Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002080

Physical Location & Seq

Genomic Coordinates Forward (+)

167497 .. 171010

Gene Structure 3514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G00380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGACATTTCTGATGAAGAGTCTGAGATCAGCGAGTCAGAGATTGAGGAGTATTCTAAAACACCCTACCACCTTTTACGCAGTGAGACTTACTACAAGGTGAAGGTGAATGGACGGCTCAGATGCCCCTTTTGTGTAGGCAAGAAGAAGCAAGATTACAAGTACAAGGAGTTGCATGCACATGCTACTGGTGTTTCCAAAGGTTCTGCCACCAGAAGTGCTTTACAGAAGTCTAATCATCTTGCTTTAGCTAAGTTTTTAGAGAATGATCTTGCTGGTTATGCAGAACCTCTTCCACGCCCTCCGGTTGTTCCTCCTCTGTTAGACGAGACTGAACCAAATCCTCATAACGTCTATGTCTGGCCATGGATGGGGATTGTTGTTAACCCTTTGAAAGAAACGGATGACAAGGAGCTTCTACTTGATTCAGTATATTGGCTGCAGACCCTTTCCAAATTCAAGCCTGTTGAAGTGAATGCCTTTTGGGTCGAACAAGATTCGATTGTTGGGGTTATTGCTAAGTTTGACAGTGACTGGAGTGGGTTTGCTGCTGCCACAGAGCTTGAAAAGGAATTTGAGACCCAAGGGTCCTGCAAAAAAGAGTGGACTGAGAGGAGTGGAGATTCAGAGTCAAAGGCTTATGGTTGGTGTGCACGTGCAGACGACTTTCAATCTCAAGGTCCAATAGGTGAGTACCTCTCCAAGGAGGGAACGCTAAGAACAGTTTCAGATATTTTGCAAAACAATGTGCAGGATAGAAACACTCTTCTGGACGTACTTTCAAATATGATTGATATGACAAACGAAGATCTGAACAAGGCCCAACACAGTTACAACAGGACGGCAATGTCACTGCAAAGGGTCCTAGATGAGAAAAAAAACTTGCACCAAGCTTTTGCTGAAGAAACAAAGAAGATGCAGCAGATGTCACTTCGCCATATCCAGAGAATCCTATATGATAAAGAGAAGCTAAGAAATGAACTGGATCGTAAGATGCGGGACTTGGAGTCTCGGGCCAAACAATTGGAAAAACATGAAGCACTAACTGAACTGGAGAGGCAAAAGCTTGATGAAGACAAGAGAAAGAGTGATGCTATGAACAAATCCCTACAGTTAGCCTCACGTGAGCAGAAAAAGGCTGACGAAAGCGTCTTGAGACTTGTAGAAGAACATCAGAGGCAAAAAGAAGATGCTTTGAACAAGATCCTTCTGCTTGAGAAGCAGCTAGACACCAAACAGACACTGGAAATGGAGATTCAAGAGCTAAAAGGCAAATTACAAGTGATGAAGCATCTGGGGGATGATGATGATGAGGCGGTCCAGACGAAAATGAAAGAGATGAATGATGAGCTGGATGACAAGAAAGCTGAGTTAGAAGATCTAGAAAGTATGAACTCAGTCCTGATGACAAAAGAACGCCAAAGCAATGATGAGATACAAGCAGCGCGGCAAAAAATGATTGCGGGTTTGACAGGATTGTTGGGTGCCGAGAGCGATATCGGAGTAAAAAGGATGGGAGAACTTGATGAGAAACCTTTCCTGGATGTTTGCAAGCTGAGATATTCTGCAAATGAAGCTAGGGTTGAAGCTGCCACCCTTTGCTCTACATGGAAGGAGAACCTTAAGAATCCATCATGGCAACCATTCAAGCGTGAAGGAACCGGGGACGGAGCAGAGGAAGTGGTAGACGAGGATGATGAGCAGCTGAAGAAGCTTAAAAGAGAGTGGGGAAAAGAGGTGCATAACGCAGTAAAAGCAGCTCTTGTGGAGATGAATGAGTATAATGCAAGTGGTCGGTACCCGACTTCAGAACTGTGGAACTTCAAAGAAGGAAGAAAAGCCACTCTCAAGGAAGTGATTACGTTCATTTCAACCGACATAAAAAATCTGAAACGCAAAAGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003725 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005655 GO:0005730 GO:0005911 GO:0006139 GO:0006259 GO:0006282 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009892 GO:0009987 GO:0010468 GO:0010569 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019219 GO:0019222 GO:0030054 GO:0030677 GO:0030681 GO:0031047 GO:0031323 GO:0031974 GO:0031981 GO:0032259 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0055044 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0080188 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1902555 GO:1905348 GO:1990904 GO:2000779 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XH XS zf-XS

Protein Analysis

635

Amino Acids

73.16

Weight (kDa)

5.39

Isoelectric Point (pI)

44.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-XS	PF03470	42 - 84	1.4e-19	XS zinc finger domain
XS	PF03468	117 - 224	1.1e-32	XS domain
XH	PF03469	503 - 633	6.7e-55	XH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15910 AT4G00380 AT4G00380 AT4G00380
fragaria_vesca	FvH4_6g28780 FvH4_6g28780 FvH4_6g28780 FvH4_6g28780
malus_domestica	MD09G1224300.v1.1 MD17G1221900.v1.1 MD17G1222100.v1.1
prunus_persica	Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133161 RchiOBHm_Chr2g0133201 RchiOBHm_Chr5g0067621
rosa_laevigata	RLG00000019313 RLG00000019320
rosa_multiflora	Rmu_sc0000886.1_g000004 Rmu_sc0001962.1_g000037 Rmu_sc0002000.1_g000006 Rmu_sc0003499.1_g000021
rosa_roxburghii	Rroxscaffold_2G00111310 Rroxscaffold_2G00111340
rosa_rugosa	Rorug02G0310400 Rorug02G0310500 Rorug02G0310700 Rorug02G0310800
rosa_samantha	Rh1AG154300 Rh1CG145100 Rh2AG275800 Rh2AG362900 Rh2AG363200 Rh2BG368400 Rh2BG368700 Rh2CG346100 Rh2CG346400 Rh2DG385800 Rh4AG153900 Rh4DG231500
rosa_wichuraiana	Rw2G029490 Rw2G029510 Rw4G020140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	586, 847, 1148
Acc65I	GGTACC	1 cut(s)	1797
AccB1I	GGYRCC	2 cut(s)	1484, 1797
AccI	GTMKAC	1 cut(s)	1686
AccII	CGCG	1 cut(s)	1447
AciI	CCGC	4 cut(s)	997, 1316, 1447, 1463
AclWI	GGATC	2 cut(s)	993, 1198
AcoI	YGGCCR	1 cut(s)	362
AcsI	RAATTY	2 cut(s)	455, 572
AcuI	CTGAAG	3 cut(s)	921, 1727, 1791
AcvI	CACGTG	2 cut(s)	656, 1124
AfaI	GTAC	4 cut(s)	164, 695, 777, 1799
AfiI	CCNNNNNNNGG	2 cut(s)	371, 703
AflII	CTTAAG	1 cut(s)	1622
AhdI	GACNNNNNGTC	1 cut(s)	1006
AjnI	CCWGG	1 cut(s)	1539
Alw21I	GWGCWC	1 cut(s)	655
Alw26I	GTCTC	5 cut(s)	80, 323, 572, 1014, 1150
Alw44I	GTGCAC	1 cut(s)	651
AlwI	GGATC	2 cut(s)	993, 1198
AlwNI	CAGNNNCTG	2 cut(s)	534, 1243
Ama87I	CYCGRG	1 cut(s)	1011
AoxI	GGCC	3 cut(s)	362, 819, 1014
ApaLI	GTGCAC	1 cut(s)	651
ApeKI	GCWGC	9 cut(s)	439, 548, 551, 919, 1222, 1442, 1589, 1702, 1757
ApoI	RAATTY	2 cut(s)	455, 572
Asp700I	GAANNNNTTC	3 cut(s)	291, 724, 1535
Asp718I	GGTACC	1 cut(s)	1797
AspLEI	GCGC	1 cut(s)	1447
AspS9I	GGNCC	6 cut(s)	588, 680, 820, 862, 1014, 1318
AsuC2I	CCSGG	1 cut(s)	1663
AsuHPI	GGTGA	3 cut(s)	112, 118, 701
AvaI	CYCGRG	1 cut(s)	1011
AvaII	GGWCC	4 cut(s)	588, 680, 862, 1318
BaeGI	GKGCMC	1 cut(s)	655
BalI	TGGCCA	1 cut(s)	364
BanI	GGYRCC	2 cut(s)	1484, 1797
BarI	GAAGNNNNNNTAC	2 cut(s)	140, 172
BbrPI	CACGTG	2 cut(s)	656, 1124
BbsI	GAAGAC	1 cut(s)	1080
Bbv12I	GWGCWC	1 cut(s)	655
BbvI	GCAGC	9 cut(s)	426, 535, 538, 931, 1234, 1454, 1576, 1714, 1769
BccI	CCATC	3 cut(s)	364, 1507, 1639
BceAI	ACGGC	2 cut(s)	131, 858
BciT130I	CCWGG	1 cut(s)	1541
BcnI	CCSGG	1 cut(s)	1663
BcoDI	GTCTC	5 cut(s)	80, 323, 572, 1014, 1150
BfaI	CTAG	4 cut(s)	866, 1226, 1382, 1578
BfmI	CTRYAG	2 cut(s)	440, 1109
BfrI	CTTAAG	1 cut(s)	1622
BglII	AGATCT	2 cut(s)	808, 1378
Bme1390I	CCNGG	2 cut(s)	1541, 1663
Bme18I	GGWCC	4 cut(s)	588, 680, 862, 1318
BmeRI	GACNNNNNGTC	1 cut(s)	1006
BmeT110I	CYCGRG	1 cut(s)	1011
BmgT120I	GGNCC	6 cut(s)	588, 680, 820, 862, 1014, 1318
BmiI	GGNNCC	5 cut(s)	589, 863, 1486, 1660, 1799
BmrFI	CCNGG	2 cut(s)	1541, 1663
BmsI	GCATC	6 cut(s)	113, 906, 984, 1081, 1180, 1300
BpiI	GAAGAC	1 cut(s)	1080
BplI	GAGNNNNNCTC	2 cut(s)	683, 715
BpmI	CTGGAG	2 cut(s)	556, 1073
BpuEI	CTTGAG	4 cut(s)	660, 1174, 1235, 1832
BpuMI	CCSGG	1 cut(s)	1663
BsaAI	YACGTR	2 cut(s)	656, 1124
BsaI	GGTCTC	1 cut(s)	572
BsaJI	CCNNGG	4 cut(s)	365, 583, 702, 1662
BsaWI	WCCGGW	1 cut(s)	304
Bsc4I	CCNNNNNNNGG	2 cut(s)	371, 703
Bse1I	ACTGG	5 cut(s)	193, 539, 987, 1056, 1248
Bse3DI	GCAATG	2 cut(s)	852, 1432
BseBI	CCWGG	1 cut(s)	1541
BseDI	CCNNGG	4 cut(s)	365, 583, 702, 1662
BseGI	GGATG	7 cut(s)	375, 409, 1306, 1360, 1518, 1549, 1699
BseLI	CCNNNNNNNGG	2 cut(s)	371, 703
BseMI	GCAATG	2 cut(s)	852, 1432
BseMII	CTCAG	6 cut(s)	15, 133, 600, 1359, 1410, 1547
BseNI	ACTGG	5 cut(s)	193, 539, 987, 1056, 1248
BseRI	GAGGAG	3 cut(s)	62, 306, 628
BseSI	GKGCMC	1 cut(s)	655
BseXI	GCAGC	9 cut(s)	426, 535, 538, 931, 1234, 1454, 1576, 1714, 1769
BsgI	GTGCAG	2 cut(s)	678, 770
Bsh1236I	CGCG	1 cut(s)	1447
BshFI	GGCC	3 cut(s)	364, 821, 1016
BshNI	GGYRCC	2 cut(s)	1484, 1797
BsiHKAI	GWGCWC	1 cut(s)	655
BsiHKCI	CYCGRG	1 cut(s)	1011
BsiSI	CCGG	2 cut(s)	305, 1662
BslFI	GGGAC	2 cut(s)	1013, 1679
BslI	CCNNNNNNNGG	2 cut(s)	371, 703
BsmAI	GTCTC	5 cut(s)	80, 323, 572, 1014, 1150
BsmFI	GGGAC	2 cut(s)	1013, 1679
BsmI	GAATGC	1 cut(s)	481
BsnI	GGCC	3 cut(s)	364, 821, 1016
Bso31I	GGTCTC	1 cut(s)	572
BsoBI	CYCGRG	1 cut(s)	1011
Bsp1286I	GDGCHC	1 cut(s)	655
Bsp143I	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
Bsp19I	CCATGG	1 cut(s)	365
BspACI	CCGC	4 cut(s)	997, 1316, 1447, 1463
BspANI	GGCC	3 cut(s)	364, 821, 1016
BspCNI	CTCAG	6 cut(s)	16, 132, 601, 1360, 1409, 1548
BspFNI	CGCG	1 cut(s)	1447
BspLI	GGNNCC	5 cut(s)	589, 863, 1486, 1660, 1799
BspMAI	CTGCAG	1 cut(s)	444
BspPI	GGATC	2 cut(s)	993, 1198
BspT107I	GGYRCC	2 cut(s)	1484, 1797
BspTI	CTTAAG	1 cut(s)	1622
BspTNI	GGTCTC	1 cut(s)	572
BsrDI	GCAATG	2 cut(s)	852, 1432
BsrI	ACTGG	5 cut(s)	193, 539, 987, 1056, 1248
BssECI	CCNNGG	4 cut(s)	365, 583, 702, 1662
BssMI	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
BssT1I	CCWWGG	3 cut(s)	365, 583, 702
Bst2UI	CCWGG	1 cut(s)	1541
Bst4CI	ACNGT	5 cut(s)	530, 724, 830, 1113, 1815
Bst6I	CTCTTC	3 cut(s)	12, 297, 771
BstAFI	CTTAAG	1 cut(s)	1622
BstBAI	YACGTR	2 cut(s)	656, 1124
BstC8I	GCNNGC	2 cut(s)	177, 1553
BstDSI	CCRYGG	1 cut(s)	365
BstENI	CCTNNNNNAGG	1 cut(s)	701
BstF5I	GGATG	7 cut(s)	375, 409, 1306, 1360, 1518, 1549, 1699
BstFNI	CGCG	1 cut(s)	1447
BstHHI	GCGC	1 cut(s)	1447
BstKTI	GATC	6 cut(s)	30, 271, 811, 988, 1206, 1381
BstMAI	GTCTC	5 cut(s)	80, 323, 572, 1014, 1150
BstMBI	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
BstMWI	GCNNNNNNNGC	5 cut(s)	281, 1219, 1574, 1711, 1754
BstNI	CCWGG	1 cut(s)	1541
BstNSI	RCATGY	2 cut(s)	179, 185
BstSCI	CCNGG	2 cut(s)	1539, 1661
BstSFI	CTRYAG	2 cut(s)	440, 1109
BstSLI	GKGCMC	1 cut(s)	655
BstUI	CGCG	1 cut(s)	1447
BstV1I	GCAGC	9 cut(s)	426, 535, 538, 931, 1234, 1454, 1576, 1714, 1769
BstV2I	GAAGAC	1 cut(s)	1080
BstX2I	RGATCY	3 cut(s)	808, 1203, 1378
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	3 cut(s)	808, 1203, 1378
BsuRI	GGCC	3 cut(s)	364, 821, 1016
BtgI	CCRYGG	1 cut(s)	365
BtsCI	GGATG	7 cut(s)	375, 409, 1306, 1360, 1518, 1549, 1699
BtsI	GCAGTG	2 cut(s)	88, 851
BtsIMutI	CAGTG	4 cut(s)	88, 535, 851, 1241
Cac8I	GCNNGC	2 cut(s)	177, 1553
CaiI	CAGNNNCTG	2 cut(s)	534, 1243
CfoI	GCGC	1 cut(s)	1447
Cfr13I	GGNCC	6 cut(s)	588, 680, 820, 862, 1014, 1318
CseI	GACGC	1 cut(s)	1138
Csp6I	GTAC	4 cut(s)	163, 694, 776, 1798
CspCI	CAANNNNNGTGG	2 cut(s)	544, 579
CviAII	CATG	6 cut(s)	176, 182, 366, 1034, 1608, 1635
CviQI	GTAC	4 cut(s)	163, 694, 776, 1798
DpnI	GATC	6 cut(s)	29, 270, 810, 987, 1205, 1380
DpnII	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
DrdI	GACNNNNNNGTC	3 cut(s)	586, 847, 1148
DriI	GACNNNNNGTC	1 cut(s)	1006
DseDI	GACNNNNNNGTC	3 cut(s)	586, 847, 1148
EaeI	YGGCCR	1 cut(s)	362
Eam1104I	CTCTTC	3 cut(s)	12, 297, 771
Eam1105I	GACNNNNNGTC	1 cut(s)	1006
EarI	CTCTTC	3 cut(s)	12, 297, 771
Eco130I	CCWWGG	3 cut(s)	365, 583, 702
Eco31I	GGTCTC	1 cut(s)	572
Eco32I	GATATC	1 cut(s)	1498
Eco47I	GGWCC	4 cut(s)	588, 680, 862, 1318
Eco57I	CTGAAG	3 cut(s)	921, 1727, 1791
Eco72I	CACGTG	2 cut(s)	656, 1124
Eco88I	CYCGRG	1 cut(s)	1011
EcoNI	CCTNNNNNAGG	1 cut(s)	701
EcoO109I	RGGNCCY	2 cut(s)	588, 862
EcoRII	CCWGG	1 cut(s)	1539
EcoRV	GATATC	1 cut(s)	1498
EcoT14I	CCWWGG	3 cut(s)	365, 583, 702
ErhI	CCWWGG	3 cut(s)	365, 583, 702
FaeI	CATG	6 cut(s)	179, 185, 369, 1037, 1611, 1638
FalI	AAGNNNNNCTT	2 cut(s)	1746, 1778
FaqI	GGGAC	2 cut(s)	1013, 1679
FatI	CATG	6 cut(s)	175, 181, 365, 1033, 1607, 1634
FauI	CCCGC	2 cut(s)	990, 1456
FblI	GTMKAC	1 cut(s)	1686
FokI	GGATG	7 cut(s)	382, 416, 1313, 1367, 1525, 1556, 1706
FspBI	CTAG	4 cut(s)	866, 1226, 1382, 1578
GlaI	GCGC	1 cut(s)	1446
GsuI	CTGGAG	2 cut(s)	556, 1073
HaeIII	GGCC	3 cut(s)	364, 821, 1016
HapII	CCGG	2 cut(s)	305, 1662
HgaI	GACGC	1 cut(s)	1138
HhaI	GCGC	1 cut(s)	1447
Hin1II	CATG	6 cut(s)	179, 185, 369, 1037, 1611, 1638
Hin6I	GCGC	1 cut(s)	1445
HinP1I	GCGC	1 cut(s)	1445
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HindIII	AAGCTT	3 cut(s)	891, 1064, 1712
HpaI	GTTAAC	1 cut(s)	385
HpaII	CCGG	2 cut(s)	305, 1662
HphI	GGTGA	3 cut(s)	112, 118, 701
Hpy166II	GTNNAC	4 cut(s)	385, 606, 653, 1687
Hpy188III	TCNNGA	7 cut(s)	770, 943, 1153, 1259, 1321, 1382, 1402
Hpy8I	GTNNAC	4 cut(s)	385, 606, 653, 1687
HpyAV	CCTTC	5 cut(s)	97, 1217, 1606, 1649, 1823
HpyCH4III	ACNGT	5 cut(s)	530, 724, 830, 1113, 1815
HpyCH4IV	ACGT	5 cut(s)	351, 655, 774, 1123, 1862
HpyF10VI	GCNNNNNNNGC	5 cut(s)	281, 1219, 1574, 1711, 1754
HpySE526I	ACGT	5 cut(s)	351, 655, 774, 1123, 1862
Hsp92II	CATG	6 cut(s)	179, 185, 369, 1037, 1611, 1638
HspAI	GCGC	1 cut(s)	1445
KpnI	GGTACC	1 cut(s)	1801
KspAI	GTTAAC	1 cut(s)	385
Kzo9I	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
LmnI	GCTCC	2 cut(s)	412, 1670
Lsp1109I	GCAGC	9 cut(s)	426, 535, 538, 931, 1234, 1454, 1576, 1714, 1769
LweI	GCATC	6 cut(s)	113, 906, 984, 1081, 1180, 1300
MaeI	CTAG	4 cut(s)	866, 1226, 1382, 1578
MaeII	ACGT	5 cut(s)	351, 655, 774, 1123, 1862
MaeIII	GTNAC	4 cut(s)	530, 830, 849, 927
MalI	GATC	6 cut(s)	29, 270, 810, 987, 1205, 1380
MboI	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
MfeI	CAATTG	1 cut(s)	1022
MflI	RGATCY	3 cut(s)	808, 1203, 1378
MhlI	GDGCHC	1 cut(s)	655
MlsI	TGGCCA	1 cut(s)	364
MluCI	AATT	4 cut(s)	455, 572, 1022, 1274
MluNI	TGGCCA	1 cut(s)	364
MlyI	GAGTC	4 cut(s)	29, 44, 638, 1016
Mox20I	TGGCCA	1 cut(s)	364
MroXI	GAANNNNTTC	3 cut(s)	291, 724, 1535
MscI	TGGCCA	1 cut(s)	364
MseI	TTAA	3 cut(s)	384, 1623, 1716
MslI	CAYNNNNRTG	1 cut(s)	180
Msp20I	TGGCCA	1 cut(s)	364
MspA1I	CMGCKG	1 cut(s)	1705
MspCI	CTTAAG	1 cut(s)	1622
MspI	CCGG	2 cut(s)	305, 1662
MspR9I	CCNGG	2 cut(s)	1541, 1663
MunI	CAATTG	1 cut(s)	1022
Mva1269I	GAATGC	1 cut(s)	481
MvaI	CCWGG	1 cut(s)	1541
MvnI	CGCG	1 cut(s)	1447
MwoI	GCNNNNNNNGC	5 cut(s)	281, 1219, 1574, 1711, 1754
NciI	CCSGG	1 cut(s)	1663
NcoI	CCATGG	1 cut(s)	365
NdeII	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
NlaIII	CATG	6 cut(s)	179, 185, 369, 1037, 1611, 1638
NlaIV	GGNNCC	5 cut(s)	589, 863, 1486, 1660, 1799
NmeAIII	GCCGAG	1 cut(s)	1513
NmuCI	GTSAC	3 cut(s)	530, 849, 927
NspI	RCATGY	2 cut(s)	179, 185
PaeI	GCATGC	1 cut(s)	179
PctI	GAATGC	1 cut(s)	481
PdmI	GAANNNNTTC	3 cut(s)	291, 724, 1535
PfeI	GAWTC	6 cut(s)	425, 497, 623, 948, 1255, 1627
PfoI	TCCNGGA	1 cut(s)	1539
PleI	GAGTC	4 cut(s)	28, 43, 637, 1015
PmaCI	CACGTG	2 cut(s)	656, 1124
PmlI	CACGTG	2 cut(s)	656, 1124
PpsI	GAGTC	4 cut(s)	28, 43, 637, 1015
Ppu21I	YACGTR	2 cut(s)	656, 1124
PpuMI	RGGWCCY	2 cut(s)	588, 862
Psp5II	RGGWCCY	2 cut(s)	588, 862
Psp6I	CCWGG	1 cut(s)	1539
PspCI	CACGTG	2 cut(s)	656, 1124
PspGI	CCWGG	1 cut(s)	1539
PspN4I	GGNNCC	5 cut(s)	589, 863, 1486, 1660, 1799
PspPI	GGNCC	6 cut(s)	588, 680, 820, 862, 1014, 1318
PspPPI	RGGWCCY	2 cut(s)	588, 862
PstI	CTGCAG	1 cut(s)	444
PstNI	CAGNNNCTG	2 cut(s)	534, 1243
PsuI	RGATCY	3 cut(s)	808, 1203, 1378
PvuII	CAGCTG	1 cut(s)	1705
RsaI	GTAC	4 cut(s)	164, 695, 777, 1799
RsaNI	GTAC	4 cut(s)	163, 694, 776, 1798
RseI	CAYNNNNRTG	1 cut(s)	180
SaqAI	TTAA	3 cut(s)	384, 1623, 1716
Sau3AI	GATC	6 cut(s)	27, 268, 808, 985, 1203, 1378
Sau96I	GGNCC	6 cut(s)	588, 680, 820, 862, 1014, 1318
SchI	GAGTC	4 cut(s)	29, 44, 638, 1016
ScrFI	CCNGG	2 cut(s)	1541, 1663
SduI	GDGCHC	1 cut(s)	655
SfaNI	GCATC	6 cut(s)	113, 906, 984, 1081, 1180, 1300
SfcI	CTRYAG	2 cut(s)	440, 1109
SinI	GGWCC	4 cut(s)	588, 680, 862, 1318
SmiMI	CAYNNNNRTG	1 cut(s)	180
SmlI	CTYRAG	5 cut(s)	675, 1153, 1214, 1622, 1847
SmoI	CTYRAG	5 cut(s)	675, 1153, 1214, 1622, 1847
SphI	GCATGC	1 cut(s)	179
Sse9I	AATT	4 cut(s)	455, 572, 1022, 1274
SsiI	CCGC	4 cut(s)	997, 1316, 1447, 1463
SspMI	CTAG	4 cut(s)	866, 1226, 1382, 1578
StyD4I	CCNGG	2 cut(s)	1539, 1661
StyI	CCWWGG	3 cut(s)	365, 583, 702
TaaI	ACNGT	5 cut(s)	530, 724, 830, 1113, 1815
TaiI	ACGT	5 cut(s)	354, 658, 777, 1126, 1865
TaqI	TCGA	2 cut(s)	489, 500
TasI	AATT	4 cut(s)	455, 572, 1022, 1274
TatI	WGTACW	1 cut(s)	162
TauI	GCSGC	1 cut(s)	1450
TfiI	GAWTC	6 cut(s)	425, 497, 623, 948, 1255, 1627
Tru1I	TTAA	3 cut(s)	384, 1623, 1716
Tru9I	TTAA	3 cut(s)	384, 1623, 1716
TscAI	CASTG	4 cut(s)	88, 535, 858, 1248
TseFI	GTSAC	3 cut(s)	530, 849, 927
TseI	GCWGC	9 cut(s)	439, 548, 551, 919, 1222, 1442, 1589, 1702, 1757
Tsp45I	GTSAC	3 cut(s)	530, 849, 927
TspGWI	ACGGA	2 cut(s)	416, 1683
TspRI	CASTG	4 cut(s)	88, 535, 858, 1248
Vha464I	CTTAAG	1 cut(s)	1622
VneI	GTGCAC	1 cut(s)	651
VpaK11BI	GGWCC	4 cut(s)	588, 680, 862, 1318
XagI	CCTNNNNNAGG	1 cut(s)	701
XapI	RAATTY	2 cut(s)	455, 572
XbaI	TCTAGA	1 cut(s)	1381
XceI	RCATGY	2 cut(s)	179, 185
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1240
XmiI	GTMKAC	1 cut(s)	1686
XmnI	GAANNNNTTC	3 cut(s)	291, 724, 1535
XspI	CTAG	4 cut(s)	866, 1226, 1382, 1578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.