XH domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15910 AT4G00380 AT4G00380 AT4G00380 |
| fragaria_vesca | FvH4_6g28780 FvH4_6g28780 FvH4_6g28780 FvH4_6g28780 |
| malus_domestica | MD09G1224300.v1.1 MD17G1221900.v1.1 MD17G1222100.v1.1 |
| prunus_persica | Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0133161 RchiOBHm_Chr2g0133201 RchiOBHm_Chr5g0067621 |
| rosa_laevigata | RLG00000019313 RLG00000019320 |
| rosa_multiflora | Rmu_sc0000886.1_g000004 Rmu_sc0001962.1_g000037 Rmu_sc0002000.1_g000006 Rmu_sc0003499.1_g000021 |
| rosa_roxburghii | Rroxscaffold_2G00111310 Rroxscaffold_2G00111340 |
| rosa_rugosa | Rorug02G0310400 Rorug02G0310500 Rorug02G0310700 Rorug02G0310800 |
| rosa_samantha | Rh1AG154300 Rh1CG145100 Rh2AG275800 Rh2AG362900 Rh2AG363200 Rh2BG368400 Rh2BG368700 Rh2CG346100 Rh2CG346400 Rh2DG385800 Rh4AG153900 Rh4DG231500 |
| rosa_wichuraiana | Rw2G029490 Rw2G029510 Rw4G020140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1358 |
| AclWI | GGATC | 2 cut(s) | 408, 1212 |
| AcoI | YGGCCR | 2 cut(s) | 162, 675 |
| AcsI | RAATTY | 2 cut(s) | 1531, 1723 |
| AcuI | CTGAAG | 2 cut(s) | 414, 1640 |
| AcvI | CACGTG | 1 cut(s) | 560 |
| AfaI | GTAC | 4 cut(s) | 731, 737, 1466, 1685 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 160, 247, 278, 310 |
| AflIII | ACRYGT | 2 cut(s) | 264, 410 |
| AgsI | TTSAA | 8 cut(s) | 482, 721, 1070, 1163, 1226, 1447, 1552, 1753 |
| AjnI | CCWGG | 2 cut(s) | 642, 914 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 869, 901 |
| AluBI | AGCT | 5 cut(s) | 29, 407, 653, 787, 1022 |
| AluI | AGCT | 5 cut(s) | 29, 407, 653, 787, 1022 |
| Alw21I | GWGCWC | 2 cut(s) | 31, 559 |
| Alw26I | GTCTC | 2 cut(s) | 170, 955 |
| Alw44I | GTGCAC | 1 cut(s) | 555 |
| AlwI | GGATC | 2 cut(s) | 408, 1212 |
| Ama87I | CYCGRG | 1 cut(s) | 1577 |
| AoxI | GGCC | 5 cut(s) | 162, 269, 584, 675, 1491 |
| ApaLI | GTGCAC | 1 cut(s) | 555 |
| ApeKI | GCWGC | 2 cut(s) | 650, 1573 |
| ApoI | RAATTY | 2 cut(s) | 1531, 1723 |
| AseI | ATTAAT | 1 cut(s) | 1361 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1006, 1439 |
| AspS9I | GGNCC | 2 cut(s) | 313, 584 |
| AsuC2I | CCSGG | 1 cut(s) | 531 |
| AsuHPI | GGTGA | 5 cut(s) | 143, 230, 1198, 1303, 1433 |
| AvaI | CYCGRG | 1 cut(s) | 1577 |
| AvaII | GGWCC | 1 cut(s) | 313 |
| BaeGI | GKGCMC | 2 cut(s) | 559, 1637 |
| BalI | TGGCCA | 2 cut(s) | 164, 677 |
| BanII | GRGCYC | 2 cut(s) | 31, 536 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 53, 85 |
| BbrPI | CACGTG | 1 cut(s) | 560 |
| BbsI | GAAGAC | 1 cut(s) | 752 |
| Bbv12I | GWGCWC | 2 cut(s) | 31, 559 |
| BbvI | GCAGC | 2 cut(s) | 662, 1585 |
| BccI | CCATC | 1 cut(s) | 173 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1209, 1243 |
| BciT130I | CCWGG | 2 cut(s) | 644, 916 |
| BciVI | GTATCC | 1 cut(s) | 640 |
| BcnI | CCSGG | 1 cut(s) | 531 |
| BcoDI | GTCTC | 2 cut(s) | 170, 955 |
| BfaI | CTAG | 2 cut(s) | 185, 683 |
| BfuAI | ACCTGC | 1 cut(s) | 1358 |
| BfuI | GTATCC | 1 cut(s) | 640 |
| BglII | AGATCT | 2 cut(s) | 256, 322 |
| BisI | GCNGC | 2 cut(s) | 651, 1574 |
| BlsI | GCNGC | 2 cut(s) | 652, 1575 |
| Bme1390I | CCNGG | 3 cut(s) | 531, 644, 916 |
| Bme18I | GGWCC | 1 cut(s) | 313 |
| BmeT110I | CYCGRG | 1 cut(s) | 1577 |
| BmgT120I | GGNCC | 2 cut(s) | 313, 584 |
| BmiI | GGNNCC | 1 cut(s) | 315 |
| BmrFI | CCNGG | 3 cut(s) | 531, 644, 916 |
| BpiI | GAAGAC | 1 cut(s) | 752 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1748, 1780 |
| BpmI | CTGGAG | 2 cut(s) | 123, 937 |
| Bpu10I | CCTNAGC | 1 cut(s) | 111 |
| BpuEI | CTTGAG | 6 cut(s) | 520, 1078, 1133, 1298, 1493, 1778 |
| BpuMI | CCSGG | 1 cut(s) | 531 |
| BsaAI | YACGTR | 2 cut(s) | 265, 560 |
| BsaBI | GATNNNNATC | 2 cut(s) | 570, 1428 |
| BsaJI | CCNNGG | 4 cut(s) | 159, 272, 580, 1578 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 160, 247, 278, 310 |
| Bse1I | ACTGG | 5 cut(s) | 215, 283, 344, 448, 616 |
| Bse3DI | GCAATG | 2 cut(s) | 285, 1336 |
| Bse8I | GATNNNNATC | 2 cut(s) | 570, 1428 |
| BseBI | CCWGG | 2 cut(s) | 644, 916 |
| BseDI | CCNNGG | 4 cut(s) | 159, 272, 580, 1578 |
| BseGI | GGATG | 4 cut(s) | 771, 1099, 1138, 1543 |
| BseJI | GATNNNNATC | 2 cut(s) | 570, 1428 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 160, 247, 278, 310 |
| BseMI | GCAATG | 2 cut(s) | 285, 1336 |
| BseMII | CTCAG | 5 cut(s) | 46, 942, 1017, 1560, 1601 |
| BseNI | ACTGG | 5 cut(s) | 215, 283, 344, 448, 616 |
| BseRI | GAGGAG | 1 cut(s) | 1043 |
| BseSI | GKGCMC | 2 cut(s) | 559, 1637 |
| BseXI | GCAGC | 2 cut(s) | 662, 1585 |
| BshFI | GGCC | 5 cut(s) | 164, 271, 586, 677, 1493 |
| BsiHKAI | GWGCWC | 2 cut(s) | 31, 559 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1577 |
| BsiSI | CCGG | 1 cut(s) | 530 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 160, 247, 278, 310 |
| BsmAI | GTCTC | 2 cut(s) | 170, 955 |
| BsmI | GAATGC | 1 cut(s) | 460 |
| BsnI | GGCC | 5 cut(s) | 164, 271, 586, 677, 1493 |
| BsoBI | CYCGRG | 1 cut(s) | 1577 |
| Bsp1286I | GDGCHC | 4 cut(s) | 31, 536, 559, 1637 |
| BspANI | GGCC | 5 cut(s) | 164, 271, 586, 677, 1493 |
| BspCNI | CTCAG | 5 cut(s) | 45, 943, 1018, 1561, 1602 |
| BspHI | TCATGA | 1 cut(s) | 880 |
| BspLI | GGNNCC | 1 cut(s) | 315 |
| BspMI | ACCTGC | 1 cut(s) | 1358 |
| BspPI | GGATC | 2 cut(s) | 408, 1212 |
| BsrDI | GCAATG | 2 cut(s) | 285, 1336 |
| BsrI | ACTGG | 5 cut(s) | 215, 283, 344, 448, 616 |
| BssECI | CCNNGG | 4 cut(s) | 159, 272, 580, 1578 |
| BssT1I | CCWWGG | 3 cut(s) | 159, 272, 580 |
| Bst2UI | CCWGG | 2 cut(s) | 644, 916 |
| Bst4CI | ACNGT | 7 cut(s) | 87, 497, 628, 729, 1464, 1564, 1719 |
| Bst6I | CTCTTC | 2 cut(s) | 390, 1158 |
| BstBAI | YACGTR | 2 cut(s) | 265, 560 |
| BstC8I | GCNNGC | 4 cut(s) | 96, 1351, 1453, 1491 |
| BstDEI | CTNAG | 6 cut(s) | 32, 111, 951, 1026, 1569, 1610 |
| BstF5I | GGATG | 4 cut(s) | 771, 1099, 1138, 1543 |
| BstMAI | GTCTC | 2 cut(s) | 170, 955 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 194, 413, 683 |
| BstNI | CCWGG | 2 cut(s) | 644, 916 |
| BstNSI | RCATGY | 3 cut(s) | 98, 414, 1455 |
| BstSCI | CCNGG | 3 cut(s) | 529, 642, 914 |
| BstSLI | GKGCMC | 2 cut(s) | 559, 1637 |
| BstV1I | GCAGC | 2 cut(s) | 662, 1585 |
| BstV2I | GAAGAC | 1 cut(s) | 752 |
| BstX2I | RGATCY | 2 cut(s) | 256, 322 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 172 |
| BstYI | RGATCY | 2 cut(s) | 256, 322 |
| BsuI | GTATCC | 1 cut(s) | 640 |
| BsuRI | GGCC | 5 cut(s) | 164, 271, 586, 677, 1493 |
| BtsCI | GGATG | 4 cut(s) | 771, 1099, 1138, 1543 |
| BtsIMutI | CAGTG | 2 cut(s) | 944, 1635 |
| BveI | ACCTGC | 1 cut(s) | 1358 |
| Cac8I | GCNNGC | 4 cut(s) | 96, 1351, 1453, 1491 |
| CciI | TCATGA | 1 cut(s) | 880 |
| Cfr13I | GGNCC | 2 cut(s) | 313, 584 |
| CseI | GACGC | 1 cut(s) | 87 |
| Csp6I | GTAC | 4 cut(s) | 730, 736, 1465, 1684 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1675, 1710 |
| CviAII | CATG | 4 cut(s) | 95, 411, 881, 1452 |
| CviQI | GTAC | 4 cut(s) | 730, 736, 1465, 1684 |
| DdeI | CTNAG | 6 cut(s) | 32, 111, 951, 1026, 1569, 1610 |
| DraI | TTTAAA | 2 cut(s) | 1729, 1776 |
| EaeI | YGGCCR | 2 cut(s) | 162, 675 |
| Eam1104I | CTCTTC | 2 cut(s) | 390, 1158 |
| EarI | CTCTTC | 2 cut(s) | 390, 1158 |
| Ecl136II | GAGCTC | 1 cut(s) | 29 |
| Eco130I | CCWWGG | 3 cut(s) | 159, 272, 580 |
| Eco147I | AGGCCT | 1 cut(s) | 1493 |
| Eco24I | GRGCYC | 2 cut(s) | 31, 536 |
| Eco47I | GGWCC | 1 cut(s) | 313 |
| Eco53kI | GAGCTC | 1 cut(s) | 29 |
| Eco57I | CTGAAG | 2 cut(s) | 414, 1640 |
| Eco72I | CACGTG | 1 cut(s) | 560 |
| Eco88I | CYCGRG | 1 cut(s) | 1577 |
| EcoICRI | GAGCTC | 1 cut(s) | 29 |
| EcoO109I | RGGNCCY | 1 cut(s) | 313 |
| EcoRII | CCWGG | 2 cut(s) | 642, 914 |
| EcoT14I | CCWWGG | 3 cut(s) | 159, 272, 580 |
| EcoT38I | GRGCYC | 2 cut(s) | 31, 536 |
| ErhI | CCWWGG | 3 cut(s) | 159, 272, 580 |
| FaeI | CATG | 4 cut(s) | 98, 414, 884, 1455 |
| FatI | CATG | 4 cut(s) | 94, 410, 880, 1451 |
| Fnu4HI | GCNGC | 2 cut(s) | 651, 1574 |
| FokI | GGATG | 4 cut(s) | 778, 1106, 1145, 1530 |
| FriOI | GRGCYC | 2 cut(s) | 31, 536 |
| Fsp4HI | GCNGC | 2 cut(s) | 651, 1574 |
| FspBI | CTAG | 2 cut(s) | 185, 683 |
| GluI | GCNGC | 2 cut(s) | 651, 1574 |
| GsuI | CTGGAG | 2 cut(s) | 123, 937 |
| HaeIII | GGCC | 5 cut(s) | 164, 271, 586, 677, 1493 |
| HapII | CCGG | 1 cut(s) | 530 |
| HgaI | GACGC | 1 cut(s) | 87 |
| Hin1II | CATG | 4 cut(s) | 98, 414, 884, 1455 |
| HincII | GTYRAC | 1 cut(s) | 702 |
| HindII | GTYRAC | 1 cut(s) | 702 |
| HinfI | GANTC | 3 cut(s) | 329, 877, 1289 |
| HpaII | CCGG | 1 cut(s) | 530 |
| HphI | GGTGA | 5 cut(s) | 143, 230, 1198, 1303, 1433 |
| Hpy166II | GTNNAC | 4 cut(s) | 390, 424, 557, 702 |
| Hpy188I | TCNGA | 7 cut(s) | 35, 634, 1027, 1434, 1527, 1537, 1620 |
| Hpy8I | GTNNAC | 4 cut(s) | 390, 424, 557, 702 |
| HpyAV | CCTTC | 9 cut(s) | 136, 241, 342, 1450, 1504, 1615, 1727, 1731, 1747 |
| HpyCH4III | ACNGT | 7 cut(s) | 87, 497, 628, 729, 1464, 1564, 1719 |
| HpyCH4IV | ACGT | 4 cut(s) | 264, 559, 937, 1748 |
| HpyCH4V | TGCA | 6 cut(s) | 290, 434, 557, 1220, 1455, 1489 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 194, 413, 683 |
| HpyF3I | CTNAG | 6 cut(s) | 32, 111, 951, 1026, 1569, 1610 |
| HpySE526I | ACGT | 4 cut(s) | 264, 559, 937, 1748 |
| Hsp92II | CATG | 4 cut(s) | 98, 414, 884, 1455 |
| LmnI | GCTCC | 4 cut(s) | 26, 918, 1030, 1511 |
| Lsp1109I | GCAGC | 2 cut(s) | 662, 1585 |
| MaeI | CTAG | 2 cut(s) | 185, 683 |
| MaeII | ACGT | 4 cut(s) | 264, 559, 937, 1748 |
| MaeIII | GTNAC | 4 cut(s) | 1338, 1558, 1564, 1657 |
| MfeI | CAATTG | 1 cut(s) | 588 |
| MflI | RGATCY | 2 cut(s) | 256, 322 |
| MhlI | GDGCHC | 4 cut(s) | 31, 536, 559, 1637 |
| MlsI | TGGCCA | 2 cut(s) | 164, 677 |
| MluNI | TGGCCA | 2 cut(s) | 164, 677 |
| MmeI | TCCRAC | 4 cut(s) | 657, 867, 1110, 1128 |
| Mox20I | TGGCCA | 2 cut(s) | 164, 677 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1006, 1439 |
| MscI | TGGCCA | 2 cut(s) | 164, 677 |
| Msp20I | TGGCCA | 2 cut(s) | 164, 677 |
| MspI | CCGG | 1 cut(s) | 530 |
| MspR9I | CCNGG | 3 cut(s) | 531, 644, 916 |
| MunI | CAATTG | 1 cut(s) | 588 |
| Mva1269I | GAATGC | 1 cut(s) | 460 |
| MvaI | CCWGG | 2 cut(s) | 644, 916 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 194, 413, 683 |
| NciI | CCSGG | 1 cut(s) | 531 |
| NlaIII | CATG | 4 cut(s) | 98, 414, 884, 1455 |
| NlaIV | GGNNCC | 1 cut(s) | 315 |
| NmuCI | GTSAC | 1 cut(s) | 1657 |
| NspI | RCATGY | 3 cut(s) | 98, 414, 1455 |
| PaeI | GCATGC | 2 cut(s) | 98, 1455 |
| PagI | TCATGA | 1 cut(s) | 880 |
| PceI | AGGCCT | 1 cut(s) | 1493 |
| PciI | ACATGT | 1 cut(s) | 410 |
| PctI | GAATGC | 1 cut(s) | 460 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1006, 1439 |
| PfeI | GAWTC | 3 cut(s) | 329, 877, 1289 |
| PflFI | GACNNNGTC | 2 cut(s) | 638, 751 |
| PfoI | TCCNGGA | 1 cut(s) | 642 |
| PkrI | GCNGC | 2 cut(s) | 652, 1575 |
| PmaCI | CACGTG | 1 cut(s) | 560 |
| PmlI | CACGTG | 1 cut(s) | 560 |
| Ppu21I | YACGTR | 2 cut(s) | 265, 560 |
| PpuMI | RGGWCCY | 1 cut(s) | 313 |
| PscI | ACATGT | 1 cut(s) | 410 |
| PshBI | ATTAAT | 1 cut(s) | 1361 |
| Psp124BI | GAGCTC | 1 cut(s) | 31 |
| Psp5II | RGGWCCY | 1 cut(s) | 313 |
| Psp6I | CCWGG | 2 cut(s) | 642, 914 |
| PspCI | CACGTG | 1 cut(s) | 560 |
| PspGI | CCWGG | 2 cut(s) | 642, 914 |
| PspN4I | GGNNCC | 1 cut(s) | 315 |
| PspPI | GGNCC | 2 cut(s) | 313, 584 |
| PspPPI | RGGWCCY | 1 cut(s) | 313 |
| PsuI | RGATCY | 2 cut(s) | 256, 322 |
| PsyI | GACNNNGTC | 2 cut(s) | 638, 751 |
| RsaI | GTAC | 4 cut(s) | 731, 737, 1466, 1685 |
| RsaNI | GTAC | 4 cut(s) | 730, 736, 1465, 1684 |
| SacI | GAGCTC | 1 cut(s) | 31 |
| SatI | GCNGC | 2 cut(s) | 651, 1574 |
| Sau96I | GGNCC | 2 cut(s) | 313, 584 |
| ScrFI | CCNGG | 3 cut(s) | 531, 644, 916 |
| SduI | GDGCHC | 4 cut(s) | 31, 536, 559, 1637 |
| SinI | GGWCC | 1 cut(s) | 313 |
| SmlI | CTYRAG | 6 cut(s) | 535, 1057, 1112, 1277, 1472, 1793 |
| SmoI | CTYRAG | 6 cut(s) | 535, 1057, 1112, 1277, 1472, 1793 |
| SphI | GCATGC | 2 cut(s) | 98, 1455 |
| SseBI | AGGCCT | 1 cut(s) | 1493 |
| SspI | AATATT | 1 cut(s) | 855 |
| SspMI | CTAG | 2 cut(s) | 185, 683 |
| SstI | GAGCTC | 1 cut(s) | 31 |
| StuI | AGGCCT | 1 cut(s) | 1493 |
| StyD4I | CCNGG | 3 cut(s) | 529, 642, 914 |
| StyI | CCWWGG | 3 cut(s) | 159, 272, 580 |
| TaaI | ACNGT | 7 cut(s) | 87, 497, 628, 729, 1464, 1564, 1719 |
| TaiI | ACGT | 4 cut(s) | 267, 562, 940, 1751 |
| TaqI | TCGA | 5 cut(s) | 334, 403, 1229, 1393, 1428 |
| TatI | WGTACW | 3 cut(s) | 729, 735, 1683 |
| TfiI | GAWTC | 3 cut(s) | 329, 877, 1289 |
| TscAI | CASTG | 2 cut(s) | 951, 1642 |
| TseFI | GTSAC | 1 cut(s) | 1657 |
| TseI | GCWGC | 2 cut(s) | 650, 1573 |
| Tsp45I | GTSAC | 1 cut(s) | 1657 |
| TspDTI | ATGAA | 5 cut(s) | 368, 723, 1205, 1266, 1287 |
| TspRI | CASTG | 2 cut(s) | 951, 1642 |
| Tth111I | GACNNNGTC | 2 cut(s) | 638, 751 |
| VneI | GTGCAC | 1 cut(s) | 555 |
| VpaK11BI | GGWCC | 1 cut(s) | 313 |
| VspI | ATTAAT | 1 cut(s) | 1361 |
| XapI | RAATTY | 2 cut(s) | 1531, 1723 |
| XceI | RCATGY | 3 cut(s) | 98, 414, 1455 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 98, 587 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1006, 1439 |
| XspI | CTAG | 2 cut(s) | 185, 683 |