGCGGA	1 cut(s)	2002
Eco130I	CCWWGG	1 cut(s)	970
Eco147I	AGGCCT	2 cut(s)	688, 1333
Eco31I	GGTCTC	1 cut(s)	1268
Eco57I	CTGAAG	2 cut(s)	339, 1301
Eco81I	CCTNAGG	1 cut(s)	2059
EcoRII	CCWGG	3 cut(s)	1187, 1549, 1842
EcoT14I	CCWWGG	1 cut(s)	970
ErhI	CCWWGG	1 cut(s)	970
FaeI	CATG	8 cut(s)	787, 895, 974, 1052, 1402, 1763, 1986, 2009
FalI	AAGNNNNNCTT	2 cut(s)	1807, 1839
FatI	CATG	8 cut(s)	783, 891, 970, 1048, 1398, 1759, 1982, 2005
FauNDI	CATATG	2 cut(s)	936, 1669
FblI	GTMKAC	3 cut(s)	142, 1133, 1343
Fnu4HI	GCNGC	4 cut(s)	816, 819, 978, 1779
FokI	GGATG	3 cut(s)	1076, 1523, 1745
Fsp4HI	GCNGC	4 cut(s)	816, 819, 978, 1779
FspAI	RTGCGCAY	1 cut(s)	543
FspBI	CTAG	4 cut(s)	233, 551, 1094, 1199
FspI	TGCGCA	1 cut(s)	543
GlaI	GCGC	2 cut(s)	196, 543
GluI	GCNGC	4 cut(s)	816, 819, 978, 1779
GsuI	CTGGAG	2 cut(s)	190, 1875
HaeIII	GGCC	3 cut(s)	688, 1333, 1747
HapII	CCGG	3 cut(s)	309, 422, 1532
HgaI	GACGC	2 cut(s)	153, 314
HhaI	GCGC	2 cut(s)	197, 544
Hin1I	GRCGYC	1 cut(s)	306
Hin1II	CATG	8 cut(s)	787, 895, 974, 1052, 1402, 1763, 1986, 2009
Hin6I	GCGC	2 cut(s)	195, 542
HinP1I	GCGC	2 cut(s)	195, 542
HincII	GTYRAC	2 cut(s)	143, 486
HindII	GTYRAC	2 cut(s)	143, 486
HpaII	CCGG	3 cut(s)	309, 422, 1532
HphI	GGTGA	2 cut(s)	320, 436
Hpy166II	GTNNAC	8 cut(s)	143, 486, 519, 913, 1134, 1344, 1390, 1439
Hpy188I	TCNGA	5 cut(s)	97, 228, 1108, 1129, 1788
Hpy8I	GTNNAC	8 cut(s)	143, 486, 519, 913, 1134, 1344, 1390, 1439
Hpy99I	CGWCG	4 cut(s)	144, 147, 336, 665
HpyAV	CCTTC	5 cut(s)	101, 460, 760, 848, 1214
HpyCH4IV	ACGT	6 cut(s)	387, 431, 915, 1028, 1299, 1579
HpyF10VI	GCNNNNNNNGC	8 cut(s)	128, 824, 1266, 1380, 1445, 1502, 1568, 1973
HpyF3I	CTNAG	6 cut(s)	278, 1128, 1287, 1814, 1896, 2059
HpySE526I	ACGT	6 cut(s)	387, 431, 915, 1028, 1299, 1579
Hsp92I	GRCGYC	1 cut(s)	306
Hsp92II	CATG	8 cut(s)	787, 895, 974, 1052, 1402, 1763, 1986, 2009
HspAI	GCGC	2 cut(s)	195, 542
Kzo9I	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
LguI	GCTCTTC	2 cut(s)	228, 1486
LmnI	GCTCC	6 cut(s)	974, 1149, 1223, 1599, 1856, 1972
Lsp1109I	GCAGC	4 cut(s)	827, 830, 989, 1790
LweI	GCATC	8 cut(s)	109, 529, 586, 1384, 1435, 1753, 1810, 1963
MaeI	CTAG	4 cut(s)	233, 551, 1094, 1199
MaeII	ACGT	6 cut(s)	387, 431, 915, 1028, 1299, 1579
MalI	GATC	8 cut(s)	138, 290, 418, 455, 524, 1105, 1292, 2019
MboI	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
MflI	RGATCY	4 cut(s)	416, 1103, 1290, 2017
MhlI	GDGCHC	1 cut(s)	1441
MlsI	TGGCCA	1 cut(s)	1747
MluCI	AATT	6 cut(s)	490, 691, 920, 1044, 1109, 2040
MluNI	TGGCCA	1 cut(s)	1747
MlyI	GAGTC	3 cut(s)	234, 914, 1165
Mox20I	TGGCCA	1 cut(s)	1747
MroXI	GAANNNNTTC	2 cut(s)	222, 1724
MscI	TGGCCA	1 cut(s)	1747
MseI	TTAA	9 cut(s)	273, 608, 1013, 1350, 1362, 1457, 1545, 1916, 2039
Msp20I	TGGCCA	1 cut(s)	1747
MspA1I	CMGCKG	1 cut(s)	1633
MspI	CCGG	3 cut(s)	309, 422, 1532
MspR9I	CCNGG	3 cut(s)	1189, 1551, 1844
MvaI	CCWGG	3 cut(s)	1189, 1551, 1844
MvnI	CGCG	2 cut(s)	1260, 1524
MwoI	GCNNNNNNNGC	8 cut(s)	128, 824, 1266, 1380, 1445, 1502, 1568, 1973
NcoI	CCATGG	1 cut(s)	970
NdeI	CATATG	2 cut(s)	936, 1669
NdeII	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
NlaIII	CATG	8 cut(s)	787, 895, 974, 1052, 1402, 1763, 1986, 2009
NlaIV	GGNNCC	1 cut(s)	1968
NmuCI	GTSAC	7 cut(s)	10, 302, 592, 894, 1450, 1648, 1696
NsbI	TGCGCA	1 cut(s)	543
NspI	RCATGY	1 cut(s)	895
PceI	AGGCCT	2 cut(s)	688, 1333
PciI	ACATGT	1 cut(s)	891
PciSI	GCTCTTC	2 cut(s)	228, 1486
PdmI	GAANNNNTTC	2 cut(s)	222, 1724
Pfl23II	CGTACG	1 cut(s)	199
PflMI	CCANNNNNTGG	1 cut(s)	1939
PkrI	GCNGC	4 cut(s)	817, 820, 979, 1780
PleI	GAGTC	3 cut(s)	234, 913, 1164
PpsI	GAGTC	3 cut(s)	234, 913, 1164
Ppu21I	YACGTR	1 cut(s)	1580
PscI	ACATGT	1 cut(s)	891
PshBI	ATTAAT	1 cut(s)	1362
PsiI	TTATAA	1 cut(s)	1140
Psp1406I	AACGTT	2 cut(s)	387, 915
Psp6I	CCWGG	3 cut(s)	1187, 1549, 1842
PspGI	CCWGG	3 cut(s)	1187, 1549, 1842
PspLI	CGTACG	1 cut(s)	199
PspN4I	GGNNCC	1 cut(s)	1968
PstI	CTGCAG	1 cut(s)	1331
PstNI	CAGNNNCTG	3 cut(s)	192, 1448, 1853
PsuI	RGATCY	4 cut(s)	416, 1103, 1290, 2017
PvuII	CAGCTG	1 cut(s)	1633
RsaI	GTAC	5 cut(s)	201, 430, 520, 1302, 1931
RsaNI	GTAC	5 cut(s)	200, 429, 519, 1301, 1930
SalI	GTCGAC	1 cut(s)	141
SapI	GCTCTTC	2 cut(s)	228, 1486
SaqAI	TTAA	9 cut(s)	273, 608, 1013, 1350, 1362, 1457, 1545, 1916, 2039
SatI	GCNGC	4 cut(s)	816, 819, 978, 1779
Sau3AI	GATC	8 cut(s)	136, 288, 416, 453, 522, 1103, 1290, 2017
SchI	GAGTC	3 cut(s)	234, 914, 1165
ScrFI	CCNGG	3 cut(s)	1189, 1551, 1844
SduI	GDGCHC	1 cut(s)	1441
SfaNI	GCATC	8 cut(s)	109, 529, 586, 1384, 1435, 1753, 1810, 1963
SfcI	CTRYAG	2 cut(s)	526, 1327
SgrDI	CGTCGACG	1 cut(s)	141
SmlI	CTYRAG	1 cut(s)	1485
SmoI	CTYRAG	1 cut(s)	1485
Sse9I	AATT	6 cut(s)	490, 691, 920, 1044, 1109, 2040
SseBI	AGGCCT	2 cut(s)	688, 1333
SsiI	CCGC	3 cut(s)	1260, 1655, 1987
SspI	AATATT	1 cut(s)	1249
SspMI	CTAG	4 cut(s)	233, 551, 1094, 1199
StuI	AGGCCT	2 cut(s)	688, 1333
StyD4I	CCNGG	3 cut(s)	1187, 1549, 1842
StyI	CCWWGG	1 cut(s)	970
TaiI	ACGT	6 cut(s)	390, 434, 918, 1031, 1302, 1582
TasI	AATT	6 cut(s)	490, 691, 920, 1044, 1109, 2040
Tru1I	TTAA	9 cut(s)	273, 608, 1013, 1350, 1362, 1457, 1545, 1916, 2039
Tru9I	TTAA	9 cut(s)	273, 608, 1013, 1350, 1362, 1457, 1545, 1916, 2039
TscAI	CASTG	2 cut(s)	154, 289
TseFI	GTSAC	7 cut(s)	10, 302, 592, 894, 1450, 1648, 1696
TseI	GCWGC	4 cut(s)	815, 818, 977, 1778
Tsp45I	GTSAC	7 cut(s)	10, 302, 592, 894, 1450, 1648, 1696
TspDTI	ATGAA	8 cut(s)	521, 779, 800, 824, 1013, 1037, 1415, 1623
TspGWI	ACGGA	7 cut(s)	73, 193, 217, 239, 252, 769, 1113
TspRI	CASTG	2 cut(s)	154, 289
Van91I	CCANNNNNTGG	1 cut(s)	1939
VneI	GTGCAC	1 cut(s)	1437
VspI	ATTAAT	1 cut(s)	1362
XapI	RAATTY	2 cut(s)	920, 1109
XbaI	TCTAGA	2 cut(s)	232, 1198
XceI	RCATGY	1 cut(s)	895
XmiI	GTMKAC	3 cut(s)	142, 1133, 1343
XmnI	GAANNNNTTC	2 cut(s)	222, 1724
XspI	CTAG	4 cut(s)	233, 551, 1094, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.