XH domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15910 AT4G00380 AT4G00380 AT4G00380 |
| fragaria_vesca | FvH4_6g28780 FvH4_6g28780 FvH4_6g28780 FvH4_6g28780 |
| malus_domestica | MD09G1224300.v1.1 MD17G1221900.v1.1 MD17G1222100.v1.1 |
| prunus_persica | Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1 Prupe.3G097000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0133161 RchiOBHm_Chr2g0133201 RchiOBHm_Chr5g0067621 |
| rosa_laevigata | RLG00000019313 RLG00000019320 |
| rosa_multiflora | Rmu_sc0000886.1_g000004 Rmu_sc0001962.1_g000037 Rmu_sc0002000.1_g000006 Rmu_sc0003499.1_g000021 |
| rosa_roxburghii | Rroxscaffold_2G00111310 Rroxscaffold_2G00111340 |
| rosa_rugosa | Rorug02G0310400 Rorug02G0310500 Rorug02G0310700 Rorug02G0310800 |
| rosa_samantha | Rh1AG154300 Rh1CG145100 Rh2AG275800 Rh2AG362900 Rh2AG363200 Rh2BG368400 Rh2BG368700 Rh2CG346100 Rh2CG346400 Rh2DG385800 Rh4AG153900 Rh4DG231500 |
| rosa_wichuraiana | Rw2G029490 Rw2G029510 Rw4G020140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 11, 86 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 86, 118 |
| AluBI | AGCT | 2 cut(s) | 124, 197 |
| AluI | AGCT | 2 cut(s) | 124, 197 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 219 |
| AspLEI | GCGC | 1 cut(s) | 171 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 151 |
| BbsI | GAAGAC | 1 cut(s) | 93 |
| BceAI | ACGGC | 1 cut(s) | 53 |
| BclI | TGATCA | 1 cut(s) | 156 |
| BfmI | CTRYAG | 1 cut(s) | 231 |
| BfoI | RGCGCY | 1 cut(s) | 172 |
| BmsI | GCATC | 1 cut(s) | 52 |
| BpiI | GAAGAC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 146 |
| BsaWI | WCCGGW | 1 cut(s) | 208 |
| Bse3DI | GCAATG | 1 cut(s) | 184 |
| BseGI | GGATG | 1 cut(s) | 58 |
| BseMI | GCAATG | 1 cut(s) | 184 |
| BsgI | GTGCAG | 1 cut(s) | 189 |
| BsiSI | CCGG | 1 cut(s) | 209 |
| Bsp143I | GATC | 1 cut(s) | 156 |
| BsrDI | GCAATG | 1 cut(s) | 184 |
| BssMI | GATC | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 58 |
| BstH2I | RGCGCY | 1 cut(s) | 172 |
| BstHHI | GCGC | 1 cut(s) | 171 |
| BstKTI | GATC | 1 cut(s) | 159 |
| BstMBI | GATC | 1 cut(s) | 156 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstSFI | CTRYAG | 1 cut(s) | 231 |
| BstV2I | GAAGAC | 1 cut(s) | 93 |
| BtsCI | GGATG | 1 cut(s) | 58 |
| CfoI | GCGC | 1 cut(s) | 171 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 3 cut(s) | 68, 124, 197 |
| CviKI_1 | RGCY | 3 cut(s) | 68, 124, 197 |
| DpnI | GATC | 1 cut(s) | 158 |
| DpnII | GATC | 1 cut(s) | 156 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 1 cut(s) | 92 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 204, 236 |
| FatI | CATG | 1 cut(s) | 90 |
| FbaI | TGATCA | 1 cut(s) | 156 |
| FokI | GGATG | 1 cut(s) | 65 |
| GlaI | GCGC | 1 cut(s) | 170 |
| HaeII | RGCGCY | 1 cut(s) | 172 |
| HapII | CCGG | 1 cut(s) | 209 |
| HhaI | GCGC | 1 cut(s) | 171 |
| Hin1II | CATG | 1 cut(s) | 94 |
| Hin6I | GCGC | 1 cut(s) | 169 |
| HinP1I | GCGC | 1 cut(s) | 169 |
| HinfI | GANTC | 2 cut(s) | 94, 145 |
| HpaII | CCGG | 1 cut(s) | 209 |
| HphI | GGTGA | 2 cut(s) | 46, 151 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 98 |
| HpyCH4V | TGCA | 1 cut(s) | 206 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| HspAI | GCGC | 1 cut(s) | 169 |
| Ksp22I | TGATCA | 1 cut(s) | 156 |
| Kzo9I | GATC | 1 cut(s) | 156 |
| LpnPI | CCDG | 2 cut(s) | 185, 222 |
| LweI | GCATC | 1 cut(s) | 52 |
| MaeIII | GTNAC | 1 cut(s) | 186 |
| MalI | GATC | 1 cut(s) | 158 |
| MboI | GATC | 1 cut(s) | 156 |
| MboII | GAAGA | 5 cut(s) | 23, 68, 91, 98, 224 |
| MluCI | AATT | 4 cut(s) | 6, 14, 26, 101 |
| MnlI | CCTC | 1 cut(s) | 25 |
| MroXI | GAANNNNTTC | 1 cut(s) | 219 |
| MseI | TTAA | 3 cut(s) | 17, 72, 117 |
| MspI | CCGG | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NdeII | GATC | 1 cut(s) | 156 |
| NlaIII | CATG | 1 cut(s) | 94 |
| PdmI | GAANNNNTTC | 1 cut(s) | 219 |
| PfeI | GAWTC | 2 cut(s) | 94, 145 |
| SaqAI | TTAA | 3 cut(s) | 17, 72, 117 |
| Sau3AI | GATC | 1 cut(s) | 156 |
| SetI | ASST | 3 cut(s) | 36, 126, 199 |
| SfaNI | GCATC | 1 cut(s) | 52 |
| SfcI | CTRYAG | 1 cut(s) | 231 |
| SgeI | CNNG | 7 cut(s) | 59, 103, 110, 137, 184, 203, 221 |
| SmlI | CTYRAG | 1 cut(s) | 125 |
| SmoI | CTYRAG | 1 cut(s) | 125 |
| Sse9I | AATT | 4 cut(s) | 6, 14, 26, 101 |
| TasI | AATT | 4 cut(s) | 6, 14, 26, 101 |
| TfiI | GAWTC | 2 cut(s) | 94, 145 |
| Tru1I | TTAA | 3 cut(s) | 17, 72, 117 |
| Tru9I | TTAA | 3 cut(s) | 17, 72, 117 |
| TspDTI | ATGAA | 4 cut(s) | 53, 69, 78, 107 |
| XmnI | GAANNNNTTC | 1 cut(s) | 219 |